Metagenome / Metatranscriptome Family F061787

Basic Information
Family ID	F061787
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	73 residues
Representative Sequence	MQKQWTLEMHYPGDGKDSLITTDNFDDFAEVERKMKQNREMIFVVKPPADPLAEDLQMLDDLKRSGLKIERS
Number of Associated Samples	101
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.60 %
% of genes near scaffold ends (potentially truncated)	32.82 %
% of genes from short scaffolds (< 2000 bps)	82.44 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (58.015 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (21.374 % of family members)
Environment Ontology (ENVO)	Unclassified (41.221 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.649 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1JGI12270J11330_100205245 2JGIcombinedJ26739_1002224852 3Ga0062387_1002350572 4Ga0070681_108122592 5Ga0066789_103914002 6Ga0066790_100229054 7Ga0075019_102533292 8Ga0075521_102857412 9Ga0075520_10729762 10Ga0075524_102272762 11Ga0134125_102637583 12Ga0136449_1010341362 13Ga0181532_100103943 14Ga0182010_102889371 15Ga0182014_1001631210 16Ga0182014_100525303 17Ga0182014_103179651 18Ga0182014_103339472 19Ga0182013_102287912 20Ga0182013_104312481 21Ga0182016_101391622 22Ga0182012_100254075 23Ga0182012_100330362 24Ga0182012_102797462 25Ga0182024_101188355 26Ga0182024_111050702 27Ga0182021_103954852 28Ga0182021_106102572 29Ga0182021_107961552 30Ga0181522_100357063 31Ga0182030_100109452 32Ga0182030_101694355 33Ga0182030_105747912 34Ga0182030_107568612 35Ga0167669_10666201 36Ga0167663_10817102 37Ga0187809_100870973 38Ga0187887_100825402 39Ga0187859_107719791 40Ga0182031_10205342 41Ga0182031_15051833 42Ga0182031_15503792 43Ga0210396_104290901 44Ga0210385_103272683 45Ga0210383_110205361 46Ga0213853_112125261 47Ga0224526_10822351 48Ga0224527_10510812 49Ga0208714_10019737 50Ga0209584_100542623 51Ga0209585_101843162 52Ga0209773_103363221 53Ga0209517_100038639 54Ga0209624_108193931 55Ga0209006_100853192 56Ga0302144_100844172 57Ga0302147_100722841 58Ga0302152_102792542 59Ga0302267_101052282 60Ga0302224_104277001 61Ga0302202_100366801 62Ga0302269_10330931 63Ga0302231_103032812 64Ga0302266_103656261 65Ga0302189_100128881 66Ga0302197_101256541 67Ga0302154_102563192 68Ga0311368_104639011 69Ga0311368_107954991 70Ga0311327_100883194 71Ga0311369_104443773 72Ga0311361_111219371 73Ga0302141_10582382 74Ga0311347_103157562 75Ga0311347_104594491 76Ga0311347_105921461 77Ga0311340_107986681 78Ga0311371_125344482 79Ga0311346_105449071 80Ga0311346_110746131 81Ga0311346_112622401 82Ga0311331_112234462 83Ga0302277_13141622 84Ga0311332_103829981 85Ga0302188_100634454 86Ga0311334_103183451 87Ga0311334_111634433 88Ga0311336_107740521 89Ga0302276_101307692 90Ga0311339_118458941 91Ga0311337_101343124 92Ga0311337_120429271 93Ga0302175_101065231 94Ga0311344_102206021 95Ga0311344_112774531 96Ga0302286_105983392 97Ga0302191_101427391 98Ga0311333_114329361 99Ga0311333_117147301 100Ga0311349_102850821 101Ga0311349_105930262 102Ga0311360_114713722 103Ga0311353_104020292 104Ga0311370_100767101 105Ga0311370_101689071 106Ga0311370_102700802 107Ga0311370_110450102 108Ga0311370_123147891 109Ga0302192_100636423 110Ga0302275_100998924 111Ga0311354_110026101 112Ga0311345_101952504 113Ga0310038_104590421 114Ga0302310_106001642 115Ga0265762_11650341 116Ga0311366_113456751 117Ga0302180_102043922 118Ga0302323_1015462322 119Ga0302307_100304955 120Ga0265330_100167297 121Ga0302324_1023731221 122Ga0265340_102301592 123Ga0302140_112139721 124Ga0310686_1158166202 125Ga0310686_1188346703 126Ga0302321_1006540062 127Ga0302321_1036301201 128Ga0348332_135873312 129Ga0334828_038070_1115_1384 130Ga0370483_0102454_1_195 131Ga0370493_0070158_915_1100
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1JGI12270J11330_100205245 2JGIcombinedJ26739_1002224852 3Ga0062387_1002350572 4Ga0066790_100229054 5Ga0075019_102533292 6Ga0182010_102889371 7Ga0182014_100525303 8Ga0182014_103339472 9Ga0182013_104312481 10Ga0182012_102797462 11Ga0182030_100109452 12Ga0302231_103032812 13Ga0302141_10582382 14Ga0311347_104594491 15Ga0311347_105921461 16Ga0311346_105449071 17Ga0311346_110746131 18Ga0311337_120429271 19Ga0311333_114329361 20Ga0311370_101689071 21Ga0370493_0070158_915_1100
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1Ga0209584_100542623 2JGI12270J11330_100205245 3Ga0062387_1002350572 4Ga0070681_108122592 5Ga0066789_103914002 6Ga0182014_100525303 7Ga0182014_103179651 8Ga0182024_101188355 9Ga0182024_111050702 10Ga0182021_106102572 11Ga0182021_107961552 12Ga0181522_100357063 13Ga0182030_100109452 14Ga0182030_105747912 15Ga0187887_100825402 16Ga0210385_103272683 17Ga0210383_110205361 18Ga0209624_108193931 19Ga0302224_104277001 20Ga0302231_103032812 21Ga0302197_101256541 22Ga0311347_105921461 23Ga0311340_107986681 24Ga0311346_105449071 25Ga0311346_110746131 26Ga0311346_112622401 27Ga0311334_103183451 28Ga0311336_107740521 29Ga0311337_120429271 30Ga0302175_101065231 31Ga0311333_114329361 32Ga0311333_117147301 33Ga0311370_102700802 34Ga0302310_106001642 35Ga0370493_0070158_915_1100
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.00% β-sheet: 22.00% Coil/Unstructured: 56.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03706	LPG_synthase_TM	19.08
PF00364	Biotin_lipoyl	7.63
PF01145	Band_7	6.87
PF01556	DnaJ_C	4.58
PF13591	MerR_2	3.82
PF03976	PPK2	2.29
PF07568	HisKA_2	1.53
PF01988	VIT1	1.53
PF01425	Amidase	0.76
PF01545	Cation_efflux	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	19.08
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	4.58
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	2.29
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.53
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.53
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.53
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.53
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.53
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.76
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.67 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.38 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.22 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.76 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.76 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3.05 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.76 %
Unclassified	root	N/A	41.98 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	0.76 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.76 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.05 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.76 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.76 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.76 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	5.34 %
Bradyrhizobium huanghuaihaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	0.76 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	0.76 %
Mesorhizobium qingshengii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium qingshengii	3.05 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.76 %
Paraburkholderia phenazinium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia phenazinium	0.76 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.76 %
Unclassified	root	N/A	41.98 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	0.76 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	5.34 %
Bradyrhizobium huanghuaihaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	0.76 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-1	0.76 %
Marinobacter sp. LV10R510-11A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp. LV10R510-11A	0.76 %
Mesorhizobium qingshengii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium qingshengii	3.05 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.76 %
Paraburkholderia phenazinium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia phenazinium	0.76 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.76 %
Unclassified	root	N/A	41.98 %

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10020524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4099	Open in IMG/M
3300002245\|JGIcombinedJ26739_100222485	Not Available	1779	Open in IMG/M
3300004091\|Ga0062387_100235057	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005458\|Ga0070681_10812259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300005994\|Ga0066789_10391400	Not Available	580	Open in IMG/M
3300005995\|Ga0066790_10022905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2727	Open in IMG/M
3300006086\|Ga0075019_10253329	Not Available	1051	Open in IMG/M
3300006642\|Ga0075521_10285741	Not Available	793	Open in IMG/M
3300006795\|Ga0075520_1072976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1599	Open in IMG/M
3300006950\|Ga0075524_10227276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M

Showing 1 to 10 of 131 entries

Previous1 2 3 4 5…14Next

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.47%
Host-Associated	Host-Associated	1.53%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	6.87%
Plants	Host-Associated → Plants	1.53%
Terrestrial	Environmental → Terrestrial	91.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Peat	Environmental → Terrestrial → Peat	52.67%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.53%
Sediment	Environmental → Aquatic → Sediment	0.76%
Soil	Environmental → Terrestrial → Soil	38.17%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	3.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	52.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.34%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.29%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	19.08%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	52.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.58%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	21.37%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	12.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	14.50%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.53%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.29%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.53%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M

Showing 1 to 10 of 101 entries

Previous1 2 3 4 5…11Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100205245	3300000567	Peatlands Soil	MEVTMQKQWKLEMHYPGDGQDSLITTDSFDDFAEVERKIKQNREMVFLVKPPAAPLAEDLQMLDDLRKSGLKIERS*
JGIcombinedJ26739_1002224852	3300002245	Forest Soil	MQKQWKVEMRYPGDKIDSLITTDRFDDFADVERKIKQNREMVFVVEPPSAPSKNHLRLLEELKQSGLKIEL*
Ga0062387_1002350572	3300004091	Bog Forest Soil	MQKQWTLEMHHPGDAGDSLITTDRFDEFSEVERKIKQNREMAFVVKPPSSPLAGELRMLDELKQSGLRIKRS*
Ga0070681_108122592	3300005458	Corn Rhizosphere	MQKQWTLEMHYPGDGKDSLITSDSFDDFADVELKIKQNREMVFIVKPPTAPLIEDLRMLDELKKSGLKIERP*
Ga0066789_103914002	3300005994	Soil	MQKQWTVEMHYPGNREDSLITTDRFDDFAEVERKIKQNREMVFVVKPPAAPPAGELQMLDDLKKSGLKIERP*
Ga0066790_100229054	3300005995	Soil	MHYPGNREDSLITTDRFDDFAEVERKIKQNREMVFVVKPPAAPLAGELQMLDDLRKSGLKIDRP*
Ga0075019_102533292	3300006086	Watersheds	MQKQWTLEMHYPGDGKDSLITTDNFDDFADVERKIKQNREMVFVVKPPDSSSTEDLRLLDDLKKSRLKIGRL*
Ga0075521_102857412	3300006642	Arctic Peat Soil	MQKQWTLEMHYPGDGKDSLITTDNFDDFAEVERKMKQNREMVFVVKPPAVPLTEDLQMLDDLKRSGLKIERS*
Ga0075520_10729762	3300006795	Arctic Peat Soil	MQKQWTLEMHYPGDGKDSLITTDNFDDFAEVERKMKQNREMVFVVKPPADSLTEDLQMLDDLKRSGLKIERS*
Ga0075524_102272762	3300006950	Arctic Peat Soil	MQKQWTLEMHYPSDGKDSLITTDNFDDFADVERKMKQNREMIFVVKPPADPLMEDLQVLDDLKRSGLKIERS*
Ga0134125_102637583	3300010371	Terrestrial Soil	MLHRQWGEVEMQKQWTLEMHYPGDGKDSLITSDSFDDFADVELKIKQNREMVFIVKPPTAPLIEDLRMLDELKKSGLKIERP*
Ga0136449_1010341362	3300010379	Peatlands Soil	MEITMQKQWTLEMHYPGDGQDSLITTDSFDDFAEVERKIKQNREMVFVVKPPAVPLAEDLQMLDDLRKSGLKIERP*
Ga0181532_100103943	3300014164	Bog	MQKQWKLEMHYPGGGQDSLIATDSFDDFAEVERKIKQNREMVFVVKPPAAPLTEDLRMLDDLRKSGLKIERP*
Ga0182010_102889371	3300014490	Fen	MALPRHCCAVHGSITKGEVTMQKQWTLEMHYPGDGKDSLISRDSFDDFAAVERKMKLNREMVFVVKPPAAPLTEDLRMLDDLKKSGLKIE*
Ga0182014_1001631210	3300014491	Bog	MHYSGDGKDSLITTDNFDDFAAVEQKIKQNREMVFGVKPPDAPLTEDLRLLDDLKKSGLKIERL*
Ga0182014_100525303	3300014491	Bog	MQKQWTLEMHYPGDGSNSLIGTRNFDNFAGVERKMKQNREMVFVVKPPADALTGDLQMLDELKMSGLKIERS*
Ga0182014_103179651	3300014491	Bog	AVHGSITKGEVTMQKQWTLEMHYPGDGKDSLISRDSFDDFAAVERKMKLNREMVFVVKPPAAPLTEDLRMLDDLKKSGLKIE*
Ga0182014_103339472	3300014491	Bog	LRRLFHHQKKGFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL*
Ga0182013_102287912	3300014492	Bog	QKQWTLEMHYPGDGSNSLIGTRNFDNFAGVERKMKQNREMVFVVKPPADALTGDLQMLDELKMSGLKIERS*
Ga0182013_104312481	3300014492	Bog	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFMVKPPVAPLAGDLQMLDDLKNSGLKIEGP*
Ga0182016_101391622	3300014493	Bog	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP*
Ga0182012_100254075	3300014499	Bog	MKDQWTLEMHYPGNGVDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP*
Ga0182012_100330362	3300014499	Bog	MQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL*
Ga0182012_102797462	3300014499	Bog	MLEMHYPGGGPDSLITSDNFDDSAEVERKIRQHREMVFVVKPPAAALTQDLRMLDDLKKSGLKIERP*
Ga0182024_101188355	3300014501	Permafrost	LQRRCFAAHGFIIGKREVTMQKLWKLEMHYPGGGKDSLIATDSFDDFAEVKRKIKQNREMVFVVKPPAAPLTEDLRMLDHLKKSGLKIERS*
Ga0182024_111050702	3300014501	Permafrost	MQKQWTLEMYYPGDGKDSLITTDNFDDFADIERKIKQNREMVFVVKPPDAPLTEDLRLLDDLKKSGLKIERL*
Ga0182021_103954852	3300014502	Fen	MQKQWTLEMHYPGDGKDSLITTDNFDDFAEVERKMKQNREMVFVVKPPADPLTEDLQILDDLKRSGLKIERS*
Ga0182021_106102572	3300014502	Fen	MQKQWTLEMHYPGDCKDSLITTDSFDNFSEVERKMKQNREMVFVVKPPAAPLTEDLRLLDDLKTSGLKIERS*
Ga0182021_107961552	3300014502	Fen	MQTQWTLEMHYPGDGKDSLITTDNFDDFADVERKIKQNREMVFVVKPPVAPLTEDLRLLDDLKRSGLKIGQP*
Ga0181522_100357063	3300014657	Bog	MQSQWTLEMHYPGGGQDSLITTDSFDDFAEVERKIKQNREMLFVVKPPAAPLTEDLRMLDDLKRSGLKIEQP*
Ga0182030_100109452	3300014838	Bog	VAHGFIIGREVTMQKQWKLEMHYPGGDQDSLIATDSFDDFAEVERKMKQNREMVFVVKPPAAPLTEDLRMLDGCD*
Ga0182030_101694355	3300014838	Bog	MQKQWTLEMHHPGNAGDSLITTDRFDEFSEVERKIKQNREMVFVVKPPTEPLAGELRMLDELKKSGSKIERR*
Ga0182030_105747912	3300014838	Bog	MQNQWKLEMHYPGGGEDSLIATDRFDDFSQVERKIKQNREMVFVVKPPAAPLTEDLRMLDDLKKSGLKIERP*
Ga0182030_107568612	3300014838	Bog	MQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS*
Ga0167669_10666201	3300015024	Glacier Forefield Soil	MQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS*
Ga0167663_10817102	3300015202	Glacier Forefield Soil	LLCDPLFLTKKGFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS*
Ga0187809_100870973	3300017937	Freshwater Sediment	MQKQWKLEMHYPGGGQDSLIATDSFDDFAEVERKIKQNREMVFVVKPPAAPLTEDLRMLDDLKKSGLKIERP
Ga0187887_100825402	3300018043	Peatland	MQKQWTLEMHYSGDGKDSLITTDNFDDFADVERKIKQNREMVFVVKPPAVPLAEDLQMLNDLRKSGLKIERS
Ga0187859_107719791	3300018047	Peatland	MQKQWTLEMHHPGDAEDSLITTDRFDEFSEVERKIKQNREMVFVVKPPASPLAGELRILDNLKQSGLRIERS
Ga0182031_10205342	3300019787	Bog	MQKQWKLEMHYPGGDQDSLIATDSFDDFAEVERKMKQNREMVFVVKPPAAPLTEDLRMLDGCD
Ga0182031_15051833	3300019787	Bog	MQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0182031_15503792	3300019787	Bog	MELAMQKQWTLEMHHPGNRGDSLITTDRFDDFSEVERKIKQNREMVFVVKTPAVPLAGELRMLDDLKNSGLKIERS
Ga0210396_104290901	3300021180	Soil	MHHPGDAGDSLITTDRFDEFSEVERKIKQNREMVFVVKPPASPLARELRMLDDLKQSGLKIERS
Ga0210385_103272683	3300021402	Soil	ELAMQKQWTLEMHHPGNRRDSLITTDRFDEFSEVERKIKQNREMIFVVKPPVAPLAGELRMLDDLKNSGLKIERS
Ga0210383_110205361	3300021407	Soil	MQRQWTLEMHYPGYGTDSLITTDTFDDFAEVERKIKQNREMVFFVKPPAAPLTADLRMLDDLKKSGLKIERP
Ga0213853_112125261	3300021861	Watersheds	PMAPSPEGEVTMQRQWTLEMHYSGDGKDSLITTDNFDDFADVERKIKQNREMVFIVKPPAAPLAEDLQMLDDLRKSGLKIERS
Ga0224526_10822351	3300022872	Soil	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKDSGLKIEGP
Ga0224527_10510812	3300022877	Soil	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0208714_10019737	3300025527	Arctic Peat Soil	MHYPGDGTDSLITTDNFDDFADVERKIKQNREMVFVIKPPDAPLTEDLRLLDDLKKSGLKIERL
Ga0209584_100542623	3300025878	Arctic Peat Soil	MQKQWTLEMHYPGDGKDSLITTDNFDDFAEVERKMKQNREMIFVVKPPADPLAEDLQMLDDLKRSGLKIERS
Ga0209585_101843162	3300025891	Arctic Peat Soil	MQKQWTLEMHYPSDGKDSLITTDNFDDFADVERKMKQNREMIFVVKPPADPLMEDLQVLDDLKRSGLKIERS
Ga0209773_103363221	3300027829	Bog Forest Soil	MQKQWTLEMHHPGDAGDSLITTDRFDEFSEVERKIKQNREMAFVVKPPSSPLAGELRMLDELKQSGLRIKRS
Ga0209517_100038639	3300027854	Peatlands Soil	MQKQWKLEMHYPGDGQDSLITTDSFDDFAEVERKIKQNREMVFLVKPPAAPLAEDLQMLDDLRKSGLKIERS
Ga0209624_108193931	3300027895	Forest Soil	QLRLCANTGSIIIKENVAMQKQWKVEMRYPGDKIDSLITTDRFDDFADVERKIKQNREMVFVVEPPSAPSKNHLRLLEELKQSGLKIEL
Ga0209006_100853192	3300027908	Forest Soil	MQKQWKVEMRYPGDKIDSLITTDRFDDFADVERKIKQNREMVFVVEPPSAPSKNHLRLLEELKQSGLKIEL
Ga0302144_100844172	3300028560	Bog	KGRVKMQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0302147_100722841	3300028566	Bog	FHHQKKGFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0302152_102792542	3300028572	Bog	GRVKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0302267_101052282	3300028745	Bog	MQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0302224_104277001	3300028759	Palsa	MKDQWTLEMHYPGNGVDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0302202_100366801	3300028762	Bog	MQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0302269_10330931	3300028766	Bog	GFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0302231_103032812	3300028775	Palsa	SSCFAVYGSVTKMELAMQKQWTLEMHHPGDAEDSLITTDRFDEFSEVERKIKQNREMVFVVKPPASPLAGELRMLDDLKQSGSKIERR
Ga0302266_103656261	3300028779	Bog	LEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKDSGLKIEGP
Ga0302189_100128881	3300028788	Bog	LEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0302197_101256541	3300028873	Bog	KGFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0302154_102563192	3300028882	Bog	QKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0311368_104639011	3300029882	Palsa	MHYPGDAEDSLITTNRFDKFSEVERKIKQNREMVFVVKPPAGPLAGELQVLDDLKTSGSK
Ga0311368_107954991	3300029882	Palsa	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFMVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0311327_100883194	3300029883	Bog	KGRVKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0311369_104443773	3300029910	Palsa	MHYPGDAEDSLITTNRFDKFSEVERKIKQNREMVFVVKPPAGPLAGELQVLDDLKTSGSKIEQR
Ga0311361_111219371	3300029911	Bog	ITPLRGPLLRRHREVEMQKQWTLEMHYPGDGSNSLIGTRNFDNFAGVERKMKQNREMVFVVKPPADALTGDLQMLDELKMSGLKIERS
Ga0302141_10582382	3300029919	Bog	MHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0311347_103157562	3300029923	Fen	MQKQWTLEMHYPGNDGDSLVTTDNFDDFAEVERKMKQNREMVFVVKPPAAPLAEELRMLDDLKNSGLKI
Ga0311347_104594491	3300029923	Fen	MHSWILEMHHPGGGANSLITTDDFYEFADVERKMKQNREMVFVVKPPAEPLPEELRMLDELRTAGLKIERL
Ga0311347_105921461	3300029923	Fen	MRTQWILEMHHPGDRKDSLITTDEFDDFAEVERKIKQNREMVFVVKPPAAPLSGQLQMLDDLRNSGSKIEGPQGADIHESRKAVSPTQK
Ga0311340_107986681	3300029943	Palsa	MELAMQKQWTLEMHHPGDAGDSLITIDCFDDFSEVEEKIKQNREMVFVVKPPAAPLAGELRMLDDLKNSGSKIERP
Ga0311371_125344482	3300029951	Palsa	KDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0311346_105449071	3300029952	Bog	MRTRWILEMQYPEGGQDSLLTTDRFKDFSDVERKVKQNREMIFVVTTPSAPLPEDMLMLDVLKRSGLKIELVQS
Ga0311346_110746131	3300029952	Bog	MQKHWTLEMHHPGGGRDSPITIDNFNDFAEVELKMKQNREMVFVVKPPADPLTQDLLILDELKRSGLKIE
Ga0311346_112622401	3300029952	Bog	MQKQWKLEMHYPGGGEDSLIATDSFDDFAEVERKIRQHREMVFVVKPPAAALTQDLRMLDDLKKSGLKIERP
Ga0311331_112234462	3300029954	Bog	MQKHWTLEMHHPGGGRDSPITIDNFNDFAEVELKMKQNREMVFVVKPPADPLTQDLLILDELKRS
Ga0302277_13141622	3300029982	Bog	SDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0311332_103829981	3300029984	Fen	MMRTQWILEMHHPGDRKDSLITTDKFDEFAEVERKIKQNREMVFVVKPPAAPLPGELRMLDDLRNSGLKIERP
Ga0302188_100634454	3300029986	Bog	WTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0311334_103183451	3300029987	Fen	MQQQWILEMHHPGENGDSLITTSKFDEFAEVERKIKQNREMVFVVKPPAGPLPGELRMLDDLRNSGLKIRRP
Ga0311334_111634433	3300029987	Fen	MRTQWILEMHHPGDRKDSLITTDKFDEFAEVERKIKQNREMVFVVKPPAAPLPGELRMLDDLRNSGLKIERP
Ga0311336_107740521	3300029990	Fen	FRRHQHLDLTMHRRLILEMHHPGGDANSLITTDDFYEFADVERKMKQNREMAFVVKPPAAPLPGELRMLDELRTAGLKIERL
Ga0302276_101307692	3300029992	Bog	MHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0311339_118458941	3300029999	Palsa	TMKNQWTLEMHYPGNGVDSLLTTNNFDAFAGVKRKIKLNREMVFVVKPPVAPLAEDLQMLDDLKSSGLKIEGP
Ga0311337_101343124	3300030000	Fen	MHRRWILEMHHPGGDANSLITTDDFYEFADVERKMKQNREMAFVVKPPAAPLPGELRMLDELRTAGLKIERL
Ga0311337_120429271	3300030000	Fen	SPDYSLRLRRYRRSMMRTQWILEMHHPGDRKDSLITINKFDEFAEVERKIKQNREMVFVVKPPAAPLPEELRMLDNLRHSGLKIERH
Ga0302175_101065231	3300030014	Fen	PLDLTMQKQWTLEMHYPGNDGDSLVTTDNFDDFAEVERKMKQNREMVFVVKPPAAPLAEELRMLDDLKNSGLKIERA
Ga0311344_102206021	3300030020	Bog	MQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0311344_112774531	3300030020	Bog	EMHYPGGGPDSLITTDNFDDFAEVERKIRQHREMVFVVKPPAAALTQDLRMLDDLKKSGLKIERP
Ga0302286_105983392	3300030047	Fen	MHHPGGDANSLITTDDFYEFADVERKMKQNREMAFVVKPPAAPLPGELRMLDELRTAGLKIERL
Ga0302191_101427391	3300030049	Bog	MQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFIKPPTDPLAEDLRLLDHLEASGLKIERL
Ga0311333_114329361	3300030114	Fen	MRTQWILEMHHPGDRKDSLITTDKFEEFAEVELKIKQNREMVFVVKPPAAPLPGELRMLNDLRNSGLKIERP
Ga0311333_117147301	3300030114	Fen	MNAQWILEMHHPGESGDSLITTDKFDDFAEVERKIKENREMVFVVKPSGAPLPGELRMLDELRNSGLKIERL
Ga0311349_102850821	3300030294	Fen	MQKQWTLEMHYPGNDGDSLVTTDNFDDFAEVERKMKQNREMVFVVKPPAAPLAEELRMLDDLKNSGLKIERA
Ga0311349_105930262	3300030294	Fen	MHERWILEMHHPGGGRNSLITTDDFNEFSDVERKMKQNREMAFVVKPPAAPLPGELRMLDELRTAGLKIERL
Ga0311360_114713722	3300030339	Bog	MRTQWILEMHHPGDRKDSLITTDEFDDFADVERKIKQNREMVFVVKPPAAPLPGELRMLDDLRNSGLKVERP
Ga0311353_104020292	3300030399	Palsa	MHHPGDAGDSLITIDCFDDFSEVEEKIKQNREMVFVVKPPAAPLAGELRMLDDLKNSGSKIERP
Ga0311370_100767101	3300030503	Palsa	MKDQWTLEMHYPGNGVDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIE
Ga0311370_101689071	3300030503	Palsa	MHHPGDAGDSLITIDCFDDFSEVEEKIKQNREMVFVVKPPAAPLAGELRMLDDLKNSG
Ga0311370_102700802	3300030503	Palsa	MQKQWTLEMHHPGDAGDSLITTDRFDDFSEVERKIRQNREMVFVVRPPASSVAGELRMLDNLKQFGLRIERS
Ga0311370_110450102	3300030503	Palsa	MKNQWTLEMHYPGNGVDSLLTTDNFDAFAGVKRKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0311370_123147891	3300030503	Palsa	MKNQWTLEMHYPGNGVDSLLTTNNFDAFAGVKRKIKLNREMVFVVKPPVAPLAEDLQMLDDLKSSGLKIEGP
Ga0302192_100636423	3300030507	Bog	MQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIER
Ga0302275_100998924	3300030518	Bog	CFITKKRFKMQKQWTLEMHYPSDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0311354_110026101	3300030618	Palsa	MKNQWTLEMHYPGNGVDSLLTTDNFDAFAGVKRKINLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0311345_101952504	3300030688	Bog	FITKKGFKMQKQWTLEMHYPGDGKDSLITTDRFDDFAEVERKMKLNREMIFFVKPPTDPLAEDLRLLDHLEASGLKIERS
Ga0310038_104590421	3300030707	Peatlands Soil	MEVTMQKQWKLEMHYPGDGQDSLITTDSFDDFAEVERKIKQNREMVFLVKPPAAPLAEDLQMLDDLRKSGLKIERS
Ga0302310_106001642	3300030737	Palsa	GRDSATKMELVMQKQWILEMHYPGDAEDSLITTNRFDKFSEVERKIKQNREMVFVVKPPAGPLAGELQVLDDLKTSGSKIEQR
Ga0265762_11650341	3300030760	Soil	MQKQWTLEMHHPGDAEDSLITTDRFDEFSEVERKIKQNREMVFVVKPPASPLAGELRMLDDLRQSGLKIELS
Ga0311366_113456751	3300030943	Fen	MHHPGGDANSLITTDDFYEFADVERKMKQNREMEFVVKPPAAPLPAELRMLEKLRTAGLKIERL
Ga0302180_102043922	3300031028	Palsa	MKDQWTLEMHYPGNGVDSLLTTNNFDAFAGVKRKIKLNREMVFVVKPPVAPLAEDLQMLDDLKSSGLKIEGP
Ga0302323_1015462322	3300031232	Fen	MRTQWILEMHHPGDRKDSLITTDKFDEFVEVERKIKQNREMIFVVKPPAAPLPGELRMLDDLRNSGLKIERP
Ga0302307_100304955	3300031233	Palsa	DPTMKDQWTLEMHYPGNGVDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAGDLQMLDDLKNSGLKIEGP
Ga0265330_100167297	3300031235	Rhizosphere	MQKQWILEMHYPGDGTDSLITTDNFDDFADVERKIKQNREMVFVIKPPDAPLTEDLRLLDDLKKSGLKIERL
Ga0302324_1023731221	3300031236	Palsa	MKDQWTLEMHYPGNGIDSLLTTDNFDAFAGVERKIKLNREMVFVVKPPVAPLAEDLQMLDDLKSSGLKIEGP
Ga0265340_102301592	3300031247	Rhizosphere	NMETQWTLEMHYPGDGKDSLITTDNFDDFADVERKIKQNREMVFVVKPPDAPLTEDLRLLDDLKRSELKIGQP
Ga0302140_112139721	3300031261	Bog	MHRQWMLEMHYPGGGPDSLITTDNFDDFAEVERKIRQHREMVFVVKPPAAALTQDLRMLDDLKKSG
Ga0310686_1158166202	3300031708	Soil	MQKQWTLEMHHPGDAGDSLITTDRFDEFSEVERKIKQNREMVFVVEPPASPLAGELRMLDDLKTSGSKIERR
Ga0310686_1188346703	3300031708	Soil	MQKQWKVEMRYTGDKIDSLITTDRFDDFADVERKIKQNREMVFVVEPPSAPSKNDLRLLEELKQSGLKIEL
Ga0302321_1006540062	3300031726	Fen	MERAMRKQWTLEMHYPGNPEDSLITTDRFDDFAEVERKIKQNREMVFVVKPPAAPLAGELQMLDELKNSGLKIERP
Ga0302321_1036301201	3300031726	Fen	MMRTQWILEMHHPGDRKDSLITTDEFDDFAEVERKIKQNREMVFVVKPPAGPLPGELRMLDDLRNSGLKIRRP
Ga0348332_135873312	3300032515	Plant Litter	MQKQWTLEMHHPGDARDSLITTDRFDEFSEVERKIKQNREMVFVVEPPASPLAGELRMLDDLKKSGSKIERR
Ga0334828_038070_1115_1384	3300033822	Soil	MALPRHCCAVHGSITKGEVTMQKQWTLEMHYPGDGKDSLISRDSFDDFAAVERKMKLNREMVFVVKPPAAPLTEDLRMLDDLKKSGLKIE
Ga0370483_0102454_1_195	3300034124	Untreated Peat Soil	MQKQWKLEMHYPGGGQDSLIATDSFDDFAEVERKIKQNREMVFVVKPPPAPLTEDLRMLDDLKTS
Ga0370493_0070158_915_1100	3300034129	Untreated Peat Soil	MQRQWTLEMHYPGRGKDSLIATDNFDDFAEVERKIKQNREMVFVVKPPADPLTQDLLMLDDL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061787

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences