Metagenome / Metatranscriptome Family F062056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	73 residues
Representative Sequence	GAVLTGVGLVVLMLVSRYVMQFWVDLYARDYGGFGVVLAIYFWLAFSSALIVWAASLSPALAARREFRRDA
Number of Associated Samples	117
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.08 %
% of genes near scaffold ends (potentially truncated)	93.13 %
% of genes from short scaffolds (< 2000 bps)	93.89 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.366 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.977 % of family members)
Environment Ontology (ENVO)	Unclassified (23.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.382 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03631	Virul_fac_BrkB	9.16
PF01709	Transcrip_reg	5.34
PF10099	RskA	3.82
PF06831	H2TH	3.82
PF08241	Methyltransf_11	2.29
PF09851	SHOCT	2.29
PF07690	MFS_1	2.29
PF04237	YjbR	1.53
PF01548	DEDD_Tnp_IS110	1.53
PF08240	ADH_N	1.53
PF06827	zf-FPG_IleRS	1.53
PF01590	GAF	0.76
PF04525	LOR	0.76
PF02288	Dehydratase_MU	0.76
PF13673	Acetyltransf_10	0.76
PF01022	HTH_5	0.76
PF13520	AA_permease_2	0.76
PF13649	Methyltransf_25	0.76
PF07883	Cupin_2	0.76
PF00931	NB-ARC	0.76
PF03006	HlyIII	0.76
PF13669	Glyoxalase_4	0.76
PF08327	AHSA1	0.76
PF06724	DUF1206	0.76
PF00271	Helicase_C	0.76
PF00557	Peptidase_M24	0.76
PF13180	PDZ_2	0.76
PF00892	EamA	0.76
PF07681	DoxX	0.76
PF00282	Pyridoxal_deC	0.76
PF07228	SpoIIE	0.76
PF13792	Obsolete Pfam Family	0.76
PF06202	GDE_C	0.76
PF06736	TMEM175	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	9.16
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	5.34
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	3.82
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	1.53
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.53
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.76
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.76
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.76
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.76
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.76
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.76
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.37 %
Unclassified	root	N/A	7.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.37 %
Unclassified	root	N/A	7.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.37 %
Unclassified	root	N/A	7.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.27 %
Unclassified	root	N/A	7.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.98 %
Unclassified	root	N/A	7.63 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.72 %
Unclassified	root	N/A	7.63 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.53 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.53 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.98 %
Unclassified	root	N/A	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.53 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.53 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.98 %
Unclassified	root	N/A	7.63 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.53 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.76 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.98 %
Unclassified	root	N/A	7.63 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1.53 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.76 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.98 %
Unclassified	root	N/A	7.63 %
Streptomyces flavidovirens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces flavidovirens	1.53 %
Paenibacillus mucilaginosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus mucilaginosus	1.53 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.76 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02FI3C5	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
2189573005\|GZGK9D401EHGQQ	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300000956\|JGI10216J12902_102645528	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300001431\|F14TB_101878422	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300002568\|C688J35102_120325804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	992	Open in IMG/M
3300004092\|Ga0062389_104269429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces flavidovirens	537	Open in IMG/M
3300004114\|Ga0062593_102798007	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300004156\|Ga0062589_101241918	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300004635\|Ga0062388_102574211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces flavidovirens	534	Open in IMG/M
3300005186\|Ga0066676_10655698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300005186\|Ga0066676_10781621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300005332\|Ga0066388_100270465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2341	Open in IMG/M
3300005332\|Ga0066388_102010726	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005332\|Ga0066388_106485672	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005435\|Ga0070714_101114748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300005436\|Ga0070713_100734124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300005437\|Ga0070710_10191162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1287	Open in IMG/M
3300005445\|Ga0070708_101443104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300005454\|Ga0066687_10910661	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005540\|Ga0066697_10290654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	962	Open in IMG/M
3300005549\|Ga0070704_100398352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1174	Open in IMG/M
3300005564\|Ga0070664_101834648	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005569\|Ga0066705_10105498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1681	Open in IMG/M
3300005569\|Ga0066705_10656128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300005576\|Ga0066708_10979205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300005587\|Ga0066654_10384048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300005614\|Ga0068856_100311047	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300005614\|Ga0068856_102177407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300005713\|Ga0066905_100037686	All Organisms → cellular organisms → Bacteria	2829	Open in IMG/M
3300005764\|Ga0066903_104140459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300005764\|Ga0066903_107295209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300006046\|Ga0066652_101313918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	681	Open in IMG/M
3300006046\|Ga0066652_102053504	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006049\|Ga0075417_10613269	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006175\|Ga0070712_100038652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3262	Open in IMG/M
3300006178\|Ga0075367_10589566	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006800\|Ga0066660_10810065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300006893\|Ga0073928_11185067	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006904\|Ga0075424_100600968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300007076\|Ga0075435_101994890	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009143\|Ga0099792_10996118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300009148\|Ga0105243_11565171	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009162\|Ga0075423_10195703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2120	Open in IMG/M
3300009174\|Ga0105241_11363841	Not Available	678	Open in IMG/M
3300009551\|Ga0105238_10652647	Not Available	1062	Open in IMG/M
3300009551\|Ga0105238_11299501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300009553\|Ga0105249_11499402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300010043\|Ga0126380_12274096	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010322\|Ga0134084_10050750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1221	Open in IMG/M
3300010337\|Ga0134062_10418612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300010360\|Ga0126372_12730180	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300010362\|Ga0126377_11701999	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010364\|Ga0134066_10310182	Not Available	570	Open in IMG/M
3300010364\|Ga0134066_10442454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300010366\|Ga0126379_10260403	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300010366\|Ga0126379_12104736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300010396\|Ga0134126_12717089	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010396\|Ga0134126_12805899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300010398\|Ga0126383_12832473	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010399\|Ga0134127_10441364	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300010400\|Ga0134122_10131521	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300010401\|Ga0134121_10122596	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300012208\|Ga0137376_11571060	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012489\|Ga0157349_1021003	Not Available	616	Open in IMG/M
3300012892\|Ga0157294_10276387	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300012958\|Ga0164299_10647098	Not Available	730	Open in IMG/M
3300012960\|Ga0164301_10653163	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012971\|Ga0126369_13624026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012986\|Ga0164304_11662570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300013104\|Ga0157370_11512281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300013297\|Ga0157378_10869413	Not Available	931	Open in IMG/M
3300013308\|Ga0157375_12138438	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300014154\|Ga0134075_10490980	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300015358\|Ga0134089_10359016	All Organisms → cellular organisms → Bacteria → Terrabacteria group	615	Open in IMG/M
3300015372\|Ga0132256_102016125	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300016294\|Ga0182041_12174633	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300016371\|Ga0182034_11540109	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300016422\|Ga0182039_11712464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus mucilaginosus	575	Open in IMG/M
3300017944\|Ga0187786_10205436	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300017961\|Ga0187778_10410873	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300017966\|Ga0187776_10881696	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018482\|Ga0066669_10893223	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300018482\|Ga0066669_12395026	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300020081\|Ga0206354_10110839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300021560\|Ga0126371_11905620	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300024055\|Ga0247794_10115613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300024254\|Ga0247661_1069516	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300024323\|Ga0247666_1068620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300025899\|Ga0207642_11052305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300025901\|Ga0207688_10575327	Not Available	709	Open in IMG/M
3300025918\|Ga0207662_10327361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300025921\|Ga0207652_11084399	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300025929\|Ga0207664_11915044	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300025932\|Ga0207690_10625800	Not Available	880	Open in IMG/M
3300025935\|Ga0207709_10309044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300025939\|Ga0207665_10069877	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300025961\|Ga0207712_10883099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300026023\|Ga0207677_10780140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300026078\|Ga0207702_12488254	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026088\|Ga0207641_11012279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300026295\|Ga0209234_1188835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	712	Open in IMG/M
3300026308\|Ga0209265_1070126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300027817\|Ga0209112_10219538	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300027874\|Ga0209465_10416801	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027903\|Ga0209488_11059487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300028293\|Ga0247662_1090374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300031184\|Ga0307499_10170889	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031562\|Ga0310886_11073133	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031564\|Ga0318573_10169064	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031723\|Ga0318493_10630756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus mucilaginosus	598	Open in IMG/M
3300031747\|Ga0318502_10124734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300031764\|Ga0318535_10316946	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031765\|Ga0318554_10661047	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031765\|Ga0318554_10670658	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031771\|Ga0318546_10533116	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300031819\|Ga0318568_10811831	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031835\|Ga0318517_10166600	Not Available	988	Open in IMG/M
3300032055\|Ga0318575_10152949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	1147	Open in IMG/M
3300032064\|Ga0318510_10245815	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300032089\|Ga0318525_10354099	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300032089\|Ga0318525_10654072	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300032174\|Ga0307470_11700469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300032180\|Ga0307471_104343956	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300032211\|Ga0310896_10260254	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300032828\|Ga0335080_12058103	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300032892\|Ga0335081_11908033	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032893\|Ga0335069_10371231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300032954\|Ga0335083_10644487	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300033805\|Ga0314864_0079667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300034819\|Ga0373958_0185236	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.15%
Host-Associated	Host-Associated	19.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.86%
Plants	Host-Associated → Plants	19.85%
Aquatic	Environmental → Aquatic	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.34%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.49%
Loam	Environmental → Terrestrial → Soil → Loam	15.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.29%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_07710480	2170459009	Grass Soil	RRDLLPGAVVTALGLVVLMLASSYVMQYWVDLYARDYGGFGVVLAIYFWLALSSALIVGTASLSPALAERRNLPPRV
FG3_09252970	2189573005	Grass Soil	GAVLTAVGLVVLTFVSGLVMEPWVNLYARDYGGLGVVLAIYFWIAFYSFVIVGAASLAPALAQRRHSAPSG
JGI10216J12902_1026455281	3300000956	Soil	VALMVVSRFVMPFWVDLYARDYGGLGVVLALYFWIAFSSAIIVLAASLSPALADRRERRRSL*
F14TB_1018784221	3300001431	Soil	LPGAVLAAFGLVALMLISSYMMEFWVNLYARDYGGXXXXXXIYFWILFSSGIIVWAASLSPALAERRKLRRRS*
C688J35102_1203258041	3300002568	Soil	LVVLMFISNFVMEYWVNLYARDYGGLGVVLAIYFWIAFSSAVIVAAASLSPALAERRMLRAS*
Ga0062389_1042694291	3300004092	Bog Forest Soil	KLVTRRDLLPAAALTAFALVLLMLVSRYVMQYWVDLYAEDYGGLGVVLAIYFWIAISSGIIVWAASLSPALAVRRDLRHR*
Ga0062593_1027980071	3300004114	Soil	PAAALTALGLVLLMFLSRYVMGFWVDLYARDYGGLGVVLAIYFWIALSSGVIVLAASLSPALAQRRDLRHAR*
Ga0062589_1012419182	3300004156	Soil	TRRDLLPGAVLTALGIVLLMLASSYVMQFWVDFYARDYGGLGVVLAIYFWIAFSSAIIVWAASLSPALADRRNLRRLLSES*
Ga0062388_1025742111	3300004635	Bog Forest Soil	LVTRRDLLPAAALTAFALVLLMLVSRYVMQYWVDLYAEDYGGLGVVLAIYFWIAISSGIIVWAASLSPALAVRRDLRHR*
Ga0066676_106556981	3300005186	Soil	IAPRDLLPGAALTAFGLVALMVVSRYGMQFWVNLYAKDYGGLGVVLAIYFWLAVCSGIIVWAASLSPALAERREVRRSASVDSGA*
Ga0066676_107816212	3300005186	Soil	GLVALMLISSFVMELWVNLYARDYGGFGVVLAIYFWLLFSSGIIVWAASLSPALAERRDLRRRP*
Ga0066388_1002704651	3300005332	Tropical Forest Soil	ALGLVVLMIVSSFVMEYWVDFYAKDYGGLGVVMAIFFWIGFSSTVIVAAAALSPALSQRRELRAS*
Ga0066388_1020107261	3300005332	Tropical Forest Soil	MLVSRYVMQFWVDLYARDYGGLGVIMAVYFWLALSSAAIVWAASVAPALAERREFRRILAPGAGARDES*
Ga0066388_1064856721	3300005332	Tropical Forest Soil	ALGLVVLMFVSNYVMQFWIDLYARDYGGLGVVLAIYFWIAFSSAVIVWAASMSPALAARRSLRQTG*
Ga0070714_1011147482	3300005435	Agricultural Soil	LPGAALTALALVALMIVSSNVMNLWVNLYARDYGGFGVVMAVFFWLGLSSTATVGAAILNPVLAERRRARYVVATTR*
Ga0070713_1007341242	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLTAVGLVLLMLVSRYVMQFWVNLYARDYGGFGVVLALYFWIAVSSALIVWAASLAPALAERRELRALVSG*
Ga0070710_101911621	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LTAVGLVVLMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRT*
Ga0070708_1014431043	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RVLLPGAVLTAVGLVVLMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRI*
Ga0066687_109106612	3300005454	Soil	LVALMLISSFVMELWVNLYARDYGGFGVVLAIYFWLLFSSGIIVWAASLSPALAERRDLRRRP*
Ga0066697_102906541	3300005540	Soil	AALTAVGLVALMLISSVVMEFWVDFYAKDYGGLGVVMAIFFWIGLSSTVIVAAASLSPALAHRRDLRR*
Ga0070704_1003983523	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DLVPGAVLTALGLIAFMVVSRFVMQFWVDLYARDYGGLGVVLAIYFWIAFSSAVIVWAASLSPPLSERRTLKHADTSRR*
Ga0070664_1018346481	3300005564	Corn Rhizosphere	VLAGVGLVVLMLVSSYVMEFWVNWYARDYGGFGVVLAIYFWILLSSGLIIWAAALSPALAQRRAARRAQ*
Ga0066705_101054984	3300005569	Soil	PGAVLTAFGLVALMLISSFVMELWVNLYARDYGGFGVVLAIYFWLLFSSGIIVWAASLSPALAERRDLRRRP*
Ga0066705_106561281	3300005569	Soil	LPGAALTSVGLVALMVVSRYVMQFWVNLYAKDYGGLGVVLAIYFWIALCAGIIVWAASLSPALAERRDARSSASVGG*
Ga0066708_109792051	3300005576	Soil	ALTAVGLGVLSGISQLIGQFWVDLYARDYGGLGVIMAIFFWIAISSAVIVVAASLSPALAERRKLRREPASPVASVTRARAGD*
Ga0066654_103840481	3300005587	Soil	FGLVALMLISSFVMELWVNLYARDYGGFGVVLAIYFWLLFSSGIIVWAASLSPALAERRDLRRRP*
Ga0068856_1003110471	3300005614	Corn Rhizosphere	HKLVSRRDLLPAAVLTALGLVVLMIVSRYVMGFWINFYARDYGGLGVVLAIYFWIALSSGVIVLAASLSPALAQRRDLRSEESLRSSA*
Ga0068856_1021774071	3300005614	Corn Rhizosphere	TALALVALMTVSNFFMQYWVDLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPALAARRSFRAERASSVST*
Ga0066905_1000376861	3300005713	Tropical Forest Soil	LIAPRDLLPGAVLTAVGLVLVMFISSFVMEFWINFYARDYGGLGVVLAIYFWIAFSSAVIIWAASLSPSLAERREFRQQP*
Ga0066903_1041404591	3300005764	Tropical Forest Soil	LALVVLMVVSRFVMQYWVDLYARDYGGLGVVLAIYFWILLSAAVIVGAASLSPALAERRIARALPE*
Ga0066903_1072952091	3300005764	Tropical Forest Soil	LTHKLITRRALLPSAIVTALGLVVLMFVSNYVMQFWIDFYARDYGGLGVVLAIYFWIAFSSAVIVWAASMSPALAARRSLRQTG*
Ga0066652_1013139182	3300006046	Soil	TAVGLVVLMIVSSYVMEPWVDLYARDYGGFGVVLAIYFWLLFSSGVIVWAAAVAPALAQRRASTGRTARR*
Ga0066652_1020535041	3300006046	Soil	TAVGLVVLMIVSSYVMEPWVDLYARDYGGFGVVLALYFWIAFSSAVIVWAAALAPALAQRRAASITLP*
Ga0075417_106132691	3300006049	Populus Rhizosphere	PGAVLTAFGLVALMLISSYVMEFWVNLYARDYGGFGVVLAIYFWVLFSSGIIVWAASLSPALAERRKLRRRS*
Ga0070712_1000386522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HKLISRRDLLPAAALTGLGLVLLMIISRYVMQYWVDLYARDYGGFGVVLAIYFWLAFSSAVIVWAASLSPALAERRNIRRRSTTSTVHR*
Ga0075367_105895661	3300006178	Populus Endosphere	VLLMVVSRYVMQFWIDLYARDYGGLGVVLAIYFWIALSSAIIVGAASLSPALADRRNLRTRNQDT*
Ga0066660_108100652	3300006800	Soil	VVLMVVSRYVMQFWVDLYAKDYGGLGVVLAIYFWIALCAGIIVWAASLSPALAERREARSSASIGA*
Ga0073928_111850672	3300006893	Iron-Sulfur Acid Spring	LTALGLVALMVVSRYVMQFWIDLYARDYGGLGVVLALYFWIAIGSAIVVWAASLSPALAVRREVRSRSVGMTRGD*
Ga0075424_1006009683	3300006904	Populus Rhizosphere	LISARDLLPAAALTAIGIVALMILSRFLMERWVDFYARDYGGFGVVMAIFFWIVFISAVIVWAASLSPALAQRRNLRAGGQ*
Ga0075435_1019948902	3300007076	Populus Rhizosphere	GAVLTAVGLVVLMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRT*
Ga0099792_109961181	3300009143	Vadose Zone Soil	RDLVPGAALTALGLVALMVVSRFVMQFWVDLYARDYGGLGVVLAIYFWIAICSGIIVWAASLSPALAERRDVRSSASVGG*
Ga0105243_115651712	3300009148	Miscanthus Rhizosphere	GATLSAVGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG*
Ga0075423_101957031	3300009162	Populus Rhizosphere	VLTTVGLVARMLLASYVMEFSVSLYARDYGGFGVVLATYLDPAQLGWAASLSPALAERRLLRRGRSTS*
Ga0105241_113638411	3300009174	Corn Rhizosphere	PGAVLAGVGLVVLMLLSSYVMQFWVNWYARDYGGFGVVLAIYFWILLSSGLIIWAASISPALAQRRAARRER*
Ga0105238_106526472	3300009551	Corn Rhizosphere	PYLLPCAVLAGVGLVVLMLLSSYVMQFWVNWYARDYGGFGVVLAIYFWILLSSGLIIWAASISPALAQRRAARRER*
Ga0105238_112995012	3300009551	Corn Rhizosphere	AFGLVALMVISSFVMELWVNLYARDYGGFGVVLAIYFWILFSSGIIVWAASLSPALAERRDLRQRP*
Ga0105249_114994022	3300009553	Switchgrass Rhizosphere	AAVTAVALVALMLISSFVMELWVNLYARDYGGFGVVMAIFFWIALSSAIVVWASAVSPPLAARRAARS*
Ga0126380_122740961	3300010043	Tropical Forest Soil	GAVLTGVGLVVLMLVSRYVMQFWVDLYARDYGGFGVVLAIYFWLAFSSALIVWAASLSPALAARREFRRDA*
Ga0134084_100507501	3300010322	Grasslands Soil	IKRRDLLPGAVLTALGLVVLMLVSRYVMQFWVDLYARDYGGLGVVLALYFWIAFSSALIVGTASLSPALAERRNLLQADLTGDSGR*
Ga0134062_104186122	3300010337	Grasslands Soil	LMIISSFAMQFWVDLYARDYGGFGVVLAIYFWIAFSSAVIVGAASLSPALAARRSLRAERASSAST*
Ga0126372_127301802	3300010360	Tropical Forest Soil	LFPGAVLTAAGLVIVMIASSFVMELWINLYARDYGGFGVVLAIYFWLAFSSAVIVWAASLSPALAERRQLRGSSPSGDAAGVSHGG*
Ga0126377_117019991	3300010362	Tropical Forest Soil	MLVSRYVMQFWVDLYARDYGGLGVIMAVYFWLALSSAAIVWAASVAPALAERREFRRLLAPGAGARDRS*
Ga0134066_103101822	3300010364	Grasslands Soil	LVVLIWISRFVMEFWINFYARDYGGFGVVMAIFFWIAFSSFVIVAAASLAPALAERRDLHEP*
Ga0134066_104424541	3300010364	Grasslands Soil	LTALALVVLIVVSNFVMQYWIDLYANDYGGLGVVLAIYFWIAFSSAVIVGAASLSPALAVRRSVRAQERASSAST*
Ga0126379_102604033	3300010366	Tropical Forest Soil	LPGAVLSALVLVVLMVVSSYVMEFWVDLYARDYGGFGIVLAIYFWLAIGSATIVWAASISPALAERRDLRRKPVEDAGDSVAS*
Ga0126379_121047361	3300010366	Tropical Forest Soil	LTSLSLVVLMVVSRFVMQYWVDLYARDYGGLGVVLALYFWIAFSSAVIVGAASLSPALAERRSVRASGADATAAGP*
Ga0134126_127170892	3300010396	Terrestrial Soil	VVLMMISRYVMQFWVDLYARDYGGLGVVLAIYFWIALSSGIIVWAASLSPALAVRRDLRRAR*
Ga0134126_128058992	3300010396	Terrestrial Soil	VVPGAAVTAVGLVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG*
Ga0126383_128324732	3300010398	Tropical Forest Soil	SAVLTALGLVVLMFLSSAVMQYWIDFYAKDYGGFGVVLAIYFWIAFSSAVIVWAASMSPALAARRSLRQTG*
Ga0134127_104413643	3300010399	Terrestrial Soil	GAVLAGVGLVVLMLLSSYVMQFWVNWYARDYGGFGVVLAIYFWILLSSGLIIWAASISPALAQRRAARREP*
Ga0134122_101315211	3300010400	Terrestrial Soil	KLVSRRVLLPGAVLTAVGLVVLMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRI*
Ga0134121_101225961	3300010401	Terrestrial Soil	QIAPRDLVPGAVLTALGLIAFMVVSRFVMQFWVDLYARDYGGLGVVLAIYFWIAFSSAVIVWAASLSPPLSERRTLKHADTSRR*
Ga0137376_115710601	3300012208	Vadose Zone Soil	LITALGLVLLMVVSSFVMEFWVDFYARDYGGFGVVMAISFWIGFSSAVIVGAASLAPVLVERRSLRSAPAR*
Ga0157349_10210032	3300012489	Unplanted Soil	VLVMLVSSFVMKFWVNLYARDYGGFGVVLAIYFWIVFSSAVIVAAASLSPALAERRELRHSS*
Ga0157294_102763871	3300012892	Soil	TWAPWLLTHKLVSRRDLLSGAVLTAVGLVVLMLISSRVMDFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRT*
Ga0164299_106470981	3300012958	Soil	TALGLVVLMVVSSHVMQFWVDFYARDYGGFGVILAIYFWILLCSGVIVWAASLSPSLAARRDLRRGRS*
Ga0164301_106531632	3300012960	Soil	ALTAVGLVLLILVSSWVMELWVDLYARDYGGFGVVMAIFFWILFSSAIIVGAASLSPALAERRRLRGQRRPAR*
Ga0126369_136240261	3300012971	Tropical Forest Soil	KQLALRDFLPAAGITALALVVLMVVSRFVMQYWVDLYARDYGGLGVVLAIYFWILFSAAVIVGAASLSPALAERRSARALPE*
Ga0164304_116625701	3300012986	Soil	TLSAIGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG*
Ga0157370_115122811	3300013104	Corn Rhizosphere	LLPGAGLIAVGLVALMAVSRFFMQFWVDLYARDYGGLGVVLAIYFWIAICSGIIVWAASLSPALAERREARRDATADTLPQSPHGG*
Ga0157378_108694132	3300013297	Miscanthus Rhizosphere	LAGVGLVVLMLLSSYVMQFWVNWYARDYGGFGVVLAIYFWILLSSGLIIWAASISPALAQRRAARRER*
Ga0157375_121384381	3300013308	Miscanthus Rhizosphere	TAIGLVVLMVISSFVMPLWVDLYARDYGGLGVVLAMYFWLAFSSATIVMAASISPALAARRAARSA*
Ga0134075_104909802	3300014154	Grasslands Soil	LISSVVMEFWVDFYAKDYGGLGVVMAIFFWIAFSSAVIVVAAALGPALAERRAVRRGATGTLL*
Ga0134089_103590161	3300015358	Grasslands Soil	AVGVVLLMWVSRYLMEFWVNLYVRDYGGFGVVMAIFFWIAFSSAVIVVAAVLGPALAERRAVRRGATVTLL*
Ga0132256_1020161252	3300015372	Arabidopsis Rhizosphere	ALGLVVLMIVSSHVMQFWVDLYARDYGGFGVILAIYFWILFSSGVIVWAASLSPSLAARRDLRRGRC*
Ga0182041_121746331	3300016294	Soil	LLPGSALTALALVVLMIVSSFVLEYWINWYAGDYGGFGVVMAIFFWIGFASTIVVIAASISPALAQRRGLLLAGRPEPTRRASSER
Ga0182034_115401091	3300016371	Soil	MIVSRYVMQFWVDLYARDYGGFGVLMAIYFWLALISAVIVAAGSLSPALADRRRLRAQPNPVGPESSG
Ga0182039_117124642	3300016422	Soil	GAGLTALGLVVLMIASSYVMQLWLDLYARDYGGFGVVMAIYFWLAFSSAVIVWAAAISPALAQRRELRR
Ga0187786_102054361	3300017944	Tropical Peatland	LIPRRDLLPAAVLTALGLVLLMIISRYVMQYWVDLYAGDYGGLGVVLAIYFWIAFSSAIIVWAASLSPALAERRNLRGNGSGK
Ga0187778_104108733	3300017961	Tropical Peatland	LITRRDLLPGAVVTAVGLVLLMLVSRFVMRFWVDLYARDYGGFGVVMAIFFWIAFSSAVIVWAVSISPPLAARRAAASTDR
Ga0187776_108816962	3300017966	Tropical Peatland	VGLVVLMLVSGFVGQFWVDLYARDYGGLGVVMAVYFWIALSSAIIVGAASLSPALAERRNLRTR
Ga0066669_108932232	3300018482	Grasslands Soil	KLIPRRDLLPGAGLTALGLVVLMLVSRYVMQFWVDLYARDYGGLGVVLAIYFWIAFSSALIVGTASLSPALADRRHLPRRL
Ga0066669_123950261	3300018482	Grasslands Soil	PAAILTAVGLVVLMLVSSYVMQFWVDLYAKDYGGLGVILAIYFWLALCSAVIVWAASLSPALAVRRDLRRQ
Ga0206354_101108391	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	GAGLTALALVALMTVSNFFMQYWVDLYARDYGGFGVVLAIYFWIAFSSAVIVGAASFSPALAARRSLRAERASSVSA
Ga0126371_119056202	3300021560	Tropical Forest Soil	MVVSRFFMQFWVDLYARDYGGLGVVLALYFWILIGSAVIVWAASLSPALAERREVRRDGAPPVTSS
Ga0247794_101156131	3300024055	Soil	GAVVTAVGLVALMVVSRFVMQYWVDLYARDYGGLGVVLAIYFWLAFSSAVIVMAASLAPALAQRRKGPDSGAPGIPSAPP
Ga0247661_10695162	3300024254	Soil	ARDLLPAAALTAIGIVALMIVSRFVMERWVDFYARDYGGFGVVMAIFFWIAFISAVIVWAASLSPALAQRRNLRTAG
Ga0247666_10686202	3300024323	Soil	LPGAVLTALVLVALMTVSNFVMQYWVDLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPALAARRSFRAERASSVST
Ga0247678_10695751	3300024325	Soil	LLMHKQISRRDLLPGAGLIAVGLVALMAVSRFFMQFWVDLYARDYGGLGVVLAIYFWIAICSGIIVWAASLSPALAERREARRDAAADTLPQSPHGG
Ga0207642_110523051	3300025899	Miscanthus Rhizosphere	TAFGLVALMLVSSWVMKYWVDLYARDYGGLGVVMAVFFWLGFSSVIIVWSAALAPALADRRELRRLPDSSA
Ga0207688_105753272	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG
Ga0207662_103273612	3300025918	Switchgrass Rhizosphere	MHKQIAPRDLVPGAVLTALGLIAFMVVSRFVMQFWVDFYARDYGGFGVILAIYFWILLCSGVIVWAASLSPSLAARRDLRRGRS
Ga0207652_110843991	3300025921	Corn Rhizosphere	SWRDLAPGATLSAIGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG
Ga0207664_119150441	3300025929	Agricultural Soil	PGAALTSVGIVALMVVSRYVMQFWVDLYARDYGGFGVVLALYFWIAICSGIIVWAAALSPALAERREARGASSDRTAGNGE
Ga0207690_106258002	3300025932	Corn Rhizosphere	PGATLSAIGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAARRAARG
Ga0207709_103090441	3300025935	Miscanthus Rhizosphere	MLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWATAVSPPLAARRAARG
Ga0207665_100698774	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VAWRDLVPSAVLTALALVVLIVASRFVFEPWVDLYTRDYGGLGVVMAIFFWLSAAAGIVVAAASLAPALAVRRARS
Ga0207712_108830992	3300025961	Switchgrass Rhizosphere	AAVTAVALVALMLISSFVMELWVNLYARDYGGFGVVMAIFFWIALSSAIVVWASAVSPPLAARRAARS
Ga0207677_107801401	3300026023	Miscanthus Rhizosphere	VLTALAVVGLMIVSNFVMQFWVDLYARDYGGFGVVLAIYFWIAFSSAVIVGAASLSPALAARRSLRAERASSAAT
Ga0207702_124882541	3300026078	Corn Rhizosphere	HKQISRRDLLQGAGLIAVGLVALMAVSRFFMQFWVDLYARDYGGLGVVLAIYFWIAICSGIIVWAASLSPALAERREARRDAAADTLPQSPHGG
Ga0207641_110122792	3300026088	Switchgrass Rhizosphere	VALMLVSSFVMELWVNLYARDYGGFGVVLAIYFWILFSSGIIVWAASLSPALAERRDLRQRR
Ga0209234_11888352	3300026295	Grasslands Soil	MILSGFVMEFWVNLYARDYGGFGVVMAIFFWIALSSAVVVGAASVSVPLAERRRLLHSSATETTEDT
Ga0209265_10701263	3300026308	Soil	LTHRQLSPRDLLPGGALTALALVGLMVVSNFVMQFWVDLYARDYGGLGVVLAIYFWIAFSSGLIVAAASLSPALADRRDLRGGQSRRPAA
Ga0209112_102195382	3300027817	Forest Soil	MFANIGWGEMLVLLVVGLVVLMIVSRYVMQFWVDLYAKDYGGFGVVLAIYFWIAFSSALIVWTASLSP
Ga0209465_104168011	3300027874	Tropical Forest Soil	LAHKRLALRNFLPGAGITALALVVLMVVSRFVMQYWVDLYARDYGGLGVVLAIYFWIAFSSAVIVWAASLSPPLSERRTLKHTDGPRR
Ga0209488_110594872	3300027903	Vadose Zone Soil	QIAPRDLVPGAALTALGLVALMVVSRFVMQYWVDLYARDYGGLGVVLAIYFWIAICSGIIVWAASLSPALAERREVRSSASVGG
Ga0247662_10903742	3300028293	Soil	LALVVLMVVSRFVMQYWVDLYARDYGGFGVVLAIYFWIAFSSAVIVGAASLSPALSERRSVRATSAGATDAGP
Ga0307499_101708892	3300031184	Soil	IGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAGRRAARG
Ga0310886_110731331	3300031562	Soil	VLTAVGLVALMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRI
Ga0318573_101690644	3300031564	Soil	PWFLTHRRLAPSDVLPSAVLTALALVALIVVSRFVMQFWVDIYARDYGGLGVVLAIYFWLAIASGAIVWAASLAPALAERRKVRSRN
Ga0318493_106307562	3300031723	Soil	TALGLVVLMIASSYVMQLWLDLYARDYGGFGVVMAIYFWLAFSSAVIVWAAAISPALAQRRELRR
Ga0318502_101247341	3300031747	Soil	LVVIMFVSRYLMQFWIDLYAADYGGLGVVLAIYFWLAFSSGAIVWAAALSPALAARREFRRNA
Ga0318535_103169461	3300031764	Soil	AALVVIMFVSRYLMQFWIDLYAADYGGLGVVLAIYFWLAFSSGAIVWAAALSPALAARREFRRNA
Ga0318554_106610471	3300031765	Soil	VLIVSSYFMERWVDLYARDYGGFGVVMAIFFWIQLCAAIVVAAASLSPSLARRREVRERR
Ga0318554_106706581	3300031765	Soil	LTAAALVVIMFVSRYLMQFWIDLYAADYGGLGVVLAIYFWLAFSSGAIVWAAALSPALAARREFRRNA
Ga0318546_105331161	3300031771	Soil	LMLISSLIMQFWVDLYARDFGGLGVVLAIYFWIAFSSGVIVWAASISPALAQRRSLTQATSTLP
Ga0318568_108118313	3300031819	Soil	PSDVLPSAVLTALALVVLIVVSRFVMQFWVDLYARDYGGLGVVLAIYFWLAIASGAIVWAASLAPALAVRRKVRSRN
Ga0318517_101666001	3300031835	Soil	VVLMIASSYVMQLWLDLYARDYGGFGVVMAIYFWLAFSSAVIVWAAAISPALAQRRELRR
Ga0318575_101529491	3300032055	Soil	AVGLVLLMLISSLIMQFWVDLYARDFGGLGVVLAIYFWIAFSSGVIVWAASISPALAQRRSLTQATSTLP
Ga0318510_102458151	3300032064	Soil	LPGAVLTAVGLVLLMVISRYVMQFWVDLYAQDYGGLGVMLAIYFWLAFSSAVIVWAASLSPALAERRAFRRRS
Ga0318525_103540992	3300032089	Soil	VLTAVGLVLLMLISSLIMQFWVDLYARDFGGLGVVLAIYFWIAFSSGVIVWAASISPALAQRRSLTQATSTLP
Ga0318525_106540721	3300032089	Soil	RRDLLPGAVLTAFGLVLLMLISSLIMQFWVDLYARDYGGLGVVLAIYFWIAFSSAVIVMAASISPALAQRRRLTEAATVIGQSPSG
Ga0307470_117004692	3300032174	Hardwood Forest Soil	LSAVGVVALMLVSSVVMELWVNLYARDYGGFGVVMAIFFWIAISSAIVVWAAAVSPPLAERRAARG
Ga0307471_1043439561	3300032180	Hardwood Forest Soil	VLTALGLIALMVVSRFVMQFWVDLYARDYGGLGVVLAIYFWIAFSSAIIVWAASLSPPLSERRTLKHADAPRR
Ga0310896_102602543	3300032211	Soil	LPGAVLTAVGLVVLMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRI
Ga0335080_120581032	3300032828	Soil	SRRDVLPGAVLTAFGLVVLMVASSWVMELWIDFYARDYGGLGVVMAIFFWLGFSSTVIVLSASLAPALARRRELVGAPVAQA
Ga0335081_119080331	3300032892	Soil	SAVLTASGLVVLMMISRYVMQFWVDLYAKDYGGLGVVLAIYFWIALSSGIIVWAASLSPALAVRRDLRRDGDSGRFS
Ga0335069_103712313	3300032893	Soil	PGAVLTALGLVVLMLVSSYVMEFWVDLYARDYGGFGVVLAIYFWLALSSAVIVWAASLSPALSERRDLRRQTEADRSGQRQ
Ga0335083_106444871	3300032954	Soil	RDLLPSAALTAFALVVLMMVSRYVMQFWVDLYAKDYGGLGVVLAVYFWIALSSGVIVWAASLSPALAVRRDLRREP
Ga0314864_0079667_53_250	3300033805	Peatland	MVVSRFFMQFWVDLYARDYGGLGVVLAIYFWIAFSSAAIVWAAALSPALAERREVRSGSSVDSAA
Ga0373958_0185236_326_538	3300034819	Rhizosphere Soil	GAVLTAVGLVALMLISSRVMEFWINLYARDYGGLGVVLAIYFWIAFSSAVIVGAASLSPSLAERRNLRRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences