Metagenome / Metatranscriptome Family F061985

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061985
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	45 residues
Representative Sequence	MIIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA
Number of Associated Samples	115
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.79 %
% of genes near scaffold ends (potentially truncated)	79.39 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.672 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.214 % of family members)
Environment Ontology (ENVO)	Unclassified (29.771 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.29% β-sheet: 0.00% Coil/Unstructured: 75.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13189	Cytidylate_kin2	3.82
PF01042	Ribonuc_L-PSP	2.29
PF07883	Cupin_2	2.29
PF12697	Abhydrolase_6	2.29
PF03733	YccF	1.53
PF07690	MFS_1	1.53
PF08327	AHSA1	1.53
PF00903	Glyoxalase	1.53
PF12680	SnoaL_2	1.53
PF08279	HTH_11	0.76
PF03061	4HBT	0.76
PF03631	Virul_fac_BrkB	0.76
PF13427	DUF4111	0.76
PF04828	GFA	0.76
PF07676	PD40	0.76
PF13450	NAD_binding_8	0.76
PF13683	rve_3	0.76
PF01252	Peptidase_A8	0.76
PF06253	MTTB	0.76
PF12840	HTH_20	0.76
PF00857	Isochorismatase	0.76
PF04545	Sigma70_r4	0.76
PF13577	SnoaL_4	0.76
PF07366	SnoaL	0.76
PF00248	Aldo_ket_red	0.76
PF00144	Beta-lactamase	0.76
PF03069	FmdA_AmdA	0.76
PF13377	Peripla_BP_3	0.76
PF10571	UPF0547	0.76
PF02129	Peptidase_S15	0.76
PF01936	NYN	0.76
PF00211	Guanylate_cyc	0.76
PF13385	Laminin_G_3	0.76
PF13302	Acetyltransf_3	0.76
PF00027	cNMP_binding	0.76
PF02163	Peptidase_M50	0.76
PF04075	F420H2_quin_red	0.76
PF03795	YCII	0.76
PF13191	AAA_16	0.76
PF00106	adh_short	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.29
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.53
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.53
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.76
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.76
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.76
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.76
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.67 %
Unclassified	root	N/A	47.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.67 %
Unclassified	root	N/A	47.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.67 %
Unclassified	root	N/A	47.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.46 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.05 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.95 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.05 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	22.90 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.05 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.53 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1.53 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.05 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.53 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1.53 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.05 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.53 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1.53 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.05 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.53 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1.53 %
unclassified Catenulispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.90 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.05 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.53 %
Actinobacteria bacterium 13_2_20CM_2_66_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1.53 %
Catenulispora sp. 13_1_20CM_3_70_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01BNINY	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
2189573004\|GZGWRS401C0S6C	Not Available	528	Open in IMG/M
2199352024\|deeps_contig97391.57375	Not Available	549	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100273235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300000550\|F24TB_10066164	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300000891\|JGI10214J12806_10387618	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300000953\|JGI11615J12901_10265674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300000955\|JGI1027J12803_106869813	Not Available	614	Open in IMG/M
3300000956\|JGI10216J12902_101620730	Not Available	1074	Open in IMG/M
3300004480\|Ga0062592_101570577	Not Available	634	Open in IMG/M
3300005172\|Ga0066683_10313303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300005327\|Ga0070658_11114961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300005329\|Ga0070683_101517123	Not Available	644	Open in IMG/M
3300005332\|Ga0066388_106419075	Not Available	593	Open in IMG/M
3300005337\|Ga0070682_100013906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4641	Open in IMG/M
3300005355\|Ga0070671_100974837	Not Available	742	Open in IMG/M
3300005435\|Ga0070714_100251555	Not Available	1634	Open in IMG/M
3300005455\|Ga0070663_100533905	Not Available	978	Open in IMG/M
3300005457\|Ga0070662_100771751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	816	Open in IMG/M
3300005467\|Ga0070706_100742332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300005471\|Ga0070698_100224524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1811	Open in IMG/M
3300005546\|Ga0070696_101348160	Not Available	607	Open in IMG/M
3300005553\|Ga0066695_10363510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300005561\|Ga0066699_10274529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1195	Open in IMG/M
3300005561\|Ga0066699_10722105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300005564\|Ga0070664_100227685	Not Available	1670	Open in IMG/M
3300005764\|Ga0066903_100018400	All Organisms → cellular organisms → Bacteria	7287	Open in IMG/M
3300005764\|Ga0066903_101315777	Not Available	1351	Open in IMG/M
3300005764\|Ga0066903_104046351	Not Available	786	Open in IMG/M
3300005764\|Ga0066903_105038656	Not Available	700	Open in IMG/M
3300005764\|Ga0066903_105431276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300006178\|Ga0075367_10622032	Not Available	686	Open in IMG/M
3300006791\|Ga0066653_10499006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	616	Open in IMG/M
3300006797\|Ga0066659_11674813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300006806\|Ga0079220_11666614	Not Available	556	Open in IMG/M
3300006852\|Ga0075433_10003255	All Organisms → cellular organisms → Bacteria	12540	Open in IMG/M
3300006854\|Ga0075425_102562497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300006871\|Ga0075434_100632859	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1088	Open in IMG/M
3300006881\|Ga0068865_102171991	Not Available	505	Open in IMG/M
3300006903\|Ga0075426_10277932	Not Available	1222	Open in IMG/M
3300009162\|Ga0075423_10981239	Not Available	897	Open in IMG/M
3300009162\|Ga0075423_12863965	Not Available	528	Open in IMG/M
3300009174\|Ga0105241_12159018	Not Available	551	Open in IMG/M
3300009177\|Ga0105248_13408218	Not Available	505	Open in IMG/M
3300010048\|Ga0126373_12444438	Not Available	582	Open in IMG/M
3300010048\|Ga0126373_13031531	Not Available	524	Open in IMG/M
3300010154\|Ga0127503_11032714	Not Available	585	Open in IMG/M
3300010303\|Ga0134082_10278587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300010366\|Ga0126379_13698407	Not Available	512	Open in IMG/M
3300010371\|Ga0134125_12860639	Not Available	524	Open in IMG/M
3300010396\|Ga0134126_11068058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300010396\|Ga0134126_11806409	Not Available	670	Open in IMG/M
3300010401\|Ga0134121_12384961	Not Available	569	Open in IMG/M
3300011270\|Ga0137391_10125810	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300012004\|Ga0120134_1040097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300012014\|Ga0120159_1090105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300012019\|Ga0120139_1042168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1076	Open in IMG/M
3300012200\|Ga0137382_10408618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300012206\|Ga0137380_10317860	Not Available	1393	Open in IMG/M
3300012206\|Ga0137380_10641198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300012209\|Ga0137379_11248981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300012882\|Ga0157304_1011666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300012930\|Ga0137407_12204850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012951\|Ga0164300_11155254	Not Available	510	Open in IMG/M
3300012960\|Ga0164301_10825017	Not Available	712	Open in IMG/M
3300012961\|Ga0164302_10008861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3839	Open in IMG/M
3300012971\|Ga0126369_13534384	Not Available	512	Open in IMG/M
3300012976\|Ga0134076_10227253	Not Available	790	Open in IMG/M
3300013501\|Ga0120154_1108541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300013765\|Ga0120172_1104668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300014058\|Ga0120149_1213386	Not Available	540	Open in IMG/M
3300014058\|Ga0120149_1230382	Not Available	519	Open in IMG/M
3300014154\|Ga0134075_10175796	Not Available	918	Open in IMG/M
3300014325\|Ga0163163_12033762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300014829\|Ga0120104_1097545	Not Available	587	Open in IMG/M
3300014969\|Ga0157376_11759042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300015054\|Ga0137420_1407012	Not Available	1498	Open in IMG/M
3300015261\|Ga0182006_1099959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1031	Open in IMG/M
3300015373\|Ga0132257_101035533	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1034	Open in IMG/M
3300015374\|Ga0132255_104051325	Not Available	622	Open in IMG/M
3300018054\|Ga0184621_10101112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300018465\|Ga0190269_10044391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2039	Open in IMG/M
3300018482\|Ga0066669_12175412	Not Available	525	Open in IMG/M
3300019888\|Ga0193751_1001861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13152	Open in IMG/M
3300022534\|Ga0224452_1139557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300022915\|Ga0247790_10084128	Not Available	769	Open in IMG/M
3300025885\|Ga0207653_10187520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300025911\|Ga0207654_10262891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300025914\|Ga0207671_11141189	Not Available	611	Open in IMG/M
3300025929\|Ga0207664_10744532	Not Available	881	Open in IMG/M
3300025931\|Ga0207644_11177058	Not Available	644	Open in IMG/M
3300025931\|Ga0207644_11300473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300025939\|Ga0207665_10859549	Not Available	718	Open in IMG/M
3300025945\|Ga0207679_11826621	Not Available	555	Open in IMG/M
3300026067\|Ga0207678_11278298	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026116\|Ga0207674_11277102	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026121\|Ga0207683_10880382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300026142\|Ga0207698_11660960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300026536\|Ga0209058_1048917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2427	Open in IMG/M
3300028379\|Ga0268266_10868286	Not Available	872	Open in IMG/M
3300028707\|Ga0307291_1062066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300028711\|Ga0307293_10025673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1760	Open in IMG/M
3300028799\|Ga0307284_10394129	Not Available	563	Open in IMG/M
3300028811\|Ga0307292_10060786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_66_6	1430	Open in IMG/M
3300028828\|Ga0307312_10033732	Not Available	2997	Open in IMG/M
3300028828\|Ga0307312_10615642	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300028881\|Ga0307277_10019307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2661	Open in IMG/M
3300028884\|Ga0307308_10311275	Not Available	754	Open in IMG/M
3300030336\|Ga0247826_10666028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300031446\|Ga0170820_14048193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300031543\|Ga0318516_10305896	Not Available	919	Open in IMG/M
3300031544\|Ga0318534_10784111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300031546\|Ga0318538_10575509	Not Available	611	Open in IMG/M
3300031572\|Ga0318515_10083189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1661	Open in IMG/M
3300031681\|Ga0318572_10570376	Not Available	674	Open in IMG/M
3300031771\|Ga0318546_11168517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300031781\|Ga0318547_10604847	Not Available	680	Open in IMG/M
3300031781\|Ga0318547_10894374	Not Available	554	Open in IMG/M
3300031912\|Ga0306921_10288205	Not Available	1923	Open in IMG/M
3300031938\|Ga0308175_101393222	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031962\|Ga0307479_11737987	Not Available	577	Open in IMG/M
3300032068\|Ga0318553_10071388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1739	Open in IMG/M
3300032090\|Ga0318518_10193458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1041	Open in IMG/M
3300032090\|Ga0318518_10533491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300032174\|Ga0307470_10910126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300032261\|Ga0306920_100287529	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300032261\|Ga0306920_100457774	Not Available	1896	Open in IMG/M
3300032261\|Ga0306920_102940011	Not Available	645	Open in IMG/M
3300033158\|Ga0335077_10854811	Not Available	921	Open in IMG/M
3300033412\|Ga0310810_10497874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1213	Open in IMG/M
3300033475\|Ga0310811_10519312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1237	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.34%
Host-Associated	Host-Associated	22.90%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.05%
Plants	Host-Associated → Plants	22.90%
Aquatic	Environmental → Aquatic	2.29%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Sediment	Environmental → Aquatic → Sediment	1.53%
Roots	Host-Associated → Plants → Roots	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.07%
Loam	Environmental → Terrestrial → Soil → Loam	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.53%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_03628430	2170459014	Switchgrass, Maize And Mischanthus Litter	LDVDDRRGETNGRSMVSFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
FG2_01169620	2189573004	Grass Soil	FDSEEHARAAGDRVSAIAGARPDDVTLDGVEVREVVASA
deeps_00822100	2199352024	Soil	GQLNGLAMSIFDSEENARAAGDRVSAIAAGAGGDVTLDSVEVREVVASA
INPhiseqgaiiFebDRAFT_1002732351	3300000364	Soil	IIFDSEANARAAGERVSAIAASATDDVTLDGTEVREVVASA*
F24TB_100661642	3300000550	Soil	LNVLAMIIFDSEENARAADDRVSANFSQLEDRDDITLDALEVREVVASA*
JGI10214J12806_103876181	3300000891	Soil	SGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA*
JGI11615J12901_102656742	3300000953	Soil	TWMTGGGETNGLSMIIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
JGI1027J12803_1068698131	3300000955	Soil	TGGAASNGLAMMIFDSEENARAAGERIRAVANARPEDVTLDSVEVREVVASA*
JGI10216J12902_1016207301	3300000956	Soil	EENARAAGDRVSAIAAEAGDDNVTVDSVEVREVVASA*
Ga0062592_1015705771	3300004480	Soil	VFDSEENARTAGDRISAIAASSPDDVTLDGVEVREVVASA*
Ga0066683_103133033	3300005172	Soil	LNGLSMIIFDSEENARAAGDRVSAIAAEASDDVTLDGVEVREVVASA*
Ga0070658_111149611	3300005327	Corn Rhizosphere	LSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA*
Ga0070683_1015171231	3300005329	Corn Rhizosphere	VERRWRVEGLSMIIFDSADNERAAGDRMSAVAANAPDDATLDSVEVREVVASA*
Ga0066388_1064190751	3300005332	Tropical Forest Soil	SEENARAAGDRVSAGFSQLESRDDLTLDGVEVREVVASA*
Ga0070682_1000139063	3300005337	Corn Rhizosphere	MIVFDSADNARAAGDRMSAVAANAPDDVTLDSVEVREVVASA*
Ga0070671_1009748372	3300005355	Switchgrass Rhizosphere	SLVVFDSEENARAAGERVSAIAADAPSDVTLESVEVREVVASA*
Ga0070714_1002515554	3300005435	Agricultural Soil	LSMIIFDSEENARAAGDRVSSIASSRPDDVTLDGVEVREVVASA*
Ga0070663_1005339052	3300005455	Corn Rhizosphere	MIIFDSADNERAAGDRMSAVAANAPDDVTLDSVEVREVVASA*
Ga0070662_1007717511	3300005457	Corn Rhizosphere	NGLSMVIFDSEESARAAGDRVSAIAAAARDDVTLDGVEVREVVASA*
Ga0070706_1007423321	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TGGGETNGLSMIIFDSEENARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0070698_1002245241	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IFDSEENARAAGDRVSAIAAAARDDVTLDGVEVREVVASA*
Ga0070696_1013481601	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LSMIIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0066695_103635101	3300005553	Soil	DSEENARAAGDRVSAIAAEAGGDNVTLDSVEVREVVASA*
Ga0066699_102745291	3300005561	Soil	SEENARAAGERVSAIAAGAPDDVTLDGVEVREVVASA*
Ga0066699_107221051	3300005561	Soil	DGGLNGLSMAIFDSEENARAVGDRVSAIAAAAGGDVTVDGVEVREVVASA*
Ga0070664_1002276853	3300005564	Corn Rhizosphere	MIIFDSADNERAAGDRMSAVAANAPDDATLDSVEVREVVASA*
Ga0066903_1000184002	3300005764	Tropical Forest Soil	MIVFDSEETARSAGDRIRAIAAAAPDDVTLDSVEVREVVASA*
Ga0066903_1013157774	3300005764	Tropical Forest Soil	STGGGPLNGLSMIIFDAEENARAAGDRVSAIAATRPDDVTLDGVEVRKVVASA*
Ga0066903_1040463512	3300005764	Tropical Forest Soil	NGLSMIIFDSEENARAAGDRISAIAAGAPDDVTLDGVEVREVVASA*
Ga0066903_1050386561	3300005764	Tropical Forest Soil	SEENARAAGDRVSAVAASRPDDVTLDGVEVREVVASA*
Ga0066903_1054312762	3300005764	Tropical Forest Soil	GYWTWPTGEGELNALSMIIFDSEENARAAGDRVSANFSQLEDRDDVTLDGVEVREVVASA
Ga0075367_106220321	3300006178	Populus Endosphere	VFDSEENAQAAGERIRTIAAEAPDDVTVEGVEVREVVASA*
Ga0066653_104990061	3300006791	Soil	EENARAAGDRVSAIAADAPDDVTLDSVEVREVVASA*
Ga0066659_116748132	3300006797	Soil	LSMIIFDSEENARAAGERVSAIAAGAPDDVTLDGVEVREVVASA*
Ga0079220_116666143	3300006806	Agricultural Soil	MIIFDSEENARAAGERVKAIAADAPDDVTLDGTEVREVVASA*
Ga0075433_100032557	3300006852	Populus Rhizosphere	VADRRRGLNVLAMIIFDSEENARAAGDRVSANFSQLENRDDITLDGVEVREVVASA*
Ga0075425_1025624971	3300006854	Populus Rhizosphere	LSMIIFDSEENARAAGDRISAIAANAGDDVTLDGTEVREVVASA*
Ga0075434_1006328593	3300006871	Populus Rhizosphere	LNVLAMIIFDSEENARAAGDRVSANFSQLENRDDITLDGVEVREVVASA*
Ga0068865_1021719911	3300006881	Miscanthus Rhizosphere	FDSEENARAAGDRIRAIAADAPDDVTLDGVEVREVVASA*
Ga0075426_102779321	3300006903	Populus Rhizosphere	NARAVGDRVSSIAAEVGPDRVTLDGVEVREVVASA*
Ga0075423_109812392	3300009162	Populus Rhizosphere	SMIIFDSEENARAAGDRVSTVAADAPDDVTLESVEVREVVASA*
Ga0075423_128639652	3300009162	Populus Rhizosphere	IMFDSEENARAAGDRISAIAADAPDDVTLDGVEVREVVASA*
Ga0105241_121590182	3300009174	Corn Rhizosphere	MIVFDSADNARAAGDRMSAVAANVPDDVTLDSVEVREVVASA*
Ga0105248_134082182	3300009177	Switchgrass Rhizosphere	IFDTEENARSAGDLITALAAERPDHVTLDSVEVREVVASA*
Ga0126373_124444381	3300010048	Tropical Forest Soil	MIIFDSEENARAAGDRVSANFSQIENRDDVTLDDVEVREVVASA*
Ga0126373_130315311	3300010048	Tropical Forest Soil	NVLAMIIFDSEENARAAGGRVGANFSQLEDRGDVTLDGVEVREVVASA*
Ga0127503_110327141	3300010154	Soil	MIIFDSEEDARAAGDRISAIAADAPDDVTLDGVEVREVVASA*
Ga0134082_102785871	3300010303	Grasslands Soil	TGDGGLNGLSMAIFDSEENARAVGDRVSAIAAAAGGDVTLDGVEVREVVASA*
Ga0126379_136984071	3300010366	Tropical Forest Soil	IFDSEENARAAGERVSAIAADVGRDDVTLDSTEVREVVASA*
Ga0134125_128606391	3300010371	Terrestrial Soil	DNARAAGDRMSAVAANAPDDVTLDSVEVREVVASA*
Ga0134126_110680581	3300010396	Terrestrial Soil	NGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA*
Ga0134126_118064092	3300010396	Terrestrial Soil	WRVEGLSMIVFDSADNARAAGDRMSAVAANVPDDVTLDSVEVREVVASA*
Ga0134121_123849612	3300010401	Terrestrial Soil	MIIFDSADNARAAGDRMSAVAANAPDDVTLDSVEVREVVASA*
Ga0137391_101258105	3300011270	Vadose Zone Soil	WPTGGAASNGLSMIIFDSEENARAAGDRVSAVAADAGDDVTLDSVEVREVVASA*
Ga0120134_10400972	3300012004	Permafrost	DSEDDAREAGDRVSAIAAGAPDDVTLDGVEVREVVASA*
Ga0120159_10901051	3300012014	Permafrost	GLSMIIFDSEENARAVGDRISAIAADARDDVTLDGVEVREVVASV*
Ga0120139_10421682	3300012019	Permafrost	GGELNGLSIIIFDSEENARAAGDRVSAIASAAPDDVTLDGVEVREVVASA*
Ga0137382_104086183	3300012200	Vadose Zone Soil	FDSAENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0137380_103178606	3300012206	Vadose Zone Soil	LSLIIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0137380_106411982	3300012206	Vadose Zone Soil	FDSEENARAAGDRVSAIASTAGDDVTLDGVEVREVVASA*
Ga0137379_112489811	3300012209	Vadose Zone Soil	MIIFDSEENARAAGDRISAIAADAPDDVTLDGVEVREVVASA*
Ga0157304_10116663	3300012882	Soil	FDSEENARTAGDRISAIAASSPDDVTLDGVEVREVVASA*
Ga0137407_122048501	3300012930	Vadose Zone Soil	EARAAGDRVSAIASAATDDVTLNGVEVREVVASA*
Ga0164300_111552541	3300012951	Soil	MVIFASEESARAAGERIKAVAESAPDDVTLDGTEVREVVASA*
Ga0164301_108250171	3300012960	Soil	IIFESEEDARGAGDRISAIAADAPEDVTLDGVEVREVVASA*
Ga0164302_100088611	3300012961	Soil	IIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0126369_135343841	3300012971	Tropical Forest Soil	SEENARTVGDRISAIAASAADDVTLDEVEVREVVASA*
Ga0134076_102272531	3300012976	Grasslands Soil	NGLSMIIFDSEENARAVGDRISAIAADARDDVTLDGVEVREVVASA*
Ga0120154_11085411	3300013501	Permafrost	LSMIIFDSEENASAAGDRIRAIAGDAPDDVTLDGVEVREVVASA*
Ga0120172_11046681	3300013765	Permafrost	GTWSTGGGESNGLSMIIFDSEENARAVGDRISAIAADARDDVTLDGVEVREVVASV*
Ga0120149_12133862	3300014058	Permafrost	FDSEENARAVGDRISAIAADARDDVTLDGVEVREVVASV*
Ga0120149_12303821	3300014058	Permafrost	ENARAAGDRVSAIASDAPDDVTLDGVEVREVVASA*
Ga0134075_101757962	3300014154	Grasslands Soil	IIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0163163_120337621	3300014325	Switchgrass Rhizosphere	GGGELNGLSMIIFDSEENARAAGDRVSAIAAGARDDVTLDSVEVREVVASA*
Ga0120104_10975451	3300014829	Permafrost	LSMIIFDSEENARAGGDRVSAIAAAAPDDVTLDSVEVREVVASA*
Ga0157376_117590422	3300014969	Miscanthus Rhizosphere	NGLSMIIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0137420_14070121	3300015054	Vadose Zone Soil	MIIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA*
Ga0182006_10999591	3300015261	Rhizosphere	MIIFDSEENARTVGDRISSIAADARDDVTLDGVEVREVVASA*
Ga0132257_1010355332	3300015373	Arabidopsis Rhizosphere	LNVLAMIVFDSEENARAAGDRVSANFSQLESRREVTLDGVEVREVVASA*
Ga0132255_1040513251	3300015374	Arabidopsis Rhizosphere	DSEENARAAGDRVSAIAAAAPDDVTLDGVEVREVVASA*
Ga0184621_101011123	3300018054	Groundwater Sediment	WTWMTGGGETNGLSMIIFDSEENARAAGDRISAIAAAARDDVTLDGVEVREVVASA
Ga0190269_100443914	3300018465	Soil	MTGGGETNGLSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0066669_121754121	3300018482	Grasslands Soil	MIIFDSEENARAAGDRVSAIAADAPDDVTLDSVEVREVVASA
Ga0193751_10018618	3300019888	Soil	MIIFDSEENARAAGDRVSAIATDAPDDVTLDGVEVREVVASA
Ga0224452_11395571	3300022534	Groundwater Sediment	TNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0247790_100841281	3300022915	Soil	FDSEENARTAGERIKSIAADMSDDVTLDGTEVREVVASA
Ga0207653_101875203	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	EENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0207654_102628911	3300025911	Corn Rhizosphere	SMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0207671_111411891	3300025914	Corn Rhizosphere	MIVFDSADNARAAGDRMSAVAANAPDDVTLDSVEVREVVASA
Ga0207664_107445322	3300025929	Agricultural Soil	EENARAAGDRVSAIAARAGDDVTLESVEVREVVASA
Ga0207644_111770582	3300025931	Switchgrass Rhizosphere	LDGLSLVVFDSEENARAAGERVSAIAADAPSDVTLESVEVREVVASA
Ga0207644_113004732	3300025931	Switchgrass Rhizosphere	EESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA
Ga0207665_108595491	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	EVVERRWRVEGLSMIVFDSADNARAAGDRMSAVAANVPDDVTLDSVEVREVVASA
Ga0207679_118266212	3300025945	Corn Rhizosphere	MIIFDSADNERAAGDRMSAVAANAPDDATLDSVEVREVVASA
Ga0207678_112782981	3300026067	Corn Rhizosphere	LSMVIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0207674_112771022	3300026116	Corn Rhizosphere	SEENARRAGDRISAIAADAPDDVTLDGVEVREVVASA
Ga0207683_108803821	3300026121	Miscanthus Rhizosphere	LSMIIFDSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA
Ga0207698_116609603	3300026142	Corn Rhizosphere	MIIFDTEENARAAGDRIRAIAAAAPDDVTLDGVEVREVVASA
Ga0209058_10489171	3300026536	Soil	IFESEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0268266_108682862	3300028379	Switchgrass Rhizosphere	ADNARAAGDRMSAVAANVPDDVTLDSVEVREVVASA
Ga0307291_10620663	3300028707	Soil	IIFDSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA
Ga0307293_100256734	3300028711	Soil	GLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0307284_103941291	3300028799	Soil	APNGLSMIIFDSEENARAAGDRVSAVAADAPDDVTLDSVEVREVVASA
Ga0307292_100607863	3300028811	Soil	TWMTGGGETNGLSMVIFDSEENARAAGDRISAIAAAARDDVTLDGVEVREVVASA
Ga0307312_100337321	3300028828	Soil	TGGAETNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0307312_106156422	3300028828	Soil	ETNGLSMIIFDSEENARAAGDRVSAIAAAARDDVTLDGVEVREVVASA
Ga0307277_100193071	3300028881	Soil	TWTTGGVETNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0307308_103112752	3300028884	Soil	WTTGGVETNGLSMIIFDSEENARAAGDRISAIAADARDDVTLDGVEVREVVASA
Ga0247826_106660281	3300030336	Soil	SGGELNGLSMIIFDSEENARAAGDRISAIAANAPDDVTLDGVEVREVVASA
Ga0170820_140481932	3300031446	Forest Soil	LNVLAMIVFDSEENARAAGDRVGANFSQLESRDDITLDGVEVREVVASA
Ga0318516_103058962	3300031543	Soil	MIIFDSEENARGAADRVKANFARLENRGDVTLDDVEVRLVVASA
Ga0318534_107841111	3300031544	Soil	IIFDAVSKGRAAGFGVSASAAGARDDVTLDSVEVREVVASA
Ga0318538_105755092	3300031546	Soil	MIIFDSEENARGAADRVKANFAQLENRDDVTLDDVEVRVVVASA
Ga0318515_100831895	3300031572	Soil	LNALTMIIFDSEENARGAADRVKANFARLENRGDVTLDDVEVRLVVASA
Ga0318572_105703763	3300031681	Soil	LNGLSMIVFDSEEQARAAGDRVSAIASENRDDVTLDGVEVREVVASA
Ga0318546_111685173	3300031771	Soil	LCDWGVPARAAGVGVRAIAAGARDDVTLDSVEVREVVASA
Ga0318547_106048471	3300031781	Soil	SMIIFDSEENARAAGDRISAIAASAPDDVTLDGVEVREVVASA
Ga0318547_108943742	3300031781	Soil	MIVFDSEEQARAAGDRVSAIASENRDDVTLDGVEVREVVASA
Ga0306921_102882056	3300031912	Soil	LNALTMIIFDSEENARAAGDRISAIAAERPDDVTLDDVEVRLVVASA
Ga0308175_1013932222	3300031938	Soil	GERNGLSMAIFDSEENARAAGDRISAIAADVRDDVTVDGVEVREVVASA
Ga0307479_117379871	3300031962	Hardwood Forest Soil	NGLSMAIFDSEENARAVGDRVSAIASAGRDDITLDGFEVREVVASA
Ga0318553_100713884	3300032068	Soil	LTMIIFDSEENARGAADRVKANFARLENRGDVTLDDVEVRLVVASA
Ga0318518_101934583	3300032090	Soil	MNALTMIIFDSEENARGAADRVKANFARLENRGDVTLDDVEVRLVVASA
Ga0318518_105334911	3300032090	Soil	SMIIFNTEENARAAGERVKAIAADAGRDDVTLDSTEDREVVASA
Ga0307470_109101262	3300032174	Hardwood Forest Soil	DSEESARGAGDRVSAIAADAPDDVTLDGVEVREVVASA
Ga0306920_1002875295	3300032261	Soil	RGAPGGGDFNGLSLINFDSVVNARAAGDRVSAIAAGARDDVTLDSVEVREVVASA
Ga0306920_1004577741	3300032261	Soil	TNGLSMVIFDSEENARAAAGRVRGMAAETTAAETVTIESVEVREVVASA
Ga0306920_1029400112	3300032261	Soil	MMIFDSEENARAAGDRIRAVAASAPDDVTLDDVEVREVVASA
Ga0335077_108548112	3300033158	Soil	MMIFGSEEDARAVGDRISAVAADAPDDVTLDSVEVREVVASA
Ga0310810_104978741	3300033412	Soil	GETNGLSMVIFDSEENARAAGDRVSAIAADAPDDVTLDGVEVREVVASA
Ga0310811_105193121	3300033475	Soil	DSEENARAAGDRVSAIAADARDDVTLDGVEVREVVASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061985

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences