Metagenome Family F061761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061761
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	118 residues
Representative Sequence	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP
Number of Associated Samples	103
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.54 %
% of genes near scaffold ends (potentially truncated)	39.69 %
% of genes from short scaffolds (< 2000 bps)	82.44 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.725 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.687 % of family members)
Environment Ontology (ENVO)	Unclassified (51.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.519 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.37% β-sheet: 0.00% Coil/Unstructured: 44.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02880	PGM_PMM_III	38.17
PF00408	PGM_PMM_IV	27.48
PF12695	Abhydrolase_5	3.05
PF03853	YjeF_N	1.53
PF00380	Ribosomal_S9	1.53
PF14230	DUF4333	1.53
PF12740	Chlorophyllase2	1.53
PF07224	Chlorophyllase	0.76
PF00572	Ribosomal_L13	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	65.65
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	65.65
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	1.53
COG0103	Ribosomal protein S9	Translation, ribosomal structure and biogenesis [J]	1.53
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.73 %
Unclassified	root	N/A	44.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.73 %
Unclassified	root	N/A	44.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.73 %
Unclassified	root	N/A	44.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.22 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.22 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	30.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	30.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	27.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	6.11 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	2.29 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	2.29 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	1.53 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	6.11 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	2.29 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	2.29 %
Pseudonocardia sp. CNS-139	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	1.53 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005328\|Ga0070676_10396176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	959	Open in IMG/M
3300005329\|Ga0070683_100530898	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005330\|Ga0070690_101214212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	602	Open in IMG/M
3300005331\|Ga0070670_100728544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	893	Open in IMG/M
3300005331\|Ga0070670_100781441	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005333\|Ga0070677_10343913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	771	Open in IMG/M
3300005335\|Ga0070666_10566900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	827	Open in IMG/M
3300005337\|Ga0070682_100798242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	767	Open in IMG/M
3300005338\|Ga0068868_101351998	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005338\|Ga0068868_101647365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	604	Open in IMG/M
3300005339\|Ga0070660_100277290	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300005344\|Ga0070661_100126995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1914	Open in IMG/M
3300005345\|Ga0070692_10038606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2434	Open in IMG/M
3300005354\|Ga0070675_100277952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1471	Open in IMG/M
3300005356\|Ga0070674_100343399	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005366\|Ga0070659_100086727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2505	Open in IMG/M
3300005366\|Ga0070659_100606994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	941	Open in IMG/M
3300005367\|Ga0070667_100817101	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005435\|Ga0070714_100882998	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005435\|Ga0070714_100962422	Not Available	830	Open in IMG/M
3300005437\|Ga0070710_10412243	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005456\|Ga0070678_102029000	Not Available	544	Open in IMG/M
3300005466\|Ga0070685_10454805	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005535\|Ga0070684_100371637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1316	Open in IMG/M
3300005535\|Ga0070684_101614622	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005547\|Ga0070693_100992257	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005547\|Ga0070693_101121131	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005548\|Ga0070665_100659399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1059	Open in IMG/M
3300005548\|Ga0070665_102140902	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005577\|Ga0068857_100257675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1600	Open in IMG/M
3300005614\|Ga0068856_100421694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1354	Open in IMG/M
3300005617\|Ga0068859_100229350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1945	Open in IMG/M
3300005617\|Ga0068859_101430791	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300005618\|Ga0068864_100151744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2099	Open in IMG/M
3300005718\|Ga0068866_10086715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1695	Open in IMG/M
3300005841\|Ga0068863_100833514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	921	Open in IMG/M
3300005842\|Ga0068858_100228022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1765	Open in IMG/M
3300005844\|Ga0068862_101420575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	698	Open in IMG/M
3300006028\|Ga0070717_10346338	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006028\|Ga0070717_10666541	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300006028\|Ga0070717_10989199	Not Available	766	Open in IMG/M
3300006755\|Ga0079222_10033309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2228	Open in IMG/M
3300006804\|Ga0079221_10123483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1312	Open in IMG/M
3300006806\|Ga0079220_11120499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	640	Open in IMG/M
3300006806\|Ga0079220_11301285	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006880\|Ga0075429_100318160	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300006881\|Ga0068865_100069665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2490	Open in IMG/M
3300009148\|Ga0105243_10490367	Not Available	1162	Open in IMG/M
3300009148\|Ga0105243_10861060	Not Available	898	Open in IMG/M
3300009156\|Ga0111538_11030999	Not Available	1041	Open in IMG/M
3300010371\|Ga0134125_12852463	Not Available	525	Open in IMG/M
3300010373\|Ga0134128_11318988	Not Available	795	Open in IMG/M
3300010373\|Ga0134128_12015489	Not Available	636	Open in IMG/M
3300010396\|Ga0134126_10621160	Not Available	1235	Open in IMG/M
3300010396\|Ga0134126_11102010	Not Available	886	Open in IMG/M
3300010399\|Ga0134127_12591462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300010399\|Ga0134127_13100310	Not Available	542	Open in IMG/M
3300010401\|Ga0134121_12505446	Not Available	558	Open in IMG/M
3300010403\|Ga0134123_11168641	Not Available	798	Open in IMG/M
3300011119\|Ga0105246_10603993	Not Available	948	Open in IMG/M
3300012958\|Ga0164299_10610035	Not Available	748	Open in IMG/M
3300012985\|Ga0164308_10468056	Not Available	1047	Open in IMG/M
3300012986\|Ga0164304_10049568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	2279	Open in IMG/M
3300012988\|Ga0164306_10679115	Not Available	816	Open in IMG/M
3300012989\|Ga0164305_10054085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2367	Open in IMG/M
3300013105\|Ga0157369_10691022	Not Available	1051	Open in IMG/M
3300013296\|Ga0157374_10288984	Not Available	1620	Open in IMG/M
3300014325\|Ga0163163_11613689	Not Available	709	Open in IMG/M
3300014325\|Ga0163163_11716641	Not Available	688	Open in IMG/M
3300014968\|Ga0157379_10874309	Not Available	851	Open in IMG/M
3300014969\|Ga0157376_11317516	Not Available	752	Open in IMG/M
3300014969\|Ga0157376_12287436	Not Available	580	Open in IMG/M
3300017792\|Ga0163161_10045533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3164	Open in IMG/M
3300017965\|Ga0190266_10556922	Not Available	683	Open in IMG/M
3300017965\|Ga0190266_10782764	Not Available	609	Open in IMG/M
3300018476\|Ga0190274_10082042	Not Available	2486	Open in IMG/M
3300025899\|Ga0207642_10173654	Not Available	1168	Open in IMG/M
3300025901\|Ga0207688_10005188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	7082	Open in IMG/M
3300025901\|Ga0207688_10510730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300025907\|Ga0207645_10676198	Not Available	701	Open in IMG/M
3300025908\|Ga0207643_10015204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	4188	Open in IMG/M
3300025908\|Ga0207643_10539010	Not Available	748	Open in IMG/M
3300025909\|Ga0207705_10056303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2835	Open in IMG/M
3300025920\|Ga0207649_10828529	Not Available	723	Open in IMG/M
3300025920\|Ga0207649_11327242	Not Available	569	Open in IMG/M
3300025923\|Ga0207681_10884664	Not Available	748	Open in IMG/M
3300025925\|Ga0207650_10038209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3504	Open in IMG/M
3300025926\|Ga0207659_10634622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	912	Open in IMG/M
3300025929\|Ga0207664_11877218	Not Available	522	Open in IMG/M
3300025932\|Ga0207690_10050189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2784	Open in IMG/M
3300025933\|Ga0207706_10020387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	5961	Open in IMG/M
3300025934\|Ga0207686_10277353	Not Available	1236	Open in IMG/M
3300025936\|Ga0207670_10079275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-139	2292	Open in IMG/M
3300025937\|Ga0207669_10109908	Not Available	1845	Open in IMG/M
3300025938\|Ga0207704_10523002	Not Available	960	Open in IMG/M
3300025939\|Ga0207665_10252271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304	Open in IMG/M
3300025944\|Ga0207661_12030997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300025945\|Ga0207679_11042233	Not Available	750	Open in IMG/M
3300025961\|Ga0207712_11773765	Not Available	553	Open in IMG/M
3300025981\|Ga0207640_10728626	Not Available	853	Open in IMG/M
3300025986\|Ga0207658_10025065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4175	Open in IMG/M
3300026023\|Ga0207677_11982705	Not Available	541	Open in IMG/M
3300026075\|Ga0207708_11429415	Not Available	607	Open in IMG/M
3300026088\|Ga0207641_10274576	Not Available	1583	Open in IMG/M
3300026088\|Ga0207641_10720549	Not Available	983	Open in IMG/M
3300026095\|Ga0207676_10673585	Not Available	1000	Open in IMG/M
3300026095\|Ga0207676_10969979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836	Open in IMG/M
3300026116\|Ga0207674_10245245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	1738	Open in IMG/M
3300026118\|Ga0207675_100093678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2826	Open in IMG/M
3300026121\|Ga0207683_11658656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300026142\|Ga0207698_11348202	Not Available	728	Open in IMG/M
3300027725\|Ga0209178_1161993	Not Available	777	Open in IMG/M
3300028379\|Ga0268266_10867676	Not Available	872	Open in IMG/M
3300028587\|Ga0247828_10769662	Not Available	607	Open in IMG/M
3300028587\|Ga0247828_11116990	Not Available	523	Open in IMG/M
3300028596\|Ga0247821_10026300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3118	Open in IMG/M
3300028707\|Ga0307291_1155264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300028744\|Ga0307318_10312189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300028778\|Ga0307288_10142908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300028790\|Ga0307283_10023892	Not Available	1313	Open in IMG/M
3300028790\|Ga0307283_10252981	Not Available	519	Open in IMG/M
3300028812\|Ga0247825_10104823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1915	Open in IMG/M
3300028824\|Ga0307310_10495619	Not Available	615	Open in IMG/M
3300028889\|Ga0247827_10213628	Not Available	1075	Open in IMG/M
3300030336\|Ga0247826_10007826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	4159	Open in IMG/M
3300030336\|Ga0247826_10022475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3037	Open in IMG/M
3300030336\|Ga0247826_10126600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	1642	Open in IMG/M
3300032013\|Ga0310906_10523832	Not Available	806	Open in IMG/M
3300032074\|Ga0308173_11531413	Not Available	627	Open in IMG/M
3300033550\|Ga0247829_10116392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.96%
Environmental	Environmental	45.04%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.96%
Terrestrial	Environmental → Terrestrial	45.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.66%
Roots	Host-Associated → Plants → Roots	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.61%
Loam	Environmental → Terrestrial → Soil → Loam	15.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070676_103961762	3300005328	Miscanthus Rhizosphere	VGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0070683_1005308982	3300005329	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMTDPPTP*
Ga0070690_1012142122	3300005330	Switchgrass Rhizosphere	WCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPEADPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0070670_1007285441	3300005331	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0070670_1007814412	3300005331	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0070677_103439132	3300005333	Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0070666_105669001	3300005335	Switchgrass Rhizosphere	LHDTAGRAARLAVTVAIDWLDPDGQAWAARIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0070682_1007982422	3300005337	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0068868_1013519981	3300005338	Miscanthus Rhizosphere	QWCLEATELLRDTAVRAARLASAVAVDWLDPDGQAWSERINTLRHDLDAAAYAADDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIASCRTRPRPDARGGAC*
Ga0068868_1016473651	3300005338	Miscanthus Rhizosphere	GGGGRPRSGERPSTHRGPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0070660_1002772902	3300005339	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0070661_1001269951	3300005344	Corn Rhizosphere	WCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0070692_100386063	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0070675_1002779522	3300005354	Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0070674_1003433991	3300005356	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRV
Ga0070659_1000867272	3300005366	Corn Rhizosphere	VTAADPARQWCVEAVGLLHDTARRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSCGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0070659_1006069941	3300005366	Corn Rhizosphere	VTVADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQLPDPPTP*
Ga0070667_1008171011	3300005367	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDT
Ga0070714_1008829981	3300005435	Agricultural Soil	RRPWRPGRPSQALGCVVTTADPGRRWCAEVTELLRDTAVRAARLASAVAADWLDPEGRDWADRIAVLRRDLDDTARRADDLAERLPDTDPELASRLVAALRAASGYGPRLGDTTGARVDETHGVQIAQLPDPPGP*
Ga0070714_1009624222	3300005435	Agricultural Soil	VTAADPTRQWCVEAVGLLHDTACRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPTLASALAAALRAAPQGSYGPRLGDTTGARVDDAHGVRIAQ
Ga0070710_104122431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVD
Ga0070678_1020290001	3300005456	Miscanthus Rhizosphere	PMRQWCLEATELLRDTAVRAARLASAVAVDWPDPDGQAWSERINTLRHDLDAAACAAEDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIAQLPDPPAP*
Ga0070685_104548052	3300005466	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTYGARVDDAHGMRVAQLPDPPA
Ga0070684_1003716372	3300005535	Corn Rhizosphere	QWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQMTDPPTP*
Ga0070684_1016146221	3300005535	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDP
Ga0070693_1009922571	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTA
Ga0070693_1011211312	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPMRQWCLEATELLRDTAVRAARLASAVAVDWLDPDGQAWSERINTLRHALDAAAYAADDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIAQLPDPPAP*
Ga0070665_1006593992	3300005548	Switchgrass Rhizosphere	VEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0070665_1021409021	3300005548	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALSRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGA
Ga0068857_1002576751	3300005577	Corn Rhizosphere	EAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0068856_1004216942	3300005614	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0068859_1002293504	3300005617	Switchgrass Rhizosphere	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0068859_1014307911	3300005617	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQ
Ga0068864_1001517443	3300005618	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPEADPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0068866_100867152	3300005718	Miscanthus Rhizosphere	ADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0068863_1008335142	3300005841	Switchgrass Rhizosphere	VEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRHDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0068858_1002280222	3300005842	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLAATVAADWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDSPTP*
Ga0068862_1014205752	3300005844	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP*
Ga0070717_103463382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0070717_106665412	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTTADPGRRWCAEVTELLRDTAVRAARLASAVAADWLDPEGRDWADRIAVLRRDLDDTARRADDLAERLPDTDPELASRLVAALRAASGYGPRLGDTTGARVDETHGVQIAQLPDPPGP*
Ga0070717_109891991	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPMRQWCLEATGLLRDTAVRAARLASAVAVDWLDPDGQAWSERINTLRHDLDAAAYAAEDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIAQLPDPPAP*
Ga0079222_100333094	3300006755	Agricultural Soil	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQVWAARIDALRRDLDEATREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0079221_101234832	3300006804	Agricultural Soil	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDSPTP*
Ga0079220_111204992	3300006806	Agricultural Soil	DPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQVWAARIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRGAPQASYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0079220_113012852	3300006806	Agricultural Soil	VTAADPTRQWCVEAVGLLHDTAGRAARLTSAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVR
Ga0075429_1003181602	3300006880	Populus Rhizosphere	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA*
Ga0068865_1000696654	3300006881	Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP*
Ga0105243_104903672	3300009148	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPEPPA
Ga0105243_108610602	3300009148	Miscanthus Rhizosphere	VVTAADPTRQWCVEAVGLLHDTAGRAARLAVTVAIDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0111538_110309992	3300009156	Populus Rhizosphere	ERPSTHRRPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDSPTP*
Ga0134125_128524631	3300010371	Terrestrial Soil	RGPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALAAALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0134128_113189881	3300010373	Terrestrial Soil	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALLAAPPGSYGPRLGDTAGARVDDAHGMRVAQLADP
Ga0134128_120154891	3300010373	Terrestrial Soil	MRQWCLEATELLRDTAVRAARLASAVAVDWPDPDGQAWSERINTLRHDLDAAACAAEDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIAQLP
Ga0134126_106211602	3300010396	Terrestrial Soil	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMCVAQLPDPPA*
Ga0134126_111020102	3300010396	Terrestrial Soil	VVTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0134127_125914621	3300010399	Terrestrial Soil	VVTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP*
Ga0134127_131003102	3300010399	Terrestrial Soil	VTAADPARQWCVEAVGLLHDTARRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARV
Ga0134121_125054462	3300010401	Terrestrial Soil	VTAANPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPQGSYGPRLGDTYGARVDDAHGMRVAQLPDPPA
Ga0134123_111686411	3300010403	Terrestrial Soil	EAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRGDLDDAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA*
Ga0105246_106039933	3300011119	Miscanthus Rhizosphere	MVTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0164299_106100352	3300012958	Soil	DTALRAARLASAVATDWLDADGQAWAVRIGALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA*
Ga0164308_104680562	3300012985	Soil	VTAADPTRQWCVEAVGLLHDTACRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPTLASALAAALRAAPQGSYGPRLGDTTGARVDDAHGVRIAQMPDSPTP*
Ga0164304_100495681	3300012986	Soil	VTAADPTRQWCVEAVGLLHDTACRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPTLASALAAALRATPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0164306_106791152	3300012988	Soil	VVTTADPGRRWCAEVTELLRDTAVRAARLASAVAADWLDPEGRDWADRIAVLRRDLDDTARRADDLAERLPDTDPELASRLVAALRAASGYGPRLGDTTGARVDDTHGVQIAQLPDPPGP
Ga0164305_100540853	3300012989	Soil	VTAADPTRQWCVEAVGLLHDTACRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPTLASALAAALRAAPQGSYGPRLGDTTGARVDDAHGVRIAQMPDPPAP*
Ga0157369_106910222	3300013105	Corn Rhizosphere	VVTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0157374_102889842	3300013296	Miscanthus Rhizosphere	MVTVADPTRQWCVEAVGLLHDTAGRAAPLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0163163_116136891	3300014325	Switchgrass Rhizosphere	MVTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP*
Ga0163163_117166412	3300014325	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLAATVAADWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0157379_108743092	3300014968	Switchgrass Rhizosphere	VTAADPTRQWCVEAVALLHDTAGRAARLAATVAADWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP*
Ga0157376_113175162	3300014969	Miscanthus Rhizosphere	VVTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDDAAREAHDLAGRLPDPALASALAAALRAAPSGGYGPQLGDVSGVRVDDAHGVRIAQLPDPPTP
Ga0157376_122874362	3300014969	Miscanthus Rhizosphere	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTYGARVDDAHGMRVAQLPDPPA*
Ga0163161_100455331	3300017792	Switchgrass Rhizosphere	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDNAAREANDLVRRLPEADPALASALATALRAAPQGGYGPRLGDTA
Ga0190266_105569222	3300017965	Soil	MTASDPSRRWCVEAAGLLHDTTVRAARLASAVTADWLDPDGQAWAARIDALRRDLDRAAGEADDLARRLPDTDPALAGVLAAVLGTATSVRYGPRLGEMSAARVDDAQGVRIAQLPDPPG
Ga0190266_107827642	3300017965	Soil	MVTVADPTWQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQMTDPPTP
Ga0190274_100820423	3300018476	Soil	VTAADPARQWCVEAIGLLHDTALRAARLASAVATDWLDADGKAWAVRIDALRRDLDEAAGETEDLVRRLPESDPALASALAAALRAAPPGGYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207642_101736542	3300025899	Miscanthus Rhizosphere	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207688_100051882	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207688_105107302	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPT
Ga0207645_106761982	3300025907	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGC
Ga0207643_100152046	3300025908	Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPT
Ga0207643_105390102	3300025908	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207705_100563032	3300025909	Corn Rhizosphere	VTAADPARQWCVEAVGLLHDTARRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207649_108285292	3300025920	Corn Rhizosphere	VTAADPARQWCVEAVGLLHDTARRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207649_113272422	3300025920	Corn Rhizosphere	RGPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP
Ga0207681_108846641	3300025923	Switchgrass Rhizosphere	DTALRAARFASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207650_100382092	3300025925	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPT
Ga0207659_106346221	3300025926	Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPT
Ga0207664_118772181	3300025929	Agricultural Soil	VTAADPTRQWCVEAVGLLHDTACRAARLASAVATDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPTLASALAAALRAAPQGSYGPRLGDTTGARVD
Ga0207690_100501893	3300025932	Corn Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSCGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207706_100203878	3300025933	Corn Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPEPPA
Ga0207686_102773532	3300025934	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207670_100792754	3300025936	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPEADPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQLPDPPT
Ga0207669_101099082	3300025937	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPEPPA
Ga0207704_105230021	3300025938	Miscanthus Rhizosphere	DPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207665_102522711	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVVTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPT
Ga0207661_120309972	3300025944	Corn Rhizosphere	ADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207679_110422331	3300025945	Corn Rhizosphere	PVVTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207712_117737651	3300025961	Switchgrass Rhizosphere	TAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPEADPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP
Ga0207640_107286262	3300025981	Corn Rhizosphere	MVTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQLPDPPTP
Ga0207658_100250653	3300025986	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0207677_114309942	3300026023	Miscanthus Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSCGPRL
Ga0207677_119827051	3300026023	Miscanthus Rhizosphere	DPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP
Ga0207708_114294152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADPTRQWCVEAVALLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQLPDPPT
Ga0207641_102745761	3300026088	Switchgrass Rhizosphere	VLRCVVGRRGGGGRPRSGERPSTHRGPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP
Ga0207641_107205492	3300026088	Switchgrass Rhizosphere	ADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207676_106735853	3300026095	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTARRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207676_109699792	3300026095	Switchgrass Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPEADPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPT
Ga0207674_102452452	3300026116	Corn Rhizosphere	VTAADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQMPDPPT
Ga0207675_1000936784	3300026118	Switchgrass Rhizosphere	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDADGQAWVVRIDALRRDLDQAAREADDLVRRLPESDPALTSALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0207683_116586561	3300026121	Miscanthus Rhizosphere	STASRVRWAVTAADPMRQWCLEATELLRDTAVRAARLASAVAVDWPDPDGQAWSERINTLRHDLDAAACAAEDLARRLPDTARPELASQLMAALAAASYGTRLGDTSGARVYDTQGVQIAQLPDPPAP
Ga0207698_113482021	3300026142	Corn Rhizosphere	WCVEAVALLHDTAGRAARLAATVAADWLDPDGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDPPTP
Ga0209178_11619932	3300027725	Agricultural Soil	HRRPVVTAADPTRQWCVEAVGLLHDTAGRAARLASAVTTDWLDPDGQAWAARIDALRRDLDNAAREANDLVRRLPETDPALASALATALRAAPQGGYGPRLGDTAGARVDDAHGVRIAQMPDSPTP
Ga0268266_108676761	3300028379	Switchgrass Rhizosphere	EAVGLLHDTAGRAARLASAVATDWLDPDGQAWAARIDALRRELDNAAREADDLVRRLPETDPALASALAAALRAAPQGSYGPRLGDTAGARVDDAHGVRIAQIPDPPTP
Ga0247828_107696622	3300028587	Soil	MVTVADPTPQWCVEAVGLLHDTAGCAARLASAVATDWLDPDGQAWTARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQESYGPRLGDTAGARVDDAHGVRIAQMTDPPTP
Ga0247828_111169901	3300028587	Soil	VEAVGLLHDTALRAAGLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0247821_100263003	3300028596	Soil	MVTVADPTPQWCVEAVGLLHDTAGRAARLATAIATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQQSYGPRLGDTAGARVDDAHGVRIAQMTDPPTP
Ga0307291_11552642	3300028707	Soil	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDAEGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPLGGYGPRLGDTSGARVDDAHGMRVAQLPEPPA
Ga0307318_103121892	3300028744	Soil	PVVTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDAEGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0307288_101429082	3300028778	Soil	VTAADPARQWCVEAVGLLHDTALRAARLASAVAMDWLDAEGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARVDDAHGMRVAQLPDPPA
Ga0307283_100238922	3300028790	Soil	MTTSDPSRRWCVEAAGLLHDTTVRAARLASAVTADWLDADGQAWAARIDALRRDLDRAAGEADDLVRRLPDPDPTLAGALTAALGAATLVRYGPRLGDTSGARVDDAHGVRIAQLPDPPG
Ga0307283_102529812	3300028790	Soil	VTAADPARQWCVEAVGLLHDTALRAARLASAVAVDWLDADGQVCAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPLGGYGPRLGDTSGARVDDAHG
Ga0247825_101048232	3300028812	Soil	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0307310_104956191	3300028824	Soil	MTTSDPSRRWCVEAAGLLHDTTVRAARLASAVTADWLDADGQAWAARIDALRRDLDRAAGEADDLVRRLPDPDPTLAGALTAALGAATLVRYGPRLGDTSGARVDD
Ga0247827_102136281	3300028889	Soil	ASIRAARLATAIATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQQSYGPRLGDTAGARVDDAHGVRIAQMTDPPTP
Ga0247826_100078264	3300030336	Soil	VAGRGPVVTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIGALRRDLDEAAREADDLVRRLPESDPALASALAAALRAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0247826_100224752	3300030336	Soil	MVTVADPTPQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQQSYGPRLGDTAGARVDDAHGVRIAQMTDPPTP
Ga0247826_101266002	3300030336	Soil	MTASDPSRRWCVEAAALLHDTTVRAARLAAAVTADWLDPDGQAWAARIDALRRDLDRAAAEADDLARRLPDTDPALAGVLAAALGTSVRYGPRLGELSGARVDDAHGVRIAQLPDPPGL
Ga0310906_105238322	3300032013	Soil	VTAADPARQWCVEAVGLLHDTALRAARLASAVATDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTAGARVDDAHGMRVAQLPDPPA
Ga0308173_115314131	3300032074	Soil	VTAADPARQWCVEAVRLLHDTALRAARLASAVAMDWLDADGQAWAVRIDALRRDLDEAAREADDLVRRLPESDPALASALAAALRAAPPGSYGPRLGDTSGARV
Ga0247829_101163921	3300033550	Soil	ADPTRQWCVEAVGLLHDTAGRAARLASAVATDWLDPHGQAWAARIDALRRDLDNAAREADDLVRRLPETDPALASALAAALRAAPQQSYGPRLGDTAGARVDDAHGVRIAQMTDPPTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061761

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences