Metagenome Family F062011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062011
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	44 residues
Representative Sequence	VATPAPASTAEAMDMVLTGLSYLAAADPTALAAQAQAECLQG
Number of Associated Samples	92
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.13 %
% of genes near scaffold ends (potentially truncated)	84.73 %
% of genes from short scaffolds (< 2000 bps)	76.34 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.908 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.511 % of family members)
Environment Ontology (ENVO)	Unclassified (32.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.71% β-sheet: 0.00% Coil/Unstructured: 54.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF08327	AHSA1	4.58
PF00106	adh_short	2.29
PF00561	Abhydrolase_1	2.29
PF04229	GrpB	2.29
PF00441	Acyl-CoA_dh_1	2.29
PF03793	PASTA	1.53
PF12697	Abhydrolase_6	1.53
PF01965	DJ-1_PfpI	1.53
PF02656	DUF202	1.53
PF13460	NAD_binding_10	1.53
PF00270	DEAD	1.53
PF02754	CCG	1.53
PF00196	GerE	1.53
PF00478	IMPDH	1.53
PF00144	Beta-lactamase	1.53
PF00501	AMP-binding	1.53
PF12724	Flavodoxin_5	0.76
PF00150	Cellulase	0.76
PF00285	Citrate_synt	0.76
PF01904	DUF72	0.76
PF13560	HTH_31	0.76
PF03070	TENA_THI-4	0.76
PF13424	TPR_12	0.76
PF13649	Methyltransf_25	0.76
PF01872	RibD_C	0.76
PF12840	HTH_20	0.76
PF01070	FMN_dh	0.76
PF12867	DinB_2	0.76
PF01370	Epimerase	0.76
PF01814	Hemerythrin	0.76
PF02770	Acyl-CoA_dh_M	0.76
PF01883	FeS_assembly_P	0.76
PF12146	Hydrolase_4	0.76
PF03176	MMPL	0.76
PF00111	Fer2	0.76
PF00970	FAD_binding_6	0.76
PF08818	DUF1801	0.76
PF02771	Acyl-CoA_dh_N	0.76
PF01636	APH	0.76
PF13845	Septum_form	0.76
PF03576	Peptidase_S58	0.76
PF00583	Acetyltransf_1	0.76
PF13561	adh_short_C2	0.76
PF02627	CMD	0.76
PF13191	AAA_16	0.76
PF00072	Response_reg	0.76
PF04149	DUF397	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	3.82
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	2.29
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	1.53
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.53
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.53
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	1.53
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	1.53
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.53
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.53
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.76
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.76
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.76
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.76
COG0372	Citrate synthase	Energy production and conversion [C]	0.76
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.76
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.76
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.76
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.76
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.76
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.91 %
Unclassified	root	N/A	48.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.91 %
Unclassified	root	N/A	48.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.91 %
Unclassified	root	N/A	48.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.34 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.34 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.76 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.76 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.76 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.34 %
Streptosporangium sandarakinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium sandarakinum	0.76 %
Streptomyces bingchenggensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces bingchenggensis	0.76 %
Tetrasphaera japonica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica	0.76 %
Actinomadura macra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macra	0.76 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.76 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.09 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.34 %
Tetrasphaera japonica T1-X7	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	0.76 %
Streptomyces bingchenggensis BCW-1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces bingchenggensis → Streptomyces bingchenggensis BCW-1	0.76 %
Streptosporangium sandarakinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium sandarakinum	0.76 %
Actinomadura macra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macra	0.76 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.76 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100117334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2504	Open in IMG/M
3300002245\|JGIcombinedJ26739_100555772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1025	Open in IMG/M
3300003219\|JGI26341J46601_10144289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300005435\|Ga0070714_101699083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces bingchenggensis → Streptomyces bingchenggensis BCW-1	616	Open in IMG/M
3300005437\|Ga0070710_10264973	Not Available	1109	Open in IMG/M
3300005533\|Ga0070734_10268274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	978	Open in IMG/M
3300009520\|Ga0116214_1000620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14223	Open in IMG/M
3300010376\|Ga0126381_101043305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1180	Open in IMG/M
3300010379\|Ga0136449_100672556	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300010379\|Ga0136449_104191162	Not Available	535	Open in IMG/M
3300017821\|Ga0187812_1089555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	1010	Open in IMG/M
3300017822\|Ga0187802_10094447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1122	Open in IMG/M
3300017822\|Ga0187802_10258506	Not Available	675	Open in IMG/M
3300017924\|Ga0187820_1038221	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1267	Open in IMG/M
3300017924\|Ga0187820_1288624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300017928\|Ga0187806_1051962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1248	Open in IMG/M
3300017928\|Ga0187806_1062131	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300017928\|Ga0187806_1077606	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300017928\|Ga0187806_1260733	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300017928\|Ga0187806_1274153	Not Available	589	Open in IMG/M
3300017932\|Ga0187814_10002476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7320	Open in IMG/M
3300017933\|Ga0187801_10442912	Not Available	544	Open in IMG/M
3300017942\|Ga0187808_10044834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1861	Open in IMG/M
3300017942\|Ga0187808_10116843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300017942\|Ga0187808_10317339	Not Available	704	Open in IMG/M
3300017942\|Ga0187808_10436289	Not Available	602	Open in IMG/M
3300017942\|Ga0187808_10545184	Not Available	539	Open in IMG/M
3300017955\|Ga0187817_10970964	Not Available	544	Open in IMG/M
3300017961\|Ga0187778_10023195	All Organisms → cellular organisms → Bacteria	3797	Open in IMG/M
3300017972\|Ga0187781_10350506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300017972\|Ga0187781_10388268	Not Available	996	Open in IMG/M
3300017973\|Ga0187780_11057660	Not Available	592	Open in IMG/M
3300017974\|Ga0187777_10894365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	638	Open in IMG/M
3300017975\|Ga0187782_10258577	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300017995\|Ga0187816_10020590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2586	Open in IMG/M
3300017995\|Ga0187816_10240747	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300017995\|Ga0187816_10456791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300018001\|Ga0187815_10416822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300018007\|Ga0187805_10213194	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300018007\|Ga0187805_10514662	Not Available	561	Open in IMG/M
3300018012\|Ga0187810_10494937	Not Available	522	Open in IMG/M
3300018012\|Ga0187810_10533066	Not Available	503	Open in IMG/M
3300020580\|Ga0210403_10948737	Not Available	676	Open in IMG/M
3300020581\|Ga0210399_10218783	Not Available	1586	Open in IMG/M
3300021088\|Ga0210404_10639227	Not Available	606	Open in IMG/M
3300021180\|Ga0210396_10146801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2119	Open in IMG/M
3300021180\|Ga0210396_10256906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1552	Open in IMG/M
3300021180\|Ga0210396_11107178	Not Available	666	Open in IMG/M
3300021180\|Ga0210396_11173905	Not Available	643	Open in IMG/M
3300021180\|Ga0210396_11305910	Not Available	603	Open in IMG/M
3300021403\|Ga0210397_10366903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1070	Open in IMG/M
3300021403\|Ga0210397_10499504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300021405\|Ga0210387_10086448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2598	Open in IMG/M
3300021405\|Ga0210387_10148425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2004	Open in IMG/M
3300021405\|Ga0210387_11189983	Not Available	662	Open in IMG/M
3300021406\|Ga0210386_10498336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300021406\|Ga0210386_11662794	Not Available	528	Open in IMG/M
3300021407\|Ga0210383_10879025	Not Available	764	Open in IMG/M
3300021420\|Ga0210394_11025900	Not Available	714	Open in IMG/M
3300021474\|Ga0210390_10152817	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300022557\|Ga0212123_10240732	Not Available	1306	Open in IMG/M
3300022557\|Ga0212123_10460773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium sandarakinum	835	Open in IMG/M
3300026999\|Ga0207949_1027868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300027076\|Ga0208860_1010807	Not Available	851	Open in IMG/M
3300027096\|Ga0208099_1062050	Not Available	528	Open in IMG/M
3300027172\|Ga0208098_1025332	Not Available	600	Open in IMG/M
3300027497\|Ga0208199_1000271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21605	Open in IMG/M
3300027568\|Ga0208042_1005890	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300027604\|Ga0208324_1000175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34348	Open in IMG/M
3300027610\|Ga0209528_1132769	Not Available	547	Open in IMG/M
3300027853\|Ga0209274_10004008	Not Available	6934	Open in IMG/M
3300027855\|Ga0209693_10163456	Not Available	1099	Open in IMG/M
3300027857\|Ga0209166_10182364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1135	Open in IMG/M
3300031543\|Ga0318516_10232383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300031543\|Ga0318516_10807483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300031544\|Ga0318534_10067685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2018	Open in IMG/M
3300031544\|Ga0318534_10146308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1363	Open in IMG/M
3300031561\|Ga0318528_10567030	Not Available	609	Open in IMG/M
3300031564\|Ga0318573_10593825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura macra	596	Open in IMG/M
3300031640\|Ga0318555_10176425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1148	Open in IMG/M
3300031668\|Ga0318542_10419354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300031724\|Ga0318500_10113280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1246	Open in IMG/M
3300031724\|Ga0318500_10647344	Not Available	537	Open in IMG/M
3300031736\|Ga0318501_10130810	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300031736\|Ga0318501_10140422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1237	Open in IMG/M
3300031748\|Ga0318492_10334946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	791	Open in IMG/M
3300031764\|Ga0318535_10134699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1097	Open in IMG/M
3300031770\|Ga0318521_10302885	Not Available	941	Open in IMG/M
3300031771\|Ga0318546_10627671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	756	Open in IMG/M
3300031778\|Ga0318498_10230789	Not Available	836	Open in IMG/M
3300031779\|Ga0318566_10645596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300031781\|Ga0318547_10463150	Not Available	781	Open in IMG/M
3300031782\|Ga0318552_10296396	Not Available	822	Open in IMG/M
3300031796\|Ga0318576_10393243	Not Available	655	Open in IMG/M
3300031805\|Ga0318497_10065490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300031819\|Ga0318568_10793451	Not Available	587	Open in IMG/M
3300031819\|Ga0318568_10845337	Not Available	567	Open in IMG/M
3300031890\|Ga0306925_11312649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300031893\|Ga0318536_10027548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2637	Open in IMG/M
3300031896\|Ga0318551_10229096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034	Open in IMG/M
3300031896\|Ga0318551_10268174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300031962\|Ga0307479_10923108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300032059\|Ga0318533_10030495	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300032063\|Ga0318504_10562035	Not Available	547	Open in IMG/M
3300032063\|Ga0318504_10615355	Not Available	522	Open in IMG/M
3300032065\|Ga0318513_10267894	Not Available	828	Open in IMG/M
3300032068\|Ga0318553_10290220	Not Available	855	Open in IMG/M
3300032068\|Ga0318553_10750445	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032076\|Ga0306924_12399247	Not Available	532	Open in IMG/M
3300032090\|Ga0318518_10108987	Not Available	1388	Open in IMG/M
3300032090\|Ga0318518_10616945	Not Available	553	Open in IMG/M
3300032261\|Ga0306920_101666633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300032805\|Ga0335078_11533155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300032895\|Ga0335074_10522429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300033290\|Ga0318519_10099610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.57%
Aquatic	Environmental → Aquatic	24.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.05%
Freshwater	Environmental → Aquatic → Freshwater	22.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.53%
Peat	Environmental → Terrestrial → Peat	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.90%
Loam	Environmental → Terrestrial → Soil → Loam	9.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	22.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.51%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	22.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.34%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.29%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001173341	3300002245	Forest Soil	MVQVTTIPAPASEAEALEMVLTGLSRLAAADPTAMAA
JGIcombinedJ26739_1005557723	3300002245	Forest Soil	MVQVSTIPAPASEAEALEMVLTGLSRLAAADPTAMAAQAQAECLLALEQGDAMS
JGI26341J46601_101442892	3300003219	Bog Forest Soil	VATPAPASTAEAMDMVLTGLRYMAAADLTALTTLTAQAQAECLQTL
Ga0070714_1016990832	3300005435	Agricultural Soil	MGSDTPPASTAEAMDMVLAGLSYLASADPTALASQAQADCLRAFEQ
Ga0070710_102649732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGDDSPATAAEAMDMVLAGLTYLASADPTALAVQAQADCLRAF
Ga0070734_102682741	3300005533	Surface Soil	VPTIPVPGSAAEAAARVLSGLRFLATTDPAALAAQVQAECLQAFEQA
Ga0070765_1002043821	3300006176	Soil	MAQVSTVPAPASDAEAVRMFLTALRYMAAADPTAMAAQAQAECLLALEQGDAM
Ga0116214_100062014	3300009520	Peatlands Soil	VGIPAPASTAEAVDMVLAGLSYLAAADPTALAARAQAECLQTLEQA
Ga0126381_1010433054	3300010376	Tropical Forest Soil	MATPAPASTAEAKDMVLTGLGYLAAADPTALAVQAQA
Ga0136449_1006725561	3300010379	Peatlands Soil	VATPATPATPASTAEAMDMVLTGLSYLAAADPTALTAQAQADCLQT
Ga0136449_1041911622	3300010379	Peatlands Soil	MAAPASTREALDMVLDGLSYLAAADPTALAAQAQAECLQT
Ga0182036_105275301	3300016270	Soil	VSTVPAPASAAEAMDMVLDGLGYLAAMDPTALAAEAQAQCLRALEQGDSISTAARA
Ga0187812_10895553	3300017821	Freshwater Sediment	VSTVPAPASTAEAMDMVRAGLAYLAAADPTVLAAQAQAEC
Ga0187802_100944471	3300017822	Freshwater Sediment	VATPAPASTAEAMDMVLAGLSYLAAADPTALTAQAQ
Ga0187802_102585061	3300017822	Freshwater Sediment	VSTVPAPASAAEAMDMVLAGLRYMAVADPTDLAAQAQAECLQ
Ga0187820_10382212	3300017924	Freshwater Sediment	VSIPVPASIAEAMDMVLTGLSHLAATDPTALAAQAQAECLQGLEQADAIST
Ga0187820_12886241	3300017924	Freshwater Sediment	VATPASAKEALEMVLDGLRYLAVTDPTTLASQAQAECLQTLEQ
Ga0187807_12343641	3300017926	Freshwater Sediment	MSVPAPASTREALEMVLGGLGYLATMDPTALAGSAQAEILQALEQGNAISTAARARILAA
Ga0187806_10519622	3300017928	Freshwater Sediment	VATPASTRQALDMVLTGLSYLAAADPTALTAQAQAE
Ga0187806_10621311	3300017928	Freshwater Sediment	VSIPVPASTAEAMDMVLTGLSHLAAADPTALAAQAQAE
Ga0187806_10776061	3300017928	Freshwater Sediment	MATPASTQQAMDMVLAGLSYLAAADPTALTAQAQAECLQT
Ga0187806_12607331	3300017928	Freshwater Sediment	MATPASTRQALQMVLDGLAYLAAADPTALAAQAQAECLQTLEQ
Ga0187806_12741531	3300017928	Freshwater Sediment	VATPAPASTAEALDMVLTGLSYLAAADPTALTAQAQAEC
Ga0187814_100024761	3300017932	Freshwater Sediment	VDIPAPANTAEAVDMVLTGLSYLAAADPTALAAQAQAECLQAFEQADG
Ga0187801_100295621	3300017933	Freshwater Sediment	VSIPVPASIAEAMDMVLTGLSHLAATDPTALAAQAQAECLQGLEQADAISTAARAWFLG
Ga0187801_104429121	3300017933	Freshwater Sediment	MATPASTKEALEMVLDGLGYLAAADPTALAAEAQADCLQVLEQA
Ga0187808_100448344	3300017942	Freshwater Sediment	VSIPVPASIAEAMDMVLTGLSHLAATDPTALAAQAQ
Ga0187808_101168431	3300017942	Freshwater Sediment	VATPAPASTAEAMDMVLTGLRYMAAADPTALAAEA
Ga0187808_101778521	3300017942	Freshwater Sediment	VSVPTPVNAAEAMDMVLTGLGYLAAADPTAFAAEAQAQCLQTLEQADAVSTAVRAWFLGAFTNG
Ga0187808_103173391	3300017942	Freshwater Sediment	VSTVPAPASAAEAMDMVLAGLRYMAVADPTDLAAQAQAECLQF
Ga0187808_104362892	3300017942	Freshwater Sediment	MSVPAPASTAEAIDMVLTGLSHLAATDPTALAAQAQAECL
Ga0187808_105451841	3300017942	Freshwater Sediment	VAVPVPASTAEALEMVLTGLGYLAAADPTALAARAQAE
Ga0187817_109709642	3300017955	Freshwater Sediment	MATPASTQEALEMVPDGLSYLAAADPTALAAQAQAECLQTLE
Ga0187778_100231951	3300017961	Tropical Peatland	VATPASTQEALDMVLDGLRYLAAADPAALAAQAQAECLHVLEQA
Ga0187778_103708791	3300017961	Tropical Peatland	VAIPDPASTVEAMDMVLAGLRYMTAADPTAMAGQAQAECLQTLEQADAMSAAVRAWFLAAFTSAQ
Ga0187781_103505061	3300017972	Tropical Peatland	VSTVPDPASTAQAIDMVLTGLRHMAVTDPAAMSAQAQAECLL
Ga0187781_103882682	3300017972	Tropical Peatland	VATPASTQEALEMVLDGLSYLAAADPTALAVRAQAECLQGLEQAD
Ga0187780_110576602	3300017973	Tropical Peatland	VGIPAPADTAEAMEMVLTGLSHLAAADPTVLAARA
Ga0187777_108943652	3300017974	Tropical Peatland	VSIPAPASTAEAMDMVLTGLSHLATTDPTALAARAQAECLHGLEQADATPPPPGPAS
Ga0187782_102585773	3300017975	Tropical Peatland	MSVPAPANAAEAMDMVLTGLGFMAAADPTAFAAEAQAQALQALEQAD
Ga0187816_100205901	3300017995	Freshwater Sediment	MATPASTRQALDMVLAGLSYLAAADPTALTAQAQAECLQTLE
Ga0187816_102407472	3300017995	Freshwater Sediment	VSIPVPASTAEAMDMVLTGLSHLAAADPTALAAQAQA
Ga0187816_104567912	3300017995	Freshwater Sediment	VSIPAPASTAEALDMVLTGLSYLAAADPTALAAQAQAECLQTL
Ga0187815_104168221	3300018001	Freshwater Sediment	MATPASTQEALEMVLDGLSYLAAADPTALAAQAQAECLQ
Ga0187805_102131943	3300018007	Freshwater Sediment	MATPASTRQALDMVLTGLGYLAAADPTALTAQAQAECLQTLEQ
Ga0187805_105146622	3300018007	Freshwater Sediment	VSIPVPASIAEAMDMVLTGLSHLAATDPTALAAQAQAECLQGLEQAD
Ga0187810_104949371	3300018012	Freshwater Sediment	MATPASTKEALEMVLDGLGYLAAADPTALAAEAQADCLQV
Ga0187810_105330661	3300018012	Freshwater Sediment	VSVPAPANAAEAMDMVLTGLGYLAAADPTAFAAEAQAQCLQTLEQ
Ga0210403_109487372	3300020580	Soil	VSTVPAPASTADAIKMVLTGLSHLAAADPAAMAAQAQAECLLAL
Ga0210399_102187832	3300020581	Soil	VVTPAPANAAEAMDMVLTGLGYLAAADPTAFAAQAQAECLLAL
Ga0210401_100694671	3300020583	Soil	VSTIPAPASDAEAVAMVLTGLRHLAAADPAVMAVQAQAECLLALEQGDAMSA
Ga0210404_106392272	3300021088	Soil	VQTLPDPASAAEAMDQILSRLRYLAATDPTALAAQAQ
Ga0210396_101468015	3300021180	Soil	VQTLPDPASAAEAMDQILSRLRYLAAADPTALAAQAQ
Ga0210396_102569061	3300021180	Soil	VSTVPTPASTTDAIKMVLTGLSHLAATDPTAMAAQ
Ga0210396_111071781	3300021180	Soil	VSIPVPASDVEAMDMYRTGLSYLAATDPTAMAAQTQAEFLQAF
Ga0210396_111739051	3300021180	Soil	VSIVPAPASTADAIKMVLTGLSHLAATDPTAMAAQAQAECLQA
Ga0210396_113059101	3300021180	Soil	VQTLPDPASAAEAMDQILSRLRYLAAADPTALAAQ
Ga0210397_103669031	3300021403	Soil	VNIPAPASTADAAEMILAGLRYLAAADPTALAAQAQ
Ga0210397_104995041	3300021403	Soil	VGIPDPTSTAEAMDMVMTGLRYMTATDPTTLAGRAQAECLQTLEQSDA
Ga0210387_100864481	3300021405	Soil	VSTVPAPASTADAIKMVLTGLSHLAATDPTAMAAQAQAEC
Ga0210387_101484251	3300021405	Soil	VQTLPDPASAAEAMDQILSRLRYLAATDPTALAAQ
Ga0210387_111899831	3300021405	Soil	VSVPAPASTAEAADMVLTGLRYLAAADPTTLAAQAQAECLQSLEQADA
Ga0210386_104983363	3300021406	Soil	MAQVSTVPAPASDAEAVEMFLTALRHMAAADPTAMAAQAQAECL
Ga0210386_116627941	3300021406	Soil	VQTLPDPASAAEAMDQVLSGLRYLAAADPTAMAAQAQ
Ga0210383_108790251	3300021407	Soil	VQTLPDPASAAEAMDQILSRLRYLAATDPTALAAQAQAEC
Ga0210394_110259002	3300021420	Soil	VQTLPDPASAAEAMDQILSRLRYLAATDPTAMAAQA
Ga0210390_101528171	3300021474	Soil	VQTLPDPASAAEAMDQVLSGLRYLAATDPTAMAAQAQAECLQGFEQAGA
Ga0212123_102407321	3300022557	Iron-Sulfur Acid Spring	MAQVSTIPAPASEAEALEMVLTGLSRLAAADPTAMAAQAQAECLLALEQ
Ga0212123_104607731	3300022557	Iron-Sulfur Acid Spring	MSTIAAPASTAEAVDMYLTSLRYLAATDPTVMAAQAQAECLRALEQ
Ga0209648_104108332	3300026551	Grasslands Soil	VTIPAPASAAEAMDMVRTGLSYLAAVDPTAMAVQAQAECLQALEQSDAILVAARAR
Ga0209648_107028131	3300026551	Grasslands Soil	VAIPAPASNAEAMDMVLTGLRHLAATDPTALASQAQAEYLQSLEHADAISTAVRAWFL
Ga0207949_10278681	3300026999	Forest Soil	VSTIPAPASTAEAIAMVVTGLRHLAVTDPTGMAAQAQ
Ga0208860_10108071	3300027076	Forest Soil	VGVPAPANTAEAVDMVLAGLRYLAAADPTAMAAQAQAECLRSLEQADAVAT
Ga0208099_10620502	3300027096	Forest Soil	VRNPVQTLPDPASAAEAMDQILSRLRYLAATDPTALAAQAQAECLQGFEQADA
Ga0208098_10253321	3300027172	Forest Soil	VQTLPDPASAAEAIDRVLSGLSYLTAADPTAMAVQTQAECLQGFEQAD
Ga0208199_10002711	3300027497	Peatlands Soil	VSTVPAPASTAEAVDMVLAGLSYLAAADPTALAARAQAECLQTLE
Ga0208042_10058907	3300027568	Peatlands Soil	VSTVPAPASTAEAVDMVLAGLSYLAAADPTALAARAQAECLQT
Ga0208324_100017534	3300027604	Peatlands Soil	VGIPAPASTAEAVDMVLAGLSYLAAADPTALAARAQAECLQTLEQADA
Ga0209528_11327691	3300027610	Forest Soil	MLPVPASVPEAIDRVLSGLSYLAVTDATAMAAQTRAECL
Ga0209274_100040085	3300027853	Soil	MSIPAPATTAEAMDMVLTGLRHLAAADPTALPAQAQAECLQGLEQADAI
Ga0209693_101634562	3300027855	Soil	VSTVPAPASTADAIKMVLTGLSHLAAADPTAMAAQAQAECL
Ga0209166_101823641	3300027857	Surface Soil	MSTTPASTAEAIDMYLTSLRHLAATDPATLAAQAQA
Ga0311339_107947181	3300029999	Palsa	VSVPVPASTAEAMDMVLTGLKHLAAADPTTLAAQAQADCLHAFEQAGAILTAARAWFLGAFT
Ga0311356_109702461	3300030617	Palsa	VSIPAPASTTEAMDMVLTGLRHLAAADPTTLAAQAQADCLQAFEQADAIATAARAWF
Ga0318516_102323831	3300031543	Soil	MATPAPASTAEAMEMVLAGLGYLAAADPTALAVQAQAECLQAFE
Ga0318516_108074831	3300031543	Soil	VGTPAPASTAEAMDMVLTGLSYMAAADPTALAARAQAECLHAFEQADAIS
Ga0318534_100676854	3300031544	Soil	VNTRAPGSTAEAMSMVLTGLRYMAAADPTALAAQAQ
Ga0318534_101463081	3300031544	Soil	VGIPAPASTAEAMDMVLTGLSYLAAADPAALAARAQAECLQGLE
Ga0318528_105670301	3300031561	Soil	VATPAPASSAEAIDMVLTGLSYLASADPTALAAQAQAECLQGLEQADAMST
Ga0318573_105938253	3300031564	Soil	VSIPAPASAAEAMDMVLAGLSYMAAADPTALAARA
Ga0318555_101764251	3300031640	Soil	VAIPAPASTAEAMDMVLAGLKYMATADPTALAAQAQADCLQAFEQADA
Ga0318542_104193541	3300031668	Soil	MATPASTKEALEMVLDGLGYLAATDPTAMAAAAQAQ
Ga0310686_1134260121	3300031708	Soil	VGIPDPASTTEAMDMVINGLRYMTATDPTALAGQAQAECLLALEQGDAMS
Ga0307474_102243481	3300031718	Hardwood Forest Soil	VSTPAPVSAAEAMDQVLSGLSYLAAIDPTVLPAQVQAECLQGFEQAEAISTAARAWYLS
Ga0318500_101132801	3300031724	Soil	VAIPAPASTAEAMDMVLTGLRHLAATDPTALAAQAQ
Ga0318500_106473441	3300031724	Soil	VATATPANAAEAMDMVLIGLGYLAAADPTALAAQTQA
Ga0318501_101308104	3300031736	Soil	VAIPAPSSTAEAMDLVLTGLSYLAAADPTALASQA
Ga0318501_101404222	3300031736	Soil	VSIPAPASTAEAMDMVLTGLSHLATTDPTALAAPAQ
Ga0318492_103349461	3300031748	Soil	VNTPAPASTAEAMNMVLAGLKYMAAADPTALAAQAQAECLQAFEQAD
Ga0318535_101346993	3300031764	Soil	MATPAPASTAEAMEMVLAGLGYLAAADPTALAVQAQAECL
Ga0318509_100231466	3300031768	Soil	MATPASTKEALEMVLDGLGYLAATDPTAMAAAAQAQCLQALEQGDAISTAARARIL
Ga0318521_103028852	3300031770	Soil	VGIPAPVDTAEAVDMVLTGLSYLAAVDPTVLSARAQAECLHGLLQ
Ga0318546_106276711	3300031771	Soil	VNTPAPASTAEAMNMVLAGLKYMAAADPTALAAQAQAECLQAFEQADAVS
Ga0318498_102307891	3300031778	Soil	VGIPAPASTAEAMDMVLTGLSYLAAADPAALAARAQAEC
Ga0318566_106455961	3300031779	Soil	VATPAPASTAEAMDMVLTGLRHLAATDPTALAAQAQ
Ga0318547_104631502	3300031781	Soil	VAIPDPASTVEAMDMVLAGLRYMIAADPTAMASRAQAECLQTLE
Ga0318552_102963962	3300031782	Soil	VAIPDPASTVEAMDMVLAGLRYMIAADPTAMASRAQAECLQTLEQANAMNAAVRAWLLAA
Ga0318529_103497882	3300031792	Soil	VSTDATPASTSEALRMLRSSLSYLAAVDPTAMAAEAQAECLQALETADAIS
Ga0318576_103932432	3300031796	Soil	VATPAPASTAEAMDMVLTGLSYLAAADPTALAAQAQAECLH
Ga0318497_100654904	3300031805	Soil	VNTRAPGSTAEAMSMVLAGLRYMAAADPTALAAQAQAECLQAFEHADA
Ga0318568_107934511	3300031819	Soil	VATATPANAAEAMDMVLIGLGYLAAADPTALAAQTQAECLQGLEQADAIS
Ga0318568_108453373	3300031819	Soil	VATPAPASSAEAIDMVLTGLSYLASADPTALAAQAQAECLQGLE
Ga0306925_113126492	3300031890	Soil	VSTIPVPASTAEAADMVLAGLRYLAATDPTALAAQA
Ga0318536_100275484	3300031893	Soil	VNTPAPGSTAEAMSMVLTGLRYMAAADPTALAAQAQAECLQAFEHADA
Ga0318551_102290961	3300031896	Soil	VGTPAPASTAEAMDMVLTGLSYMAAADPTALAARAQAECLH
Ga0318551_102681741	3300031896	Soil	VGIPAPASTAEAMDMVLTGLSYLAAADPAALAARAQAECLQG
Ga0306923_121443451	3300031910	Soil	VSIPAPASTAEAMDMVLTGLSHLATTDPTALAAPAQAECLHGLEQADAISTAARAWFLG
Ga0307479_109231081	3300031962	Hardwood Forest Soil	VQTLPDPASAAEAMDQVLSGLRYLAATDPTALAAQAQ
Ga0318533_100304955	3300032059	Soil	VNTPAPASTAEAMNMVLTGLKYMAAADPTALAVRAQ
Ga0318504_105620351	3300032063	Soil	VSTGATPASTSEALRMLRSSLSYLAAVDPTAMAAEAQAECLQALE
Ga0318504_106153551	3300032063	Soil	VNTPAPASTAEAMNMVLTGLKYMAAADPTALAVRAQA
Ga0318513_102678942	3300032065	Soil	VATPAPASTAEAMDMVLTGLSYLAAADPTALAAQAQAECLQG
Ga0318553_102902201	3300032068	Soil	MGYAPASASDAMDMVQAGLSYLAAADPTALPAETQ
Ga0318553_107504452	3300032068	Soil	MATPAPASTAEAMEMVLAGLGYLAAADPTALAVQAQ
Ga0306924_123992471	3300032076	Soil	MATPASTKEALEMVLDGLGYLAATDPTAMAAAAQAQCLQALEQSD
Ga0318518_101089871	3300032090	Soil	VAIPAPGSTAEALDMLRAGMGYLAAADPAALPAQAQAECLAAL
Ga0318518_106169451	3300032090	Soil	VNTPAPASTAEAMDMVLAGLKYMAAADPTALAVRAQAECLQAFEQADA
Ga0306920_1016666331	3300032261	Soil	VATPAPASTAEAMDMVLAGLSYLAVTDPAALAAQAQAECLQAFEQA
Ga0335078_115331554	3300032805	Soil	MAIPAPASTAEAMDMVLTGLSHLAAADVTALAAQAKAKC
Ga0335074_105224291	3300032895	Soil	MSIPAPASAGDAMDMVLTGLAYLTSADPTALAAQAQADCLQGFERAD
Ga0318519_100996102	3300033290	Soil	VGIPAPVDTAEAVDMVLTGLSYLAAVDPTVLSARAQAEWTTVPPLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences