Metagenome / Metatranscriptome Family F062063

Basic Information
Family ID	F062063
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	42 residues
Representative Sequence	KIGTVHSCLKEGCDWEKLVPEAQPQTQPEEAPVPVAAKS
Number of Associated Samples	113
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Bacteria (97.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.954 % of family members)
Environment Ontology (ENVO)	Unclassified (26.718 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.962 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 0.00% Coil/Unstructured: 86.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02899	Phage_int_SAM_1	86.26
PF11695	DUF3291	1.53
PF00085	Thioredoxin	0.76
PF13365	Trypsin_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	86.26
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	86.26

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.71 %
Unclassified	root	N/A	1.53 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.37 %
Unclassified	root	N/A	1.53 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.29 %
Unclassified	root	N/A	1.53 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.29 %
Unclassified	root	N/A	1.53 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.29 %
Unclassified	root	N/A	1.53 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10366492	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300002245\|JGIcombinedJ26739_100966587	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300002561\|JGI25384J37096_10262007	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300002914\|JGI25617J43924_10007898	All Organisms → cellular organisms → Bacteria → Acidobacteria	3372	Open in IMG/M
3300002914\|JGI25617J43924_10227595	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300003220\|JGI26342J46808_1004653	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300003372\|JGI26336J50218_1007457	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300004082\|Ga0062384_100071186	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300004091\|Ga0062387_100067558	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300004092\|Ga0062389_102594657	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300004633\|Ga0066395_10059070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1727	Open in IMG/M
3300005177\|Ga0066690_10913837	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005180\|Ga0066685_10030962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3311	Open in IMG/M
3300005181\|Ga0066678_10120883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1609	Open in IMG/M
3300005555\|Ga0066692_10251236	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005557\|Ga0066704_10261623	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005558\|Ga0066698_10455012	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005566\|Ga0066693_10086932	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005569\|Ga0066705_10086967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1835	Open in IMG/M
3300005591\|Ga0070761_10788184	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005602\|Ga0070762_10919621	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005764\|Ga0066903_105430956	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006046\|Ga0066652_100336707	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300006050\|Ga0075028_100698699	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006050\|Ga0075028_100917709	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006174\|Ga0075014_100772745	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006176\|Ga0070765_100527388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300006796\|Ga0066665_10594793	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300007265\|Ga0099794_10123508	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300009088\|Ga0099830_11266122	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009089\|Ga0099828_11736303	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300009090\|Ga0099827_11132915	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010326\|Ga0134065_10236037	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300010880\|Ga0126350_10605074	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300011082\|Ga0138526_1153779	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300011269\|Ga0137392_10020744	All Organisms → cellular organisms → Bacteria	4606	Open in IMG/M
3300011270\|Ga0137391_11338965	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012189\|Ga0137388_10868970	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012199\|Ga0137383_10342663	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012200\|Ga0137382_10044694	All Organisms → cellular organisms → Bacteria → Acidobacteria	2737	Open in IMG/M
3300012202\|Ga0137363_10159457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1779	Open in IMG/M
3300012202\|Ga0137363_10551526	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012203\|Ga0137399_10035827	All Organisms → cellular organisms → Bacteria	3474	Open in IMG/M
3300012205\|Ga0137362_10432028	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300012205\|Ga0137362_10655124	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012209\|Ga0137379_11187125	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012210\|Ga0137378_10421642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300012349\|Ga0137387_10142888	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300012349\|Ga0137387_10491115	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012356\|Ga0137371_10546624	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012361\|Ga0137360_10348758	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300012361\|Ga0137360_11015403	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300012361\|Ga0137360_11498006	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012924\|Ga0137413_10377275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300012925\|Ga0137419_10644866	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012925\|Ga0137419_11931690	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012930\|Ga0137407_10866953	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300012930\|Ga0137407_11722855	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012960\|Ga0164301_10214502	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012977\|Ga0134087_10211656	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300014150\|Ga0134081_10037479	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300014150\|Ga0134081_10283412	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300015053\|Ga0137405_1094554	All Organisms → cellular organisms → Bacteria → Acidobacteria	2608	Open in IMG/M
3300015053\|Ga0137405_1094557	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300015054\|Ga0137420_1263719	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300015356\|Ga0134073_10050383	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300015356\|Ga0134073_10195641	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300015357\|Ga0134072_10187640	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300016357\|Ga0182032_11541878	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300017659\|Ga0134083_10159901	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300017823\|Ga0187818_10073869	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300017930\|Ga0187825_10348888	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300018060\|Ga0187765_10152870	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300020034\|Ga0193753_10050403	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300020060\|Ga0193717_1158444	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300020580\|Ga0210403_10157948	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300020580\|Ga0210403_10908669	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300020581\|Ga0210399_10183441	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300021086\|Ga0179596_10721446	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300021088\|Ga0210404_10550472	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300021181\|Ga0210388_10247047	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300021405\|Ga0210387_10693030	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300021474\|Ga0210390_10400457	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	1160	Open in IMG/M
3300021477\|Ga0210398_10547644	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300021479\|Ga0210410_11235013	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300021559\|Ga0210409_10382298	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300021559\|Ga0210409_10573407	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300021559\|Ga0210409_10739792	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300021559\|Ga0210409_10859664	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300021559\|Ga0210409_11222979	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300021560\|Ga0126371_12934696	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300024179\|Ga0247695_1035860	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300025898\|Ga0207692_10990334	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300025906\|Ga0207699_11361799	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300026281\|Ga0209863_10092420	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300026305\|Ga0209688_1025557	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300026313\|Ga0209761_1342926	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026324\|Ga0209470_1349341	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300026335\|Ga0209804_1308295	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300026532\|Ga0209160_1342504	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026538\|Ga0209056_10379526	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300026557\|Ga0179587_10390302	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300027174\|Ga0207948_1024778	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300027559\|Ga0209222_1122758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027671\|Ga0209588_1008935	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300027737\|Ga0209038_10028808	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300027748\|Ga0209689_1202301	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300027853\|Ga0209274_10605943	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027862\|Ga0209701_10459082	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027898\|Ga0209067_10032904	All Organisms → cellular organisms → Bacteria → Acidobacteria	2646	Open in IMG/M
3300027908\|Ga0209006_10390534	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300028047\|Ga0209526_10494715	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300028047\|Ga0209526_10747872	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300029636\|Ga0222749_10780875	Not Available	523	Open in IMG/M
3300030580\|Ga0311355_10183112	All Organisms → cellular organisms → Bacteria → Acidobacteria	2213	Open in IMG/M
3300030693\|Ga0302313_10388212	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300030991\|Ga0073994_12134897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031546\|Ga0318538_10397394	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031718\|Ga0307474_10556403	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300031753\|Ga0307477_10475919	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031754\|Ga0307475_11015438	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031763\|Ga0318537_10021963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2226	Open in IMG/M
3300031768\|Ga0318509_10395215	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031780\|Ga0318508_1022640	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300031795\|Ga0318557_10059095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1632	Open in IMG/M
3300031946\|Ga0310910_10058632	All Organisms → cellular organisms → Bacteria → Acidobacteria	2739	Open in IMG/M
3300031962\|Ga0307479_10531281	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300032180\|Ga0307471_101474337	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300032205\|Ga0307472_102458615	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300032895\|Ga0335074_10573971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.84%
Aquatic	Environmental → Aquatic	9.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.31%
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Sediment	Environmental → Aquatic → Sediment	3.05%
Peat	Environmental → Terrestrial → Peat	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.57%
Loam	Environmental → Terrestrial → Soil → Loam	11.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011082	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103664921	3300001593	Forest Soil	IVEKRTKIGTVHACLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKF*
JGIcombinedJ26739_1009665871	3300002245	Forest Soil	TKIGTVHACIKEGCDWEKLVPETPPQAPSEEVPVPVTAKS*
JGI25384J37096_102620072	3300002561	Grasslands Soil	FIVEKRSKIGTVHACLKEGCDWEKLVPEAQPQVQPEEAPVPVAVKS*
JGI25617J43924_100078983	3300002914	Grasslands Soil	FIVEKKTKIGAVRACLKEGCDWEQLVPEAQPQTQLEEAPVPVAAKS*
JGI25617J43924_102275952	3300002914	Grasslands Soil	KIGNVRACLKDGCDWEQLVPEAPPQVQPEEAAVPVAVKS*
JGI26342J46808_10046533	3300003220	Bog Forest Soil	TKIGVVHSCLKEGCDWEKLAPEPQTAQPQVQSEEPTPVGAKP*
JGI26336J50218_10074572	3300003372	Bog Forest Soil	IVEKKTKIGVVHSCLKEGCDWEKLAPEPQTAQPQVQSEEPTPVGAKP*
Ga0062384_1000711861	3300004082	Bog Forest Soil	EKKSKIGTVHTCLKEGCDWEKLAPEPAPPPQFQPEEATPVGAKP*
Ga0062387_1000675583	3300004091	Bog Forest Soil	EKKTKIGLVHTCLKEGCDWEKLAPEPVAPSQVQPEEATPVGAKP*
Ga0062389_1025946571	3300004092	Bog Forest Soil	KKSKIGTVYTCLKEGCDWEKLAPEPVVAAPSPQEEPVPAGAKP*
Ga0066395_100590703	3300004633	Tropical Forest Soil	VEKNSKIGKVHACLKEGCDWEKLVPEAPPPQQEEAPVPVAAKS*
Ga0066690_109138372	3300005177	Soil	KNSKIGKVHACLKEGCDWEKLVPEVSSATQPEEAPVPVAAKS*
Ga0066685_100309625	3300005180	Soil	IVEKRTKIGTVHSCIKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS*
Ga0066678_101208833	3300005181	Soil	FIVEKRAKIGTVHSCLKEGCDWEKLVPEAPPQAQPEEAPVPVAAKS*
Ga0070733_100901983	3300005541	Surface Soil	HTCIKEGCDWEQLAPEPQPVAAPAPVEEPTPVGAKP*
Ga0066692_102512362	3300005555	Soil	FIVEKRSKIGTVHACLKEGCDWEKLVPEAQPQAQPEEAPVPVAVKS*
Ga0066704_102616231	3300005557	Soil	APFIVEKRTKTGTVRSCIKDGCDWEIPVSETPPQTQPEEVPVPVAAKP*
Ga0066698_104550122	3300005558	Soil	FIVEKRSKIGTVHACLKEGCDWEKLVPEAPPAAQPEEAPVPVAAKS*
Ga0066693_100869322	3300005566	Soil	NSKIGKVHACLKEGCDWEKLVPEVSPATQPEEAPVPVAAKS*
Ga0066705_100869671	3300005569	Soil	KRTKTGSVRACLKEGCDWETPILEAQPQVQTEEAPVPVAAKS*
Ga0070761_107881842	3300005591	Soil	FIVEKKSKIGTVHTCLKEGCDWEQLAPEPQPVAAPAPVEEPTPVGAKP*
Ga0070762_109196212	3300005602	Soil	TKIGLVHTCLKEGCDWEKLAPEPIAAPAQPQPEEATPVGAKP*
Ga0066903_1054309561	3300005764	Tropical Forest Soil	KNSKIGKVHACLKEGCDWEKLVPEAPPAAQPEEAPVPVAVKS*
Ga0066652_1003367073	3300006046	Soil	RSKIGTVHACLKEGCDWEKLVPEAPPAAQPEEAPVPVAAKS*
Ga0075028_1006986992	3300006050	Watersheds	PFIVEKKSKIGVVHSCVKEGCDWEKLAPEPASAPQQTQPAPTEEPTPVGAKP*
Ga0075028_1009177092	3300006050	Watersheds	RAKIGTVHACLKEGCDWEKLVPEAQTPSEEVPVPVTAKS*
Ga0075014_1007727451	3300006174	Watersheds	EKRTKTGNVRACLKENCDWEAAIPEAEPPAQPEEAAVPVAVKS*
Ga0070765_1005273883	3300006176	Soil	KIGTVHACLKEGCDWEQLAPEPAPPQVQPEEAAPVGAKP*
Ga0066665_105947932	3300006796	Soil	EKRTKTGSVRACLKEGCDWETPILEAQPQVQTEEAPVPVAAKS*
Ga0099794_101235081	3300007265	Vadose Zone Soil	FIVEKRTKIGTVHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS*
Ga0099830_112661221	3300009088	Vadose Zone Soil	IGAVRACLKEGCDWEQLVPEAPPQTQLEEAPVPVAAKS*
Ga0099828_117363032	3300009089	Vadose Zone Soil	KKSKIGTVHACLKEGCDWEKLVDEPAPHAQPEEVVAPVGAKP*
Ga0099827_111329151	3300009090	Vadose Zone Soil	FIVEKRTKTGIVRACLKEGCDWEILVPEAHPQAQPEEAPVPVAAKS*
Ga0134065_102360371	3300010326	Grasslands Soil	RSKIGTVHACLKEGCDWEKLVPEAQPQAQPEEAPVPVAVKS*
Ga0126350_106050741	3300010880	Boreal Forest Soil	GVVHTCLTEGCDWEKLAPEPAATPQVQPEEPTPVGAKP*
Ga0138526_11537791	3300011082	Peatlands Soil	IVEKKSKIGVVHTCLKEGCDWEKLAPEPAAAPQVQPEEPTPVGAKP*
Ga0137392_100207441	3300011269	Vadose Zone Soil	IVEKRTKIGTVHACLKDGCDWEKLVPEAQPQAQTEEAVAPVGAKS*
Ga0137391_113389651	3300011270	Vadose Zone Soil	EKRSKIGMVHACLKEGCDWEKLVPEIQPQAQPEETVAPVGAKS*
Ga0137388_108689702	3300012189	Vadose Zone Soil	TKTGTVRACINEGCVWEMLVPGAQPPAQPEEAPVPVAAKF*
Ga0137383_103426631	3300012199	Vadose Zone Soil	RTKIGAVHACLKEGCDWEQLVPEAQPQAQPEEAPVPVAAKS*
Ga0137382_100446945	3300012200	Vadose Zone Soil	TKIGAVRACLKEGCDWEQLVPEAQPQAQPEEAPVPVAAKS*
Ga0137363_101594571	3300012202	Vadose Zone Soil	PFIVEKRTKIGTVHACLKEGCDWEKLVPEAPPQTPSEEVPVPVAVKS*
Ga0137363_105515262	3300012202	Vadose Zone Soil	VRACLKEGCDWEQLVPEAPPQTQLEEAPVPVVAKS*
Ga0137399_100358274	3300012203	Vadose Zone Soil	IGTVHSCLKEGCDWEKLVPEAQPQAQPEESPVPVAAKS*
Ga0137362_104320282	3300012205	Vadose Zone Soil	VHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS*
Ga0137362_106551242	3300012205	Vadose Zone Soil	VRACLKEGCDWEKLVPEVPPQAQPEEAPVPVAAKS*
Ga0137379_111871252	3300012209	Vadose Zone Soil	IVEKRTKIGTVHSCLKEGCDWEKLVPEVQPQAQPEEAPVPVAAKS*
Ga0137378_104216421	3300012210	Vadose Zone Soil	PFIVEKRSKIGTVHSCLKEGCDWEKLVPEAQPQAQPEETVAPVGAKP*
Ga0137387_101428881	3300012349	Vadose Zone Soil	KCGAPFIVEKRSKIGTVHSCLKEGGDGEKLVPEAQPQAQPEETVAPVGAKP*
Ga0137387_104911151	3300012349	Vadose Zone Soil	SKIGTVHTCLKEGCDWEKLAPEVPQPTQPEEAPVPVAVKS*
Ga0137371_105466241	3300012356	Vadose Zone Soil	KKTKIGAVRACLKEGCDWEQLVPEAQPQTQLEEAPVPVAAKS*
Ga0137360_103487581	3300012361	Vadose Zone Soil	TKIGAVRACLKEGCDWEQLVPEAQPQTQLEEAPVPVVAKS*
Ga0137360_110154031	3300012361	Vadose Zone Soil	TVHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS*
Ga0137360_114980061	3300012361	Vadose Zone Soil	KIGTVHSCLKEGCDWEKLVPEAQPQTQPEEAPVPVAAKS*
Ga0137413_103772752	3300012924	Vadose Zone Soil	IVEKKSKIGLVRTCIKEGCDWEKLAPEAPVTQPEEATPVGAKP*
Ga0137419_106448661	3300012925	Vadose Zone Soil	TKIGTVHACLKEGCDWEQLVPEAQPQAQPEEAPVPVAAKP*
Ga0137419_119316901	3300012925	Vadose Zone Soil	HSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS*
Ga0137407_108669531	3300012930	Vadose Zone Soil	KSKIGLVRTCIKEGCDWEKLAPEAPVTQPEEATPVGAKP*
Ga0137407_117228552	3300012930	Vadose Zone Soil	VHACLKEGCDWEKLVLEAPPQAPSEEVPVPVAAKS*
Ga0164301_102145021	3300012960	Soil	KKSKIGLVRTCIKEGCDWEKLAPEAPVTQPEEATPVGAKP*
Ga0134087_102116562	3300012977	Grasslands Soil	GTVRACLKEGCDWELLVPEGPPQAQPEEAPVPVAAKS*
Ga0134081_100374792	3300014150	Grasslands Soil	IVEKRSKIGTVHACLKEGCDWEKLVPEAQPQVQPEEAPVPVAVKS*
Ga0134081_102834121	3300014150	Grasslands Soil	TLHSCIKEGCDWEQLAPEPVPAAPQAQPEEAATPVGAKP*
Ga0137405_10945541	3300015053	Vadose Zone Soil	EKRSKIGTVHSCLKEGSCLKEGCDWEKLVPEAQPQAQPEEAQVPVAAKS*
Ga0137405_10945571	3300015053	Vadose Zone Soil	EKRSKIGTVHSCLKEGCDWEKLVPEAQPQAQPEEAQVPVAAKS*
Ga0137420_12637191	3300015054	Vadose Zone Soil	RLPQRACLKEGCDWEMLVPEAQPQAQPEEAPVPVAAKS*
Ga0134073_100503832	3300015356	Grasslands Soil	VEKRSKIGTVHACLKEGCDWEKLVPEAPPAAQPEEAPVPVAAKS*
Ga0134073_101956412	3300015356	Grasslands Soil	HACLKEGCDWEKLVPEVSPATQPEEAPVPVAAKS*
Ga0134072_101876401	3300015357	Grasslands Soil	KTGSVRACLKEGCDWETPVLEAQPQVQAEEAPVPVAAKS*
Ga0182032_115418782	3300016357	Soil	FVVEKKSKIGMVRACIKDGCDWEKLAPEAPVVQQEEPTPVGAKS
Ga0134083_101599011	3300017659	Grasslands Soil	RIKTGSVRACLKEGCDWETPVLEAQPQVQTEEAPVPVAAKS
Ga0187818_100738691	3300017823	Freshwater Sediment	IGTVRACLKEGCDWEQLIPDAQPVAQPEEAAESVAAKS
Ga0187825_103488881	3300017930	Freshwater Sediment	KRTKTGNVRACLKEGCDWEQEILEAQPQALPEEAPVPVAVKS
Ga0187765_101528701	3300018060	Tropical Peatland	KIGTLHACIKEGCDWEKLADVPPAPASQPEEAAPVGAKP
Ga0193753_100504031	3300020034	Soil	TVWTCIKDGCDWEKLAPENLPPPSQPEELAPVGAKV
Ga0193717_11584441	3300020060	Soil	FIVEKKSKIGTVWTCIKDGCDWEKLAPENLPPPSQPEELAPVGAKV
Ga0210403_101579483	3300020580	Soil	TKIGTVHSCLKEGCDWEKLIPDAPPQTQPEEDPVPVAAKS
Ga0210403_109086692	3300020580	Soil	TKIGLVHTCLKEGCDWEKLAPEPAAVAPPQAQPEEATPVGAKL
Ga0210399_101834411	3300020581	Soil	FIVEKKSKIGTVHTCIKEGCDWEQLAPEAQPAVQPEEATPVGAKP
Ga0179596_107214462	3300021086	Vadose Zone Soil	GTVRSCLKEGCDWEMLVPETPPQTQPEEVPVPVAVKS
Ga0210404_105504722	3300021088	Soil	KKTKIGTVHTCLKEGCDWEKLAPEPQTQPQPQVQPEEAAPVGAKL
Ga0210388_102470473	3300021181	Soil	KIGTVHACLKEGCDWEQLVPEILPQTQPEEVPVPVASKF
Ga0210387_106930301	3300021405	Soil	AAPFIVEKKSKIGVVHTCIKEGCDWEQLAPEPQPAAVPAPVHVEEPTPVGAKP
Ga0210390_104004572	3300021474	Soil	FVVEKKTKIGTVHACLKEACDWEQLAPEPAVAPQAQPEEATPVGAKL
Ga0210398_105476441	3300021477	Soil	CLKEGCDWEKLAPEPQTQPQPQVQPEEAAPVGAKL
Ga0210410_112350131	3300021479	Soil	TVRACLKEGCDWEQLAPEPAPQVQPEEAAPVGAKP
Ga0210409_103822982	3300021559	Soil	KTGNVRACLKEGCDWEQEILEPQAQAQPQPQVQPEEAPVPVAVKS
Ga0210409_105734072	3300021559	Soil	EKRTKIGTVHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS
Ga0210409_107397921	3300021559	Soil	EKRTKIGTVHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKF
Ga0210409_108596641	3300021559	Soil	VEKKSKIGTVHTCIKEGCDWEQLAPETQPAPQPEEATPVGAKP
Ga0210409_112229791	3300021559	Soil	IGTVHACIKENCDWEKLIPEALPQTQPEEVPVPVAAKS
Ga0126371_129346962	3300021560	Tropical Forest Soil	VHACLKEGCDWEKLVPEAPPAAQPEEAPVPVAVKS
Ga0247695_10358601	3300024179	Soil	KKSKIGLVRTCIKEGCDWEKLAPEAPVTQPEEATPVGAKP
Ga0207692_109903342	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FIVEKKSKIGVVHTCLKEGCDWEQLAPEPQAPSVPAPVEEPTPVGAKP
Ga0207699_113617991	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	KSKIGLVRTCIKEGCDWEKLAPEAPVTQPEEATPVGAKP
Ga0209863_100924202	3300026281	Prmafrost Soil	FIVEKKSKIGVVHTCVKDGCDWEKLAPEPQTQTQVPVPVQPEEPTPVGAKP
Ga0209688_10255572	3300026305	Soil	IVEKNSKIGKVHACLKEGCDWEKLVPEVSPATQPEEAPVPVAAKS
Ga0209761_13429261	3300026313	Grasslands Soil	FIVEKRSKIGTVHACLKEGCDWEKLVPEAQPQVQPEEAPVPVAVKS
Ga0209470_13493412	3300026324	Soil	IGTVHSCLKEGCDWEKLVPDAQPQAQPEEAPIPVAAKS
Ga0209804_13082951	3300026335	Soil	KNSKIGKVHACLKEGCDWEKLVPEVSSATQPEEAPVPVAAKS
Ga0209160_13425042	3300026532	Soil	KIGTVHACLKEGCDWEKLVPEAQPQAQPEEAPVPVAVKS
Ga0209056_103795262	3300026538	Soil	IVEKRTKTGSVRACLKEGCDWETPILEAQPQVQTEEAPVPVAVKS
Ga0179587_103903022	3300026557	Vadose Zone Soil	EKRTKIGTVHSCLKEGRDWEKLVPEAQPQAQPEEAPVPVAAKS
Ga0207948_10247782	3300027174	Forest Soil	FIVEKRTKIGTVHACLKEGCDWEQLVPEILPQTQPEEVPVPVASKS
Ga0209222_11227581	3300027559	Forest Soil	CPKCGALFIVEKKSKIGIVHTCLKEGCDWEQLAPEPQPATVPVPVEEPTPVGAKP
Ga0209588_10089351	3300027671	Vadose Zone Soil	IVEKRTKIGTVHACLKEGCDWEKLVPEAQPQAQPEEAVAPVGAKP
Ga0209038_100288083	3300027737	Bog Forest Soil	SKIGTVYTCLKEGCDWEKLAPEPAVAPAPQQEEPVPVGAKS
Ga0209689_12023011	3300027748	Soil	VEKRTKTGSVRACLKEGCDWETPVLEAQPQVQTEEAPVPVAAKS
Ga0209274_106059431	3300027853	Soil	FIVEKKSKIGTVHTCLKEGCDWEQLAPEPQPVAAPAPVEEPTPVGAKP
Ga0209701_104590822	3300027862	Vadose Zone Soil	KSKIGNVRACLKDGCDWEQLVPEAPPQVQPEEAAVPVAVKS
Ga0209067_100329041	3300027898	Watersheds	LHACLKEGCDWEIEPPKPQPQALPEEAPVPVALKS
Ga0209006_103905342	3300027908	Forest Soil	IVEKKSKIGTVYTCLKEGCDWEKLAPEPTPAASPSAAPQEEPVPAGAKL
Ga0209526_104947152	3300028047	Forest Soil	KIGTVRACLKDGCDWEVLASEGQPPLLAEEAAVPVAAKF
Ga0209526_107478721	3300028047	Forest Soil	KIGIVHTCIKEGCDWEQLAPEAQPAAQPEEATPVGAKP
Ga0222749_107808751	3300029636	Soil	SKIGTVHTCIKDGCDWEQLAPEAQAPTAAQPEEATPVGAKP
Ga0311355_101831121	3300030580	Palsa	FIVEKKSKIGTVHSCVKEGCDWEKLAPEPQTPVPVSVPAEEPTPVGAKP
Ga0302313_103882121	3300030693	Palsa	FIVEKKSKIGTVHTCLTEGCDWEKLAPEPAAPPAAPQEEPVPAGVKS
Ga0073994_121348971	3300030991	Soil	APFIVEKRTKIGTVHSCLKEGCDWEKLVPEAQPLAQPEETVAPVGAKP
Ga0318538_103973942	3300031546	Soil	SKIGTVHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKS
Ga0307474_105564032	3300031718	Hardwood Forest Soil	VEKKTKIGTVRACLKEGCDWEQLAPEPAPQVQPEEAAPVGAKP
Ga0307477_104759192	3300031753	Hardwood Forest Soil	RTKTGNVRACLKEGCDWEAVLPEAQPQAQAEEAPVPVAAKS
Ga0307475_110154382	3300031754	Hardwood Forest Soil	IGTVHSCLKEGCDWEKLVPEAQPQAQPEEAPVPVAAKS
Ga0318537_100219633	3300031763	Soil	IGTVHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKS
Ga0318509_103952152	3300031768	Soil	VHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKVLSPLV
Ga0318508_10226401	3300031780	Soil	EKRSKIGTVHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKS
Ga0318557_100590951	3300031795	Soil	VHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKS
Ga0310910_100586321	3300031946	Soil	TVHACLKEGCDWEKLVPEAAPSAQPEEAQVPVAAKS
Ga0307479_105312811	3300031962	Hardwood Forest Soil	VHSCLKEGCDWEKLVPEAQPQAQPEEAQVPVAAKS
Ga0307471_1014743371	3300032180	Hardwood Forest Soil	IGTVHACLKEGCDWEKLVPETPPQAPSEEVPVPVAAKS
Ga0307472_1024586151	3300032205	Hardwood Forest Soil	TGNVRACLKEGCDWEQEILEAQPQAQPEEAPVPVAVKS
Ga0335074_105739711	3300032895	Soil	VHACLREGCDWEKLAPEPESQPQVQPEEATPVGAKP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062063

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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