Metagenome Family F061880

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061880
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	96 residues
Representative Sequence	SLTNYYFTIDPKTNHAVPKNLFEGEHGPTNEISSAMLFNETPASAPLKIVRGQTLAPSFSIYVDDANGKIDDNGRTLSRKILRWNGKIYR
Number of Associated Samples	95
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.77 %
% of genes near scaffold ends (potentially truncated)	98.47 %
% of genes from short scaffolds (< 2000 bps)	96.18 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.939 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (12.977 % of family members)
Environment Ontology (ENVO)	Unclassified (53.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.863 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.05% Coil/Unstructured: 66.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01183	Glyco_hydro_25	9.16
PF01435	Peptidase_M48	7.63
PF10012	DUF2255	3.82
PF06224	HTH_42	3.05
PF03061	4HBT	3.05
PF04984	Phage_sheath_1	2.29
PF03621	MbtH	1.53
PF00486	Trans_reg_C	0.76
PF09471	Peptidase_M64	0.76
PF02371	Transposase_20	0.76
PF05598	DUF772	0.76
PF04055	Radical_SAM	0.76
PF01053	Cys_Met_Meta_PP	0.76
PF08443	RimK	0.76
PF13424	TPR_12	0.76
PF00561	Abhydrolase_1	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	9.16
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.05
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	2.29
COG3251	MbtH family protein, regulates adenylation domains of NRPSs	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.53
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.76
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.76
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.76
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.76
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.94 %
Unclassified	root	N/A	31.30 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.17 %
Unclassified	root	N/A	31.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.11 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	34.35 %
Unclassified	root	N/A	31.30 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.29 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.29 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.35 %
Unclassified	root	N/A	31.30 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.29 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.35 %
Unclassified	root	N/A	31.30 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.29 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.29 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.35 %
Unclassified	root	N/A	31.30 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.29 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.29 %
Lautropia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.35 %
Unclassified	root	N/A	31.30 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.29 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.29 %
unclassified Lautropia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.35 %
Unclassified	root	N/A	31.30 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.29 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.29 %
Lautropia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104679368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300003267\|soilL1_10063191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1789	Open in IMG/M
3300003319\|soilL2_10104572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300004114\|Ga0062593_101554012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300004114\|Ga0062593_102024753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300004156\|Ga0062589_100619556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300004156\|Ga0062589_101890524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300004157\|Ga0062590_102677551	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005093\|Ga0062594_101715919	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005093\|Ga0062594_102269776	Not Available	589	Open in IMG/M
3300005093\|Ga0062594_102722993	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005288\|Ga0065714_10336764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005289\|Ga0065704_10614079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300005290\|Ga0065712_10041739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300005293\|Ga0065715_10294144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300005293\|Ga0065715_10313375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300005293\|Ga0065715_11166868	Not Available	505	Open in IMG/M
3300005333\|Ga0070677_10217780	Not Available	931	Open in IMG/M
3300005334\|Ga0068869_102036139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005338\|Ga0068868_100666554	Not Available	928	Open in IMG/M
3300005338\|Ga0068868_101759108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300005340\|Ga0070689_101186680	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005343\|Ga0070687_101411557	Not Available	521	Open in IMG/M
3300005343\|Ga0070687_101548276	Not Available	500	Open in IMG/M
3300005345\|Ga0070692_10729531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300005345\|Ga0070692_10805466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300005364\|Ga0070673_101679064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005366\|Ga0070659_101300922	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005367\|Ga0070667_101354387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005440\|Ga0070705_100424491	Not Available	991	Open in IMG/M
3300005441\|Ga0070700_100970451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	697	Open in IMG/M
3300005445\|Ga0070708_100666252	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005457\|Ga0070662_101128793	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300005459\|Ga0068867_102142060	Not Available	530	Open in IMG/M
3300005518\|Ga0070699_100395165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300005539\|Ga0068853_100817733	Not Available	893	Open in IMG/M
3300005546\|Ga0070696_100716084	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300005547\|Ga0070693_100347165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300005549\|Ga0070704_101915334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	550	Open in IMG/M
3300005577\|Ga0068857_101140367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005577\|Ga0068857_101845454	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005577\|Ga0068857_102236155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005578\|Ga0068854_101538126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300005615\|Ga0070702_100325522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300005615\|Ga0070702_100384863	Not Available	999	Open in IMG/M
3300005616\|Ga0068852_100232907	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300005617\|Ga0068859_102953506	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005618\|Ga0068864_100662627	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005618\|Ga0068864_100767305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300005618\|Ga0068864_101557702	Not Available	664	Open in IMG/M
3300005840\|Ga0068870_11013833	Not Available	593	Open in IMG/M
3300005841\|Ga0068863_101120326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300005842\|Ga0068858_101223024	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005843\|Ga0068860_100115840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2563	Open in IMG/M
3300005843\|Ga0068860_101600484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005843\|Ga0068860_101625078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005843\|Ga0068860_102275528	Not Available	563	Open in IMG/M
3300005844\|Ga0068862_100648044	Not Available	1018	Open in IMG/M
3300005844\|Ga0068862_101555071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005844\|Ga0068862_102520416	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006358\|Ga0068871_100586327	Not Available	1013	Open in IMG/M
3300006844\|Ga0075428_100454653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1372	Open in IMG/M
3300006871\|Ga0075434_100541897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300006871\|Ga0075434_101642100	Not Available	651	Open in IMG/M
3300006881\|Ga0068865_100461294	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300006954\|Ga0079219_10090667	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300009036\|Ga0105244_10401371	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009093\|Ga0105240_10752908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300009093\|Ga0105240_11108078	Not Available	842	Open in IMG/M
3300009098\|Ga0105245_12569236	Not Available	562	Open in IMG/M
3300009100\|Ga0075418_12166247	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300009101\|Ga0105247_11615911	Not Available	533	Open in IMG/M
3300009147\|Ga0114129_10242948	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300009148\|Ga0105243_11384649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300009156\|Ga0111538_13855823	Not Available	519	Open in IMG/M
3300009162\|Ga0075423_11734958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300009174\|Ga0105241_10486247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300009174\|Ga0105241_10942382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300009176\|Ga0105242_10368856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1331	Open in IMG/M
3300009545\|Ga0105237_11501963	Not Available	680	Open in IMG/M
3300009553\|Ga0105249_10780954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1018	Open in IMG/M
3300010166\|Ga0126306_11529404	Not Available	554	Open in IMG/M
3300010358\|Ga0126370_12030206	Not Available	563	Open in IMG/M
3300010359\|Ga0126376_10890449	Not Available	879	Open in IMG/M
3300010362\|Ga0126377_13117408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010397\|Ga0134124_10597844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300010397\|Ga0134124_12053678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300010399\|Ga0134127_10102117	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2515	Open in IMG/M
3300010399\|Ga0134127_10650257	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300010399\|Ga0134127_11960965	Not Available	663	Open in IMG/M
3300010400\|Ga0134122_11687156	Not Available	661	Open in IMG/M
3300010403\|Ga0134123_10830732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300010403\|Ga0134123_10951099	Not Available	870	Open in IMG/M
3300011119\|Ga0105246_10305769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	1286	Open in IMG/M
3300011119\|Ga0105246_12288993	Not Available	528	Open in IMG/M
3300012911\|Ga0157301_10250255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012955\|Ga0164298_11312499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300013296\|Ga0157374_10639861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300013297\|Ga0157378_11062108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300013297\|Ga0157378_11823528	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300013297\|Ga0157378_12364995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300013306\|Ga0163162_10786371	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300013306\|Ga0163162_12583565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300013307\|Ga0157372_12963124	Not Available	543	Open in IMG/M
3300013308\|Ga0157375_12442508	Not Available	624	Open in IMG/M
3300014325\|Ga0163163_11062519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300014497\|Ga0182008_10828897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300015372\|Ga0132256_103607259	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300015374\|Ga0132255_102325173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300018476\|Ga0190274_13995591	Not Available	500	Open in IMG/M
3300021445\|Ga0182009_10103216	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300021445\|Ga0182009_10719941	Not Available	541	Open in IMG/M
3300024290\|Ga0247667_1003535	All Organisms → cellular organisms → Bacteria	3474	Open in IMG/M
3300025900\|Ga0207710_10184564	Not Available	1025	Open in IMG/M
3300025918\|Ga0207662_11271145	Not Available	523	Open in IMG/M
3300025920\|Ga0207649_11675750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300025932\|Ga0207690_11728968	Not Available	522	Open in IMG/M
3300025935\|Ga0207709_11363775	Not Available	587	Open in IMG/M
3300025935\|Ga0207709_11459701	Not Available	567	Open in IMG/M
3300025960\|Ga0207651_10371899	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	1209	Open in IMG/M
3300026041\|Ga0207639_11258138	Not Available	694	Open in IMG/M
3300026088\|Ga0207641_11836489	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300026095\|Ga0207676_10875540	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300026095\|Ga0207676_10998733	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300026095\|Ga0207676_12039786	Not Available	572	Open in IMG/M
3300026116\|Ga0207674_11213463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300026116\|Ga0207674_11235919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300026116\|Ga0207674_11458559	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031908\|Ga0310900_11653804	Not Available	543	Open in IMG/M
3300033412\|Ga0310810_11089358	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.12%
Environmental	Environmental	35.88%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.12%
Terrestrial	Environmental → Terrestrial	35.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	32.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.77%
Roots	Host-Associated → Plants → Roots	1.53%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	27.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.90%
Loam	Environmental → Terrestrial → Soil → Loam	11.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	27.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	12.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046793682	3300000364	Soil	EVSTGSGGLNPSLTNYYFTIDPRTNQAVAKKLFKGDRGPTNEISSAMLMTAGGAEPLKVLRGQSMRPNFVIYVDDEHGKIDDSGRTLSRKVLHWNGKLYL*
soilL1_100631911	3300003267	Sugarcane Root And Bulk Soil	GSGGLTPSLTNYYFVIDPQTHQALPKNLFNGDHGPTNEITSAMLLSDSRPAAEPLKIIQRQSLARSFIIYVDAENGRIDDNGRTLSRKVLRWNGKVYR*
soilL2_101045722	3300003319	Sugarcane Root And Bulk Soil	TGSGGLTPSLTNYYFVIDPHTHQAVPKNLFNGDHGPTNQITSAMLLSEARPAAEPLKVVQGQTLARSFIIYVDDEKGKIDDNGRTLSRKVLRWNGKVYR*
Ga0062593_1015540122	3300004114	Soil	IEVSTGSGGLNPTLTNYYFAIDPVTNNAVPKKLFKGENGPTNEITSAMLFGDVRGPAAPLNVIRGGTLARSFSIYEDDENGRVDDNGRKLSRRILRWNGKMYR*
Ga0062593_1020247532	3300004114	Soil	PSLTNYYFVIDPVTKKAAPKNLFMGDRGPTNQISSAMLFNDVRVAAAPLKVIQGQSLARSFIIYVDDENGKIDDNGRTFSRRVLRWNGSVYR*
Ga0062589_1006195561	3300004156	Soil	GLNPSLTNYYFTIDPRTNQAVPKKLFKGDHGATNEISSALLMSAGGAEPLKVVRGSALAPTFVIYSDDERGKIDDNGRTLSRKLMRWNGKIYQ*
Ga0062589_1018905242	3300004156	Soil	LTNYYFVIDPKTNQAVPKNLFKGDHGPTNQISSAMLFNEVRAAATPLKVIQGQSLARSFIIYVDDANGKIDDNGRTFSRKILRWNGIVYR*
Ga0062590_1026775511	3300004157	Soil	LTVAFAKLNGEEIVEVSTWSGGLNPTLTNYYFAIDPKTSHAVPRKLFKGDHGPTNEISSAILLNSASAPLKIVRGQTLARSFSIYSDDPNGKIDDNGRTLSRKTLRWNGKLYR*
Ga0062594_1017159192	3300005093	Soil	TNHAVPKNLFRGDHGPTNEISSAMLLGATPASEPLKIVRANTLAKSFTIYIDDANGKIDDNGRTLTRKIMHWNGKVYR*
Ga0062594_1022697762	3300005093	Soil	YYFVIDPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPVTTPLKIIRGRSLTPNFIIYVDSETGKIDDNGRKLARQILRWNGKLYK*
Ga0062594_1027229932	3300005093	Soil	SVTLGFARFGGEEIIEVATGSGGLTPSLTNYYFVIDPQTKQAVPKKLFRGDHGPTNEISSAMLFNATPAITPLKIIRGQSLAPSFIIYVDSENGAVDDNGRKLSRKILRWNGKGYR*
Ga0065714_103367641	3300005288	Miscanthus Rhizosphere	VSTGSGGLTPSLTNYYFVIDPKTNKAVPKNFFKGDRGPTNQISSAMLFNESRAAARPLNIIQGRSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGSVFR*
Ga0065704_106140791	3300005289	Switchgrass Rhizosphere	LTNYYFVIDPETNQAVPKNLFQGDRGPTNQISSAMLLNEVRATPLKVIQGQSLATTFFIYADDANGKIDDNGRTLSRKILRWNGKVYR*
Ga0065712_100417392	3300005290	Miscanthus Rhizosphere	AQEIVEVSTGSGGLTPSLTNYYFVIDPKTNKAVPKNFFKGDRGPTNQISSAMLFNESRAAARPLKVIQGRSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGSVFR*
Ga0065715_102941441	3300005293	Miscanthus Rhizosphere	TPSLTNYYFVIDPETKQAVPKNLFKGDRGPTNQISSAMLLSEMRATPLKVIQGQSLATSFTVYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0065715_103133752	3300005293	Miscanthus Rhizosphere	VIDRHTHRAVPKNLFNGDRGLTNQITSAMLLGEARPAAEPLKVIQGQTLARSFIIYVDDEKGKIDDNGRTLSRKVLRWNGKVYR*
Ga0065715_111668682	3300005293	Miscanthus Rhizosphere	TNYYFVIDPNTHQAIPKNLFIDDKKLTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0070677_102177801	3300005333	Miscanthus Rhizosphere	TGSGGLTPSLTNYYFVIDPATHHAIPKNLFIEDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0068869_1020361392	3300005334	Miscanthus Rhizosphere	LTNYYFVIDPQTKRAVPKNLFRGDHGPTNEISSAMMFNATPATTPLKIIRGRSLAPSFIIYVDNENGKIDDNGRKLSRQVLRWNGKEYR*
Ga0068868_1006665541	3300005338	Miscanthus Rhizosphere	LTNYYFVIDPNSHHAIPKNLFNGDHGPTNEISSAMLLSDSRATVEPLKVIQGQTLARTFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR*
Ga0068868_1017591081	3300005338	Miscanthus Rhizosphere	EVSTGSGGLTPTLTNYYFVIDPKTNQAVPKNFFKGDRGPTNQISSAMLFNDVRAAATPLKVIQGQSLARSFIIYVDDANGKIDDNGRTLSRKILRWNGSVYR*
Ga0070689_1011866802	3300005340	Switchgrass Rhizosphere	EVSTGSGGLTPSLTNYYFVIDPNSHHAIPKNLFNGDHGPTNEISSAMLLSDSRATVEPLKVIQGQTLARTFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR*
Ga0070687_1014115572	3300005343	Switchgrass Rhizosphere	AKLNAQEIVEVSTGSGGLTPSLTNYYFVIDPKTNEAVPKNFFEGDHGPTNQISSAMLFNESRAAATPLKVIQGQSLARSFIIYVDDSNGKIDDNGRTLSRKVLRWNGTVYR*
Ga0070687_1015482761	3300005343	Switchgrass Rhizosphere	EEIIEVATGSGGLTPSLTNYYFVIDPQTKQAVPKNLFRGDHGPTNEISSAMLFNATPAITPLKIIRGQSLAPSFIIYVDSENGAVDDNGRKLSRKILRWNGKGYR*
Ga0070692_107295311	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AQEIVEISTGSGGLTPSLTNYYFVIDPDTKQAVPKNLFKGDRGPTNQISSAMLLSDARSAAEPLKLIQGQSLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGSVYR*
Ga0070692_108054662	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FVIDRGTKQAVPKNLFKGDRGPTNRISSAMLLSDSRPASEPLKVIQGQSLARSFIIFVDDANGNIDDNGRTLSRKVLRWNGNIYRIGRSQFH*
Ga0070673_1016790641	3300005364	Switchgrass Rhizosphere	NGQQIIEISTGSGGLTPSLTNYYFAIDPRTNHAVPKNLFRGDHGPTNEISSAMLLGATPASEPLKIVRANTLAKSFTIYIDDANGKIDDNGRTLTRKIMHWNGNAYR*
Ga0070659_1013009222	3300005366	Corn Rhizosphere	STGSGGLTPSLTNYYFVIDPNTHQAIPKNLFIEDKKPTNEISSAMLLSDSRAASEPLKVIRGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0070667_1013543872	3300005367	Switchgrass Rhizosphere	LNAQEIVEISTGSGGLNPSLTNYYFVIDPNTHQAVPKNLFNGDHGPTNQITSAMLLSDARPAAEPLKVIQGQILARSFIIYVDDEKGKIDDNGRTLSRKLLRWNGKVYR*
Ga0070705_1004244912	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IDPATHHAIPKNLFIEDKKSTNEISSAMLLSDSRPASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR*
Ga0070700_1009704511	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LNPSLTNYYFTIDPRTNQAVPKKLFKGEHGATNEISSALLMSAGGAEPLKVVRGSALAPTFVVYSDDEHGKIDDNGRTLSRKLMRWNGKIYR*
Ga0070708_1006662523	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PSLNNYYFVIDPRSKQAVPKNLFRDEHGPTNQIWSAMLFNAAPADTPLKIIRGHSLAPSFLIYVDSKNGKIDDNGRKLSRKVLRWNGKTYR*
Ga0070662_1011287932	3300005457	Corn Rhizosphere	VPKNLFKGEHGPTNEISSAMLFNSSTPLKIVRGQTLAPSFSIYLDDANGKIDDNGRTLSRKVLRWNGKIYR*
Ga0068867_1021420602	3300005459	Miscanthus Rhizosphere	GSEEIIEVATGSGGLTPSLTNYYFVIDPQTKHAIPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGRSLAPNFIIYVDSETGKIDDNGRKLARQILRWNAKLYK*
Ga0070699_1003951651	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	NYYFVIDPRTSEAVPKNLFKGPHGPTNEISSALLMNTNATPLNIVRGKSLAPSFTIYVDDLKGKIDDNGRTLSRKILRWNGKMYRQV*
Ga0068853_1008177332	3300005539	Corn Rhizosphere	NSHHAIPKNLFNGDHGPTNEISSAMLLSDSRATVEPLKVIQGQTLARTFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR*
Ga0070696_1007160842	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AKLNGEEIVEVATWSGGLNPSLTNYYFTIDQKTNHAVPKNLFKGDHGPTNEISSALPLNSAAAPLKIVRGQTMAPSFILYADDPNGKIDDNGRTLSRKILRWNGKLYR*
Ga0070693_1003471652	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	TNQAVPKNFFKGDHGPTNQISSAMLFNEVRAAATPLKVIQGQSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGNVYLN*
Ga0070704_1019153342	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	YYFAIDPRTNQAVPKNLFRDEHGPTNQVSSAMLLEASGAEPLKVARGNTLAPSFVVYVDSEKGKIADGGRTLSRKNLRWNGNVYR*
Ga0068857_1011403671	3300005577	Corn Rhizosphere	STGSGGLTPSLTNYYFVIDPDTKQAVPKNLFKGDRGPTNQISSAMLLSDARPASEPLKVIQGQSLARSFIIFVDDANGNIDDNGRTLSRKVLRWNGNIYRIGRSQFH*
Ga0068857_1018454541	3300005577	Corn Rhizosphere	NYYFVIDPKTKHAVPKYLFHGDRSHTNEISSAMLFNATPAMTPLKIIRGQSLAPSFIIYDDNENGRIDDNGRKLSRRILRWNGKEYR*
Ga0068857_1022361551	3300005577	Corn Rhizosphere	YYFVIDPQTKQAVPKNLFRGEHGPTNEISSAMLFNASPASTPLKIIRGQSLAPSFTIYDDNENGKIDDNGRKLSRKILRWNGKGYR*
Ga0068854_1015381261	3300005578	Corn Rhizosphere	TPSLTNYYFVIDPKTNEAVPKNFFEGDHGPTNQISSAMLFNESRAAATPLKVIQGRSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGSVFR*
Ga0070702_1003255222	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GLNPSLTNYYFTIDPRTNQAVPKKLFKGEHGATNEISSALLMSAGGAEPLKVVRGSALAPTFIVYSDDEHGKIDDNGRTLSRKLMRWNGKIYR*
Ga0070702_1003848631	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PSLTNYYFAIDPATHHAIPKNLFIEDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0068852_1002329071	3300005616	Corn Rhizosphere	VIDPNTHHAVPKNLFNGDHGPTNEISSAMLLSDSRATAEPLKLIRGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0068859_1029535062	3300005617	Switchgrass Rhizosphere	SGGLNPSLTNYYFAIDPKTGHAVPKKLFQGEHGPANEISSAMLFNDTPATAPLKIIRGKALAPSFIVYVDDQKGKINDNDRTLSRRILRWNGSIYR*
Ga0068864_1006626271	3300005618	Switchgrass Rhizosphere	IIEISTGSGGLNPTLTNYYFAFDPKTNYAVPKNLFKGEHGLTNEITSAMRFNERFATAPLKVFFGHSLAATFNIYEDNENGKIDDNGRKLSRRLLRWNGKMYR*
Ga0068864_1007673051	3300005618	Switchgrass Rhizosphere	IDPKTNQAVPKNFFKGDRGPTNQISSAMLFNDVSPAATPLKVIQGQSLARSFIIYVDDADGKIDDNGRTLSRKILRWNGNVYR*
Ga0068864_1015577021	3300005618	Switchgrass Rhizosphere	EISTGSGGLNPSLTNYYFAIDPHARRAVPKNLFGGEHGPTNEISSSMLFGYGPGAPEALKIVRGSTLAPSFSIYIEDDKGRIDDNGRKFVRKILRWNGKSYH*
Ga0068870_110138331	3300005840	Miscanthus Rhizosphere	SGGLTPSLTNYYFVIDPNTHQAIPKNLFIADKKPTNEIASAMLLSDSRAATEPLKVIQGQTLAPAFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0068863_1011203262	3300005841	Switchgrass Rhizosphere	LTNYYFAIDPRTNQAVPKNLFRDEHGPTNQISSAMLLEGSGAEPLKVVRGNSLSPSFVVYVDSEKGKIEDSGRTLSRKMLRWNGNVYR*
Ga0068858_1012230241	3300005842	Switchgrass Rhizosphere	EVSTGSGGLTPSLTNYYFAIDPATHHAIPKNLFLEDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0068860_1001158404	3300005843	Switchgrass Rhizosphere	RLAKLNTQQIVEVSTGSGGLTPSLTNYYFVIDPNTHQAVPKNLFIDDKKPTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0068860_1016004842	3300005843	Switchgrass Rhizosphere	LGSEEIIEIATGSGGLTPGLTNYYFVIDPRTNHAVPKNLFIGDHGPTNEISSAMLFGGAPASAPLKIVRGNTLARSFIVYNDDANGKIEDNGRTLSRKILRWNGKLYR*
Ga0068860_1016250781	3300005843	Switchgrass Rhizosphere	TNYYFAIDPHTNQAVPKNLFKGEHGPTNEISSAMLFNDVPATALKVLRGNTLARSFTIYVDDEKGKIDDDGRTLSRKIMRWNGTSYR*
Ga0068860_1022755281	3300005843	Switchgrass Rhizosphere	QTKQAVPKNLFRGDHGPTNEISSAMLFNATPAITPLKIIRGQSLAPSFIIYVDSENGAVDDNGRKLSRKILRWNGKGYR*
Ga0068862_1006480442	3300005844	Switchgrass Rhizosphere	RLAKLNTQQIVEVSTGSGGLTPSLTNYYFVIDPNTHQAIPKNLFVHDKKPTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR*
Ga0068862_1015550712	3300005844	Switchgrass Rhizosphere	QQIVEISTGSGGLNPSLTNYYFVIDPNTHQAVPKNLFNGERGPTNEISSAMLLSDTRPAAEPLKVIQGQTLARSFIIYADDANGKIDDNGRTLSRKVLRWNGKVFR*
Ga0068862_1025204162	3300005844	Switchgrass Rhizosphere	LTNYYFAFDPKTNYAVPKNLFKGEHGLTNEITSAMRFNERFATAPLKVFFGHSLAATFNIYEDNENGKIDDNGRKLSRRLLRWNGKMYR*
Ga0068871_1005863272	3300006358	Miscanthus Rhizosphere	YFAIDPATHHAIPKNLFIEDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0075428_1004546531	3300006844	Populus Rhizosphere	TNYYFAIDPRTNQAVPKNLFRDAHGPTNQVSSAMLLEANGAEPLKVVRGTVLAPSFVVYVDSEKGRIEDSGRMLSRKIMRWNGNVYR*
Ga0075434_1005418971	3300006871	Populus Rhizosphere	GQDIIEISTGSGGLTPSLANYYFAIDPHTNQAVPKNLFKGEHGPTNEISSAMLFNDVPATALKVLRGNTLARSFTIYVDDEKGKIDDNGRTLSRKILRWNGTLYR*
Ga0075434_1016421001	3300006871	Populus Rhizosphere	EVATGSGGLTPSLTNYYFVINPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGHSLAPSFIIYIDDETGKIDDNGRKLSRKILRWNGKRYQ*
Ga0068865_1004612942	3300006881	Miscanthus Rhizosphere	VATGSGGLTPSLTNYYFVIDPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGRSLAPNFIIYVDSETGKIDDNGRKLARQILRWNGKLYK*
Ga0079219_100906672	3300006954	Agricultural Soil	GSGGLTPTLTNYYFVIDPKTNQAVPKNFFKGDHGPTNQISSAMLFNDVRAAATPLKVIQGQSLARSFTIYVDDANGKIDDNGRTLTRKTLRWNGNVYR*
Ga0105244_104013712	3300009036	Miscanthus Rhizosphere	TPSLTNYYFAIDPATHHAIPKNLFIEDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWNGTVYR*
Ga0105240_107529082	3300009093	Corn Rhizosphere	GLNPSLTNYYFTIDRKTNHAVPKNLFKGEHGPTNEISSAMLFNETPASAPLKIVRGQTLAPSFSIYVDDAKGKIDDNGRTLSRKILRWNGKIYR*
Ga0105240_111080782	3300009093	Corn Rhizosphere	QQIVEVSTGSGGLTPSLTNYYFVIDPNTHKAVPKNLFQTTNEISSAMLLSDSRAAAEPLKVIQGQSLARNFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0105245_125692362	3300009098	Miscanthus Rhizosphere	SLTNYYFTIDPKTNHAVPKNLFEGEHGPTNEISSAMLFNETPASAPLKIVRGQTLAPSFSIYVDDANGKIDDNGRTLSRKILRWNGKIYR*
Ga0075418_121662472	3300009100	Populus Rhizosphere	SGGLNPSLTNYYFTIDPKTDHAVPKNLFHRDHGPTNEISSAMLFNSSTPLKIIRGQTLAPSFSIYIDDANGKIDDNGRTVSRKILRWNGKMYR*
Ga0105247_116159111	3300009101	Switchgrass Rhizosphere	IDPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGRSLAPNFIIYVDSETGKIDDNGRKLARQILRWNGKLYK*
Ga0114129_102429484	3300009147	Populus Rhizosphere	LTNYYFTIDPKTNRAAPKNLFKGDRGPTNEISSAMLFNTSASLKIVRGQTLAPSFSVYIDDANGKIDNNGRTLSRKIMRWNGRIYR*
Ga0105243_113846492	3300009148	Miscanthus Rhizosphere	AVPKNLFKGDHGPTNEISSAMLFNDNSASAPLKIVRGHTLAPSFNIYIDDANGKIDDNGRTLSRKILRWNGKMYRQV*
Ga0111538_138558232	3300009156	Populus Rhizosphere	YYFTIDPQTNHAVPKNLFKGDRGPTNEISSAMLFNSSAPLKIVRGLTLAPSFSIYLDDANGKIDDNGRTLSRKVLRWNGKIYR*
Ga0075423_117349581	3300009162	Populus Rhizosphere	PSLTNYYFTIDPRTNQAVAKKLFKGDGGPTNEISSALLMTAAGATPLKVLHGQSMAASFVIYVDDEHGKIDENGRTLSRKLLHWNGKIYQ*
Ga0105241_104862471	3300009174	Corn Rhizosphere	CSGGLNPSLTNYYFTIDPKTNRAVSKNLFKGEHGPTNEISSAMLFNETPASAPLKIVRGQTLAPSFSIYVDDANGKIDDNGRTLSRKILRWNGKIYR*
Ga0105241_109423821	3300009174	Corn Rhizosphere	LTNYYFVIDRDTHRAVPKNLFNGDRGLTNQITSAMLLGETRPAAEPLKVIQGQTLARSFIIYVDDEKGKIDDNGRTLSRKVLRWNGKVYR*
Ga0105242_103688562	3300009176	Miscanthus Rhizosphere	GGLTPSLTNYYFVIDPQTKQAIPKNLFRGEHGATNEISSAMVFNATPAITPLKIIRGQSLAPSFIIYDDNENGKIDDNGRKLSRKILRWNGKEYR*
Ga0105237_115019632	3300009545	Corn Rhizosphere	NMRLAKLNTQQIVEVSTGSGGLTPSLTNYYFVIDPNTHQAIPKNLFIDDKKPTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR*
Ga0105249_107809542	3300009553	Switchgrass Rhizosphere	TLTNYYFVIDPKTNQAIPKNFFKGDHGPTNEISSAMLFNEVRATPLKVIQGQSLTRSFTIYVDDPNGKIDDNGRTLSRKVLRWNGHVYVN*
Ga0126306_115294041	3300010166	Serpentine Soil	SVAFAKLKTQQIVEISTGSGGLNPTLTNYYFVVDPATRQTIPKKIFKRERGLTNEISSAMLLSANGATPLNIVRGNSLAPSFLIYIDDPNGKINDNGRTLSRKTLRWNGSMYR*
Ga0126370_120302061	3300010358	Tropical Forest Soil	YFAIDPRSHQAVPKKLFSGEHGLTNEISSSMLFGAGPGTPEPLKIVRGQSLAPSFSIYEEDPKGKIDDNGRTFSRKILRWNGKIYQ*
Ga0126376_108904492	3300010359	Tropical Forest Soil	PKNLFKGEHGPTNEISSSMLFGYGRGEPEPLKIVRGSSLAPSFSVYVEDDKGRIDDNGRKFVRKILRWNGKSYR*
Ga0126377_131174081	3300010362	Tropical Forest Soil	PSLTNYYFTIDPHTNQAVAKKLFKSDRGLTNEISSAMLMTSAGATPLKVLRGQSMAPSFVIYVDDEHGKIDENGRTLSRKLLRWNGKLYH*
Ga0134124_105978442	3300010397	Terrestrial Soil	ATGSGGLTPSLTNYYFVIDPQTKQAVSKNLFRGEHGPTNEISSAMLFNATPASTPLKIIRGQSLAPSFIIYDDSENGQIDDNGRKLSRKILRWNGKGYR*
Ga0134124_120536782	3300010397	Terrestrial Soil	KLNGEEIIEVSTGSGGLNPGITNYYFTIDPRTNQAVPKKLFKGDRGATNEISSALLMSAGGAEPLKVVRGSALAPTFVIYSDDERGKIDDNGRTLSRKLMHWNGKIYQ*
Ga0134127_101021171	3300010399	Terrestrial Soil	TNYYFTIDQKTNHAVPKNLFKGDHGPTNEISSAMLFNDNSASAPLKIVRGHTLAPSFNIYIDDANGKIDDNGRTLSRKILRWNGKIYHS*
Ga0134127_106502572	3300010399	Terrestrial Soil	TIDPKTNHAVPKNLFKGEHGPTNEISSAMLFNATPASTPLKIVRGQALAPSFSIYLDDANGKIDDNGRTLSRKILRWNGKIYR*
Ga0134127_119609652	3300010399	Terrestrial Soil	DPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGRSLAPNFIIYVDSETGKIDDNGRKLARQILRWNGKLYK*
Ga0134122_116871561	3300010400	Terrestrial Soil	AKLNAQEIVEISTGSGGLTPTLTNYYLVIDPKTNQAIPKNFFKGDHGPTNEISSAMLFSEARATPLKVIQGQSLARSFTIYVDDPNGKIDDNGRTLSRKVLRWNGHVYLN*
Ga0134123_108307321	3300010403	Terrestrial Soil	FARFNGQDIIEISTGSGGLTPSLTNYYFAIDPHTNQAVPKNLFKGEHGPTNEISSAMLFNDVPATALKVLRGNALARSFTIYVDDEKGKIDDNGRTLSRKILRWNGTLYR*
Ga0134123_109510991	3300010403	Terrestrial Soil	QQIVEVSTGSGGLTPSLTNYYFAIDPNTHQAVPKNLFIDDKKPTNEISSAMLLSDSRATAEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR*
Ga0105246_103057692	3300011119	Miscanthus Rhizosphere	GLTPSLTNYYFVIDPRTKQAVPKNLFRADRGPTNQISSAMLFNATSSMTPLKIIRGNSLAPSFLIYVDSDTGRIDDNGRRLSRKLLRWNGKAYR*
Ga0105246_122889931	3300011119	Miscanthus Rhizosphere	SGGLTPSLTNYYFSIDPRTNHAVPKNLFRGDHGPTNEISSAMLFNATPATTPLKIIRGQSLAPSFIIYTDNERGKIDDNGRTLGRRILRWNGKIYQ*
Ga0157301_102502552	3300012911	Soil	IAFAKLRGEDIIEVSTGSGGLNPTLTNYYFAFDPKTNYAVPKNLFKGEHGLTNEITSAMRFNERFATAPLKVFFGHSLAATFNIYEDNENGKIDDNGRKLSRRLLRWNGKMYR*
Ga0164298_113124991	3300012955	Soil	NGEQIIEVSSWSGGLNPSLTNYYFTIDPQTNHAVPKNLFKGDHGPTNEISSALLFNSASAPLKIVRGQTLAPSFSLYVDDPKGKIDDNGRSLSRKILRWNGKLYR*
Ga0157374_106398612	3300013296	Miscanthus Rhizosphere	VEVSTGSGGLTPSLTNYYFVIDPKTNKAVPKNFFKGDRGPTNQISSAMLFNESRAAATPLKVIQGQSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGSVFR*
Ga0157378_110621081	3300013297	Miscanthus Rhizosphere	STGSGGLTPSLTNYYFVIDPHTHQAVPKNLFIGDHGPTNEISSAMLLSDSRPAAEPLKVIQGQTLARSFIIYVDDANGKINDNGRTLSRNVLRWNGKVFR*
Ga0157378_118235281	3300013297	Miscanthus Rhizosphere	SLTNYYFAIDPRTNHAVPKNLFRGDHGPTNEISSAMLLGATPASEPLKIVRANTLAKSFTIYIDDANGKIDDNGRTLTRKIMHWNGAVYR*
Ga0157378_123649952	3300013297	Miscanthus Rhizosphere	ARSGGEEIIEVATGSGGLTPSLTNYYFVIDPQTKQAVPKNLFRGEHGPTNEISSAMLFNASPASTPLKIIRGQSLAPSFIIYDDNENGKIDDNSRKLSRKILRWNGKGYK*
Ga0163162_107863711	3300013306	Switchgrass Rhizosphere	GGLTPSLTNYYFAIDPRTNHAVPKNLFRGDHGPTNEISSAMLLGATPASEPLKIVRANTLAKNFTIYIDDANGKIDDNGRTLTRKIMHWNGKVYR*
Ga0163162_125835651	3300013306	Switchgrass Rhizosphere	NIAFAKLNAQEIVEVSTGSGGLTPSLTNYYFVIDPKTNEAVPKNFFEGDHGPTNQISSAMLFNESRAAATPLKVIQGQSLARSFIIYVDDPNGKIDDNGRTLSRKVLRWNGSVFR*
Ga0157372_129631242	3300013307	Corn Rhizosphere	YYFVINPQTKHAVPKNLFRGDHGPTNEISSAMLFGATPATTPLKIIRGHSLAPSFIIYIDDETGKIDDNGRKLSRKILRWNGKRYQ*
Ga0157375_124425082	3300013308	Miscanthus Rhizosphere	TNYYFVIDPNTHQAIPKNLFIDDKKPTNEISSAMLLSDSRPASEPLKVIQGQTLARSFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR*
Ga0163163_110625191	3300014325	Switchgrass Rhizosphere	LNAQQIVEVSTGSGGLTPTLTNYYFVIDPKTNQAIPKNFFKGDRGPTNEISSAMLFNDVRAAATPLKVIQGQSLARSFLIYVDDANGKIDDNGRTLSRKILRWNGSVYR*
Ga0182008_108288971	3300014497	Rhizosphere	VEVATWSGGLNPTLTNYYFVIDPKTGHAAPKNLFHGDHGPTNEITSALLFNSASAPIRIVRGQTLSRSFSIYVADPNGKIDNNGRTLSRRILRWNGSSYR*
Ga0132256_1036072591	3300015372	Arabidopsis Rhizosphere	NYYFTIDPKTNHAVPKNLFKGEHGPTNEISSAMLFNATPASTPLKIVRGQALTPSFSIYIDDANGKIDDNGRTLSRKILHWNGKLYR*
Ga0132255_1023251732	3300015374	Arabidopsis Rhizosphere	AFARLNGQDIIEISTGSGGLTPSLTNYYFAIDPHTDQAVPKNLFKGEHGPTNEISSAMLFNDVPATALKVLRGNTLARSFTIYVDDEKGKIDDNGRTLSRKIMRWNGTLYR*
Ga0190274_139955911	3300018476	Soil	NYYFTIDPRTNQAIPKKIFRDSRGLTNEISSAMLFNATPATTPLKIIRGQALSPSFIIYVDSDRGKIDDSGRTLSRRVLRWNGKIYQ
Ga0182009_101032164	3300021445	Soil	GSGCLNPSLTNYYFAIDPKTNQAVPKKLFQGEHGPTNEISSAMLFNDTPATAPLKIVKGKALAPSFIVYVDDPKGKINDNDRTLSRRILRWNGSSYR
Ga0182009_107199411	3300021445	Soil	AIDPRTGHAVPRNIFKGDHGPTNEISSAMLLTISGAIEPLKIVRGHALAPRFSIYIDDENGKIDDGGRKLTRKVLRWNGKMYR
Ga0247667_10035355	3300024290	Soil	RTRHAVPKNLFKGEHGPTNEISSSMLFGTTPGGPEPLKIVRGATLSLSFSVYIEDDKGKIDDNGRKFMRKILRWNGKSYQ
Ga0207710_101845641	3300025900	Switchgrass Rhizosphere	GLTPSLTNYYFVIDPNTHQAIPKNLFIDDKKPTNEISSAMLLSDSRAASEPLKVIQGKTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKIYR
Ga0207662_112711451	3300025918	Switchgrass Rhizosphere	LGFARFGGEEIIEVATGSGGLTPSLTNYYFVIDPQTKQAVPKNLFRGDHGPTNEISSAMLFNATPAITPLKIIRGQSLAPSFIIYVDSENGAVDDNGRKLSRKILRWNGKGYR
Ga0207649_116757502	3300025920	Corn Rhizosphere	GGLTPSLTNYYFVIDIHTHRAVPKNLFNGDRGLTNQITSAMLLGEARPAAEPLKVIQSQALARSFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR
Ga0207690_117289681	3300025932	Corn Rhizosphere	STGSGGLTPSLTNYYFVIDPNTHQAIPKNLFIEDKKPTNEISSAMLLSDSRAASEPLKVIRGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWNGKVYR
Ga0207709_113637751	3300025935	Miscanthus Rhizosphere	VSTGSGGLTPSLTNYYFVIDPNTHQAIPKNLFIDDKKPTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR
Ga0207709_114597011	3300025935	Miscanthus Rhizosphere	SLTNYYFVIDPATKQVVPKNLFKGDRGPTNQISSAMLLSDARPAAEPLKLIQGQSLAGSFIIYVDDANGKIDDNGRTLSRKVLRWNGSVYR
Ga0207651_103718991	3300025960	Switchgrass Rhizosphere	AFARFGGEEIIEVATGSGGLTPSLTNYYFVIDPQTKQAVPKNLFRGEHGPTNEMSSAMLFNASPASTPLKIIRGQSLAPSFTIYDDNENGKIDDNGRKLSRKILRWNGKGYR
Ga0207639_112581382	3300026041	Corn Rhizosphere	IDPNSHHAIPKNLFNGDHGPTNEISSAMLLSDSRATVEPLKVIQGQTLARTFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR
Ga0207641_118364891	3300026088	Switchgrass Rhizosphere	NYYFVIDPKTKHAVPKYLFHGDRSHTNEISSAMLFNATPAMTPLKIIRGQSLAPSFIIYDDNENGRIDDNGRKLSRRILRWNGKEYR
Ga0207648_101233363	3300026089	Miscanthus Rhizosphere	NQAVPKNMFRDEHGPTNQISSAMLLEASGAEPLKVVRGNTLAPSFVVYVDSEKGKIEDSGRTLSRKILRWNGNVYR
Ga0207676_108755403	3300026095	Switchgrass Rhizosphere	NPTLTNYYFAFDPKTNYAVPKNLFKGEHGLTNEITSAMRFNERFATAPLKVFFGHSLAATFNIYEDNENGKIDDNGRKLSRRLLRWNGKMYR
Ga0207676_109987331	3300026095	Switchgrass Rhizosphere	TGSGGLTPSLTNYYFVIDPKTKHAVPKYLFHGDRSHTNEISSAMLFNATPAMTPLKIIRGQSLAPSFIIYDDNENGRIDDNGRKLSRRILRWNGKEYR
Ga0207676_120397861	3300026095	Switchgrass Rhizosphere	MRLAKLNSQQLVEVSTGSGGLTPSLTNYYFVIDPNSHHAIPKNLFNGDHGPTNEISSAMLLSDSRATVEPLKVIQGQTLARTFIIYVDDANGKIDDNGRTLSRKSLRWNGRVYR
Ga0207674_112134632	3300026116	Corn Rhizosphere	NYYFVIDPQTKQAVPKNLFRGEHGPTNEISSAMLFNASPASTPLKIIRGQSLAPSFTIYDDNENGKIDDNGRKLSRKILRWNGKGYR
Ga0207674_112359192	3300026116	Corn Rhizosphere	GDDIIEVATGSGGLNPTLTNYYFAIDPNTSTAVPKKLFKGEHGPTNEITSAMLFGNSATPLRIIRGASLAPSFIVYEDDADGKIDDNGRKLSRRILRWNGKMYR
Ga0207674_114585591	3300026116	Corn Rhizosphere	GSGGLTPSLTNYYFVIDPKTKHAVPKYLFHGDRSHTNEISSAMLFNATPAMTPLKIIRGQSLAPSFIIYDDNENGRIDDNGRKLSRRILRWNGKEYR
Ga0310900_116538042	3300031908	Soil	LNTQQNVEVSTGSGGLTPSLTNYYFVIDPNTHQAIPKNLFIDDKKPTNEISSAMLLSDSRAASEPLKVIQGQTLAPTFIIYVDDANGKIDDNGRTLSRKVLRWSGKVYR
Ga0310810_110893581	3300033412	Soil	LTNYYFAIDPKTGHAVPKKLFQGEHGPANEISSAMLFNDTPATAPLKIIRGKALAPSFIVYVDDQKGKINDNDRTLSRRILRWNGSIYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061880

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences