Metagenome / Metatranscriptome Family F061975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061975
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	48 residues
Representative Sequence	MFKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Number of Associated Samples	94
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.52 %
% of genes near scaffold ends (potentially truncated)	23.66 %
% of genes from short scaffolds (< 2000 bps)	61.07 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.466 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (19.847 % of family members)
Environment Ontology (ENVO)	Unclassified (69.466 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.626 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03237	Terminase_6N	1.53
PF00166	Cpn10	0.76
PF06945	DUF1289	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
All Organisms	root	All Organisms	30.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
cellular organisms	root	All Organisms → cellular organisms	27.48 %
Viruses	superkingdom	All Organisms → Viruses	3.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.76 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.76 %
Cnidaria	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.76 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	0.76 %
Anthozoa	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.76 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.76 %
Hexacorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.76 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.76 %
Actiniaria	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.76 %
Edwardsiidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae	0.76 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Nematostella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella	0.76 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.76 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.47 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	11.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.29 %
Nematostella vectensis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis	0.76 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.76 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10009082	Not Available	6558	Open in IMG/M
3300000101\|DelMOSum2010_c10032865	Not Available	2823	Open in IMG/M
3300000101\|DelMOSum2010_c10042177	Not Available	2369	Open in IMG/M
3300000101\|DelMOSum2010_c10241453	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300000115\|DelMOSum2011_c10043932	Not Available	1841	Open in IMG/M
3300000115\|DelMOSum2011_c10129750	Not Available	776	Open in IMG/M
3300000116\|DelMOSpr2010_c10086258	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300000116\|DelMOSpr2010_c10162389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	752	Open in IMG/M
3300000117\|DelMOWin2010_c10135014	Not Available	838	Open in IMG/M
3300001450\|JGI24006J15134_10032322	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300001450\|JGI24006J15134_10046869	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300001450\|JGI24006J15134_10049252	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300001460\|JGI24003J15210_10029645	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300001472\|JGI24004J15324_10031146	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300001472\|JGI24004J15324_10052807	Not Available	1202	Open in IMG/M
3300001748\|JGI11772J19994_1004138	Not Available	2824	Open in IMG/M
3300002242\|KVWGV2_10986126	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300002483\|JGI25132J35274_1000143	Not Available	19318	Open in IMG/M
3300002483\|JGI25132J35274_1068967	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis	742	Open in IMG/M
3300004448\|Ga0065861_1014589	Not Available	784	Open in IMG/M
3300004448\|Ga0065861_1018407	Not Available	2545	Open in IMG/M
3300004448\|Ga0065861_1064288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	864	Open in IMG/M
3300005057\|Ga0068511_1067949	Not Available	606	Open in IMG/M
3300005346\|Ga0074242_10696874	Not Available	745	Open in IMG/M
3300005611\|Ga0074647_1002951	Not Available	5115	Open in IMG/M
3300006025\|Ga0075474_10220118	Not Available	577	Open in IMG/M
3300006029\|Ga0075466_1062768	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300006191\|Ga0075447_10102811	Not Available	989	Open in IMG/M
3300006802\|Ga0070749_10388572	Not Available	771	Open in IMG/M
3300006810\|Ga0070754_10268639	Not Available	774	Open in IMG/M
3300006916\|Ga0070750_10122920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300006916\|Ga0070750_10131588	Not Available	1142	Open in IMG/M
3300006947\|Ga0075444_10167198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	910	Open in IMG/M
3300007276\|Ga0070747_1332069	Not Available	520	Open in IMG/M
3300007640\|Ga0070751_1022968	All Organisms → Viruses → Predicted Viral	2960	Open in IMG/M
3300007640\|Ga0070751_1048158	Not Available	1881	Open in IMG/M
3300007640\|Ga0070751_1235188	Not Available	701	Open in IMG/M
3300008012\|Ga0075480_10297726	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300008217\|Ga0114899_1096135	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300008221\|Ga0114916_1033406	Not Available	1572	Open in IMG/M
3300008221\|Ga0114916_1094507	Not Available	734	Open in IMG/M
3300009124\|Ga0118687_10114453	Not Available	943	Open in IMG/M
3300009149\|Ga0114918_10112254	All Organisms → cellular organisms → Bacteria → Proteobacteria	1674	Open in IMG/M
3300009149\|Ga0114918_10578636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	595	Open in IMG/M
3300009409\|Ga0114993_10692079	Not Available	743	Open in IMG/M
3300009413\|Ga0114902_1080230	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300009428\|Ga0114915_1011216	Not Available	3409	Open in IMG/M
3300009435\|Ga0115546_1124521	Not Available	922	Open in IMG/M
3300009512\|Ga0115003_10012474	All Organisms → cellular organisms → Bacteria	5871	Open in IMG/M
3300009529\|Ga0114919_10370886	Not Available	997	Open in IMG/M
3300009550\|Ga0115013_10011706	Not Available	4599	Open in IMG/M
3300010150\|Ga0098056_1065482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1250	Open in IMG/M
3300010368\|Ga0129324_10065820	Not Available	1622	Open in IMG/M
3300010883\|Ga0133547_11351299	Not Available	1348	Open in IMG/M
3300010883\|Ga0133547_11476200	Not Available	1278	Open in IMG/M
3300011013\|Ga0114934_10347168	Not Available	665	Open in IMG/M
3300011253\|Ga0151671_1052670	Not Available	625	Open in IMG/M
3300012952\|Ga0163180_10309888	Not Available	1125	Open in IMG/M
3300017733\|Ga0181426_1044902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	871	Open in IMG/M
3300017733\|Ga0181426_1113324	Not Available	545	Open in IMG/M
3300017743\|Ga0181402_1064413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	973	Open in IMG/M
3300017773\|Ga0181386_1070516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1107	Open in IMG/M
3300017781\|Ga0181423_1025124	Not Available	2429	Open in IMG/M
3300017951\|Ga0181577_10098079	Not Available	2033	Open in IMG/M
3300017963\|Ga0180437_10068349	All Organisms → cellular organisms → Bacteria → Proteobacteria	3168	Open in IMG/M
3300017991\|Ga0180434_10755029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	736	Open in IMG/M
3300018682\|Ga0188851_1004061	Not Available	2180	Open in IMG/M
3300020374\|Ga0211477_10127218	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300021371\|Ga0213863_10002175	All Organisms → cellular organisms → Bacteria	14021	Open in IMG/M
3300021373\|Ga0213865_10210723	Not Available	955	Open in IMG/M
3300021373\|Ga0213865_10463783	Not Available	548	Open in IMG/M
3300021389\|Ga0213868_10421431	Not Available	734	Open in IMG/M
3300021958\|Ga0222718_10028432	All Organisms → Viruses → Predicted Viral	3771	Open in IMG/M
3300022057\|Ga0212025_1042416	Not Available	782	Open in IMG/M
3300022068\|Ga0212021_1069398	Not Available	722	Open in IMG/M
3300022068\|Ga0212021_1073250	Not Available	702	Open in IMG/M
3300022164\|Ga0212022_1018508	Not Available	1031	Open in IMG/M
3300022169\|Ga0196903_1003785	Not Available	2016	Open in IMG/M
3300025098\|Ga0208434_1107959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	536	Open in IMG/M
3300025120\|Ga0209535_1077269	Not Available	1279	Open in IMG/M
3300025120\|Ga0209535_1098161	Not Available	1057	Open in IMG/M
3300025132\|Ga0209232_1162540	Not Available	705	Open in IMG/M
3300025132\|Ga0209232_1204555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	601	Open in IMG/M
3300025266\|Ga0208032_1001736	Not Available	9061	Open in IMG/M
3300025276\|Ga0208814_1002988	Not Available	7073	Open in IMG/M
3300025276\|Ga0208814_1026466	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1879	Open in IMG/M
3300025508\|Ga0208148_1024444	Not Available	1681	Open in IMG/M
3300025508\|Ga0208148_1057448	Not Available	940	Open in IMG/M
3300025645\|Ga0208643_1007351	Not Available	4505	Open in IMG/M
3300025759\|Ga0208899_1019359	Not Available	3447	Open in IMG/M
3300025769\|Ga0208767_1196290	Not Available	682	Open in IMG/M
3300025815\|Ga0208785_1076588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	868	Open in IMG/M
3300025879\|Ga0209555_10199103	Not Available	808	Open in IMG/M
3300027813\|Ga0209090_10343152	Not Available	730	Open in IMG/M
3300027859\|Ga0209503_10013450	All Organisms → Viruses	3623	Open in IMG/M
3300028022\|Ga0256382_1075531	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300028125\|Ga0256368_1006014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1925	Open in IMG/M
3300029448\|Ga0183755_1000604	Not Available	21317	Open in IMG/M
3300031143\|Ga0308025_1278283	Not Available	547	Open in IMG/M
3300031519\|Ga0307488_10311303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1009	Open in IMG/M
3300031578\|Ga0307376_10457083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	831	Open in IMG/M
3300031598\|Ga0308019_10115449	Not Available	1086	Open in IMG/M
3300031626\|Ga0302121_10007127	Not Available	4272	Open in IMG/M
3300032073\|Ga0315315_11064585	Not Available	722	Open in IMG/M
3300033742\|Ga0314858_000328	Not Available	5720	Open in IMG/M
3300033742\|Ga0314858_014149	Not Available	1668	Open in IMG/M
3300033742\|Ga0314858_028128	Not Available	1283	Open in IMG/M
3300033742\|Ga0314858_081780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.24%
Terrestrial	Environmental → Terrestrial	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	92.37%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.82%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Sediment	Environmental → Aquatic → Sediment	0.76%
Unclassified	Environmental → Aquatic → Unclassified	0.76%
Soil	Environmental → Terrestrial → Soil	0.76%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	32.82%
Oceanic	Environmental → Aquatic → Marine → Oceanic	32.06%
Strait	Environmental → Aquatic → Marine → Strait	7.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.87%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.29%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.53%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.53%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.53%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.53%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.76%
Clay	Environmental → Terrestrial → Soil → Clay	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	32.82%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	29.77%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.87%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.53%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.76%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.76%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.76%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.76%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	19.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	18.32%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	8.40%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.63%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	6.87%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	5.34%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.05%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.05%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.29%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.29%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.29%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.29%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.53%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.53%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.53%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.53%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.76%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.76%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.76%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.76%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.76%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.76%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	0.76%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.76%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.76%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.76%
Water	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water	0.76%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005078	Microbial Community from Halfdan Field MHBA5	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009601	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011253	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017991	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300019122	Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022164	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025266	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_1000908210	3300000101	Marine	MYKKTKGYANGGSVKGTKYMAKGGAAKGTKYMAKGGAMKGTKYMAKGGKV*
DelMOSum2010_100328655	3300000101	Marine	MFKKTKGYATGGPVKGTKYMAKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
DelMOSum2010_100421773	3300000101	Marine	MFKKTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
DelMOSum2010_102414531	3300000101	Marine	MFKKTKGYSKGGVSKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
DelMOSum2011_100439321	3300000115	Marine	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
DelMOSum2011_101297502	3300000115	Marine	GYSMGGSVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
DelMOSpr2010_100862585	3300000116	Marine	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMSKGGAMKGTKYMSKGGKV*
DelMOSpr2010_101623891	3300000116	Marine	MFKKTKGYSTGGGVKSTKYMAKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
DelMOWin2010_101350142	3300000117	Marine	MFKRTKMYANGGPVSKGTKYMANGGVAKGTKYMAKGGASIKGTKYMAKGGKV*
JGI24006J15134_100106551	3300001450	Marine	GTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKS*
JGI24006J15134_100323224	3300001450	Marine	MFKRTKGYAMGGSVKGTKYMAKGGAAKGTKYMAMGGAERYQVYGQRWCHERTKYMSKGGKV*
JGI24006J15134_100468691	3300001450	Marine	MFKKTKGYAMGGAVKGTKYKATGGAVMKGTKYKATGGAVMKGTKYKAKGGKS*
JGI24006J15134_100492521	3300001450	Marine	MFKRTKGYASGGAVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGG
JGI24003J15210_100296451	3300001460	Marine	MFKRTKMYAAGGPVKGTKYMSKGGAAKGTKYMAKGGAAKGTKYMSKGGKV*
JGI24004J15324_100049081	3300001472	Marine	TKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKS*
JGI24004J15324_100311461	3300001472	Marine	MFKRTKGYASGGAVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAK
JGI24004J15324_100528073	3300001472	Marine	MFKRTKGYAMGGAVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMSKGGKV*
JGI24004J15324_101358732	3300001472	Marine	KGTKYMSKGGAAKGTKYMAKGGASMKGTKYMSKGGKV*
JGI11772J19994_10041383	3300001748	Saline Water And Sediment	MFKKTKGXXTGGPXKGTKYMAKGGAAQNAKPVKGTKYMAKGGAAQNAKPVKGTKYMSKGGKV*
KVWGV2_109861263	3300002242	Marine Sediment	MFKRTKYYAMGGAVKGSKYMAKGGAMKGSKYMAKGGAMKGSKYMAKGGA
JGI25132J35274_100014320	3300002483	Marine	MFKRTKGYAMGGAVKGRKYAAKGGAMKGSKYMSKGGAMKKSKYMAKGGKV*
JGI25132J35274_10689671	3300002483	Marine	MAKGGAMKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV*
Ga0065861_10145893	3300004448	Marine	MFKKTKGYANGGPVKGTKYMSKGGAMKGTKYKASGGPMKGTKYMAKGGKA*
Ga0065861_10184075	3300004448	Marine	MFKKTKGYSMGGSVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
Ga0065861_10642882	3300004448	Marine	MFKRTKMYAAGGPVKGTKYKATGGAVMKGTKYKATGGAVMKGTKYMAKGGKV*
Ga0068511_10679492	3300005057	Marine Water	KSTKYMSKGGVAKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGKV*
Ga0070770_106071762	3300005078	Water	KGGAAKGTKYMAMGGAAKGTKYMAKGGAAKGTKYMSKGGKV*
Ga0074242_106968742	3300005346	Saline Water And Sediment	MFKKTKGYATGGGVKSTKYMAKGGATKGTMYMSKGGATKGTKYMAKGGATKGTNICQRVAKFNLHFRCHI*
Ga0074647_10029515	3300005611	Saline Water And Sediment	MFKKTKGYSTGGPIKGTKYMAKGGAAQNAKPVKGTKYMAKGGAAQNAKPVKGTKYMSKGGKV*
Ga0075474_102201182	3300006025	Aqueous	MFKKTKGYATGGPVKGTKYMAKGGAAKGTKYMAKGGAAKGTKYMAKGGKV*
Ga0075466_10627683	3300006029	Aqueous	MYAAGGPVKGTKYKATGGAVMKGTKYKATGGAVMKGTKYKAKGGKV*
Ga0075447_101028111	3300006191	Marine	GTKYMSKGGATKGTKYMSKGGATKGTKYMSKGGATKGTKYMSKGGKK*
Ga0070749_103885722	3300006802	Aqueous	MFKRTKGYAMGGSVKGTKYMSKGGAAKGTKYMAKGGAAKGTKYMAKGGKS*
Ga0070754_102686393	3300006810	Aqueous	MFKKTKGYANGGPVKGTKYMSKGGPMKGTKYKASGGPMKGTKYMAKGGKA*
Ga0070750_101229205	3300006916	Aqueous	MFKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
Ga0070750_101315882	3300006916	Aqueous	MFKRTKMYAAGGPVKGTKYKATGGAVMKGTKYKATGGAVMKGTKYKAKGGKV*
Ga0075444_101671981	3300006947	Marine	MFKRTKGYAMGGPAAKGTKYMSKGGAAKGTKYMSKGGSAKGTK*
Ga0075468_101884691	3300007229	Aqueous	GGAAKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKS*
Ga0070747_13320692	3300007276	Aqueous	MLGVIMFKKTKGYSTGGGVKSTKYMAKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
Ga0070751_10229687	3300007640	Aqueous	MFKKTKGYANGGMVKGTKYMSKGGSASKGTKYMSKGGAMKGTKYMAK
Ga0070751_10481584	3300007640	Aqueous	MFKKTKGYAMGGAVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMSKGGKV*
Ga0070751_12351883	3300007640	Aqueous	MGGSVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKV*
Ga0075480_102977263	3300008012	Aqueous	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMS
Ga0114899_10961353	3300008217	Deep Ocean	MYKKTKGYASGGPVKGTKYMAKGGAAKGTKYMAKGGAMKGTKYMAKGGKR*
Ga0114904_10428081	3300008218	Deep Ocean	MKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
Ga0114916_10334065	3300008221	Deep Ocean	MFKRTKGYAMGGPASKGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV*
Ga0114916_10945071	3300008221	Deep Ocean	MTYKRTKGYAMGGPASKGTKYMSRGGAAKGTKYKATGGVMKGTKYKATGG
Ga0118687_101144532	3300009124	Sediment	MYKKTKGYAMGGSVKGTKYMAKGGASNKGTKYMAKGGASMKGTKYMSKGGKV*
Ga0114918_101122542	3300009149	Deep Subsurface	MYKKTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV*
Ga0114918_105786362	3300009149	Deep Subsurface	MFKKTKGYSTGGPIKGTKYMAKGGAAQSTMPVKKTKYMAKGGAAQSTMPVKKTKYMSKGGKV*
Ga0114993_106920792	3300009409	Marine	MFKKTKGYANGGPVKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMAKGGKA*
Ga0114902_10566981	3300009413	Deep Ocean	AKGTKYMAKGGAMKGSKYMAKGGAMKGTKYMSKGGKV*
Ga0114902_10802304	3300009413	Deep Ocean	MYKRTKGYAMGGYVKGTKYMAKGGAAKGTKYMAKGGAMKGTKYMAKGGAM
Ga0114915_10112161	3300009428	Deep Ocean	MFKRTKGYAMGGPASKGTKYMSKGGAAKGTKYIAKGGASMKGTKYMAKGGKA*
Ga0115546_11245214	3300009435	Pelagic Marine	MFKRTKMYAAGGPVKGTKYMAKGGAAKGTKYMAMGGAAKGTKYMAKGGA
Ga0115003_100124749	3300009512	Marine	MFKKTKGYANGGPVKGTKYMSKGGAMKGTKDMPKGGAMKGTKYMAKGGKA*
Ga0114919_103708861	3300009529	Deep Subsurface	IMFKKTKGYATGGGVKSTKYMAKGGAAQNAKPVKGTKYMAKGGAAQNAKPVKGTKYMAKGGKV*
Ga0115013_100117066	3300009550	Marine	MFKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV*
Ga0114914_10424471	3300009601	Deep Ocean	AKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV*
Ga0098056_10654826	3300010150	Marine	MFKRTKHYAMGGAVKGSKYMSKGGAMKGSKYMSKGGAMKGTKYMAKGGAMK
Ga0129324_100658201	3300010368	Freshwater To Marine Saline Gradient	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGK
Ga0133547_113512993	3300010883	Marine	MFKNTKGYANGGPASKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMAKGGKS*
Ga0133547_114762003	3300010883	Marine	MFKKTKGYAMGGSVKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMAKGGKV*
Ga0114934_101866001	3300011013	Deep Subsurface	MKGTKYMAKGGAMKKSKYMAKGGPMKKSKYMAKGGKV*
Ga0114934_103471683	3300011013	Deep Subsurface	MFKKTKGYANGGAAKGTKYMAKGGASSSAKPKGTKYMAKGGAPGAMKGTKYMSKGGKV*
Ga0151671_10526702	3300011253	Marine	AVKSTKYMSKGGVAKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGKV*
Ga0163180_103098881	3300012952	Seawater	MYAMGGGVKGTKYAAKGGATKGTKYMAKGGATKGSKYRAKGGAK*
Ga0181403_11101812	3300017710	Seawater	GAMKGTKYMAKGGAMKGTKYMSKGGSMKGTKYMSKGGKV
Ga0181404_10554833	3300017717	Seawater	SKGGAMKGAKYMSKGGAMKGTKYMAKGGAMKGTKYMSKGGKV
Ga0181426_10449024	3300017733	Seawater	MFKRTKHYAMGGAVKGSKYMSKGGAMKGSKYMSKGGAMKGTKYMAKGGAM
Ga0181426_11133242	3300017733	Seawater	KSTKYMSKGGVAKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGKV
Ga0181402_10644134	3300017743	Seawater	MFKKTKGYAMGGPASKGTKYMARGGAAMKGTKYMARGGAAMKGTKYMSKGGKV
Ga0181407_10377031	3300017753	Seawater	GTKYMAMGGAVKGTKYMSKGGAAKGTKYMSKGGKV
Ga0187220_11561782	3300017768	Seawater	KGGAAKGTKYMAMGGAAKGTKYMAKGGAAKGTKYMSKGGKV
Ga0181386_10705165	3300017773	Seawater	MFKRTKGYAMGGSVKGTKYMAKGGATKGTKYMAKGGAMKGTKYMAKGGAM
Ga0181423_10251242	3300017781	Seawater	MFKRTKGYSKGGVSKGTKYMAKGGSASKGTKYMAKGGAMKGTKYMSKGGKV
Ga0181424_101390373	3300017786	Seawater	SKGGAAKGTKYMSKGGAAKGTKYMAKGGAAKGTKYMSKGGKV
Ga0181577_100980797	3300017951	Salt Marsh	MFKRTKMYAAGGPVSKGTKYMAKGGAAKKTKYMAKGGVAKGTKYMAKGGKV
Ga0180437_100683496	3300017963	Hypersaline Lake Sediment	MFKKTKGYATGGPVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGKV
Ga0180434_107550291	3300017991	Hypersaline Lake Sediment	MYAAGGPVSKGTKYMSKGGVAKGTKYMSKGGVAKGTKYMSKGGVAKG
Ga0188851_10040613	3300018682	Freshwater Lake	MFKKTKGYAMGGSVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMAKGGKV
Ga0188839_10079812	3300019122	Freshwater Lake	MGGSVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMAKGGKV
Ga0211477_101272181	3300020374	Marine	MFKRTKYYAMGGAVKGSKYMSKGGAMKGSKYMAKGGAMKGSKYMAKGGAMK
Ga0213863_1000217515	3300021371	Seawater	MFKKTKGYATGGPVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKV
Ga0213865_102107231	3300021373	Seawater	MYAAGGPVSKGTKYMAKGGAAKKTKYMAKGGVAKGTKYMAKGGKV
Ga0213865_104637832	3300021373	Seawater	MFKRTKGYANGGAVGKGTKYMSNGGAAKKTKYMATGGAASKSTKYMAKGGKV
Ga0213868_104214311	3300021389	Seawater	TGGPVKGTKYMAKGGAAKGTKYMAKGGAAKGTKYMAKGGKV
Ga0222718_100284325	3300021958	Estuarine Water	MYKKTKGYAMGGSVKGTKYMAKGGASNKGTKYMAKGGASMKGTKYMSKGGKV
Ga0222716_101701223	3300021959	Estuarine Water	MSKGGAAKGTKYMAMGGAAKGTKYMAKGGAAKGTKYMSKGGKV
Ga0212025_10424162	3300022057	Aqueous	MFKRTKMYANGGPVSKGTKYMANGGVAKGTKYMAKGGASIKGTKYMAKGGKV
Ga0212021_10693983	3300022068	Aqueous	MFKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV
Ga0212021_10732502	3300022068	Aqueous	MYKKTKGYANGGSVKGTKYMAKGGAAKGTKYMAKGGAMKGTKYMAKGGKV
Ga0212022_10185082	3300022164	Aqueous	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMSKGGKV
Ga0196903_10037851	3300022169	Aqueous	KYMSKGGSASKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMSKGGKV
Ga0196903_10042611	3300022169	Aqueous	YMAKGGAAKGTKYMSKGGAAKGTKYMAKGGAAKGTKYMSKGGKV
Ga0208434_11079591	3300025098	Marine	MFKRTKGYAMGGAVKGTKYMSKGGAAKGTKYMSKGGAMKGTKYM
Ga0209535_10772692	3300025120	Marine	MFKRTKGYAMGGAVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMSKGGKV
Ga0209535_10981613	3300025120	Marine	MFKRTKMYAAGGPVKGTKYMSKGGAAKGTKYMAKGGAAKGTKYMSKGGKV
Ga0209232_10514283	3300025132	Marine	MAKGGAMKGTKYMAKGGAMKGTKYMAKGGSMKGTKYMSKGGKV
Ga0209232_11625401	3300025132	Marine	MFKRTKGYAMGGAVKGRKYAAKGGAMKGSKYMSKGGAMKKSKYMAKGGKV
Ga0209232_12045551	3300025132	Marine	MFKRTKMYAMGGAVKGSKYMAKGGAMKKSKYMAKGGPMKKTKYM
Ga0208032_100173611	3300025266	Deep Ocean	MFKRTKGYAMGGPASKGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV
Ga0208814_100298811	3300025276	Deep Ocean	KGTKYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV
Ga0208814_10264664	3300025276	Deep Ocean	YNVLKEIIMFKRTKGYAMGGPASKGTKYMSKGGAAKGTKYIAKGGASMKGTKYMAKGGKA
Ga0208148_10244444	3300025508	Aqueous	MFKKTKGYATGGPVKGTKYMAKGGAAKGTKYMSKGGAAKGTKYMAKGGKV
Ga0208148_10574482	3300025508	Aqueous	MFKKTKGYSMGGSVKGTKYMSKGGAAKGTKYMSKGGAAKGTKYMAKGGKV
Ga0208643_10073518	3300025645	Aqueous	MYKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMSKGGAMKGTKYMSKGGKV
Ga0208899_10193592	3300025759	Aqueous	MFKRTKMYAAGGPVKGTKYKATGGAVMKGTKYKATGGAVMKGTKYKAKGGKV
Ga0208767_11962901	3300025769	Aqueous	MYAAGGPVKGTKYKATGGAVMKGAKYKATGGAVMKGTKYKAKGGKV
Ga0208785_10765883	3300025815	Aqueous	MFKKTKGYATGGPVKGTKYMAKGGAAKGTKYMAKGGAAKGTKYMAKGGKV
Ga0209555_101991031	3300025879	Marine	FKKTKGYSTGGPVKNTKYMAKGGAAQNTKPVKGTKYMAKGGAAQNTKPVKGTKYMSKGGK
Ga0209090_103431521	3300027813	Marine	MFKKTKGYANGGPVKGTKYMSKGGAMKGTKYKASGGPMKGTKYMAKGGKA
Ga0209503_100134507	3300027859	Marine	MFKRTKGYAMGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Ga0256382_10755311	3300028022	Seawater	MYKKTKGYASGGPVKGTKYMAKGGAAKGTKYMAKGGAMKGTKYMAKGGKR
Ga0256368_10060142	3300028125	Sea-Ice Brine	MFKKTKGYATGGPAKSTKYMSQGGAAKSTKYMAKGGAAQNTSPIKSTKYKAKGGKV
Ga0256368_10327811	3300028125	Sea-Ice Brine	MGGSVKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Ga0183755_100060431	3300029448	Marine	MFKKTKGYANGGAAKGTKYMAKGGASSSAKPKGTKYMAKGGAPGAMKGTKYMSKGGKV
Ga0308025_12782831	3300031143	Marine	KYMSKGGAAKGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV
Ga0307488_102745702	3300031519	Sackhole Brine	MGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Ga0307488_103113032	3300031519	Sackhole Brine	MFKKTKGYATGGPAKSTKYMSQGGAAKSTKYMAKGGAAQNTSPIKSTKYMAKGGKV
Ga0307489_100116981	3300031569	Sackhole Brine	MGGSVKSTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Ga0307376_104570832	3300031578	Soil	MFKKTKGYTMGGSVKGTKYMSKGGAMKGTKYMSKGGAMKGTKYMAKGGKV
Ga0308019_101154491	3300031598	Marine	TKYMSKGGASKGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV
Ga0302121_100071277	3300031626	Marine	MYKKTKGYANGGSVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKV
Ga0308001_103552021	3300031644	Marine	KGTKYMSKGGAAKGTKYMSKGGASMKGTKYMAKGGKV
Ga0315315_110645852	3300032073	Seawater	MKGTKSMANGGAMKKSKYMSKGGPMKNSKYMSKGGPMKNSKYMAKGGKV
Ga0314858_000328_5240_5392	3300033742	Sea-Ice Brine	MFKKTKGYASGGPVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKA
Ga0314858_002086_1_120	3300033742	Sea-Ice Brine	MKGTKYMAKGGAAMKGTKYMAKGGAAMKGTKYMSKGGKV
Ga0314858_014149_1509_1661	3300033742	Sea-Ice Brine	MFKKTKGYANGGPVKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMAKGGKA
Ga0314858_028128_471_623	3300033742	Sea-Ice Brine	MFKRTKGYASGGAVKGTKYMAKGGAMKGTKYMAKGGAMKGTKYMAKGGKS
Ga0314858_081780_652_804	3300033742	Sea-Ice Brine	MFKKTKGYAMGGSVKGTKYMSKGGAMKGTKYMAKGGAMKGTKYMAKGGKV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061975

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences