Metagenome Family F062036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062036
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	60 residues
Representative Sequence	KKNLSTRNIPVVISTAWTTACNVGDRVDRALKAGAEEILYKPFHSTMLRDVLRTYLLA
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	96.18 %
% of genes from short scaffolds (< 2000 bps)	95.42 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.420 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.847 % of family members)
Environment Ontology (ENVO)	Unclassified (30.534 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.56% β-sheet: 9.30% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	9.16
PF04679	DNA_ligase_A_C	4.58
PF13379	NMT1_2	3.05
PF00583	Acetyltransf_1	3.05
PF07238	PilZ	3.05
PF04392	ABC_sub_bind	2.29
PF01370	Epimerase	2.29
PF02515	CoA_transf_3	1.53
PF09084	NMT1	1.53
PF00924	MS_channel	0.76
PF01068	DNA_ligase_A_M	0.76
PF01327	Pep_deformylase	0.76
PF00254	FKBP_C	0.76
PF13380	CoA_binding_2	0.76
PF14535	AMP-binding_C_2	0.76
PF02776	TPP_enzyme_N	0.76
PF13855	LRR_8	0.76
PF00248	Aldo_ket_red	0.76
PF01694	Rhomboid	0.76
PF12728	HTH_17	0.76
PF01609	DDE_Tnp_1	0.76
PF00892	EamA	0.76
PF11700	ATG22	0.76
PF05598	DUF772	0.76
PF02384	N6_Mtase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	5.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.29
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.53
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.53
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.53
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.76
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.76
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.76
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.76
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.76
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.42 %
Unclassified	root	N/A	4.58 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.49 %
Unclassified	root	N/A	4.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.76 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	54.96 %
Unclassified	root	N/A	4.58 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	54.96 %
Unclassified	root	N/A	4.58 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	53.44 %
Unclassified	root	N/A	4.58 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.76 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.76 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	53.44 %
Unclassified	root	N/A	4.58 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.76 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.76 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	53.44 %
Unclassified	root	N/A	4.58 %
Frigoriglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus	0.76 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.76 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	53.44 %
Unclassified	root	N/A	4.58 %
Frigoriglobus tundricola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	0.76 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.76 %
Galbibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Galbibacter	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	53.44 %
Unclassified	root	N/A	4.58 %
Galbibacter marinus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Galbibacter → Galbibacter marinus	0.76 %
Frigoriglobus tundricola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	0.76 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10093384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10115524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1055959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10026368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1376	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10075163	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300003992\|Ga0055470_10056722	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300004015\|Ga0055462_10145267	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300004015\|Ga0055462_10177617	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300004050\|Ga0055491_10076629	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300004061\|Ga0055487_10018582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	940	Open in IMG/M
3300004268\|Ga0066398_10062988	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300004463\|Ga0063356_103705150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300004808\|Ga0062381_10444224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300005186\|Ga0066676_10130244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1562	Open in IMG/M
3300005205\|Ga0068999_10135630	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005218\|Ga0068996_10177245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300005294\|Ga0065705_10215987	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005294\|Ga0065705_10390212	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005332\|Ga0066388_104209826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300005439\|Ga0070711_100788086	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005444\|Ga0070694_100818845	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005445\|Ga0070708_101007433	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005447\|Ga0066689_10278254	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300005555\|Ga0066692_10381077	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005713\|Ga0066905_101754381	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005719\|Ga0068861_100324582	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005764\|Ga0066903_102566962	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005764\|Ga0066903_105898943	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005873\|Ga0075287_1067171	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Galbibacter → Galbibacter marinus	510	Open in IMG/M
3300006175\|Ga0070712_101356549	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006797\|Ga0066659_10465545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1007	Open in IMG/M
3300006797\|Ga0066659_10782755	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300006844\|Ga0075428_100271830	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300006847\|Ga0075431_100624339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1060	Open in IMG/M
3300006852\|Ga0075433_11890982	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006880\|Ga0075429_100456714	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1119	Open in IMG/M
3300006904\|Ga0075424_101563745	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006904\|Ga0075424_101687412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300006918\|Ga0079216_10089247	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300009100\|Ga0075418_10533535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1261	Open in IMG/M
3300009156\|Ga0111538_13962659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300009157\|Ga0105092_10590456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300009167\|Ga0113563_13574344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300009792\|Ga0126374_10616856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300010043\|Ga0126380_12198604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300010046\|Ga0126384_10505600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1042	Open in IMG/M
3300010046\|Ga0126384_11032464	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010046\|Ga0126384_11526775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300010046\|Ga0126384_11887014	Not Available	569	Open in IMG/M
3300010047\|Ga0126382_10337915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1148	Open in IMG/M
3300010047\|Ga0126382_10738055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300010047\|Ga0126382_11295296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300010047\|Ga0126382_11475121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300010047\|Ga0126382_11930399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300010047\|Ga0126382_12020844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300010358\|Ga0126370_10511515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1017	Open in IMG/M
3300010359\|Ga0126376_10382762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1260	Open in IMG/M
3300010360\|Ga0126372_10100141	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300010360\|Ga0126372_12165442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300010361\|Ga0126378_10546079	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300010366\|Ga0126379_10150742	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300010376\|Ga0126381_100795312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1358	Open in IMG/M
3300010391\|Ga0136847_12828392	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010398\|Ga0126383_10287308	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300010398\|Ga0126383_10872595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300010398\|Ga0126383_11144339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	868	Open in IMG/M
3300010400\|Ga0134122_10932001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300010400\|Ga0134122_11458469	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300011434\|Ga0137464_1079104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	950	Open in IMG/M
3300012034\|Ga0137453_1060120	Not Available	706	Open in IMG/M
3300012038\|Ga0137431_1080129	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300012159\|Ga0137344_1090952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300012173\|Ga0137327_1054090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	882	Open in IMG/M
3300012201\|Ga0137365_11184401	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012349\|Ga0137387_11105714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300012358\|Ga0137368_10892474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300012532\|Ga0137373_10550048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300012922\|Ga0137394_11374027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300012931\|Ga0153915_10659692	Not Available	1206	Open in IMG/M
3300012948\|Ga0126375_10903023	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012948\|Ga0126375_11460427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300012971\|Ga0126369_13462510	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300014313\|Ga0075347_1024443	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	1142	Open in IMG/M
3300014320\|Ga0075342_1248109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300014861\|Ga0180061_1022273	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300014877\|Ga0180074_1064129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300015372\|Ga0132256_101097071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	910	Open in IMG/M
3300015373\|Ga0132257_100415102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1638	Open in IMG/M
3300016294\|Ga0182041_11131457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300016319\|Ga0182033_10109124	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300016319\|Ga0182033_11850868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300016357\|Ga0182032_10661405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	874	Open in IMG/M
3300017966\|Ga0187776_10351672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300018051\|Ga0184620_10134765	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018063\|Ga0184637_10501750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300018064\|Ga0187773_10229584	Not Available	1003	Open in IMG/M
3300018064\|Ga0187773_10407424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300018068\|Ga0184636_1322186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300018072\|Ga0184635_10002105	All Organisms → cellular organisms → Bacteria	5972	Open in IMG/M
3300018072\|Ga0184635_10149193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	933	Open in IMG/M
3300018073\|Ga0184624_10382976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300018078\|Ga0184612_10197995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1044	Open in IMG/M
3300018083\|Ga0184628_10173555	Not Available	1125	Open in IMG/M
3300018084\|Ga0184629_10112219	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300018431\|Ga0066655_10222643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1184	Open in IMG/M
3300018468\|Ga0066662_11867791	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300020195\|Ga0163150_10346261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300021081\|Ga0210379_10327387	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300021090\|Ga0210377_10206493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1248	Open in IMG/M
3300021560\|Ga0126371_12940165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300025916\|Ga0207663_11474855	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300025930\|Ga0207701_11530801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300025959\|Ga0210116_1068216	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300025972\|Ga0207668_10239348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1468	Open in IMG/M
3300026028\|Ga0208420_1018429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300027006\|Ga0209896_1015247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300027717\|Ga0209998_10051491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	954	Open in IMG/M
3300027907\|Ga0207428_10718587	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300028145\|Ga0247663_1016374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300031538\|Ga0310888_10828109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300031716\|Ga0310813_11377271	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031720\|Ga0307469_10129040	All Organisms → cellular organisms → Bacteria → Proteobacteria	1847	Open in IMG/M
3300031740\|Ga0307468_100071084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1933	Open in IMG/M
3300031820\|Ga0307473_10035498	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300031833\|Ga0310917_10804423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300031954\|Ga0306926_11638276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	737	Open in IMG/M
3300032144\|Ga0315910_11255065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300032261\|Ga0306920_104474421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300033414\|Ga0316619_12131646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300034165\|Ga0364942_0004496	Not Available	4167	Open in IMG/M
3300034176\|Ga0364931_0226868	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.55%
Host-Associated	Host-Associated	11.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.12%
Aquatic	Environmental → Aquatic	24.43%
Plants	Host-Associated → Plants	11.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.60%
Sediment	Environmental → Aquatic → Sediment	12.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.40%
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Marine	Environmental → Aquatic → Marine	6.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.05%
Floodplain	Environmental → Terrestrial → Floodplain	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.21%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.87%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.29%
Lake	Environmental → Aquatic → Freshwater → Lake	1.53%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.29%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.11%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.29%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.53%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.76%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026028	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100933841	3300000597	Forest Soil	NLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
AF_2010_repII_A1DRAFT_101155241	3300000597	Forest Soil	RLKRNVSTRNIPVVINTAWTTSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLT
AF_2010_repII_A100DRAFT_10559591	3300000655	Forest Soil	NIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
AF_2010_repII_A001DRAFT_100263681	3300000793	Forest Soil	STRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
AF_2010_repII_A001DRAFT_100751631	3300000793	Forest Soil	GDEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0055470_100567221	3300003992	Natural And Restored Wetlands	GDEVTARLKAKLSTRSIPVVINSGWTTACNVEERINRALNAGAEEVLYKPFQLPMLRNILRTYLFA*
Ga0055462_101452671	3300004015	Natural And Restored Wetlands	VTVRLKSNRTTRNIPVVINTGWTTACNIEARIDRALNAGAAEILYKPLQFPMLRDVLRTYLMA*
Ga0055462_101776171	3300004015	Natural And Restored Wetlands	VTMRLKSNRSTRNIPVVINTGWTTTCNVEARIERALNAGAVEVLYKPLQFPMVRNVLRSYLMA*
Ga0055491_100766292	3300004050	Natural And Restored Wetlands	EVTAKLKSNSATRNIPVVINTGWTTSCNVEDRIHRALNAGAAEIMYKPIQMPELRGVLRNYLLAC*
Ga0055487_100185822	3300004061	Natural And Restored Wetlands	INTGWTTSCNVEDRIHRALNAGAAEIMHKPIQMPELRGVLRNYLLAC*
Ga0066398_100629883	3300004268	Tropical Forest Soil	RNIPVVINTAWSMSCNVGDRAYRALDAGAEEILYKPFHLTTLRDVLRTYLLA*
Ga0063356_1037051501	3300004463	Arabidopsis Thaliana Rhizosphere	SNRSTRNIPVVINTGWTTACNIEARVERARVAGAAEVLYKPLQFPMLRNILRSYLMV*
Ga0062381_104442242	3300004808	Wetland Sediment	VTVKLKANRATRNIPVVINSGWTTACNVEDRIHRALNAGAAEIMYKPIQMPELRGVLRNYLMAS*
Ga0066676_101302441	3300005186	Soil	VTAQLKKNMSTRNIPVVINTSWTTDCNVEKRVDRALNAGAAEVLYKPFQLAVLRDVLRNHLLA*
Ga0068999_101356302	3300005205	Natural And Restored Wetlands	TVKLKSNRSTRNIPVVINTGWTTTCNVEDRINRALNAGAAEILYKPFQIPTLRDVLRNYLLASAD*
Ga0068996_101772452	3300005218	Natural And Restored Wetlands	NSATRNIPVVINTGWTTSCNVEDRIHRALNAGAAEIMYKPIQMPELRGVLRNYLLAC*
Ga0065705_102159871	3300005294	Switchgrass Rhizosphere	MTGDEVTKKLKTNMSTRNIPVVINSGWTTACNVEERISRALLAGAAEVLYKPFQFATLRGVLRSYLFA*
Ga0065705_103902123	3300005294	Switchgrass Rhizosphere	RNIPVVINTAWTTSCNVGDRADRALEAGAEEILYKPFHLTTLRDVLRTYLLA*
Ga0066388_1042098261	3300005332	Tropical Forest Soil	PVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0070711_1007880861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	STRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA*
Ga0070694_1008188452	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSTRNIPVVINSGWTTACNVEERISRALLAGAAEVLYKPFQFATLRGVLRSYLFA*
Ga0070708_1010074332	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HGDEVTARLKKNMSTRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA*
Ga0066689_102782543	3300005447	Soil	KRNLSTRNIPVVISTGWTTVCNVGDRVDRALDAGAAEILYKPFHLTMLLDVLRTYL*
Ga0066692_103810772	3300005555	Soil	QLKKNMSTRNIPVVINTSWTTDCNVEKRVDRALNAGAAEVLYKPFQLAVLRDVLRNHLLA
Ga0066905_1017543811	3300005713	Tropical Forest Soil	KKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0068861_1003245821	3300005719	Switchgrass Rhizosphere	GDEVTARLKKNMSTRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA*
Ga0066903_1025669623	3300005764	Tropical Forest Soil	ARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0066903_1058989432	3300005764	Tropical Forest Soil	MYGDEVTARLKKTISTRNIPVIINSGWATACNVEERTHRALNAAAEEILYKPVQLPILRDILRSYLFA*
Ga0075287_10671711	3300005873	Rice Paddy Soil	NGDEATARLKAKMSTRNIPILINTGWTTACNIEERANRALLAGAAEILYKPFHLSMLRDVLRTYLF*
Ga0070712_1013565493	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DEATVRLKRNMSTRNIPVIISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0066659_104655453	3300006797	Soil	MSTRNIPVVINTSWTTDCNVEKRVDRALNAGAAEVLYKPFQLAVLRDVLRNHLLA*
Ga0066659_107827551	3300006797	Soil	EATVRLKRNLSTRNIPVVISTAWTTACNVGDRANRALDAGAAEILYKPFHLTMLRDVLRTYLLA*
Ga0075428_1002718302	3300006844	Populus Rhizosphere	STRNIPVVINTSWNMSCNVGDRVDRALNAGAEEILYKPYHLSTLRGVLRTYLMTSDSQ*
Ga0075431_1006243391	3300006847	Populus Rhizosphere	GDEVTIQLKRNTSTRNIPLVLISGWTTDCNVEERANRALNAGAAEILYRPFQLPLLRDVLRTHLLAA*
Ga0075433_118909822	3300006852	Populus Rhizosphere	MMIESGWIVDCNVEERPRALNSGAVEVLSKPFQLPILRDVLRTYLFA*
Ga0075429_1004567142	3300006880	Populus Rhizosphere	NGDEVTARLKRNMSTRHIPVVINAAWTMACNIEERIHRALNAGAEEILYKPFQFPMLRDVLRTYLLA*
Ga0075424_1015637451	3300006904	Populus Rhizosphere	TRHIPVVINAAWTMACNIEERIHRALNAGAEEILYKPFQFPMLRDVLRTYLLA*
Ga0075424_1016874121	3300006904	Populus Rhizosphere	PVVINTGWTTACNVEERANRALIAGAAEILYKPFHFPMLRDVLRSHLSA*
Ga0079216_100892473	3300006918	Agricultural Soil	DEVTRQLKKNLSTRQIPIVINTGWTTACNIEERIERALIAGASEVLYRPLQFPMLRDVMRTYLFA*
Ga0075418_105335351	3300009100	Populus Rhizosphere	RLKRNMSTRNIPVIINSGWTTACNVEERIHRALTSGAEEILYKPFQLPMLRDVLRTYLFA
Ga0111538_139626591	3300009156	Populus Rhizosphere	RLKRNMSTRHIPVVINAAWTMACNIEERIHRALNAGAEEILYKPFQFPMLRDVLRTYLLA
Ga0105092_105904563	3300009157	Freshwater Sediment	TRNIPVVINTSWSMSCNVGDRVDRALNAGAEEILYKPYHLSTLRGVLRTYLMTSDSQ*
Ga0113563_135743442	3300009167	Freshwater Wetlands	VINTGWTTSCNVEDRIHRALNAGAAEIMYKPIQMPELRGVLRNYLLAC*
Ga0126374_106168562	3300009792	Tropical Forest Soil	EATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126380_121986041	3300010043	Tropical Forest Soil	KNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126384_105056002	3300010046	Tropical Forest Soil	LKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126384_110324641	3300010046	Tropical Forest Soil	NIPVVINTAWTTSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLT*
Ga0126384_115267751	3300010046	Tropical Forest Soil	GDEATARLKRNVSTRNIPVVINTAWTTSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLT*
Ga0126384_118870141	3300010046	Tropical Forest Soil	IPVVINTAWSMSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLA*
Ga0126382_103379153	3300010047	Tropical Forest Soil	DEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHTTMLRDVLRTYLLA*
Ga0126382_107380552	3300010047	Tropical Forest Soil	ARIKKNLSTRNIPVLISTAWTTACNVGDRVDRALKAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126382_112952961	3300010047	Tropical Forest Soil	AQLKKSTVTRNIPVILSTGWTTACNVEEKIERALRAGADEILYRPLQFPLLRNVLRSYLFA*
Ga0126382_114751212	3300010047	Tropical Forest Soil	GMNGDEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126382_119303992	3300010047	Tropical Forest Soil	GMNGDEVTAQLKRNTSTRNIPVILNTGWTTACNVEERINRALNAGADEILYRPLQFPMLRNVLRAYLFA*
Ga0126382_120208441	3300010047	Tropical Forest Soil	KKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDILRTYLLA*
Ga0126370_105115151	3300010358	Tropical Forest Soil	MTEMRLPEFYGDELTVRLKKNIATRNIPVIINAGWTTDCHVEERIDRALNAGAAEVLYRPFQLPILRGVLRSHLLA*
Ga0126376_103827621	3300010359	Tropical Forest Soil	DEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHTTMLRDVLRTYLFA*
Ga0126372_101001411	3300010360	Tropical Forest Soil	PVVINTAWSMSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLA*
Ga0126372_121654421	3300010360	Tropical Forest Soil	KNLSTRNIPVLISTAWTTACNIGDRVDRALEAGAEEILYKPFHTTMLRDVLRTYLLA*
Ga0126378_105460793	3300010361	Tropical Forest Soil	TRNIPVVISTAWTTACNIGDRVDRALEAGAEEILYKPFHLPMLRDVLRTYLLA*
Ga0126379_101507421	3300010366	Tropical Forest Soil	DEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126381_1007953122	3300010376	Tropical Forest Soil	MYGDEVTARLKKTISTRNIPVIINSGWATACNVEERIHPALSAGAEEILYKPVQLPILRDILRSYLFA*
Ga0136847_128283921	3300010391	Freshwater Sediment	VTARLKTNRATRNIPVVINTAWTTACNVEERVDRALNAGAAEILYKPLQFPMLRDVLRAYLMA*
Ga0126383_102873081	3300010398	Tropical Forest Soil	RIKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA
Ga0126383_108725951	3300010398	Tropical Forest Soil	NGDEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126383_111443391	3300010398	Tropical Forest Soil	ATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHTTMLRDVLRTYLLA*
Ga0134122_109320011	3300010400	Terrestrial Soil	TKRLKSNLSTRNIPVVINTGWTTTCNVEERADRALLAGAAEILYKPFYLPILRDVLRTYLFV*
Ga0134122_114584692	3300010400	Terrestrial Soil	DEVTKRLKTNMSTRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA*
Ga0137464_10791042	3300011434	Soil	SNSATRNIPVVINTGWTTSCNVEDSIHRALNAGAAEILYKPIQMPELRGVLRNYLLAC*
Ga0137453_10601202	3300012034	Soil	ATRNIPVVINTGWTTACNVEERVNRALIAGAAEILYKPLQFPMLRDVLRTYLLA*
Ga0137431_10801292	3300012038	Soil	GMGGDEATKRLKANLSTRNIPVVINTPWTTAWNVADRVDRALMAGAEEILYRPFHATMLRQVLRAYLPTCYE*
Ga0137344_10909521	3300012159	Soil	IPVVINTAWTTSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLG*
Ga0137327_10540902	3300012173	Soil	LNGDEVTVRLKSNRSTQNIPVVINTGWTTTCNIEARVERARIAGAAEVLYKPLQFPMVRNILRSYLMV*
Ga0137365_111844011	3300012201	Vadose Zone Soil	PVFLNSGWTTDCNVEERANRALNAGAAEILYKPFQLPMLRDVLRSHLLSA*
Ga0137387_111057141	3300012349	Vadose Zone Soil	GDEATARLKRNMSTRNIPVVINTGWTTACNVEERADRALNAGAAEILYRPFYFPMLRDVLRSYLLA*
Ga0137368_108924742	3300012358	Vadose Zone Soil	STRNIPVIISTAWTTACNVGDRADRALEAGAAEILYKPFHVTMLRDVLRTYLLA*
Ga0137373_105500482	3300012532	Vadose Zone Soil	ARLKRNLSTRKIPVIISTAWTTACNVGDRANRALDAGAEEILYKPFHLTMLRDVLRTYLLA*
Ga0137394_113740271	3300012922	Vadose Zone Soil	NGDEATVRLKRNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0153915_106596922	3300012931	Freshwater Wetlands	TRSIPVVINTGWTTACNVEERINRALNAGAEEVLYKPYQPPMLRNILRTYLMA*
Ga0126375_109030232	3300012948	Tropical Forest Soil	KKNLSTRNIPVVISTAWTTACNVGDRVDRALKAGAEEILYKPFHSTMLRDVLRTYLLA*
Ga0126375_114604271	3300012948	Tropical Forest Soil	MNGDEATARLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHTTMLRDVLRTYLLA*
Ga0126369_134625101	3300012971	Tropical Forest Soil	RLKKNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA
Ga0075347_10244431	3300014313	Natural And Restored Wetlands	LNGDEVTVRLKSNRSTRNIPVVINTGWTTACNIEARVERARIAGAAEVLYKPLQFPMVRSILRSYLMA*
Ga0075342_12481091	3300014320	Natural And Restored Wetlands	NIPVVINTPWTTAWNVADRVDRALIAGAEEILYRPFNATMLRQVLRTYLPVCY*
Ga0180061_10222731	3300014861	Soil	KRLKANLSTRNIPVVINTPWTTAWNVADRVDRALMAGAEEILYRPFHATMLRQVLRAYLPTCYE*
Ga0180074_10641291	3300014877	Soil	RLKSNRATRNIPVVINTGWTTACNVEDRIDRARNAGAAEMIYKPLQLPMLRDDLRT*
Ga0132256_1010970711	3300015372	Arabidopsis Rhizosphere	GLNGDEATVQLKRNTSTRNIPVVLNSGWTTDCNVEERANRALNAGAAEILYKPFQLPMLRDVLRTHLLAS*
Ga0132257_1004151023	3300015373	Arabidopsis Rhizosphere	TVQLKRNTSTRHIPVVLNSGWTTDCNVEERANRALNAGAAEILYKPFQLPMLRDVLRTHLLAA*
Ga0182041_111314572	3300016294	Soil	RLKRNLSTRNIPVVISTAWTTACNIGDRVDRALTAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0182033_101091242	3300016319	Soil	GDEATAQLKRNLSTRNIPVVISTGWTTACNVGDRVDRAIEAGAEEILYKPFHLTMLRDVLRSYLLG
Ga0182033_118508681	3300016319	Soil	NGDEATVRLKRNLSTRNIPVIISTAWTTACNVGDRVDRALEAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0182032_106614051	3300016357	Soil	ATAQLKRNLSTRNIPVVISTGWTTACNVGDRVDRALEAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0187776_103516723	3300017966	Tropical Peatland	RSTSTRNIPVILNTGWTTACNVEEKINRALNAGADEILYRPLQFPTLRNVLRAYLFA
Ga0184620_101347652	3300018051	Groundwater Sediment	IPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA
Ga0184637_105017502	3300018063	Groundwater Sediment	STRNIPVVINTGWSTDCNVEERVNRALNAGAAEVLYKPFQLVMLRDVLRTHLLA
Ga0187773_102295841	3300018064	Tropical Peatland	PGMNGDEAAVRLKRNLSTRNIPVIISTAWTTACNIGDRVDRALAAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0187773_104074241	3300018064	Tropical Peatland	RNIPVILNTGWTTACNVEEKINRALNAGADEILYRPLQFPMLRNVLRAYLFA
Ga0184636_13221861	3300018068	Groundwater Sediment	EVTARLKANTSTRNIPVVINTGWTTAYNVEERISRALNAGAAEILYKPFQLAMLRDVLRTYLLA
Ga0184635_100021051	3300018072	Groundwater Sediment	TRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLLA
Ga0184635_101491931	3300018072	Groundwater Sediment	PVVINTSWTTTCNVGDRATRALDAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0184624_103829761	3300018073	Groundwater Sediment	NGDEATARLKRNASTRHIPVVINTSWTTTCNVEDRANRALDAGAEEILYKPFHLPMLRDVLRTYLFA
Ga0184612_101979951	3300018078	Groundwater Sediment	LKTNRFTRNIPVVINTGWTTACNVEERVNRALNAGAAEVLYKPLQFPMLRDVLRTYLLA
Ga0184628_101735552	3300018083	Groundwater Sediment	TRNIPVVINTGWTTACNIEERVDRALNAGAAEILYRPLQFPMLRDVLRTYLSN
Ga0184629_101122193	3300018084	Groundwater Sediment	RNIPVVINTGWTTTCNVEERVNRALNAGAAEILYKPFQMPILRDVLRTYLLA
Ga0066655_102226431	3300018431	Grasslands Soil	VTAQLKKNMSTRNIPVVINTSWTTDCNVEKRVDRALNAGAAEVLYKPFQLAVLRDVLRNHLLA
Ga0066662_118677911	3300018468	Grasslands Soil	AQLKKNMSTRNIPVVINTSWTTDCNVEKRVDRALNAGAAEVLYKPFQLAVLRDVLRNHLL
Ga0163150_103462611	3300020195	Freshwater Microbial Mat	PVVINTGWTTACNIEDRIDRARNAGAAEILYKPLQFPMVRDVLRTYLMV
Ga0210379_103273871	3300021081	Groundwater Sediment	GMNGDEATARLKRNVSTRHIPVVINTSWTTACNVGDRANRALEAGAEEILYKPFHLTMLRDVLRAYLLA
Ga0210377_102064932	3300021090	Groundwater Sediment	IPVVINTGWTTACNVEERADRALNAGAAEILYKPFYLPMLRDVLRSYLLG
Ga0126371_129401651	3300021560	Tropical Forest Soil	GDEATARLKRNASTRNIPVVINTAWSMSCNVGDRADRALDAGAEEILYKPFHLTTLRDVLRTYLLT
Ga0207663_114748552	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	STRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA
Ga0207701_115308011	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VQLKRNTSTRNIPVVLNSGWTTDCNVEERANRALNAGAVEILYKPFQLPMLRDVLRSHLLSA
Ga0210116_10682161	3300025959	Natural And Restored Wetlands	VRLKSNRSTRNIPVVINTGWTTACNIEARVERACIAGAAEVLYKPLQFPMVRSILRSYLM
Ga0207668_102393481	3300025972	Switchgrass Rhizosphere	KRNMSTRNIPVVLNSGWTTDCNVEERANRALNAGAVEILYKPFQLPMLRDVLRSHLLSA
Ga0208420_10184291	3300026028	Natural And Restored Wetlands	DEATARLKANRSTRNIPVVINTGWTTACNVEERVNRALLAGAAEVLYKPFYPPMVRDVLRTYLFA
Ga0209896_10152471	3300027006	Groundwater Sand	TVRLKRNASTRHIPVVISTAWTTACNVGDRADRALDAGAAEILYKPFHLPMLRDVLRTYLLA
Ga0209998_100514911	3300027717	Arabidopsis Thaliana Rhizosphere	GDEATAKLKAKVSTRNIPILINTGWTTACNIEERANRALLAGAAEILYKPFHLSMLRDVLRSYLF
Ga0207428_107185872	3300027907	Populus Rhizosphere	GDEVTVQLKRNISTRNIPLVLNSGWTTDCNVEERANRALNAGAAEILYRPFQLPLLRDVLRSHLLAA
Ga0247663_10163741	3300028145	Soil	IPVVIDSGWTTACNVEERISRALNAGAAEVLYKPFQFPMLRDVLRTYLMA
Ga0310888_108281092	3300031538	Soil	TVRLKSNRSTRNIPVVINTGWTTACNIEARVERACNAGAAEVLYKPLQFPMVRNVLRSYLMA
Ga0310813_113772712	3300031716	Soil	STRNIPVFINTGWTTACNIEARVERARIAGADEVLYKPLQFAMVRNILRSYLMA
Ga0307469_101290401	3300031720	Hardwood Forest Soil	STRHIPVVINTSWTTTCNVEDRANRALDAGAEEILYKPFHLPILRDVLRTYLFA
Ga0307468_1000710843	3300031740	Hardwood Forest Soil	MDVRLAGMNGDEVTARLKKNMSTRNIPVVINTGWTMDCNVEERISRALNAGAVEV
Ga0307473_100354981	3300031820	Hardwood Forest Soil	MNGDEATVRLKRNLSTRNIPVLISTAWTTACNVGDRVDRALEAGAEEILYKPFHSTMLRDVLRTYLLA
Ga0310917_108044231	3300031833	Soil	MYGDEVTARLKKTISTRNIPVIINSGWTTACNVEERIHRALNAGAEEILYKPVQHPILR
Ga0306926_116382761	3300031954	Soil	PEFYGDELTIRLKKNIATRNIPVIINAGWTTDCHVEERIDRALNAGAAEVLYRPFQLPILRGVLRSHLLV
Ga0315910_112550652	3300032144	Soil	KNLLTRHIPVVINSGWTTACNVEERIDRALNAGASEVLYKPIQFPMLRAVMRTYLFA
Ga0306920_1044744211	3300032261	Soil	IPVIISTAWTTACNVGDRVDRALEAGAEEILYKPFHLTMLRDVLRTYLLA
Ga0316619_121316462	3300033414	Soil	PVVINTGWTTACNIEARVERARIAGAAEVLYKPLQFPMVRNILRSYLMV
Ga0364942_0004496_3944_4150	3300034165	Sediment	MSGDEVTVRLKANTSTRNIPVVINTGWTTAYNVEERISRALNAGAAEILYKPFQLAMLRDVLRTYLLA
Ga0364931_0226868_8_175	3300034176	Sediment	MSTRNIPVVINTGWTMDCNVEERISRALNAGAVEVLYKPFQLPMLRDVLRTYLFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences