Metagenome Family F061963

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061963
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	48 residues
Representative Sequence	MPMRQLIVIGTVLLAAACGGPQAPPARPAAEPSAAVQLGGPPTGAGTSTA
Number of Associated Samples	104
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.47 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.95 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.779 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.214 % of family members)
Environment Ontology (ENVO)	Unclassified (35.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.832 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.51% β-sheet: 0.00% Coil/Unstructured: 79.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01464	SLT	6.87
PF00741	Gas_vesicle	1.53
PF08281	Sigma70_r4_2	1.53
PF06537	DHOR	1.53
PF00884	Sulfatase	1.53
PF12833	HTH_18	0.76
PF13557	Phenol_MetA_deg	0.76
PF07508	Recombinase	0.76
PF01988	VIT1	0.76
PF01139	RtcB	0.76
PF09865	DUF2092	0.76
PF13502	AsmA_2	0.76
PF00593	TonB_dep_Rec	0.76
PF13460	NAD_binding_10	0.76
PF00313	CSD	0.76
PF00625	Guanylate_kin	0.76
PF00011	HSP20	0.76
PF13376	OmdA	0.76
PF00232	Glyco_hydro_1	0.76
PF13426	PAS_9	0.76
PF04993	TfoX_N	0.76
PF01152	Bac_globin	0.76
PF12228	DUF3604	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	1.53
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0194	Guanylate kinase	Nucleotide transport and metabolism [F]	0.76
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.76
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.76
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.76
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.76
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.76
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	6.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.29 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	6.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	6.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	6.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	6.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.76 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	5.34 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Mycolicibacterium tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae	0.76 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.76 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	5.34 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Micromonospora sp. L5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. L5	0.76 %
Mycolicibacterium tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae	0.76 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10447434	Not Available	1138	Open in IMG/M
3300001305\|C688J14111_10270141	Not Available	536	Open in IMG/M
3300001686\|C688J18823_10576991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	718	Open in IMG/M
3300001686\|C688J18823_10983420	Not Available	535	Open in IMG/M
3300002128\|JGI24036J26619_10130273	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300004114\|Ga0062593_100276744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300004114\|Ga0062593_100531856	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300004157\|Ga0062590_102341401	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300004463\|Ga0063356_101614631	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300004480\|Ga0062592_101097134	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300004480\|Ga0062592_101462313	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300004643\|Ga0062591_102761154	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005093\|Ga0062594_101852977	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005280\|Ga0065696_1372520	Not Available	536	Open in IMG/M
3300005290\|Ga0065712_10226463	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300005295\|Ga0065707_10025578	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300005328\|Ga0070676_11282721	Not Available	559	Open in IMG/M
3300005330\|Ga0070690_101049344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	644	Open in IMG/M
3300005330\|Ga0070690_101782306	Not Available	502	Open in IMG/M
3300005336\|Ga0070680_101288618	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005343\|Ga0070687_100669915	Not Available	721	Open in IMG/M
3300005344\|Ga0070661_100481462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	991	Open in IMG/M
3300005347\|Ga0070668_100046868	All Organisms → cellular organisms → Bacteria	3322	Open in IMG/M
3300005353\|Ga0070669_100440294	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005354\|Ga0070675_100003971	All Organisms → cellular organisms → Bacteria	11216	Open in IMG/M
3300005365\|Ga0070688_100985377	Not Available	669	Open in IMG/M
3300005365\|Ga0070688_101545974	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005366\|Ga0070659_101084909	Not Available	705	Open in IMG/M
3300005441\|Ga0070700_100466485	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005441\|Ga0070700_100554723	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005444\|Ga0070694_100158859	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300005455\|Ga0070663_100302293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1281	Open in IMG/M
3300005459\|Ga0068867_101377809	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005459\|Ga0068867_101436692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae	641	Open in IMG/M
3300005466\|Ga0070685_10533152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300005549\|Ga0070704_100919735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	788	Open in IMG/M
3300005563\|Ga0068855_100564613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300005577\|Ga0068857_100408686	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005617\|Ga0068859_102294484	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005617\|Ga0068859_102315974	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006196\|Ga0075422_10048663	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300006196\|Ga0075422_10067692	Not Available	1324	Open in IMG/M
3300006237\|Ga0097621_100542193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300006845\|Ga0075421_100678448	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300006845\|Ga0075421_102620894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. L5	523	Open in IMG/M
3300006853\|Ga0075420_100015960	All Organisms → cellular organisms → Bacteria → Proteobacteria	6710	Open in IMG/M
3300006853\|Ga0075420_100237373	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300006871\|Ga0075434_100923170	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006881\|Ga0068865_100957021	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006954\|Ga0079219_11281368	Not Available	643	Open in IMG/M
3300006969\|Ga0075419_10441291	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300007076\|Ga0075435_100807868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300009094\|Ga0111539_12869011	Not Available	558	Open in IMG/M
3300009100\|Ga0075418_11379806	Not Available	764	Open in IMG/M
3300009148\|Ga0105243_10844379	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300009156\|Ga0111538_10913066	Not Available	1111	Open in IMG/M
3300009156\|Ga0111538_13804345	Not Available	522	Open in IMG/M
3300009174\|Ga0105241_12140680	Not Available	553	Open in IMG/M
3300009176\|Ga0105242_11913475	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009545\|Ga0105237_12182609	Not Available	563	Open in IMG/M
3300010036\|Ga0126305_11226396	Not Available	518	Open in IMG/M
3300010045\|Ga0126311_11742641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	527	Open in IMG/M
3300010375\|Ga0105239_13514474	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010401\|Ga0134121_11726806	Not Available	650	Open in IMG/M
3300011119\|Ga0105246_11889689	Not Available	573	Open in IMG/M
3300011441\|Ga0137452_1171402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	733	Open in IMG/M
3300011993\|Ga0120182_1001948	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012469\|Ga0150984_116722866	Not Available	525	Open in IMG/M
3300012892\|Ga0157294_10189231	Not Available	598	Open in IMG/M
3300012899\|Ga0157299_10179984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	621	Open in IMG/M
3300012957\|Ga0164303_11074960	Not Available	579	Open in IMG/M
3300012987\|Ga0164307_11244518	Not Available	619	Open in IMG/M
3300012988\|Ga0164306_11185649	Not Available	639	Open in IMG/M
3300014326\|Ga0157380_10435888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1254	Open in IMG/M
3300014326\|Ga0157380_11765062	Not Available	677	Open in IMG/M
3300014745\|Ga0157377_11376103	Not Available	555	Open in IMG/M
3300014874\|Ga0180084_1036991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	945	Open in IMG/M
3300015077\|Ga0173483_10320719	Not Available	766	Open in IMG/M
3300015201\|Ga0173478_10515989	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300015371\|Ga0132258_11139056	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300015371\|Ga0132258_12533654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300015371\|Ga0132258_13474034	Not Available	1080	Open in IMG/M
3300015371\|Ga0132258_13711192	Not Available	1042	Open in IMG/M
3300015372\|Ga0132256_102054977	Not Available	677	Open in IMG/M
3300015372\|Ga0132256_103058269	Not Available	562	Open in IMG/M
3300015373\|Ga0132257_104336786	Not Available	516	Open in IMG/M
3300015373\|Ga0132257_104383913	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300015374\|Ga0132255_100615048	Not Available	1607	Open in IMG/M
3300015374\|Ga0132255_103892676	Not Available	634	Open in IMG/M
3300019356\|Ga0173481_10098445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300019362\|Ga0173479_10094348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300022899\|Ga0247795_1028347	Not Available	913	Open in IMG/M
3300024055\|Ga0247794_10151723	Not Available	724	Open in IMG/M
3300025271\|Ga0207666_1038781	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300025899\|Ga0207642_11053495	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300025903\|Ga0207680_11375557	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025920\|Ga0207649_10429240	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300025933\|Ga0207706_11244363	Not Available	617	Open in IMG/M
3300025935\|Ga0207709_10675062	Not Available	825	Open in IMG/M
3300025935\|Ga0207709_11088107	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300025939\|Ga0207665_10247748	Not Available	1315	Open in IMG/M
3300025961\|Ga0207712_10141679	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300025986\|Ga0207658_10373550	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300025986\|Ga0207658_11581660	Not Available	599	Open in IMG/M
3300025986\|Ga0207658_11719837	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300026023\|Ga0207677_12168253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	517	Open in IMG/M
3300026035\|Ga0207703_12378346	Not Available	505	Open in IMG/M
3300026075\|Ga0207708_11530524	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	586	Open in IMG/M
3300026078\|Ga0207702_12309429	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300026116\|Ga0207674_10481349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300031226\|Ga0307497_10275956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	761	Open in IMG/M
3300031538\|Ga0310888_10518661	Not Available	715	Open in IMG/M
3300031716\|Ga0310813_11988054	Not Available	548	Open in IMG/M
3300031854\|Ga0310904_10877893	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300031854\|Ga0310904_10932058	Not Available	615	Open in IMG/M
3300031858\|Ga0310892_10425704	Not Available	870	Open in IMG/M
3300031892\|Ga0310893_10260374	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031908\|Ga0310900_11120554	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300031940\|Ga0310901_10085444	Not Available	1110	Open in IMG/M
3300031995\|Ga0307409_100880293	Not Available	908	Open in IMG/M
3300032003\|Ga0310897_10227754	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300032003\|Ga0310897_10517006	Not Available	581	Open in IMG/M
3300032012\|Ga0310902_10307372	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300032012\|Ga0310902_11139540	Not Available	547	Open in IMG/M
3300032013\|Ga0310906_10292659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300032013\|Ga0310906_10767560	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300032174\|Ga0307470_11906630	Not Available	506	Open in IMG/M
3300032179\|Ga0310889_10048890	Not Available	1644	Open in IMG/M
3300032211\|Ga0310896_10008431	Not Available	3211	Open in IMG/M
3300032211\|Ga0310896_10865403	Not Available	521	Open in IMG/M
3300032421\|Ga0310812_10504524	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.38%
Environmental	Environmental	49.62%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.38%
Terrestrial	Environmental → Terrestrial	48.09%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.56%
Sediment	Environmental → Aquatic → Sediment	1.53%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.85%
Loam	Environmental → Terrestrial → Soil → Loam	12.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.16%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.58%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_104474342	3300000550	Soil	MPMRQLIVIGTVLLAAACGGPQAPPARPAAEPSAAVQLGGPPTGAGTSTA
C688J14111_102701411	3300001305	Soil	MPVKQLIVIGTVLLAAACGSPQSTPGPQAPAATTAAEPSTAVQLGGPPT
C688J18823_105769912	3300001686	Soil	MFMRQLIVIGTVLLAAGCGGSQSPPGTPVATSSQAVQLGGPPTGAGTSTADT
C688J18823_109834201	3300001686	Soil	MKHLIVVATVLLAAACGGPQPPTSTPAAESSQAVQLGGPPSSAGT
JGI24036J26619_101302731	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MMSLRKLVVTGTVLFAAACGGPRSAPVPPAAEPSSQAVQLGGPPSGAGT
Ga0062593_1002767441	3300004114	Soil	MPVRQTIVIGALSVAAACGGSQSPPGPQAPPVATAERSAATQLGGP
Ga0062593_1005318561	3300004114	Soil	MRQLIVTGIVSLAAACGGPQPPPAKPAAEPSAAVQLGGPPTGAG
Ga0062590_1023414012	3300004157	Soil	MSMMNRLVIGAALLAAACGGPQSAPATPAANASPAVQLGGPPSG
Ga0063356_1016146312	3300004463	Arabidopsis Thaliana Rhizosphere	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGPPTDAGTLNAD
Ga0062592_1010971341	3300004480	Soil	MPMRQPIVIGTVLLAAACGGPKSTPGPQAPPATTTAEPSAAVQLGGPPTGAGTSTAD
Ga0062592_1014623131	3300004480	Soil	MRQLIVIGTVLLAAGCGGPQSTPGTPAGESSQAVQLGGPPSGAGTLNA
Ga0062591_1027611541	3300004643	Soil	MPMRQLIVIGTVVLAAGCGGAQSPSSAPAAESPQAVQLGGPPSGA
Ga0062594_1018529772	3300005093	Soil	MPMRQLIVIGTVVLAAGCGGAQSPSSAPAAESPQAVQLGGPPS
Ga0065696_13725201	3300005280	Switchgrass Rhizosphere Bulk Soil	MPMRRLIVIGTLLLAAACGGPASTPGPQAPPAPTAAEKSAAVQLGGPPTGAGTSNADTGE
Ga0065712_102264633	3300005290	Miscanthus Rhizosphere	MALRQVIVIGTVLLAACGGPPSTSQQHAPPATTAAAASAAVQLGGPPTGAGTTTA
Ga0065707_100255783	3300005295	Switchgrass Rhizosphere	MPMRQLVVIGTVLLGAACGSPQSTPAPQAPPATTAVQLGGPPTGAGTSTADS
Ga0070676_112827211	3300005328	Miscanthus Rhizosphere	MRQFIVIGTVLLAAACDSPQSTPGPQAPAATTAAGPSAAVQLGGPPSGAG
Ga0070690_1010493441	3300005330	Switchgrass Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLGGPPTGAGTS
Ga0070690_1017823061	3300005330	Switchgrass Rhizosphere	MRQLVIGTVFLAAACGGPNSTPGPQTPPATTGRETGAAVQLGGPPTGAGTS
Ga0070680_1012886181	3300005336	Corn Rhizosphere	MPMRQLIAIGAVLLSAACGGPQSPPAKPAAEPSAAVQLGGPPTGAGTSTADTGEI
Ga0070687_1006699152	3300005343	Switchgrass Rhizosphere	MRQLVIGTVLLAAACGGPQSPPAKPAADATPAVQLGGPPSSAGTATADSGEI
Ga0070661_1004814623	3300005344	Corn Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLGG
Ga0070668_1000468684	3300005347	Switchgrass Rhizosphere	MPMRQFIVIGTVLLAAACDSPQSTPGPQAPAATTAAGPSAAVQLGGPP
Ga0070669_1004402943	3300005353	Switchgrass Rhizosphere	MPMRQLIVIGTVVLAAGCGGAQSPSSAPAAESPQAVQLGGP
Ga0070675_10000397113	3300005354	Miscanthus Rhizosphere	MRRLLVCGTVWLAAACGGPQPPQGTPATEPSAAVQLGGPPSGAGSASADAGEI
Ga0070688_1009853771	3300005365	Switchgrass Rhizosphere	MRQLVIGTVFLAAACGGPNSTPGPQTPPATTGRETGAAVQLGGPPTGAGTST
Ga0070688_1015459741	3300005365	Switchgrass Rhizosphere	MRPLVLFATILLAAACGGPQSPPARPAAEPPAAVQLGGPPTGAGTSTAD
Ga0070659_1010849092	3300005366	Corn Rhizosphere	MPMRQVIVIGTVLLAAACGGPQSTPGPQAPAAKPAAEPSAAVQLGG
Ga0070700_1004664853	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LAVRPLTVIGFVLLGAACGGPQPPPGKPAAAPSAAVQLGGPPTGAG
Ga0070700_1005547231	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPMRQLIVIGTVLLAAGCGGAQSPSSTPAAESPQAVQLGGPPSGAGT
Ga0070694_1001588591	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRQFIVIGTVLLAAACDSPQSTPGPQAPAATTAAGPSAAVQLGGPP
Ga0070663_1003022931	3300005455	Corn Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLGGPPTGTGTTTADTGEIK
Ga0068867_1013778091	3300005459	Miscanthus Rhizosphere	MPVRQLIMIGTVLLAAGCGGSQSPSGTPAAESSPAVQLGGPPSGAGTLNADGGEI
Ga0068867_1014366921	3300005459	Miscanthus Rhizosphere	MRQLVIGTMFLAAACGGSQSPPGPQAPPATTATQPAAAVQLGGPP
Ga0070685_105331522	3300005466	Switchgrass Rhizosphere	MRQLVVIGTVLLTAACGGPQAPPAGPAAEPSAAVQLGGPPTGTGTSTADAGEITPADPTT
Ga0070704_1009197352	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPMRQLVVIGTVVLAAACGGPQSSPAQPAAEPPPAVQLGGPPTGAGTSTAD
Ga0068855_1005646132	3300005563	Corn Rhizosphere	MPVRQTIVIGTLWVAAACGGSPSPPGPQAPQATGVAEPSAAVQLGGPPTGA
Ga0068857_1004086861	3300005577	Corn Rhizosphere	MPMRQLIVIGTVLLTAACGGPQPPVAKPAAEPSAAVQLGGPPTG
Ga0068859_1022944841	3300005617	Switchgrass Rhizosphere	MPMRQLILFGTVLLVAGCGGPQPAPAKPAAEPSAALQLGGPPTGAGTS
Ga0068859_1023159742	3300005617	Switchgrass Rhizosphere	MPLRQLIVIGTVSLAAACGGPPAPPAQPAAAPSAAVQL
Ga0075422_100486631	3300006196	Populus Rhizosphere	MRQLVVVATILVVTACGGPRSSPPAPAAEPSAAVQLGGPPTGAGTTTADTGEIQ
Ga0075422_100676921	3300006196	Populus Rhizosphere	MRQLVIGTVLLAAACGGPQSPPAKPAADATPAVQLGGPPSSAGTAT
Ga0097621_1005421932	3300006237	Miscanthus Rhizosphere	MRQLLVCGAGLLLAAACGGSQPPQGTPAAEPSAAVQLGGPPSGAG
Ga0075421_1006784481	3300006845	Populus Rhizosphere	MPMRQLIVIGTVLFAAACGSPQSTPGTQAPPATTAAEPSAAVQLGGPPTGAGT
Ga0075421_1026208941	3300006845	Populus Rhizosphere	MRQLVIGTVFLAAACGGPTSTPEPQTPQATTGAEPAAAVQLGGPPTGAGTSTADTGEI
Ga0075420_1000159601	3300006853	Populus Rhizosphere	MKRLRLIVIGTVLLAAACGGPESTPGPQAPSAKPASEPSAAVQLGGPPTDAGT
Ga0075420_1002373732	3300006853	Populus Rhizosphere	MPMRQLIVIGTVLFAAACGSPQSTPGTQAPPATTAAEPSAAVQLGGPPTGAGTT
Ga0075434_1009231701	3300006871	Populus Rhizosphere	MPMRPLIVIGTLLLGAACGGPQPPPAKPAAEPSAAVQLGGPPTGAGTSTADTGEIKPA
Ga0068865_1009570211	3300006881	Miscanthus Rhizosphere	MPMRQLVVIGTVVLAAACGGPQSSPAKPAAEPPPAVQLGGPPSSAGTVTADS
Ga0079219_112813683	3300006954	Agricultural Soil	MRQLVIATVLLAAACGSPQSTPGTQAPRATTAAEPSAAVQLGGPPTGAGTST
Ga0075419_104412912	3300006969	Populus Rhizosphere	MPIRQLIVIGTVLLAAACGGPQPPPAKPAAVPSAAVQLGGPPAGAGTSTADTG
Ga0075435_1008078681	3300007076	Populus Rhizosphere	MPMRPLIVIGTLLLGAACGGPQPPPAKPAAEPSAA
Ga0111539_128690111	3300009094	Populus Rhizosphere	MKRLRLIVIGTVLLAAACGGPESTPGPQAPSAKPASEPSAAVQL
Ga0075418_113798061	3300009100	Populus Rhizosphere	MPMKQLIVIGTVVLAAACGSPQSTPGPQAPPATTTAEPSAAVQLGGPPTGAGTS
Ga0105243_108443792	3300009148	Miscanthus Rhizosphere	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGPPTDAGTLSA
Ga0111538_109130663	3300009156	Populus Rhizosphere	MPMRQLIVIGTVLLTAACGGPQSPPAAQAPPAVQLGGPPSNAGTLTADSGDIQPA
Ga0111538_138043452	3300009156	Populus Rhizosphere	MRQLIVIGTVLLTAGCGGPQSTPGTPAGESSQAVQLGGPPSGAGTLNADGGEI
Ga0105241_121406802	3300009174	Corn Rhizosphere	MPMRQLIVIGAVLLSAACGGPQSPPAKPAAEPSAAVQLGGPP
Ga0105242_119134751	3300009176	Miscanthus Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPSAAVQLGGPPTAAGTSTAD
Ga0105237_121826091	3300009545	Corn Rhizosphere	MPMRPLIVIGTLLLGAACGGPQPPPAKPAAEPSAAVQLGGPPTGAGTS
Ga0126305_112263961	3300010036	Serpentine Soil	MRQLVLIGTVLLAAACGGSQPTPAPQAPASTTAAEPSAAIQLGGPPTGA
Ga0126311_117426411	3300010045	Serpentine Soil	MRQLIVIGTVLFAAACGGPPSTPGPQAPAATPAAEPSAAVQLGGPPTGAGTSTADTG
Ga0105239_135144741	3300010375	Corn Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLG
Ga0134121_117268062	3300010401	Terrestrial Soil	MPMRQLIVIGTVLLAAACGGPQPPPSKPAAESSQAVQLGGPPSSAGTSTADTGE
Ga0105246_118896891	3300011119	Miscanthus Rhizosphere	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGP
Ga0137452_11714021	3300011441	Soil	MRPLIVIGTVLLAAACGGPQAPPATPAAEPSAAVQLGGPP
Ga0120182_10019481	3300011993	Terrestrial	MPMRQLIVIGTVLFAAACGSPQSTPGTQAPPATTAAEPSA
Ga0150984_1167228662	3300012469	Avena Fatua Rhizosphere	MPMRPLIVIGTVLLAASCGGPKSTPGPQAPPATTTAEPSAAKQLGGPPSGAGTSTADTGDIE
Ga0157294_101892311	3300012892	Soil	MKQLVVIGTVLLAAACGDPQSTPPGSQAPPVTEPSAAVQLGGPGSGTGTARADV
Ga0157299_101799843	3300012899	Soil	MRQLVVVATILITTACGGTQSPPATPAAEAPPVVQLGAPPSSAGTVTADSG
Ga0164303_110749602	3300012957	Soil	MPMRLIVIGTVLLATACGGPQSLPGTPAAESSQAIQLGGPPSGAGTL
Ga0164307_112445182	3300012987	Soil	MFVGERHEESAMPMRQLIVMGTVLLAAACGGPKSTSEPQAPPATTAAEPSAAAQLGGPPT
Ga0164306_111856492	3300012988	Soil	MFVGERHEESAMPMRQLIVMGTVLLAAACGGPKSTSEPQAPPATTAAEPSAAA
Ga0157380_104358881	3300014326	Switchgrass Rhizosphere	MPMRQLVVIGIVLLATGCGGPQSSPPTPAAESSPAVQLGGPPTDA
Ga0157380_117650622	3300014326	Switchgrass Rhizosphere	MRQLVIGTVLFAAACGSPTSTPSTQAPPAPATSSAVQLGGPPTGAGTATA
Ga0157377_113761031	3300014745	Miscanthus Rhizosphere	MPVRQLIGIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGPP
Ga0180084_10369912	3300014874	Soil	MPMRQLIVIGTVLLAAGCGGPQSPPGTPAAESSQAVQLGGPPSGAGTVNADGGEIQPAD
Ga0173483_103207192	3300015077	Soil	MPMRQLILIGTALLAAGCGGAQSPPSTPAAESPQAV
Ga0173478_105159891	3300015201	Soil	MPVRPLIVIGTVLLVAGCGGPQSTPGAPASESSQVVQLGGPPSGAGTLNA
Ga0132258_111390561	3300015371	Arabidopsis Rhizosphere	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQ
Ga0132258_125336541	3300015371	Arabidopsis Rhizosphere	MRQFIVIGTVLLAAACGSPQSTPGPQTPAARPAAEPSAAVQLGGPPTGAGTSTADTGE
Ga0132258_134740342	3300015371	Arabidopsis Rhizosphere	MPMRQLIVIATVLVAAACGGPQSPPAKPAAEAPPAVQLGGPPSNAGTV
Ga0132258_137111922	3300015371	Arabidopsis Rhizosphere	MPMRQLIAIGTVLLAAACGSPTSTPGPQAPPATTAAER
Ga0132256_1020549772	3300015372	Arabidopsis Rhizosphere	MPMRQLIVIGTVLFAAACGSPQSTPGTQTRAPTTAAEPSAAVQLGGPPTGAGTSTA
Ga0132256_1030582691	3300015372	Arabidopsis Rhizosphere	MRQLVIGTVLLAAACGSPESTPGTSAPPATTAAEPSAAVQLGGPPTGAGTST
Ga0132257_1043367861	3300015373	Arabidopsis Rhizosphere	MAMRQVIVIGTVLLAACGSPQSTPGPQAPAAKPAAEPSA
Ga0132257_1043839131	3300015373	Arabidopsis Rhizosphere	MRQRIVIAAVLLSPACGGPQSPAKPAAEAPPAVQLGGPPSNAGTVTAD
Ga0132255_1006150481	3300015374	Arabidopsis Rhizosphere	MRQLIVIGTVLFAAACGSPQSTPGTQPAPAAEPSATVQLGGPPTGAGTTTADTGEI
Ga0132255_1038926761	3300015374	Arabidopsis Rhizosphere	MRQLVIGTVFLAAACGSPQSTPGTQAPAATTAAAPSAVEQLGGPPTGAGTS
Ga0173481_100984451	3300019356	Soil	MALRQVIVIGTVLLAACGGPPSTSQQHAPPATTAAAASAA
Ga0173479_100943482	3300019362	Soil	MMSLRKLVVTGTVLFAAACGGPRSAPVPPAAEPSSQAVQL
Ga0247795_10283472	3300022899	Soil	MRQLVIGTVLLAAACGGPQSPPAKPAADATPAVQLGGPPSSAGTATADSGEIQ
Ga0247794_101517231	3300024055	Soil	VGDGEEGVMPLRQLIVIGTLSLAAACGGAQSPPAKPATEPPAAVQLGGPPT
Ga0207666_10387812	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAA
Ga0207642_110534951	3300025899	Miscanthus Rhizosphere	MPMRPLIVIATVLFAAACGSPQSTPGTQAPPPAPAAEPSAAVQLGGPPTGAGTSTAD
Ga0207680_113755571	3300025903	Switchgrass Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLGGPP
Ga0207649_104292401	3300025920	Corn Rhizosphere	MPVRQRIVIGAVLLSASCGGPQSPPAKPAAEPPAAVQLGGP
Ga0207706_112443631	3300025933	Corn Rhizosphere	MPMRPLIVIGTLLLGAACGGPQPPPAKPAAEPSAAVQLGGPPTGAGTSTADTGEI
Ga0207709_106750621	3300025935	Miscanthus Rhizosphere	MPMRQFIVIGTVLLAAACDSPQSTPGPQAPAATTAAGPS
Ga0207709_110881072	3300025935	Miscanthus Rhizosphere	MPMRQLIVIGTVLLAAGCGGAQSPSSTPAAESPQAVQ
Ga0207665_102477481	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPMRQLIVIGTVLFAAACGGPNSTPGPQAPPAKPAAEPAAAVQLGGPPTGAGTST
Ga0207712_101416793	3300025961	Switchgrass Rhizosphere	MRQLVIGTVLLAAACGGPQSPPAKPAADATPAVQLGGPPS
Ga0207658_103735501	3300025986	Switchgrass Rhizosphere	MMSLRKLVVTGTVLFAAACGGPRSAPVPPAAEPSSQAVQLGGPPSGA
Ga0207658_115816601	3300025986	Switchgrass Rhizosphere	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQL
Ga0207658_117198371	3300025986	Switchgrass Rhizosphere	MPMRQLILFGTVLLVAGCGGSQPAPAKPAAEPSAALQL
Ga0207677_121682531	3300026023	Miscanthus Rhizosphere	MRQLVVVATILITTACGGTQSPPATPAAEAPPVVQLGAPPSSAGTVTADSGDI
Ga0207703_123783461	3300026035	Switchgrass Rhizosphere	MGALLVAAACGGSPSPPRPQAPAATTAAEPPAAVQLGGPPTGA
Ga0207708_115305241	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRQLVVVAAILLATACGGPQSSPPTPAAEPSTAVQLGGPPTGAGTTTA
Ga0207702_123094292	3300026078	Corn Rhizosphere	MMSLRKLVVTGTVLFAAACGGPRSAPVPPAAEPSSQAVQLGGPPSGAGTL
Ga0207674_104813494	3300026116	Corn Rhizosphere	MPMRQLVVIGIVLLATGCGGPQSSPPTPAAESSPAVQLGGPPTDSGTLSA
Ga0307497_102759562	3300031226	Soil	MPMRQLIVIGTVLLAAACGNPQSTPGPPAPLPTTAAEPSAAVQ
Ga0310888_105186612	3300031538	Soil	MPMKQLIVIGTVVLAAACGSPQSTPGPQAPSATTAAEPSAAVQLGGPATG
Ga0310813_119880542	3300031716	Soil	MPMRQLIVIGAVLLSAACGGPQSPPAKPAAEPSAAVQLGGPPTGAGTSTADT
Ga0310904_108778931	3300031854	Soil	MPMRPLIVIATVLFAAACGSPQSTPGTQTPPATTAAEPS
Ga0310904_109320581	3300031854	Soil	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGPPS
Ga0310892_104257042	3300031858	Soil	MPMRQLVVIGIVLLAAGCGGPQSPPGTPVADSSEAVQLGGPPTDA
Ga0310893_102603741	3300031892	Soil	MPMRQLIVIATVLFAAACGSPQSTPGTQTPPATTAAEPSAAVQLGG
Ga0310900_111205541	3300031908	Soil	MPMRKLIVIGTVLAAAACGQPQSTPANTATEPPAAVQLGGP
Ga0310901_100854442	3300031940	Soil	MPMRQLILIGTALLAAGCGGAQSPPSTPAAESPQAVQLGGPPSGAGTVTADSG
Ga0307409_1008802931	3300031995	Rhizosphere	MRQVIVIGTVLLAVACGRSPAPPGTPAAEPTQAVQLGGP
Ga0310897_102277541	3300032003	Soil	MPVRQIILIATLSVAAACGGPQSTPGTQAPPATPAAAPSA
Ga0310897_105170062	3300032003	Soil	MRQLIVIGTVLLTAGCGGPQSTPGTPAGESSQAVQLGGPPSGAGTLNADGG
Ga0310902_103073721	3300032012	Soil	MPMRQLILFGTVLLVAACGGPQPAPAKPAAEPSAALQL
Ga0310902_111395401	3300032012	Soil	MPVRQIILIATLSVAAACGGPQSTPGTQAPPATPPAAPSAAVQLGGPPTGAGTSTADSGEIKPA
Ga0310906_102926592	3300032013	Soil	MALRQVIVIGTVLLAACGGPPSTSQQQAPPATTAPAASAAVQLGGPPTGA
Ga0310906_107675601	3300032013	Soil	MPMRQLIVIGTVLFAAGCGSPQSTPGTQAPPATAAAEPSAAVQLGGPPTGAG
Ga0307470_119066301	3300032174	Hardwood Forest Soil	MPVRQLIVIGTVLLAAGCGQPQPPGGTPATASSQAVQLGGPPTDA
Ga0310889_100488902	3300032179	Soil	MPMRQLILFGTVLLVAACGGPQPAPAKPAAEPSAALQLGGPPTGAGTSTADTGEIQ
Ga0310896_100084314	3300032211	Soil	MPMRQLILIGTALLAAGCGGAQSPPSTPAAESPQAVQLGGPPSGAGTVT
Ga0310896_108654031	3300032211	Soil	MPVRQIILIATLSVAAACGGPQSTPGTQAPPATPAAAPSAAVQLGGPPTGAGT
Ga0310812_105045241	3300032421	Soil	MRMRQLTVIGTVLIAAACGGSQRPPPKPAAEPSATVQLGGPPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061963

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences