Metagenome Family F061946

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061946
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	69 residues
Representative Sequence	VTSNTITIRLRRPKAEIEASAKPNVNAWVNKLIEHALGPRPVDWNEHFDRPSSGRKFRCTGKVERRER
Number of Associated Samples	110
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.15 %
% of genes near scaffold ends (potentially truncated)	32.82 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (23.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.21% β-sheet: 0.00% Coil/Unstructured: 69.79%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01850	PIN	25.19
PF06013	WXG100	2.29
PF04545	Sigma70_r4	2.29
PF07963	N_methyl	1.53
PF01026	TatD_DNase	0.76
PF00817	IMS	0.76
PF01136	Peptidase_U32	0.76
PF01408	GFO_IDH_MocA	0.76
PF10503	Esterase_PHB	0.76
PF07587	PSD1	0.76
PF07676	PD40	0.76
PF11903	ParD_like	0.76
PF01345	DUF11	0.76
PF02082	Rrf2	0.76
PF02574	S-methyl_trans	0.76
PF00932	LTD	0.76
PF10442	FIST_C	0.76
PF01985	CRS1_YhbY	0.76
PF04313	HSDR_N	0.76
PF02866	Ldh_1_C	0.76
PF01740	STAS	0.76
PF00848	Ring_hydroxyl_A	0.76
PF00854	PTR2	0.76
PF06831	H2TH	0.76
PF16363	GDP_Man_Dehyd	0.76
PF00899	ThiF	0.76
PF12029	DUF3516	0.76
PF08532	Glyco_hydro_42M	0.76
PF01041	DegT_DnrJ_EryC1	0.76
PF12694	cpYpsA	0.76
PF00581	Rhodanese	0.76
PF01145	Band_7	0.76
PF04993	TfoX_N	0.76
PF00582	Usp	0.76
PF00072	Response_reg	0.76
PF02585	PIG-L	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4842	Secreted virulence factor YukE/EsxA, WXG100 family	Defense mechanisms [V]	2.29
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.53
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.76
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	0.76
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.76
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.76
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.76
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.76
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.76
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.76
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.76
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.76
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.76
COG1534	RNA-binding protein YhbY	Translation, ribosomal structure and biogenesis [J]	0.76
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.76
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.76
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	0.76
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.76
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.76
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.67 %
Unclassified	root	N/A	30.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	51.15 %
Unclassified	root	N/A	30.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.34 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.53 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.82 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.76 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.05 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Syntrophotaleaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.05 %
Syntrophotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea	0.76 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.76 %
Prosthecobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3.05 %
Syntrophotalea acetylenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	0.76 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.76 %
Prosthecobacter vanneervenii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.76 %
Syntrophotalea acetylenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	0.76 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.76 %
Prosthecobacter vanneervenii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16764877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	15384	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101271775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101713049	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300001213\|JGIcombinedJ13530_102911239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	950	Open in IMG/M
3300001213\|JGIcombinedJ13530_106583934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	913	Open in IMG/M
3300001213\|JGIcombinedJ13530_109370446	Not Available	515	Open in IMG/M
3300001356\|JGI12269J14319_10087065	Not Available	1613	Open in IMG/M
3300004114\|Ga0062593_102724045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300005166\|Ga0066674_10352981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	690	Open in IMG/M
3300005180\|Ga0066685_10260990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1196	Open in IMG/M
3300005186\|Ga0066676_10172887	Not Available	1373	Open in IMG/M
3300005330\|Ga0070690_101060152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	641	Open in IMG/M
3300005340\|Ga0070689_100360981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1221	Open in IMG/M
3300005552\|Ga0066701_10755782	Not Available	581	Open in IMG/M
3300005557\|Ga0066704_10148262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1572	Open in IMG/M
3300005576\|Ga0066708_10361732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300005598\|Ga0066706_10135375	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300005598\|Ga0066706_10697032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	807	Open in IMG/M
3300005764\|Ga0066903_107926481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300005836\|Ga0074470_10605537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2022	Open in IMG/M
3300006046\|Ga0066652_100551800	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1079	Open in IMG/M
3300006224\|Ga0079037_101035193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	813	Open in IMG/M
3300006796\|Ga0066665_10201438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	1545	Open in IMG/M
3300006797\|Ga0066659_10095813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2006	Open in IMG/M
3300006800\|Ga0066660_10640399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	883	Open in IMG/M
3300007255\|Ga0099791_10387704	Not Available	672	Open in IMG/M
3300009012\|Ga0066710_100065380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4626	Open in IMG/M
3300009012\|Ga0066710_100091579	All Organisms → cellular organisms → Bacteria	4022	Open in IMG/M
3300009012\|Ga0066710_102697483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300009038\|Ga0099829_11342350	Not Available	591	Open in IMG/M
3300009091\|Ga0102851_11235859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	823	Open in IMG/M
3300009091\|Ga0102851_11631350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	723	Open in IMG/M
3300009093\|Ga0105240_10657664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1148	Open in IMG/M
3300009094\|Ga0111539_12147823	All Organisms → cellular organisms → Bacteria → PVC group	648	Open in IMG/M
3300009137\|Ga0066709_100108625	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300009137\|Ga0066709_101548243	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300009137\|Ga0066709_101654155	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009137\|Ga0066709_102275039	Not Available	744	Open in IMG/M
3300009167\|Ga0113563_11739455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	740	Open in IMG/M
3300009175\|Ga0073936_10184340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1506	Open in IMG/M
3300009176\|Ga0105242_12141999	Not Available	604	Open in IMG/M
3300009504\|Ga0114946_10073797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1926	Open in IMG/M
3300009504\|Ga0114946_10692566	Not Available	511	Open in IMG/M
3300009545\|Ga0105237_11599548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300009548\|Ga0116107_1055080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	1332	Open in IMG/M
3300009621\|Ga0116116_1172330	Not Available	562	Open in IMG/M
3300009630\|Ga0116114_1159667	Not Available	573	Open in IMG/M
3300009839\|Ga0116223_10346518	Not Available	880	Open in IMG/M
3300010304\|Ga0134088_10531930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300010304\|Ga0134088_10643444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300010323\|Ga0134086_10138766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	881	Open in IMG/M
3300010391\|Ga0136847_11942513	Not Available	579	Open in IMG/M
3300010397\|Ga0134124_10091765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2628	Open in IMG/M
3300010399\|Ga0134127_12205529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	630	Open in IMG/M
3300010403\|Ga0134123_11661619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	688	Open in IMG/M
3300012096\|Ga0137389_10728910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300012201\|Ga0137365_10445886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	953	Open in IMG/M
3300012201\|Ga0137365_10541189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300012204\|Ga0137374_10835057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	681	Open in IMG/M
3300012207\|Ga0137381_11018396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300012210\|Ga0137378_10800504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300012212\|Ga0150985_112017429	Not Available	700	Open in IMG/M
3300012350\|Ga0137372_10813716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	669	Open in IMG/M
3300012353\|Ga0137367_11109827	Not Available	534	Open in IMG/M
3300012356\|Ga0137371_10076146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2601	Open in IMG/M
3300012469\|Ga0150984_116401394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	755	Open in IMG/M
3300012469\|Ga0150984_121739147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300012532\|Ga0137373_11250561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	521	Open in IMG/M
3300012582\|Ga0137358_10428837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	893	Open in IMG/M
3300012917\|Ga0137395_10563600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	822	Open in IMG/M
3300012918\|Ga0137396_10842836	Not Available	673	Open in IMG/M
3300012922\|Ga0137394_10951046	Not Available	715	Open in IMG/M
3300012923\|Ga0137359_10895652	Not Available	765	Open in IMG/M
3300012925\|Ga0137419_11817666	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300014162\|Ga0181538_10555368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300014498\|Ga0182019_10259190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1146	Open in IMG/M
3300014502\|Ga0182021_11538602	Not Available	801	Open in IMG/M
3300014502\|Ga0182021_11901895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300014839\|Ga0182027_10380501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1574	Open in IMG/M
3300014839\|Ga0182027_10930148	Not Available	897	Open in IMG/M
3300016404\|Ga0182037_12142723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300017659\|Ga0134083_10298237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	683	Open in IMG/M
3300017935\|Ga0187848_10341629	Not Available	621	Open in IMG/M
3300017961\|Ga0187778_10991775	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300018004\|Ga0187865_1012887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4388	Open in IMG/M
3300018018\|Ga0187886_1057492	Not Available	1764	Open in IMG/M
3300018020\|Ga0187861_10218112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300018021\|Ga0187882_1236359	Not Available	710	Open in IMG/M
3300018024\|Ga0187881_10043274	Not Available	2235	Open in IMG/M
3300018024\|Ga0187881_10055082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1916	Open in IMG/M
3300018040\|Ga0187862_10634773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	629	Open in IMG/M
3300019487\|Ga0187893_10089441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2782	Open in IMG/M
3300020000\|Ga0193692_1017120	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300021072\|Ga0194057_10221468	Not Available	662	Open in IMG/M
3300021168\|Ga0210406_10700708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	780	Open in IMG/M
3300021602\|Ga0194060_10039538	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300022555\|Ga0212088_10024566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7760	Open in IMG/M
3300024331\|Ga0247668_1005234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2781	Open in IMG/M
3300025444\|Ga0208189_1082486	Not Available	574	Open in IMG/M
3300026324\|Ga0209470_1148317	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027815\|Ga0209726_10152583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1286	Open in IMG/M
3300027854\|Ga0209517_10043341	Not Available	3513	Open in IMG/M
3300027905\|Ga0209415_10273894	Not Available	1488	Open in IMG/M
3300028798\|Ga0302222_10180318	Not Available	829	Open in IMG/M
3300029442\|Ga0239579_1038760	Not Available	750	Open in IMG/M
3300029943\|Ga0311340_10692805	Not Available	875	Open in IMG/M
3300030520\|Ga0311372_12680280	Not Available	553	Open in IMG/M
3300031231\|Ga0170824_121092274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	595	Open in IMG/M
3300031234\|Ga0302325_10075807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6466	Open in IMG/M
3300031999\|Ga0315274_10019264	All Organisms → cellular organisms → Bacteria	9584	Open in IMG/M
3300032069\|Ga0315282_10076573	All Organisms → cellular organisms → Bacteria	3222	Open in IMG/M
3300032143\|Ga0315292_11305506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	594	Open in IMG/M
3300032156\|Ga0315295_11281645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	715	Open in IMG/M
3300032156\|Ga0315295_11437824	Not Available	667	Open in IMG/M
3300032164\|Ga0315283_11516305	Not Available	686	Open in IMG/M
3300032173\|Ga0315268_10001569	All Organisms → cellular organisms → Bacteria	26302	Open in IMG/M
3300032342\|Ga0315286_10427862	Not Available	1388	Open in IMG/M
3300032397\|Ga0315287_11395766	Not Available	797	Open in IMG/M
3300032397\|Ga0315287_12325520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300032401\|Ga0315275_11039036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300032516\|Ga0315273_13183014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300032770\|Ga0335085_11702942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	649	Open in IMG/M
3300032954\|Ga0335083_10479206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1046	Open in IMG/M
3300033405\|Ga0326727_10001188	All Organisms → cellular organisms → Bacteria	99115	Open in IMG/M
3300033405\|Ga0326727_10023378	All Organisms → cellular organisms → Bacteria	11798	Open in IMG/M
3300033416\|Ga0316622_100384006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1573	Open in IMG/M
3300033416\|Ga0316622_102628912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300033480\|Ga0316620_11972610	Not Available	580	Open in IMG/M
3300033482\|Ga0316627_101807160	Not Available	629	Open in IMG/M
3300033521\|Ga0316616_102728278	Not Available	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.66%
Host-Associated	Host-Associated	5.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.60%
Aquatic	Environmental → Aquatic	32.06%
Plants	Host-Associated → Plants	5.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.25%
Freshwater	Environmental → Aquatic → Freshwater	29.01%
Peat	Environmental → Terrestrial → Peat	4.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.58%
Marine	Environmental → Aquatic → Marine	2.29%
Sediment	Environmental → Aquatic → Sediment	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.27%
Lake	Environmental → Aquatic → Freshwater → Lake	13.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.58%
Loam	Environmental → Terrestrial → Soil → Loam	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.34%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.05%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.05%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.05%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.05%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.53%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.53%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.53%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029442	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM13	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02945190	2088090014	Soil	LRRPKAEIEAKAKPNVNAWINKLIEQALGPRETDWNEHFNRVPARKFRYKSDEVRRAER
INPhiseqgaiiFebDRAFT_1012717751	3300000364	Soil	IRLRRPKAEIEAKAKPNVNAWINKLIEQALGPRETDWNEHFNRVPARKFRYKSDEVRRAER*
INPhiseqgaiiFebDRAFT_1017130492	3300000364	Soil	MCYMKSMTSETITIRLRRPKAEIEARARPNVNAWINKLIEQALGPRDVDWNEHFDREPSRKFRYKSDEIRRANR*
JGIcombinedJ13530_1029112392	3300001213	Wetland	VTSNTITIRLRRSKAEIEACAKPNVNAWVNSLIERALGPPKVDWNEHFDRPSSGRKYRLTGKVERHER*
JGIcombinedJ13530_1065839341	3300001213	Wetland	FLAQEGLALPRGLWYTLCVTSNTITVRLRRPKAEIEANARPNVNAWVNQLIEQALGPRKADWREHFDRRSPGRRFRCTGKVERRER*
JGIcombinedJ13530_1093704461	3300001213	Wetland	MNCVTSSTITVRLRRPKAEIEAKAKPNVNAWINKLIEQALGPRTVDWNEHFDGPSLRRQFRCTGKVERQER*
JGI12269J14319_100870652	3300001356	Peatlands Soil	MNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER*
Ga0062593_1027240452	3300004114	Soil	VWYSSCVTSNTITIRLRRPKAELEAKAKPNVNAWVNNLIEQALGPRAADWNEHFDRASSGRKFFCTGKTERRER*
Ga0066674_103529812	3300005166	Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0066685_102609902	3300005180	Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSKQRRFRYRASELRRGER*
Ga0066676_101728872	3300005186	Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070690_1010601521	3300005330	Switchgrass Rhizosphere	RCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070689_1003609811	3300005340	Switchgrass Rhizosphere	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070685_115781682	3300005466	Switchgrass Rhizosphere	KPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066701_107557822	3300005552	Soil	VTSNTITVRLRRPKAEIQDKARPNVNAWVNKLIEHALGPRKVDWNEHFDRPPSERKFRLTGKVERRER*
Ga0066704_101482621	3300005557	Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066708_103617321	3300005576	Soil	MTSNMITIRLRRPKAEVVARAKPNVNAWINKLIEQALGPREVDWNEHFDRPSSGRKFRYS
Ga0066706_101353752	3300005598	Soil	MGRETFCASRESVLQRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066706_106970323	3300005598	Soil	VTSNTITIRLRRPKAEVEAYAKPNVNAWVNKLIEHALGPRKVDWNEHFDQPSSGRKFRCTGKVERRER*
Ga0066903_1079264811	3300005764	Tropical Forest Soil	TSNTITIRLRRPKAEVEAVARPNVNAWVNQLIEQALGPRKADWHEHFDRRSSGRRFRCTGKVERRER*
Ga0074470_106055373	3300005836	Sediment (Intertidal)	VTLNTITIRLRRPKAEIEANAKPNVNAWVNHLIEQALGPRRADWHEHFDRPSSGRRFRCTGKVERRER*
Ga0066652_1005518002	3300006046	Soil	VTSNTITIRLRRPKAEIEAAAKPNINAWVNKLIERALGPRPVDWGEHFDRKSRQRRFRYRASEMRRGER*
Ga0079037_1010351932	3300006224	Freshwater Wetlands	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYC
Ga0066665_102014383	3300006796	Soil	CVTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0066659_100958131	3300006797	Soil	PGKVCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066660_106403992	3300006800	Soil	VKSNTITIRLRRPKAEIEANAKPNVNAWVNKLIERALGPREVDWNEHFDRRSSGRKFHLSGKVERRES*
Ga0099791_103877041	3300007255	Vadose Zone Soil	MTSNTITIRLRRPKAEIEAKARPNVNAWINKLIEQALGPRSADWNEHFDRAPRRKFRYKSDEVRRAER*
Ga0066710_1000653802	3300009012	Grasslands Soil	MLCCIARIQWYKCCMTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRRQR
Ga0066710_1000915794	3300009012	Grasslands Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSKQRRFRYRASELRRGER
Ga0066710_1026974832	3300009012	Grasslands Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRTVDWNEHFNRKSRQRRF
Ga0099829_113423502	3300009038	Vadose Zone Soil	MTSERITIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPQSVDWNEHFDRPSSGRKFRYR
Ga0102851_112358592	3300009091	Freshwater Wetlands	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIERALAPPTVDWKEHFERKSQSRRFHYLSDEVRAQQRR*
Ga0102851_116313502	3300009091	Freshwater Wetlands	IRLRRPKAIIEAVAKPNVNAWVNELIERALAPKPVDWKEHFERKSRTRRFRYRSDEVRQQQRQ*
Ga0105240_106576642	3300009093	Corn Rhizosphere	LAIACENFAIAGAVFKWYIDCVTSNTITIRLKRTRAEIQAKAKPNVNAWVNRLIEEALGPRDADWHEHFDRPARKFRYTSDEVRRRNRR*
Ga0111539_121478231	3300009094	Populus Rhizosphere	KAEIEANAKPNVNAWVNKLIEHALGPQRADWNEHFDRLPSGRKFRLSGRVGRRER*
Ga0066709_1001086255	3300009137	Grasslands Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRTVDWNEHFNRKSRQRRFHYRASEMRRSER*
Ga0066709_1015482432	3300009137	Grasslands Soil	LRRPKAEVEAHAKPNVNAWINKLIEHALGPRTVDWKEHFDRLSSARKFRLTGKVERRER*
Ga0066709_1016541552	3300009137	Grasslands Soil	VKSNTITIQLRRPKAEIEANAKPNVNAWVNKLIERALGPREVDWSEHFDRPSSGRKFHLSGKVERRES*
Ga0066709_1022750392	3300009137	Grasslands Soil	MTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRPNGELR*
Ga0113563_117394552	3300009167	Freshwater Wetlands	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYCSDAVRREER*
Ga0073936_101843403	3300009175	Freshwater Lake Hypolimnion	VTSSPITIRLRRPKGEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER*
Ga0105242_121419991	3300009176	Miscanthus Rhizosphere	SSSQVTKSLPILDLVWYINSVTSNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRKADWNEHFDRLPSGRKFRLSGMVERRER*
Ga0114946_100737972	3300009504	Sediment	MTSNTITIRLRRPKAEIEAVAKPNVNAWVNKLIERALAPPAVDWKEHFERKSRTRRFRYRSDEVRAEQRR*
Ga0114946_106925662	3300009504	Sediment	MTSNTITVRLRRPKAEIEAVAKPNVNAWVNKLIERALASRPADWKEHFARKSQRRCFHYRSDEVRQYQRR*
Ga0105237_115995482	3300009545	Corn Rhizosphere	MPRPLAQLAALWYTVSVTSNTITIRLRRPKAEIEAKARPNVNAWVNQLIENALTPRSAGWAEHFDRPSSGRKFRYSKETQRRER*
Ga0116107_10550802	3300009548	Peatland	LRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER*
Ga0116116_11723301	3300009621	Peatland	PCVTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFHYSSQVKRAER*
Ga0116114_11596672	3300009630	Peatland	VTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER*
Ga0116223_103465182	3300009839	Peatlands Soil	LRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER*
Ga0134088_105319302	3300010304	Grasslands Soil	MTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRRQR*
Ga0134088_106434441	3300010304	Grasslands Soil	KAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASELRRGER*
Ga0134086_101387662	3300010323	Grasslands Soil	PKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWTEHFDRKSRQRRFRYRASEMRRGER*
Ga0136847_119425131	3300010391	Freshwater Sediment	VTSNTITIRLRRPKAEIEAKATPNINAWVNLLIEQALAPRNVDWNEHFDRASSGRKFRCTGKVERRER*
Ga0134124_100917653	3300010397	Terrestrial Soil	VTSNTITIRLRRPKAEVEATAKPNVNAWVNKLIDQALGPRKVDWNDHFDRPSRRTFRLTGKVERRER*
Ga0134127_122055292	3300010399	Terrestrial Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPADWNEHFDRKSKQRRFRYRASQMRRVER*
Ga0134123_116616191	3300010403	Terrestrial Soil	VTSNTITIRLRRSKAEIEAAARPNVNAWVNKLIEQALGPRPVDWMEHFNRKSRQRRFRYRASEMRRGER*
Ga0137389_107289101	3300012096	Vadose Zone Soil	MTSERITIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPQSVDWNEHFERPSSGRKFRYSAKVDRRER*
Ga0137365_104458861	3300012201	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSRQRRFHYRASEMRRSER*
Ga0137365_105411892	3300012201	Vadose Zone Soil	LRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0137374_108350572	3300012204	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSRQRRFRYRASEMRQGER*
Ga0137381_110183962	3300012207	Vadose Zone Soil	LRRPKAEVEAYAKPNVNAWVNKLIEHALGPRKVDWNEHFDQPSSGRKFRCTGKVERRER*
Ga0137378_108005042	3300012210	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARKFRYTSDEIRSQDRR*
Ga0150985_1120174291	3300012212	Avena Fatua Rhizosphere	VTSKTITIRLRRPKAEIEARAKPNVNAWINQLIEKALGPRLADWNEHFNRPSGRKFRFTGKLERRER*
Ga0137372_108137162	3300012350	Vadose Zone Soil	VTSKTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWTEHFDRKSRQRRFRYRASEMRRGER*
Ga0137367_111098272	3300012353	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARRFRYTSDEIRSQDRR*
Ga0137371_100761463	3300012356	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSRQRRFRYRASEMRQDER*
Ga0150984_1164013941	3300012469	Avena Fatua Rhizosphere	TVRLRRPKAEIEARAKPNVNAWVNQLIEQALGPRKADWNEHFDRKPARTFRYKSDEVRRADR*
Ga0150984_1217391472	3300012469	Avena Fatua Rhizosphere	ITIRLRRTKAEIEANAKPNVNAWVNKLIEHALGPRKLDWNEHFDRLCSARKFRLSGKVERRER*
Ga0137373_112505612	3300012532	Vadose Zone Soil	AWYKICVTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARKFRYTSDEIRSQDRR*
Ga0137358_104288372	3300012582	Vadose Zone Soil	MTSNTITIRLRRPKQEIEAKARPNVNAWVNKLIEQALGPRTVDWNEHFNRPSPRDRRFRYTSDEIRRLQR*
Ga0137395_105636001	3300012917	Vadose Zone Soil	ESLDHFPVVWYTSSVTSNTITIRLRRPKAELEAKAKPNVNAWVNNLIEQALGPRAADWNEHFDRVSSGRKFFCTGKVERRER*
Ga0137396_108428361	3300012918	Vadose Zone Soil	VRRETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRSHFRASETRHASRR*
Ga0137394_109510462	3300012922	Vadose Zone Soil	ETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRFHFRASEMRHASRR*
Ga0137359_108956522	3300012923	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNINAWVNKLIERALGPRPVDWSEHFDRKSRQRRFRYRASEMRRGER*
Ga0137419_118176661	3300012925	Vadose Zone Soil	VRRETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRFHFRASEMRHASRR*
Ga0181538_105553682	3300014162	Bog	EIEAKAKPNINARVNQLIEDALGARGADWVEHFDRPSSGRQFRLTGKVERAER*
Ga0182019_102591902	3300014498	Fen	PRAEIEAKAKPNLNAWVNKLIEQAIGPRDVDWNAHFDRPSSGRKFRYSSQVKRAER*
Ga0182021_115386022	3300014502	Fen	AGHVWYNACVTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRSADWNEHFDRPSSGRKFRSSSQVKRAER*
Ga0182021_119018953	3300014502	Fen	VTSNTITIRLRRPKAEIEAKARPNVNAWVNKLIEQALGPRDVDWNEHFDRPSSGRRFRCTGKVERNER*
Ga0182027_103805013	3300014839	Fen	VTSNTITIRLRRPKAEIEASAKPNVNAWVNKLIEHALGPRPVDWNEHFDRPSSGRKFRCTGKVERRER*
Ga0182027_109301483	3300014839	Fen	PCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDRPSSGRKFRYSSRVKRAER*
Ga0182037_121427232	3300016404	Soil	VTSNTITIRLRRPKAEVEARAKPNVNAWVNQLIERALAPRTTDWNEHFDQPSSGRRFRQSGQVDRQER
Ga0134083_102982371	3300017659	Grasslands Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER
Ga0187848_103416292	3300017935	Peatland	VTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0187778_109917751	3300017961	Tropical Peatland	MTSNVITIRLRRPKAEIEAQAKPNVNAWVNALIERALGPRRADWKEHFDRPSTGRTFRLTGKVGRHER
Ga0187865_10128875	3300018004	Peatland	VTSNTVTIRLRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187886_10574922	3300018018	Peatland	VTSNTIAIRLRRPKAEIETNAKPNVNAWVNKLIEHALGPRRVGWNEHFDRLSSGRKFRLTGKVERRER
Ga0187861_102181122	3300018020	Peatland	LPSQILPRPSTYYPLSVTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0187882_12363592	3300018021	Peatland	RPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187881_100432742	3300018024	Peatland	VTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFHYSSQVKRAER
Ga0187881_100550825	3300018024	Peatland	LRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187862_106347732	3300018040	Peatland	VRSKTITIRLRRPKAEIEAKAKPNINARVNQLIEDALGARGADWVEHFDRPSSGRQFRLTGKVERAER
Ga0187893_100894411	3300019487	Microbial Mat On Rocks	MAKPNINAWVNKLIEQVIGPRPIDWSDHFDRKSKQRRFRYRASEMRQGER
Ga0193692_10171203	3300020000	Soil	LRRPKAEIEANAKPNVNAWVNRLIEQALGARKADWNEHFDRPPSGRKFRLTGEVERRER
Ga0194057_102214682	3300021072	Anoxic Zone Freshwater	NMGNNTCVTSSPITIRLRRPKGEIEGNAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0210406_107007082	3300021168	Soil	LRRPKAEIEAKAKPNVNAWINKLIEQALGPREADWNEHFDRAPVRKFRYKSDEVRRAER
Ga0194060_100395383	3300021602	Anoxic Zone Freshwater	MGNNTCVTSSPITIRLRRPKGEIEGNAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0212088_100245666	3300022555	Freshwater Lake Hypolimnion	MGNNTCVTSSPITIRLRRPKGEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0247668_10052343	3300024331	Soil	VTSNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRKVDWNEHFNRPSSGRKFRCTGKVERCER
Ga0208189_10824862	3300025444	Peatland	LSVTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0209470_11483172	3300026324	Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER
Ga0209726_101525831	3300027815	Groundwater	MTSNVITIRLRRPKAQIQAKAKPNIDAWVNGLIEQALGPRNADWNEHFDKPLTGRNYCCTGKVERRER
Ga0209517_100433414	3300027854	Peatlands Soil	MNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER
Ga0209415_102738942	3300027905	Peatlands Soil	LRPVRLKRVARKMNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER
Ga0302222_101803182	3300028798	Palsa	VTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0239579_10387601	3300029442	Freshwater Lake	GEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0311340_106928053	3300029943	Palsa	LQHAKGLATKTILWYLWSVTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0311372_126802801	3300030520	Palsa	VTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRY
Ga0170824_1210922741	3300031231	Forest Soil	SNTITIRLRRPKSEIEANAKPNVNAWVNKLIEHALGPRNVDWNEHFDQPSSGRKFRCTGRVERRER
Ga0302325_100758074	3300031234	Palsa	VTSNTITIRLTRPKTEIKAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0315274_100192646	3300031999	Sediment	VVQACVTETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPRQVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315282_100765732	3300032069	Sediment	VTPNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRRVDWNEHLDRPSSGRKFRLTGKVERRER
Ga0315292_113055061	3300032143	Sediment	TPGMKSNVNTVRLRRPKAEIQAKARPNLNAWINQLIEQALGPRSADWNEHFDRPSSGRKFRYSSLAQRAER
Ga0315295_112816451	3300032156	Sediment	ETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPREVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315295_114378241	3300032156	Sediment	QGNVWYKPCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNQLIEQALGPRSADWNEHFDRPSSGRRFHYSSKVKRAER
Ga0315283_115163052	3300032164	Sediment	KPFACPGEVWYKPCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDQPSAGRKFRYSSQVNRAER
Ga0315268_1000156912	3300032173	Sediment	VRQACYKNGVTTNTITIRLRRPKPELQAKAKPNINAWVNKLIEQALGPPDPDWNEHFDRPTAGRRFRYTSDECRSIHS
Ga0315286_104278623	3300032342	Sediment	ITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDQPSAGRKFRYSSQVNRAER
Ga0315287_113957661	3300032397	Sediment	MTSNLVTIRLRQPKAELEARAKPNLSTGINQLIEQALGPRSADWNEHFDRPPSGRKFRYSPQVKRAER
Ga0315287_123255201	3300032397	Sediment	RLRRPRAEIEAKAKPNLNAWVNQLIEEALGPRSADWNEHFDRPSSGRKFRYSSLAQRAER
Ga0315275_110390362	3300032401	Sediment	VVWYKNCVTETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPREVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315273_131830141	3300032516	Sediment	TSNTITIRLRRPKAEIEAKAKPNLNAWVNQLIEQAIGPRSVDWNEHFDRPSSGRKFRSSSLIKRVER
Ga0335085_117029422	3300032770	Soil	MTSNTITVRLKRPKAEIEAAAKPNVNAWVNKLIEQALGPREVDWAAHFNRKSKQRRFHYRASEMRKSER
Ga0335083_104792062	3300032954	Soil	MTSNTITIRLRRPKSEITAKAQPNVNAWINNLIEQALGPQKVDWNAHFDRPSSGRKFRYSDKVQRRER
Ga0326727_1000118830	3300033405	Peat Soil	VTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFRYSSQVKRAER
Ga0326727_100233783	3300033405	Peat Soil	VISNTITIRLRRLKSEIQAKARPNVNAWFNHLIEQALCPRHTDWHEHFTRPSSGRKFRCSDKVERRER
Ga0316622_1003840063	3300033416	Soil	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYCSDAVRREER
Ga0316622_1026289121	3300033416	Soil	RRSGAWYRVCVTSNTITIRLRRPKAIIEAAAKPNVNAWVNELIERALAPKPVDWKEHFERKSRTRRFRYRSDEVRQQQRQ
Ga0316620_119726102	3300033480	Soil	IRLRRPKAEIEAAAKPNINAWVNKLIEHALGPRQVDWNEHFDRSSSGRKFRLTGRVERRE
Ga0316627_1018071601	3300033482	Soil	VRPHAACYTACVTSNTITVRLRRTKAEIEAAAKPNVNAWVNKLIERALAPPTVDWKEHFERKSQSRRFRYRSDEIRAQQQR
Ga0316616_1027282783	3300033521	Soil	RRPKAEIEAAARPNVNAWVNKLIERALAPPTVDWKEHFERKSQVRRFRYRSNEVRARQRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences