Metagenome / Metatranscriptome Family F062055

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062055
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	72 residues
Representative Sequence	MSRLAIAVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK
Number of Associated Samples	109
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.57 %
% of genes near scaffold ends (potentially truncated)	52.67 %
% of genes from short scaffolds (< 2000 bps)	82.44 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.511 % of family members)
Environment Ontology (ENVO)	Unclassified (47.328 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.038 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 34.62% Coil/Unstructured: 48.72%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04392	ABC_sub_bind	7.63
PF08309	LVIVD	1.53
PF05598	DUF772	0.76
PF07719	TPR_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.63
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	1.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	87.02 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	61.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	60.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	59.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.66 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.66 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.76 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17041691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1144	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig507463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1467	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10020557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1812	Open in IMG/M
3300001867\|JGI12627J18819_10016410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2985	Open in IMG/M
3300002245\|JGIcombinedJ26739_100514684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1074	Open in IMG/M
3300004463\|Ga0063356_100891830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1254	Open in IMG/M
3300004633\|Ga0066395_10185802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1078	Open in IMG/M
3300005174\|Ga0066680_10609341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	682	Open in IMG/M
3300005181\|Ga0066678_10114176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1651	Open in IMG/M
3300005332\|Ga0066388_102263762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	982	Open in IMG/M
3300005332\|Ga0066388_104070461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	745	Open in IMG/M
3300005332\|Ga0066388_107628522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	542	Open in IMG/M
3300005363\|Ga0008090_15861258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2586	Open in IMG/M
3300005445\|Ga0070708_100495520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1152	Open in IMG/M
3300005467\|Ga0070706_100247251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1665	Open in IMG/M
3300005471\|Ga0070698_100508772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1142	Open in IMG/M
3300005518\|Ga0070699_100593695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1009	Open in IMG/M
3300005713\|Ga0066905_100505999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300005713\|Ga0066905_100508019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1003	Open in IMG/M
3300005764\|Ga0066903_103523926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	843	Open in IMG/M
3300005764\|Ga0066903_105331076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	679	Open in IMG/M
3300006050\|Ga0075028_100244557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300006175\|Ga0070712_100194130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1591	Open in IMG/M
3300006797\|Ga0066659_10344796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153	Open in IMG/M
3300006852\|Ga0075433_10273574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1497	Open in IMG/M
3300006854\|Ga0075425_102198682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300006854\|Ga0075425_102217882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	611	Open in IMG/M
3300006871\|Ga0075434_100152534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2331	Open in IMG/M
3300006904\|Ga0075424_100174375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2281	Open in IMG/M
3300007265\|Ga0099794_10220976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300009143\|Ga0099792_10162374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1241	Open in IMG/M
3300009147\|Ga0114129_10089480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4268	Open in IMG/M
3300009162\|Ga0075423_10047459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4413	Open in IMG/M
3300009792\|Ga0126374_11030622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300010043\|Ga0126380_11646869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300010048\|Ga0126373_12481611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	578	Open in IMG/M
3300010134\|Ga0127484_1052615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300010358\|Ga0126370_10404472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1123	Open in IMG/M
3300010358\|Ga0126370_10712513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	883	Open in IMG/M
3300010360\|Ga0126372_10320205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1374	Open in IMG/M
3300010361\|Ga0126378_12497053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	590	Open in IMG/M
3300010362\|Ga0126377_11774264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	692	Open in IMG/M
3300010366\|Ga0126379_10718860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1093	Open in IMG/M
3300010366\|Ga0126379_11138405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300010366\|Ga0126379_12748034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300010398\|Ga0126383_11970209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300012205\|Ga0137362_10908615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	752	Open in IMG/M
3300012923\|Ga0137359_11396377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300012951\|Ga0164300_10954468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012971\|Ga0126369_10628984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1146	Open in IMG/M
3300016294\|Ga0182041_12138137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300016319\|Ga0182033_10521519	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300016341\|Ga0182035_10011167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5253	Open in IMG/M
3300016357\|Ga0182032_10039067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2984	Open in IMG/M
3300016371\|Ga0182034_10007132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6056	Open in IMG/M
3300016404\|Ga0182037_10044800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2916	Open in IMG/M
3300016404\|Ga0182037_11837924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300018433\|Ga0066667_10046440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2586	Open in IMG/M
3300021088\|Ga0210404_10790944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300021168\|Ga0210406_10187473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1721	Open in IMG/M
3300021178\|Ga0210408_10113221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2136	Open in IMG/M
3300021432\|Ga0210384_10199077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1801	Open in IMG/M
3300021560\|Ga0126371_11694716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	756	Open in IMG/M
3300021560\|Ga0126371_13643284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300025939\|Ga0207665_10552083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	895	Open in IMG/M
3300026328\|Ga0209802_1158262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	944	Open in IMG/M
3300026498\|Ga0257156_1139139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	506	Open in IMG/M
3300026524\|Ga0209690_1119534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1040	Open in IMG/M
3300026532\|Ga0209160_1251117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	602	Open in IMG/M
3300027502\|Ga0209622_1004383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2220	Open in IMG/M
3300027527\|Ga0209684_1076735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300027576\|Ga0209003_1027851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300027646\|Ga0209466_1047104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	873	Open in IMG/M
3300027654\|Ga0209799_1014167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1725	Open in IMG/M
3300028047\|Ga0209526_10320454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1045	Open in IMG/M
3300031543\|Ga0318516_10040068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2514	Open in IMG/M
3300031543\|Ga0318516_10100338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1635	Open in IMG/M
3300031543\|Ga0318516_10300692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300031544\|Ga0318534_10535980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031545\|Ga0318541_10003419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6383	Open in IMG/M
3300031545\|Ga0318541_10142343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1312	Open in IMG/M
3300031545\|Ga0318541_10569945	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031546\|Ga0318538_10049553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2046	Open in IMG/M
3300031549\|Ga0318571_10018756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1781	Open in IMG/M
3300031564\|Ga0318573_10050805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2023	Open in IMG/M
3300031573\|Ga0310915_10781296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	672	Open in IMG/M
3300031668\|Ga0318542_10001290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7326	Open in IMG/M
3300031668\|Ga0318542_10224336	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300031668\|Ga0318542_10291586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300031680\|Ga0318574_10098912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1615	Open in IMG/M
3300031682\|Ga0318560_10260913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	931	Open in IMG/M
3300031713\|Ga0318496_10183681	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300031719\|Ga0306917_11061491	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300031768\|Ga0318509_10184232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300031778\|Ga0318498_10519300	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031779\|Ga0318566_10385269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	691	Open in IMG/M
3300031780\|Ga0318508_1123372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	727	Open in IMG/M
3300031792\|Ga0318529_10106567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1268	Open in IMG/M
3300031796\|Ga0318576_10023916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2461	Open in IMG/M
3300031796\|Ga0318576_10633525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300031797\|Ga0318550_10442253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	628	Open in IMG/M
3300031799\|Ga0318565_10524063	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300031805\|Ga0318497_10386054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	783	Open in IMG/M
3300031819\|Ga0318568_10066799	All Organisms → cellular organisms → Bacteria → Proteobacteria	2103	Open in IMG/M
3300031832\|Ga0318499_10149139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	912	Open in IMG/M
3300031832\|Ga0318499_10232186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031833\|Ga0310917_10032696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3089	Open in IMG/M
3300031845\|Ga0318511_10168211	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300031846\|Ga0318512_10195659	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300031860\|Ga0318495_10229486	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300031879\|Ga0306919_10242148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1354	Open in IMG/M
3300031941\|Ga0310912_10052242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2876	Open in IMG/M
3300031941\|Ga0310912_10751567	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300031942\|Ga0310916_10073173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2688	Open in IMG/M
3300031942\|Ga0310916_11417702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	568	Open in IMG/M
3300031945\|Ga0310913_10807521	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031947\|Ga0310909_10408916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300031947\|Ga0310909_11101209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300032008\|Ga0318562_10850663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300032025\|Ga0318507_10157599	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300032039\|Ga0318559_10402404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300032055\|Ga0318575_10461109	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300032060\|Ga0318505_10341255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	708	Open in IMG/M
3300032060\|Ga0318505_10449081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	609	Open in IMG/M
3300032064\|Ga0318510_10038004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1650	Open in IMG/M
3300032066\|Ga0318514_10386844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	742	Open in IMG/M
3300032068\|Ga0318553_10426454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	694	Open in IMG/M
3300032090\|Ga0318518_10218626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	976	Open in IMG/M
3300032094\|Ga0318540_10519508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	574	Open in IMG/M
3300032180\|Ga0307471_100450785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1426	Open in IMG/M
3300032261\|Ga0306920_102734181	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.89%
Host-Associated	Host-Associated	6.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.13%
Plants	Host-Associated → Plants	6.11%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.34%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.34%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03186690	2088090014	Soil	MVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
KansclcFeb2_06621600	2124908045	Soil	MSRIAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
AF_2010_repII_A1DRAFT_100205573	3300000597	Forest Soil	MSRLAIAVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK*
JGI12627J18819_100164105	3300001867	Forest Soil	MSRLAIAVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTSRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
JGIcombinedJ26739_1005146842	3300002245	Forest Soil	MPRLAIMVVAAICFLWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK*
Ga0063356_1008918303	3300004463	Arabidopsis Thaliana Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0066395_101858022	3300004633	Tropical Forest Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAG
Ga0066680_106093412	3300005174	Soil	MSRIAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFH
Ga0066678_101141762	3300005181	Soil	MRLLPVVPVSEAASKCTSVQTQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0066388_1022637621	3300005332	Tropical Forest Soil	MSRLAIVVVGAVRFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKCK*
Ga0066388_1040704611	3300005332	Tropical Forest Soil	MSRLAIVVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFDDCVSRKLSQKRK*
Ga0066388_1076285222	3300005332	Tropical Forest Soil	MSRLAIVVVGAVCFLLIPVSEAASKCTSGQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK*
Ga0008090_158612581	3300005363	Tropical Rainforest Soil	MPRLAIAVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK*
Ga0070708_1004955202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0070706_1002472514	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLPQRK*
Ga0070698_1005087721	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0070699_1005936951	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLAIAVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYM
Ga0066905_1005059993	3300005713	Tropical Forest Soil	MSRLAIVVGGTVCFLWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQQRK*
Ga0066905_1005080192	3300005713	Tropical Forest Soil	MLRPAIAVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYKGKIAGGTTVLFHECISRKSSQKRK*
Ga0066903_1035239261	3300005764	Tropical Forest Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKV
Ga0066903_1053310762	3300005764	Tropical Forest Soil	MSRLAIVVGGTVCFLWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKV
Ga0075028_1002445574	3300006050	Watersheds	MPRLAIVVVGAVGFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0070712_1001941301	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYM
Ga0066659_103447962	3300006797	Soil	MSRPAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0075433_102735741	3300006852	Populus Rhizosphere	MSLLAIMVVGCVCFLWVPVSEAASKCTSVQAQSAVEIGGQCDPDTGRWFYGRYMGKVAGGTKVAFHDCV
Ga0075425_1021986822	3300006854	Populus Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGK
Ga0075425_1022178821	3300006854	Populus Rhizosphere	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYM
Ga0075434_1001525344	3300006871	Populus Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQSAVEIGGQCDPDTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0075424_1001743753	3300006904	Populus Rhizosphere	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQSAVEIGGQCDPDTGRWFYGRYMG
Ga0099794_102209761	3300007265	Vadose Zone Soil	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDLNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0099792_101623741	3300009143	Vadose Zone Soil	VCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK*
Ga0114129_100894802	3300009147	Populus Rhizosphere	MVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRCMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0075423_100474592	3300009162	Populus Rhizosphere	MVVGCVCFLWVPVSEAASKCTSVQAQSAVEIGGQCDPDTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0126374_110306222	3300009792	Tropical Forest Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAECAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHDCVSRKLSQKRK*
Ga0126380_116468691	3300010043	Tropical Forest Soil	MSRLAIVVGGAVCFLWIPVSEAASKCTSIQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVTFHD
Ga0126373_124816112	3300010048	Tropical Forest Soil	VQPSVIVSPYNARHKEGDISRLAIVVIGAVCFLLIPVSEAVSKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKAAGGNTTAFHDCVSRKLSQKRK*
Ga0127484_10526151	3300010134	Grasslands Soil	MVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0126370_104044723	3300010358	Tropical Forest Soil	MSRLAIVVGGAVCFLWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQQRK*
Ga0126370_107125132	3300010358	Tropical Forest Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGDNTMAFHDCVSRKLSQNESDRNSAIRRVL*
Ga0126372_103202052	3300010360	Tropical Forest Soil	MSRLAIVVIGAVCFLLIPVSEAVSKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKAAGGNTTAFHDCVSRKLSQKRK*
Ga0126378_124970531	3300010361	Tropical Forest Soil	MSRLAIVVGGAVYLLWIPVREAASKCTSIQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVPFHDCISRKSSQKRK*
Ga0126377_117742641	3300010362	Tropical Forest Soil	MSRLAIVVVGAICFLLIPVSEAASKCTSVQAQCAVEIAGQCDPNTGRWFYGRYTGRAAGGNTMAFH
Ga0126379_107188602	3300010366	Tropical Forest Soil	MSRLAIVVVGAVCFLLIPVSEAASKCTSGQAQCAAEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK*
Ga0126379_111384052	3300010366	Tropical Forest Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK*
Ga0126379_127480341	3300010366	Tropical Forest Soil	VVIGAVCFLLIPVSEAVSKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKAAGGNTTAFHDCVSRKLSQKRK*
Ga0126383_119702091	3300010398	Tropical Forest Soil	MVVGCVCFLRIPISEAASKCTSVQAQCAVEIGGQCDSTTGRWFYGRYMGKVAGGTKAAFHDCISRKLSQKRK*
Ga0137362_109086151	3300012205	Vadose Zone Soil	MSRLAMMVVGCVCFLWVPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK*
Ga0137359_113963772	3300012923	Vadose Zone Soil	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVQIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0164300_109544681	3300012951	Soil	MSRLAIMVVGCVCFLWVPVSEAASNCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK*
Ga0126369_106289843	3300012971	Tropical Forest Soil	MSRLAIVAIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHDYVSRKLSQKRK*
Ga0182041_121381371	3300016294	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGG
Ga0182033_105215191	3300016319	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVA
Ga0182035_100111675	3300016341	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTGVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0182032_100390671	3300016357	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIDGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK
Ga0182034_100071321	3300016371	Soil	VGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0182037_100448006	3300016404	Soil	LIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0182037_118379242	3300016404	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMG
Ga0066667_100464405	3300018433	Grasslands Soil	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0210404_107909442	3300021088	Soil	MPRLAIMVVAAICFPWTPVSEAASNCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGK
Ga0210406_101874733	3300021168	Soil	MPRLAIMVVAAICFPWTPVSEAASNCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0210408_101132213	3300021178	Soil	MPRLAIVVVGAVGFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0210384_101990773	3300021432	Soil	MPRLAIMVVAAICFPWTPVSEAASNCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0126371_116947161	3300021560	Tropical Forest Soil	MSRLAIVAIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHD
Ga0126371_136432841	3300021560	Tropical Forest Soil	GDMSRLAIVVIGAVCFLLIPVSEAASKCTSVQAECAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHDCVSRKLSQKRK
Ga0207665_105520831	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0209802_11582623	3300026328	Soil	IAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0257156_11391392	3300026498	Soil	HKEEDMSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0209690_11195343	3300026524	Soil	WVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0209160_12511171	3300026532	Soil	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRK
Ga0209622_10043832	3300027502	Forest Soil	MSRLAIAVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTSRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0209684_10767351	3300027527	Tropical Forest Soil	MSRLAIVVVGAVCFLLIPVSEAVSKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKAAGGNTTAFHDCVSRKLSQKRK
Ga0209003_10278511	3300027576	Forest Soil	LQPSVILSSYNARHKEGDMSRLAIAVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTSRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0209466_10471042	3300027646	Tropical Forest Soil	MLRPAIAVVGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYKGKITGGTTVLFHECISRKSSQKRK
Ga0209799_10141672	3300027654	Tropical Forest Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKAAGGNTTAF
Ga0209526_103204542	3300028047	Forest Soil	MSRLAIMVVGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLPQRK
Ga0318516_100400682	3300031543	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVSRKLSQKPR
Ga0318516_101003381	3300031543	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNT
Ga0318516_103006922	3300031543	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0318534_105359803	3300031544	Soil	FLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0318541_100034192	3300031545	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0318541_101423432	3300031545	Soil	MPRRAIMVVGAVCFPWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0318541_105699452	3300031545	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGR
Ga0318538_100495533	3300031546	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYMGRVAGGNTMAFHDCVSRKLSQKRK
Ga0318571_100187562	3300031549	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGEVAGGTKVAFHNCVSRKLSQKRK
Ga0318573_100508054	3300031564	Soil	MSRLAIVVVGAVCFLLIPIREAASKCTGVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0310915_107812961	3300031573	Soil	MSRLAIMVIGCVCFLWVPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQRK
Ga0318542_100012908	3300031668	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHNCVSRKLSQKRK
Ga0318542_102243361	3300031668	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYMGRVARGNTM
Ga0318542_102915863	3300031668	Soil	IMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0318574_100989122	3300031680	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTAFQAQCAVEIGGQCDPNTGRWFYGRYMGRVAGGNTIAFHDCVSRKLSQKRK
Ga0318560_102609132	3300031682	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGGYMGKVAGGTKVAFHNCVSRKLSQKRK
Ga0318496_101836812	3300031713	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYM
Ga0306917_110614911	3300031719	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGG
Ga0318509_101842321	3300031768	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTK
Ga0318498_105193001	3300031778	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTAFQAQCAVEIGGQCDPNTGRWFYGRYM
Ga0318566_103852692	3300031779	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHDRVSRKLS
Ga0318508_11233721	3300031780	Soil	SYNARHKEGDMSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVSRKLSQKPR
Ga0318529_101065671	3300031792	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK
Ga0318576_100239165	3300031796	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYMGRVAGGNTIAFHDCVSRKLSQKRK
Ga0318576_106335252	3300031796	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTK
Ga0318550_104422531	3300031797	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYVGRAAGGSTMAFHDC
Ga0318565_105240631	3300031799	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYMGRVARG
Ga0318497_103860543	3300031805	Soil	VCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0318568_100667994	3300031819	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYVGRAA
Ga0318499_101491392	3300031832	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVSRKLSQKPR
Ga0318499_102321861	3300031832	Soil	PAAIGDILLYDARHKEGDMSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0310917_100326965	3300031833	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTAFQAQCAVEIGGQCDPNTGRWFYGRYMGRVARGNTMAFHDCVSRKLSQKRK
Ga0318511_101682111	3300031845	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYV
Ga0318512_101956591	3300031846	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYM
Ga0318495_102294862	3300031860	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKL
Ga0306919_102421482	3300031879	Soil	MIPAAIGDILLYDAHHKEGDMSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0310912_100522426	3300031941	Soil	SRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHNCVSRKLSQKRK
Ga0310912_107515672	3300031941	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFH
Ga0310916_100731736	3300031942	Soil	IVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVSRKLSQKPR
Ga0310916_114177021	3300031942	Soil	HKESDMSRLAIVVVGAVCFLLIPVSEAASKCTSGQAQCAVEIGGQCDPNTGRWFYGRYMGKLAGGTTVAFHDCVSRKLSQKRK
Ga0310913_108075212	3300031945	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMG
Ga0310909_104089161	3300031947	Soil	AIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVAFHDCVSRKLSQKRK
Ga0310909_111012091	3300031947	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNTM
Ga0318562_108506631	3300032008	Soil	DILLYDAHHKEGDMSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0318507_101575992	3300032025	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRY
Ga0318559_104024042	3300032039	Soil	MSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVPRK
Ga0318575_104611092	3300032055	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRA
Ga0318505_103412551	3300032060	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGRAAGGNTMAFHDCV
Ga0318505_104490811	3300032060	Soil	MSRLAIVVIGAVCFLWIPVSEAASKCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVSRKLSQKP
Ga0318510_100380044	3300032064	Soil	ILLYDARHKEGDMSRLAIVVVGAVCFLLIPISEAASKCTSVQAQCAVEIGGQCDPILADGFMEGIWGKVAGGTKVAFHNCVSRKLSQKRK
Ga0318514_103868441	3300032066	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYGRYMGKVAGGTKVSFHDCVS
Ga0318553_104264541	3300032068	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSFQAQCAVEIGGQCDPNTGRWFYGRYMGRVARGNTMAFHD
Ga0318518_102186261	3300032090	Soil	VILSSYNARHKEGDMSRLAIVVIGAVCFLLIPVSEAASKCTAFQAQCAVEIGGQCDPNTGRWFYGRYMGRVAGGNTIAFHDCVSRKLSQKRK
Ga0318540_105195082	3300032094	Soil	MSRLAIVVIGAVCFLLIPVSEAASKCTSVQAQCAVEIGGQCDPNTGRWFYGRYVGRAAGGRTMAFHD
Ga0307471_1004507852	3300032180	Hardwood Forest Soil	MSRLAIMVVGCVCFLWIPVSEAASNCTSVQAQCAVEIGGQCDPNTGRWFYGRYMGKVAGGTKVAFHDCVSRKSSQRK
Ga0306920_1027341812	3300032261	Soil	MPRRAIMVVGAVCFPWIPVSEAASNCTSVQAQCAVEIGGQCDPTTGRWFYG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences