Metagenome Family F061982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061982
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	96 residues
Representative Sequence	MDDARIEQLRREVLSQLGASPSERVTHDLESRVAALEAAVADLQGGSARPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Number of Associated Samples	114
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.85 %
% of genes near scaffold ends (potentially truncated)	38.17 %
% of genes from short scaffolds (< 2000 bps)	77.10 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.603 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.450 % of family members)
Environment Ontology (ENVO)	Unclassified (40.458 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.466 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.62% β-sheet: 1.64% Coil/Unstructured: 55.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03319	EutN_CcmL	44.27
PF00817	IMS	21.37
PF11799	IMS_C	10.69
PF11798	IMS_HHH	5.34
PF02195	ParBc	3.05
PF00936	BMC	2.29
PF00596	Aldolase_II	2.29
PF14238	DUF4340	1.53
PF00535	Glycos_transf_2	0.76
PF03544	TonB_C	0.76
PF14559	TPR_19	0.76
PF13376	OmdA	0.76
PF03129	HGTP_anticodon	0.76
PF03692	CxxCxxCC	0.76
PF00561	Abhydrolase_1	0.76
PF08545	ACP_syn_III	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4576	Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM	Energy production and conversion [C]	88.55
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	21.37
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.76
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.33 %
Unclassified	root	N/A	8.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.06 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	10.69 %
Unclassified	root	N/A	8.40 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.06 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10.69 %
Unclassified	root	N/A	8.40 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Streptomyces sp. AA4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_100470857	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300004157\|Ga0062590_102966571	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300004480\|Ga0062592_101876460	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005093\|Ga0062594_101258253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300005174\|Ga0066680_10193813	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300005181\|Ga0066678_10145957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1476	Open in IMG/M
3300005328\|Ga0070676_10446569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300005330\|Ga0070690_101449170	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005334\|Ga0068869_101030222	Not Available	718	Open in IMG/M
3300005340\|Ga0070689_100015453	All Organisms → cellular organisms → Bacteria → Proteobacteria	5567	Open in IMG/M
3300005340\|Ga0070689_101632760	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005340\|Ga0070689_102137359	Not Available	513	Open in IMG/M
3300005343\|Ga0070687_100186129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300005353\|Ga0070669_100092266	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300005365\|Ga0070688_100376879	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300005438\|Ga0070701_11375344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	507	Open in IMG/M
3300005445\|Ga0070708_100006388	All Organisms → cellular organisms → Bacteria	9385	Open in IMG/M
3300005457\|Ga0070662_100559977	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005467\|Ga0070706_100852953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300005468\|Ga0070707_100039913	All Organisms → cellular organisms → Bacteria	4489	Open in IMG/M
3300005471\|Ga0070698_100484185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1174	Open in IMG/M
3300005518\|Ga0070699_100054932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3449	Open in IMG/M
3300005536\|Ga0070697_100773470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	849	Open in IMG/M
3300005561\|Ga0066699_10191135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1421	Open in IMG/M
3300005576\|Ga0066708_11059268	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005578\|Ga0068854_101604404	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005586\|Ga0066691_10313331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	927	Open in IMG/M
3300005598\|Ga0066706_10161801	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300005598\|Ga0066706_10401437	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005616\|Ga0068852_101072832	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005618\|Ga0068864_100318306	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300005764\|Ga0066903_105920424	Not Available	641	Open in IMG/M
3300005843\|Ga0068860_100050038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3979	Open in IMG/M
3300005844\|Ga0068862_100097999	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300006038\|Ga0075365_10002939	All Organisms → cellular organisms → Bacteria	8611	Open in IMG/M
3300006186\|Ga0075369_10062077	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300006195\|Ga0075366_10026201	All Organisms → cellular organisms → Bacteria	3414	Open in IMG/M
3300006237\|Ga0097621_100244748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1569	Open in IMG/M
3300006844\|Ga0075428_100265718	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300006844\|Ga0075428_100381842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1510	Open in IMG/M
3300006847\|Ga0075431_100710905	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006847\|Ga0075431_100762958	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006852\|Ga0075433_10405477	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300006854\|Ga0075425_100008545	All Organisms → cellular organisms → Bacteria	10863	Open in IMG/M
3300006854\|Ga0075425_101297159	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006969\|Ga0075419_10124782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1669	Open in IMG/M
3300006969\|Ga0075419_11321795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009012\|Ga0066710_104232830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009038\|Ga0099829_10562312	Not Available	948	Open in IMG/M
3300009090\|Ga0099827_11660256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009094\|Ga0111539_11459048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300009098\|Ga0105245_10497668	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300009098\|Ga0105245_10742572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300009101\|Ga0105247_10582462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300009137\|Ga0066709_103374476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009147\|Ga0114129_10459928	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300009148\|Ga0105243_10005311	All Organisms → cellular organisms → Bacteria	10068	Open in IMG/M
3300009148\|Ga0105243_10055204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3156	Open in IMG/M
3300009551\|Ga0105238_12213735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009553\|Ga0105249_10218622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1874	Open in IMG/M
3300010371\|Ga0134125_12230750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010375\|Ga0105239_10172972	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300010400\|Ga0134122_10374695	Not Available	1248	Open in IMG/M
3300010403\|Ga0134123_13615441	Not Available	502	Open in IMG/M
3300011269\|Ga0137392_11532193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300011270\|Ga0137391_10179961	Not Available	1842	Open in IMG/M
3300012202\|Ga0137363_10705708	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012350\|Ga0137372_10919375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012360\|Ga0137375_10006141	All Organisms → cellular organisms → Bacteria	14262	Open in IMG/M
3300012363\|Ga0137390_10008882	All Organisms → cellular organisms → Bacteria	8737	Open in IMG/M
3300012532\|Ga0137373_10176007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1782	Open in IMG/M
3300012901\|Ga0157288_10085165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300012922\|Ga0137394_10213014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300012922\|Ga0137394_10991269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300012944\|Ga0137410_10284486	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300014326\|Ga0157380_10310524	All Organisms → cellular organisms → Bacteria → Acidobacteria	1457	Open in IMG/M
3300014969\|Ga0157376_12049205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300015245\|Ga0137409_10252588	All Organisms → cellular organisms → Bacteria → Acidobacteria	1566	Open in IMG/M
3300015372\|Ga0132256_100487834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300015374\|Ga0132255_100182375	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300018083\|Ga0184628_10017604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3494	Open in IMG/M
3300018469\|Ga0190270_11799917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300018476\|Ga0190274_11631734	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300019361\|Ga0173482_10609891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300020001\|Ga0193731_1066223	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300022886\|Ga0247746_1091533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300025899\|Ga0207642_10234638	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300025907\|Ga0207645_10134079	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300025908\|Ga0207643_10047282	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300025908\|Ga0207643_10816336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300025910\|Ga0207684_10042608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3848	Open in IMG/M
3300025910\|Ga0207684_10777482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300025910\|Ga0207684_11424709	Not Available	566	Open in IMG/M
3300025918\|Ga0207662_10002561	All Organisms → cellular organisms → Bacteria	9156	Open in IMG/M
3300025922\|Ga0207646_11066030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	712	Open in IMG/M
3300025923\|Ga0207681_10076274	All Organisms → cellular organisms → Bacteria	2354	Open in IMG/M
3300025925\|Ga0207650_11804613	Not Available	517	Open in IMG/M
3300025930\|Ga0207701_10184537	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300025933\|Ga0207706_10828219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	785	Open in IMG/M
3300025935\|Ga0207709_10596988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	874	Open in IMG/M
3300025937\|Ga0207669_10620585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	881	Open in IMG/M
3300025941\|Ga0207711_10906851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	819	Open in IMG/M
3300025961\|Ga0207712_11400264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300026023\|Ga0207677_10157706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300026023\|Ga0207677_10226871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1502	Open in IMG/M
3300026035\|Ga0207703_10225855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1676	Open in IMG/M
3300026088\|Ga0207641_10156450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2068	Open in IMG/M
3300026089\|Ga0207648_10001182	All Organisms → cellular organisms → Bacteria	29226	Open in IMG/M
3300026304\|Ga0209240_1011512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3355	Open in IMG/M
3300026319\|Ga0209647_1002041	All Organisms → cellular organisms → Bacteria	16615	Open in IMG/M
3300026542\|Ga0209805_1207792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300026548\|Ga0209161_10188710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300027907\|Ga0207428_10000066	All Organisms → cellular organisms → Bacteria	150622	Open in IMG/M
3300027907\|Ga0207428_10511504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300027909\|Ga0209382_10001616	All Organisms → cellular organisms → Bacteria	35005	Open in IMG/M
3300027909\|Ga0209382_11582910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300028380\|Ga0268265_12527695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300028811\|Ga0307292_10191907	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300028828\|Ga0307312_10389705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300028828\|Ga0307312_10498109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300030336\|Ga0247826_10222237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300031226\|Ga0307497_10175930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	909	Open in IMG/M
3300031366\|Ga0307506_10316787	Not Available	615	Open in IMG/M
3300031562\|Ga0310886_10119296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1344	Open in IMG/M
3300031740\|Ga0307468_100421537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300031913\|Ga0310891_10164977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	727	Open in IMG/M
3300032013\|Ga0310906_10032192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2403	Open in IMG/M
3300032017\|Ga0310899_10021668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2086	Open in IMG/M
3300032179\|Ga0310889_10054614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1574	Open in IMG/M
3300033407\|Ga0214472_10300182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.49%
Host-Associated	Host-Associated	43.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.73%
Plants	Host-Associated → Plants	43.51%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.21%
Roots	Host-Associated → Plants → Roots	3.05%
Sediment	Environmental → Aquatic → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.37%
Loam	Environmental → Terrestrial → Soil → Loam	14.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.82%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1004708572	3300004114	Soil	MDDSRIEQLRREVLTQLGASPAERVTHDLESRVAALEAAVADLLGGSARPVPTASRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0062590_1029665711	3300004157	Soil	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVADLRGGITRPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPC
Ga0062592_1018764601	3300004480	Soil	MDDARIEQLRRDVLSQLGSSPSGRATHDLESRVAALEAAVADLQDGAARPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDK
Ga0062594_1012582531	3300005093	Soil	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0066680_101938131	3300005174	Soil	RREVMQQLGGSATERATHDLESRVAALEAAVAQLAGGRAPALAPAPRGFTHPSLQVLSVAGGTDRCVMEPDKPCVQSHACKTFGH*
Ga0066678_101459571	3300005181	Soil	MDDARIEQIRREVMQQLGGSATERATHDLESRVAALEAAVAQLAGGRAPALAPAPRGFTHPSLQVLSVAGGTDRCVMEPDKPCVQSHACK
Ga0070676_104465691	3300005328	Miscanthus Rhizosphere	WTRPWSGSSTPWRWAREAPGPLIVDDSRIEQLRREVLSQLGSSPSERAAHDLESRVAALEAAVADLLGGHHRDAWLQGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070690_1014491702	3300005330	Switchgrass Rhizosphere	MDDSRIEQLRREVLTQLGASPSERAAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHAC
Ga0068869_1010302222	3300005334	Miscanthus Rhizosphere	MDDSRIEQIRREVLSALGGTPAERATHDLESRVAALEAAVAEMRQGLPAAPSPLPRGSSHPSLQVLGPAAGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070689_1000154531	3300005340	Switchgrass Rhizosphere	IEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070689_1016327602	3300005340	Switchgrass Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVAELRGGSTRPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070689_1021373591	3300005340	Switchgrass Rhizosphere	MDDSRIEQIRREVLSALGGSPAERATHDLESRVAALEAAVAEMRQDLPAAPSPLPRGRSHPSLQVLGPGAGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070687_1001861292	3300005343	Switchgrass Rhizosphere	QLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070669_1000922662	3300005353	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070688_1003768791	3300005365	Switchgrass Rhizosphere	PLTMDDSRIEQLRREVLTQLGASPSERAAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070701_113753441	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070708_1000063888	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGTLGASPAERVTHDLESRVAALEAAVAELLGGHHRGEWLLGGGPGAHAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSQACRTFGH*
Ga0070662_1005599772	3300005457	Corn Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0070706_1008529531	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIEQIRREVMQQLGGTPVETATHDLESRVSALEAAVAQLAGGRAPALAPAPRGLTHPSLQVLAIAGGSDRCVMEPDKPCVQSHACKTFGH*
Ga0070707_1000399135	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGQLGASSAERATHDLESRVAALEAAVAELVGGGPGAHAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSQACRTFGH*
Ga0070698_1004841851	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLLGGHHRGAWLQAGGAPPPPLARRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0070699_1000549324	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGTLGASPAERVTHDLESRVAALEAAVADLHGGHHRGGWLQGGGPGPAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0070697_1007734703	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIEQIRREVMQQLGGTPVETATHDLESRVSALEAAVAQLAGGRAPALASAPRGLTHPSLQVLAIAGGSDRCVMEPDKPCVQSHACKTFGH*
Ga0066699_101911355	3300005561	Soil	MDDARIDQIRREVLSELAASPRERASGSLESRVAALEAAVAELARGSRPAPALPRGLGHPSLQVLAVPGGSDRCLMEPDKPCVQSHACRTLGY*
Ga0066708_110592681	3300005576	Soil	MDDSRIEQIRREVLGALGSSPAEGATRDLESRVAAVERALAALLGRDAPDAGRDRSTLVRGLSHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0068854_1016044042	3300005578	Corn Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVAELKGGTVRLAAPAPRGQAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0066691_103133311	3300005586	Soil	MDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLRGGHHRGAWLQAGGAPLTAVAPRGHPHPSLQVLGPGGGGDRCLMEPDK
Ga0066706_101618012	3300005598	Soil	MDDARIDQIRREVLSELAASPPARASGSLESRVAALEAAVAELARGSRPAPALPRGLGHPSLQVLAVHGGSDRCLMEPDKPCVQSHACRTLGY*
Ga0066706_104014372	3300005598	Soil	MDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLHGGHHRGAWLQAGGAPLTAVAPRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSQACRTFGH*
Ga0068852_1010728322	3300005616	Corn Rhizosphere	MDDSRIEQLRREVLSQLGSSPTERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0068864_1003183063	3300005618	Switchgrass Rhizosphere	MDDSRIEQLRREVLTQLGASPSERAAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0066903_1059204242	3300005764	Tropical Forest Soil	MDDARIEQIRREVMSQLGASSSAERATHDLESRVSALEAAVAELRGGGTPITSAPRGLAHPSLQVLSISGGSDRCVMEPDKPCVQSHACRTFGH*
Ga0068860_1000500389	3300005843	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERAAHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0068862_1000979991	3300005844	Switchgrass Rhizosphere	EQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075365_100029392	3300006038	Populus Endosphere	MDDARIEQLRREVLSQIGSSPTERATHDLESRVAALEAAVADLLGGHHRDAWLQGARPVPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075369_100620773	3300006186	Populus Endosphere	MDDARIEQLRREVLSQIGSSPTERATHDLESRVAALEAAVADLLGGHHRDAWLQGARLLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075366_100262015	3300006195	Populus Endosphere	MDDARIEQLRREVLGQLGSSPSERATHDLESRVAALEAAVAEMQGGSARPLPTASRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0097621_1002447481	3300006237	Miscanthus Rhizosphere	PLTMDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWRQGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075428_1002657183	3300006844	Populus Rhizosphere	VDDARIEQLRREVLTQLGASPAERVTHDLESRVAALEAAVADLQGGGTRPLALAPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0075428_1003818422	3300006844	Populus Rhizosphere	MDDARIEQLRREVLSQIGSSPTERATHDLESRVAALEAAVADLLGGHHRDAWLQGARPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075431_1007109054	3300006847	Populus Rhizosphere	MDDSRIEQLRRDVLAQLGASPSERVAHDLESRVSALEAAVADLRGGSARPAPAVPRGHAHPSLQVLGPGGGGDRCLMEPDK
Ga0075431_1007629582	3300006847	Populus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLQGARPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075433_104054773	3300006852	Populus Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVADLRGTNARPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSQACRTFGH*
Ga0075425_10000854511	3300006854	Populus Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVADLRGTNARPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075425_1012971593	3300006854	Populus Rhizosphere	MDDARIDQLRREVLGQLGASPAERVTHDLESRVAALEAAVAELLGGAPAAHAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0075419_101247824	3300006969	Populus Rhizosphere	MDDARIEQLRREVLSQIGSSPTERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0075419_113217951	3300006969	Populus Rhizosphere	VDDARIEQLRREVLTQLGASPAERVTHDLESRVAALEAAVADLQGGTRPLAPAPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0066710_1042328302	3300009012	Grasslands Soil	STRWRWAREAPAHLTMDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLHGGHHRDAWLQAGGAPPTALARRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGN
Ga0099829_105623122	3300009038	Vadose Zone Soil	MDDARIEQIRREVLSQLGGSPVEKATHDLESRVAALEAAVVELARGHVPASLSAPASIPAPRGLTHPSLQVLTLAGGSDHCVMEPDKPCVQSHACKTFGH*
Ga0099827_116602562	3300009090	Vadose Zone Soil	MDDARIDQIRREVLAQLGEPPAERATHDLESRVAALEAAVADLGQGRVAVLSAPPRGISHPSLQVLAVAGGSDRCLMEPDKPCVQSHACQTFGH*
Ga0111539_114590482	3300009094	Populus Rhizosphere	MDDARIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0105245_104976681	3300009098	Miscanthus Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEATVAELKGGSGRPAPPAPRGFAHPSLQVLGPSGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0105245_107425721	3300009098	Miscanthus Rhizosphere	RIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEADKPCVQSHACRTFGH*
Ga0105247_105824622	3300009101	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHDRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0066709_1033744762	3300009137	Grasslands Soil	MDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLRGGHHRGAWLQAGGAPLTAVAPRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0114129_104599285	3300009147	Populus Rhizosphere	MDDARIDQLRREVLGQLGASSAERATHDLESRVAALEAAVAELLGGHNRGEWLLGGGPGAHAATAPRGHSHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0105243_1000531118	3300009148	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0105243_100552044	3300009148	Miscanthus Rhizosphere	MDDARIDELRREVLSQLASSPAERATEDLESRVAALEAAVAELRHGRPGAAIASPLGRGHAHPSLQVLGPGGGGERCVMEPDKPCVQSHACRTFGH*
Ga0105238_122137351	3300009551	Corn Rhizosphere	TQLGASPGERATHDLESRVAALEAAVADLQGGSARPAPSVPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0105249_102186221	3300009553	Switchgrass Rhizosphere	EVLSQLGSSPSERAAHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0134125_122307502	3300010371	Terrestrial Soil	MDDARIEQIRREVMTQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0105239_101729721	3300010375	Corn Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEATVAELKGGSARPAPPAPRGFAHPSLQVLGPSGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0134122_103746954	3300010400	Terrestrial Soil	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFSTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0134123_136154412	3300010403	Terrestrial Soil	MDDARIEQIRREVMTQLGSSPSERATHDLESRVAALEAAVAELQGGAARPASTAPRGYAHPSLQVLGPGGGGDRCVMEP
Ga0137392_115321932	3300011269	Vadose Zone Soil	DARIDQLRRDVLAQLGASPAERVTHDLESRVAALEAAVADLLGGHHRGEWLQGGSRSFPPAPRGHSHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0137391_101799611	3300011270	Vadose Zone Soil	MDDARIEQLRREVLAGLGASPTERVAQDLESRVAALEAAVADLLGGHHRGEWLQGGSRSFPPAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCV
Ga0137363_107057082	3300012202	Vadose Zone Soil	MDDARIEQIRREVMSQLGGSPVEKATHDLESRVAALEAAVIDLARGHVPASISGPASIPAPRGLTHPSLQVLTIAGGSDRCVMEPDKPCVQSHACKTFGH*
Ga0137372_109193752	3300012350	Vadose Zone Soil	MDDARIDQLRREVLGQLGASPAERVTHDLESRVAALESAVADLHGGHHRGAWLQAGGTPPTARRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0137375_1000614111	3300012360	Vadose Zone Soil	MDDARIDQLRREVLGQLGASPAERVTHDLESRVAALESAVADLQVGGAPPAALARRGHPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0137390_1000888215	3300012363	Vadose Zone Soil	MDDARIEQLRREVLAGLGASPTERVAQDLESRVAALEAAVADLLGGHHRGEWLQGGSRSFPPAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0137373_101760072	3300012532	Vadose Zone Soil	MDDARIDQLRREVLGQLGASPAERVTHDLESRVAALESAVADLQGGSRPVPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH*
Ga0157288_100851652	3300012901	Soil	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVAELRGGSPRPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0137394_102130144	3300012922	Vadose Zone Soil	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVADLLGGHHRDAWLQGGSARPLPTASRGHAHPSLQVLGPGGGGDRCLMEPDQPCVQSHACRTFGH*
Ga0137394_109912693	3300012922	Vadose Zone Soil	MDDARIDQLRRDVLAQLGASPAERVTHDLESRVAALEAAVADLQGGGTRPAVAAPRGHAHPSLQVLGPGGGGDRCLMEPDK
Ga0137410_102844862	3300012944	Vadose Zone Soil	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVADLLGGHHRDAWLPGGSARPLPTASRGHAHPSLQVLGPGGGGDRCLMEPDQPCVQSHACRTFGH*
Ga0157380_103105245	3300014326	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERAAHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQ
Ga0157376_120492052	3300014969	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGY*
Ga0137409_102525881	3300015245	Vadose Zone Soil	MDDARIDQLRREVLGQLGASPAERVTHDLESRVAALESAVADLHGGHHRDAWLQAGGAPPTALARRGHPHPSLQVLGPG
Ga0132256_1004878342	3300015372	Arabidopsis Rhizosphere	EVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0132255_1001823754	3300015374	Arabidopsis Rhizosphere	MDEARIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLQGARPVPTTSRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH*
Ga0184628_100176042	3300018083	Groundwater Sediment	MDDSRIEQIRREVLSALGASPVERATHDLESRVAALEAAVSELRQGAPLGAAAPVRGRSHPSLQVLGPGGGSDRCVMEPDKPCVQSHACRTFGH
Ga0190270_117999172	3300018469	Soil	MDDAQIEKLRREVLSALGASPVERATHDLESRVAALEAAVSELRQGAPLGAAPPVRGRSHPSLQVLGPGGSGDRCVMEPDKPCVQSHACRTFGH
Ga0190274_116317342	3300018476	Soil	MDDSRIEQIRREVLSALGASPVERATHDLESRVAALEAAVSELRQGAPLGAAPPVRGRSHPSLQVLGPGGGSDRCVMEPDKPCVQSHACRTFGH
Ga0173482_106098911	3300019361	Soil	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEATVAELKGGSARPAPPAPRGFAHPSLQVLGPSGGGDRCVMEPDKPCVQSHACRTFGH
Ga0193731_10662232	3300020001	Soil	MDDTRIDQLRRDVLAQLGASPAERVTHDLESRVAALEAAVADLQGGGTRPAVAAPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0247746_10915332	3300022886	Soil	AREPPERLTMDDARIEQLRREVLSQLGSSPAERATHDLESRVAALETAVADLLGGHHRDSSLQAARPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207642_102346382	3300025899	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207645_101340793	3300025907	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLQGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207643_100472823	3300025908	Miscanthus Rhizosphere	PPERLTMDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207643_108163362	3300025908	Miscanthus Rhizosphere	APEAHGPLTMDDSRIEQLRREVLTQLGASPSERAAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207684_100426086	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGTLGASPAERVTHDLESRVAALEAAVAELLGGHHRGEWLLGGGPGAHAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSQACRTFGH
Ga0207684_107774821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIEQIRREVMQQLGGTPVETATHDLESRVSALEAAVAQLAGGRAPALAPAPRGLTHPSLQVLAIAGGSDRCVMEPDKPCVQSHACKTFGH
Ga0207684_114247091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGQLGASPAERATHDLESRVAALESAVADLLGGHHRGAWLQAGGAPPPPLARRGHPHPSLQVLGPGGGGDRCLM
Ga0207662_1000256115	3300025918	Switchgrass Rhizosphere	MDDSRIEQLRREVLTQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWRQGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207646_110660301	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDDARIDQLRREVLGQLGASSAERATHDLESRVAALEAAVAELVGGGPGAHAATAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSQACR
Ga0207681_100762743	3300025923	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207650_118046132	3300025925	Switchgrass Rhizosphere	MDDSRIEQLRREVLTQLGASPSERAAHDLESRVAALEAAVADLQGGSARPAPTAPRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207701_101845372	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207706_108282191	3300025933	Corn Rhizosphere	MDDSRIEQLRREVLTQLGASPSERVTHDLESRVAALEAAVAELRGGSTRPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207709_105969881	3300025935	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGVT
Ga0207669_106205853	3300025937	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTF
Ga0207711_109068513	3300025941	Switchgrass Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTF
Ga0207712_114002642	3300025961	Switchgrass Rhizosphere	SRIEQLRREVLSQLGSSPYERATHDLESRVAALEAAVADLLGGHYRDAWLIGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207677_101577063	3300026023	Miscanthus Rhizosphere	EPPERLTMDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207677_102268711	3300026023	Miscanthus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDK
Ga0207703_102258552	3300026035	Switchgrass Rhizosphere	WAREAPGPLTMDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207641_101564501	3300026088	Switchgrass Rhizosphere	EAPGPLIVDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207648_100011821	3300026089	Miscanthus Rhizosphere	STPWRWAREAPGPLTMDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0209240_10115122	3300026304	Grasslands Soil	MDDARIEQLRREVLAGLGASPTERVAQDLESRVAALEAAVADLLGGHHRGEWLQGGSRSFPPAPRGHSHPSLRVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0209647_100204121	3300026319	Grasslands Soil	MDDTRIDQIRREVLGQLGGSPAERVTHDLESRVAALESAVADLHGGHHRGEWLRGGGAPPTAVARRGYPHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0209805_12077921	3300026542	Soil	MDDARIDQIRREVLSELAASPRERASGSLESRVAALEAAVAELARGSRPAPALPRGLGHPSLQVLAVPGGSDRCLMEPDKPCVQSHACRTLGY
Ga0209161_101887102	3300026548	Soil	APERAMDDARIDQIRREVLSELAASPPARASGSLESRVAALEAAVAELARGSRPAPALPRGLGHPSLQVLAVHGGSDRCLMEPDKPCVQSHACRTLGY
Ga0207428_100000662	3300027907	Populus Rhizosphere	MDDARIEQLRREVLGQLGSSPSERATHDLESRVAALEAAVAEMQGGSARPLPTASRGHAHPSLQVLGPAGGGDRCVMEPDKPCVQSHACRTFGH
Ga0207428_105115042	3300027907	Populus Rhizosphere	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0209382_100016169	3300027909	Populus Rhizosphere	VDDARIEQLRREVLTQLGASPAERVTHDLESRVAALEAAVADLQGGGTRPLALAPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0209382_115829102	3300027909	Populus Rhizosphere	MDDARIEQLRREVLSQLGSSPSEAATHDLESRVAALEAAVADLLSGHHRDASLQGGGARPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0268265_125276951	3300028380	Switchgrass Rhizosphere	IEQLRREVLSQLGSSPSERATHDLESRVAALEAAVAEMQGTKPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0307292_101919072	3300028811	Soil	MDDARIDQLRRDVLAQLGASPAERVTHDLESRVAALESAVADLLGGHHRGEWLQAGGARPVVIAPRGHTHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0307312_103897051	3300028828	Soil	WSASSMPWRWAREVSGTLTMDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVADLRGGSARPAPPAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0307312_104981091	3300028828	Soil	RREVLGQLGASPSERVAHDLESRVAALEAAVADLLGGSRSFPPAPRGHAHPSLQVLGPGGGGDRCLMEPDKPCVQSHACRTFGH
Ga0247826_102222372	3300030336	Soil	DDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0307497_101759303	3300031226	Soil	MDDARIEQLRREVLSQLGASPSERVTHDLESRVAALEAAVADLQGGSARPAPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0307506_103167871	3300031366	Soil	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVADLRGGSRSLPPAPPGHAHPSLQVLGPGGSGDRCVMEPDKPCVQSHACRTFGH
Ga0310886_101192962	3300031562	Soil	PSERAAHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0307468_1004215371	3300031740	Hardwood Forest Soil	MDDSRIEQLRREVLTQLGASPSERVAHDLESRVAALEAAVAELQGGSVRLAPPAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTF
Ga0310891_101649773	3300031913	Soil	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRT
Ga0310906_100321921	3300032013	Soil	RIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGHAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0310899_100216682	3300032017	Soil	MDDSRIEQLRREVLSQLGSSPSERAAHDLESRVAALEAAVADLLGGHHRDAWLLGTNPRPLPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0310895_102682442	3300032122	Soil	SSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQSHACRTFGH
Ga0310889_100546146	3300032179	Soil	MDDSRIEQLRREVLSQLGSSPSERATHDLESRVAALEAAVADLQGTNPRPFPTAPRGYAHPSLQVLGPGGGGDRCVMEPDKPCVQ
Ga0214472_103001825	3300033407	Soil	MDDARIEQIRREVLSRLAGSPAERTAHDLESRVAALEAAVADLRHGVRVSAPGPARGHAHPALQVLGPGVGGDRCVMEPDKPCV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences