Basic Information | |
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Family ID | F061760 |
Family Type | Metagenome |
Number of Sequences | 131 |
Average Sequence Length | 46 residues |
Representative Sequence | MATTTKKGSKNKKAKLRRPLVKTSVAKQAQTIAELRQQLAE |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 131 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 15.62 % |
% of genes near scaffold ends (potentially truncated) | 94.66 % |
% of genes from short scaffolds (< 2000 bps) | 91.60 % |
Associated GOLD sequencing projects | 90 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.42 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (63.359 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.557 % of family members) |
Environment Ontology (ENVO) | Unclassified (21.374 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (44.275 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 131 Family Scaffolds |
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PF04392 | ABC_sub_bind | 7.63 |
PF02265 | S1-P1_nuclease | 6.87 |
PF02518 | HATPase_c | 2.29 |
PF00501 | AMP-binding | 1.53 |
PF01738 | DLH | 1.53 |
PF09084 | NMT1 | 1.53 |
PF04909 | Amidohydro_2 | 1.53 |
PF07883 | Cupin_2 | 1.53 |
PF16864 | Dimerisation2 | 0.76 |
PF02464 | CinA | 0.76 |
PF13738 | Pyr_redox_3 | 0.76 |
PF13395 | HNH_4 | 0.76 |
PF08448 | PAS_4 | 0.76 |
PF01590 | GAF | 0.76 |
PF04264 | YceI | 0.76 |
PF01609 | DDE_Tnp_1 | 0.76 |
PF07411 | DUF1508 | 0.76 |
PF05443 | ROS_MUCR | 0.76 |
PF00034 | Cytochrom_C | 0.76 |
PF13432 | TPR_16 | 0.76 |
PF10755 | DUF2585 | 0.76 |
PF08401 | ArdcN | 0.76 |
COG ID | Name | Functional Category | % Frequency in 131 Family Scaffolds |
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COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 7.63 |
COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 1.53 |
COG4521 | ABC-type taurine transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 1.53 |
COG1546 | Nicotinamide mononucleotide (NMN) deamidase PncC | Coenzyme transport and metabolism [H] | 0.76 |
COG2353 | Polyisoprenoid-binding periplasmic protein YceI | General function prediction only [R] | 0.76 |
COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.76 |
COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.76 |
COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.76 |
COG3422 | Uncharacterized conserved protein YegP, UPF0339 family | Function unknown [S] | 0.76 |
COG4227 | Antirestriction protein ArdC | Replication, recombination and repair [L] | 0.76 |
COG4957 | Predicted transcriptional regulator | Transcription [K] | 0.76 |
COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.76 |
COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.76 |
COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.76 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 63.36 % |
All Organisms | root | All Organisms | 36.64 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000364|INPhiseqgaiiFebDRAFT_101614480 | All Organisms → cellular organisms → Bacteria | 1782 | Open in IMG/M |
3300000787|JGI11643J11755_11543658 | Not Available | 1621 | Open in IMG/M |
3300000956|JGI10216J12902_102933726 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 739 | Open in IMG/M |
3300004463|Ga0063356_101500005 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 998 | Open in IMG/M |
3300004463|Ga0063356_103229763 | Not Available | 702 | Open in IMG/M |
3300004463|Ga0063356_103483381 | Not Available | 678 | Open in IMG/M |
3300004480|Ga0062592_101388274 | Not Available | 668 | Open in IMG/M |
3300005093|Ga0062594_100631555 | All Organisms → cellular organisms → Bacteria | 948 | Open in IMG/M |
3300005172|Ga0066683_10565214 | Not Available | 693 | Open in IMG/M |
3300005289|Ga0065704_10062119 | Not Available | 534 | Open in IMG/M |
3300005290|Ga0065712_10337957 | Not Available | 804 | Open in IMG/M |
3300005293|Ga0065715_10899863 | Not Available | 560 | Open in IMG/M |
3300005293|Ga0065715_10943013 | Not Available | 521 | Open in IMG/M |
3300005294|Ga0065705_10013516 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Gulbenkiania → Gulbenkiania indica | 4069 | Open in IMG/M |
3300005294|Ga0065705_10998472 | Not Available | 537 | Open in IMG/M |
3300005332|Ga0066388_106903373 | Not Available | 571 | Open in IMG/M |
3300005564|Ga0070664_100374881 | All Organisms → cellular organisms → Bacteria | 1298 | Open in IMG/M |
3300005564|Ga0070664_102030253 | Not Available | 546 | Open in IMG/M |
3300005713|Ga0066905_100999492 | Not Available | 737 | Open in IMG/M |
3300005874|Ga0075288_1004612 | All Organisms → cellular organisms → Bacteria | 1750 | Open in IMG/M |
3300006058|Ga0075432_10006294 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 4035 | Open in IMG/M |
3300006755|Ga0079222_10223674 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1156 | Open in IMG/M |
3300006845|Ga0075421_101257657 | Not Available | 822 | Open in IMG/M |
3300006845|Ga0075421_101761408 | Not Available | 668 | Open in IMG/M |
3300006845|Ga0075421_102428646 | Not Available | 548 | Open in IMG/M |
3300006845|Ga0075421_102688042 | Not Available | 515 | Open in IMG/M |
3300006846|Ga0075430_100024276 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 5159 | Open in IMG/M |
3300006847|Ga0075431_101800588 | Not Available | 568 | Open in IMG/M |
3300006847|Ga0075431_102199210 | Not Available | 506 | Open in IMG/M |
3300006853|Ga0075420_100678150 | Not Available | 889 | Open in IMG/M |
3300006853|Ga0075420_100836481 | All Organisms → cellular organisms → Bacteria | 793 | Open in IMG/M |
3300006854|Ga0075425_100608646 | Not Available | 1256 | Open in IMG/M |
3300006854|Ga0075425_103177848 | Not Available | 500 | Open in IMG/M |
3300006904|Ga0075424_100003012 | All Organisms → cellular organisms → Bacteria | 15657 | Open in IMG/M |
3300007004|Ga0079218_10273567 | All Organisms → cellular organisms → Bacteria | 1351 | Open in IMG/M |
3300007004|Ga0079218_11199698 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 787 | Open in IMG/M |
3300009098|Ga0105245_11946613 | Not Available | 641 | Open in IMG/M |
3300009147|Ga0114129_13012845 | All Organisms → cellular organisms → Bacteria | 553 | Open in IMG/M |
3300009147|Ga0114129_13127767 | Not Available | 540 | Open in IMG/M |
3300009156|Ga0111538_10604273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1391 | Open in IMG/M |
3300009156|Ga0111538_11975404 | Not Available | 733 | Open in IMG/M |
3300009156|Ga0111538_12651901 | Not Available | 628 | Open in IMG/M |
3300009162|Ga0075423_10204227 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium | 2072 | Open in IMG/M |
3300009162|Ga0075423_10525416 | All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium | 1245 | Open in IMG/M |
3300009162|Ga0075423_10850241 | Not Available | 966 | Open in IMG/M |
3300009162|Ga0075423_11174351 | All Organisms → cellular organisms → Bacteria | 819 | Open in IMG/M |
3300009176|Ga0105242_13103904 | Not Available | 515 | Open in IMG/M |
3300009553|Ga0105249_11487671 | All Organisms → cellular organisms → Bacteria | 749 | Open in IMG/M |
3300009609|Ga0105347_1114684 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1027 | Open in IMG/M |
3300009823|Ga0105078_1026828 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 689 | Open in IMG/M |
3300010029|Ga0105074_1035037 | Not Available | 863 | Open in IMG/M |
3300010043|Ga0126380_12293876 | Not Available | 501 | Open in IMG/M |
3300010046|Ga0126384_10267371 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1390 | Open in IMG/M |
3300010046|Ga0126384_11076301 | Not Available | 736 | Open in IMG/M |
3300010046|Ga0126384_12476519 | Not Available | 503 | Open in IMG/M |
3300010047|Ga0126382_10566506 | Not Available | 928 | Open in IMG/M |
3300010047|Ga0126382_10778762 | Not Available | 813 | Open in IMG/M |
3300010047|Ga0126382_11020115 | Not Available | 727 | Open in IMG/M |
3300010047|Ga0126382_11685842 | All Organisms → cellular organisms → Bacteria | 591 | Open in IMG/M |
3300010047|Ga0126382_11735374 | All Organisms → cellular organisms → Bacteria | 584 | Open in IMG/M |
3300010358|Ga0126370_10254335 | All Organisms → cellular organisms → Bacteria | 1365 | Open in IMG/M |
3300010358|Ga0126370_11207733 | Not Available | 703 | Open in IMG/M |
3300010359|Ga0126376_11860665 | Not Available | 641 | Open in IMG/M |
3300010359|Ga0126376_12987502 | Not Available | 522 | Open in IMG/M |
3300010361|Ga0126378_11767905 | Not Available | 703 | Open in IMG/M |
3300010362|Ga0126377_10451526 | Not Available | 1308 | Open in IMG/M |
3300010371|Ga0134125_10241303 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2009 | Open in IMG/M |
3300010376|Ga0126381_103898913 | Not Available | 582 | Open in IMG/M |
3300010376|Ga0126381_104900074 | Not Available | 514 | Open in IMG/M |
3300010398|Ga0126383_12514014 | Not Available | 599 | Open in IMG/M |
3300010398|Ga0126383_12940980 | Not Available | 556 | Open in IMG/M |
3300010399|Ga0134127_10288490 | All Organisms → cellular organisms → Bacteria | 1574 | Open in IMG/M |
3300011439|Ga0137432_1024485 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1754 | Open in IMG/M |
3300011439|Ga0137432_1312934 | Not Available | 501 | Open in IMG/M |
3300012209|Ga0137379_10416626 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 1252 | Open in IMG/M |
3300012209|Ga0137379_10837580 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 824 | Open in IMG/M |
3300012349|Ga0137387_10803534 | Not Available | 681 | Open in IMG/M |
3300012355|Ga0137369_11135306 | Not Available | 508 | Open in IMG/M |
3300012356|Ga0137371_11203295 | Not Available | 565 | Open in IMG/M |
3300012357|Ga0137384_10164978 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1854 | Open in IMG/M |
3300012361|Ga0137360_11807391 | Not Available | 517 | Open in IMG/M |
3300012499|Ga0157350_1017707 | Not Available | 683 | Open in IMG/M |
3300012507|Ga0157342_1021771 | Not Available | 750 | Open in IMG/M |
3300012885|Ga0157287_1034403 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 735 | Open in IMG/M |
3300012931|Ga0153915_13374979 | Not Available | 518 | Open in IMG/M |
3300012948|Ga0126375_11960469 | Not Available | 516 | Open in IMG/M |
3300012971|Ga0126369_11023431 | Not Available | 914 | Open in IMG/M |
3300012971|Ga0126369_11238596 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 836 | Open in IMG/M |
3300012971|Ga0126369_12725740 | Not Available | 578 | Open in IMG/M |
3300012988|Ga0164306_11130908 | Not Available | 653 | Open in IMG/M |
3300014255|Ga0075320_1086930 | Not Available | 604 | Open in IMG/M |
3300014311|Ga0075322_1190357 | Not Available | 521 | Open in IMG/M |
3300014320|Ga0075342_1087586 | Not Available | 799 | Open in IMG/M |
3300014866|Ga0180090_1036104 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 813 | Open in IMG/M |
3300014868|Ga0180088_1008234 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1491 | Open in IMG/M |
3300015371|Ga0132258_12303414 | All Organisms → cellular organisms → Bacteria | 1351 | Open in IMG/M |
3300015372|Ga0132256_100732973 | All Organisms → cellular organisms → Bacteria | 1104 | Open in IMG/M |
3300015372|Ga0132256_100967785 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 967 | Open in IMG/M |
3300015372|Ga0132256_101117693 | Not Available | 902 | Open in IMG/M |
3300015374|Ga0132255_101269838 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1110 | Open in IMG/M |
3300015374|Ga0132255_105307093 | Not Available | 545 | Open in IMG/M |
3300016371|Ga0182034_11513348 | Not Available | 588 | Open in IMG/M |
3300016404|Ga0182037_10590901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 941 | Open in IMG/M |
3300017966|Ga0187776_10350042 | Not Available | 975 | Open in IMG/M |
3300018067|Ga0184611_1232599 | Not Available | 655 | Open in IMG/M |
3300018071|Ga0184618_10097028 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1151 | Open in IMG/M |
3300021081|Ga0210379_10242289 | Not Available | 782 | Open in IMG/M |
3300025911|Ga0207654_10877716 | Not Available | 650 | Open in IMG/M |
3300025920|Ga0207649_11139817 | Not Available | 616 | Open in IMG/M |
3300025930|Ga0207701_10039285 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 4413 | Open in IMG/M |
3300025993|Ga0208415_1017326 | Not Available | 691 | Open in IMG/M |
3300026014|Ga0208776_1012551 | Not Available | 705 | Open in IMG/M |
3300026025|Ga0208778_1025959 | Not Available | 583 | Open in IMG/M |
3300026535|Ga0256867_10037230 | All Organisms → cellular organisms → Bacteria | 2015 | Open in IMG/M |
3300027360|Ga0209969_1070655 | Not Available | 555 | Open in IMG/M |
3300027577|Ga0209874_1116648 | Not Available | 624 | Open in IMG/M |
3300027646|Ga0209466_1039697 | All Organisms → cellular organisms → Bacteria | 957 | Open in IMG/M |
3300027886|Ga0209486_10152767 | All Organisms → cellular organisms → Bacteria | 1273 | Open in IMG/M |
3300027909|Ga0209382_11920447 | Not Available | 571 | Open in IMG/M |
3300031562|Ga0310886_10721641 | Not Available | 622 | Open in IMG/M |
3300031716|Ga0310813_10631013 | All Organisms → cellular organisms → Bacteria | 951 | Open in IMG/M |
3300031720|Ga0307469_12307422 | Not Available | 525 | Open in IMG/M |
3300031858|Ga0310892_10611578 | Not Available | 739 | Open in IMG/M |
3300031892|Ga0310893_10298664 | Not Available | 681 | Open in IMG/M |
3300031942|Ga0310916_10612621 | Not Available | 925 | Open in IMG/M |
3300032163|Ga0315281_10536219 | Not Available | 1240 | Open in IMG/M |
3300032180|Ga0307471_104218803 | Not Available | 508 | Open in IMG/M |
3300033513|Ga0316628_101477800 | All Organisms → cellular organisms → Bacteria | 905 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 17.56% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 17.56% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.34% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.05% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.05% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.05% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 3.05% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.05% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 3.05% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.29% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.29% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 2.29% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.29% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 2.29% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.29% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.29% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 2.29% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.53% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.53% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.53% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.53% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.53% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 1.53% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.53% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.76% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.76% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.76% |
Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.76% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.76% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.76% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.76% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.76% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.76% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.76% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.76% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000787 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005874 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 | Environmental | Open in IMG/M |
3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009609 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 | Environmental | Open in IMG/M |
3300009823 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 | Environmental | Open in IMG/M |
3300010029 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300011439 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2 | Environmental | Open in IMG/M |
3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012499 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610 | Environmental | Open in IMG/M |
3300012507 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 | Host-Associated | Open in IMG/M |
3300012885 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300014255 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2 | Environmental | Open in IMG/M |
3300014311 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 | Environmental | Open in IMG/M |
3300014320 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 | Environmental | Open in IMG/M |
3300014866 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D | Environmental | Open in IMG/M |
3300014868 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300017966 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG | Environmental | Open in IMG/M |
3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
3300018071 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1 | Environmental | Open in IMG/M |
3300021081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo | Environmental | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025993 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes) | Environmental | Open in IMG/M |
3300026014 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes) | Environmental | Open in IMG/M |
3300026025 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes) | Environmental | Open in IMG/M |
3300026535 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq) | Environmental | Open in IMG/M |
3300027360 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027577 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes) | Environmental | Open in IMG/M |
3300027646 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300031892 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2 | Environmental | Open in IMG/M |
3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1016144801 | 3300000364 | Soil | MPTTTKKGSKNTKAKPRRAAVKTSPAKQAQTNAELRLALAQSLQREDATAKEL |
JGI11643J11755_115436583 | 3300000787 | Soil | MARTTKKGSKNKKPKLRRPVVKNPQPNRAQTIAELRQELEARNRDLA |
JGI10216J12902_1029337261 | 3300000956 | Soil | MATTTKKGSKNKKPKLRRPVVKTSLTEQAQTIAELRRQVAE |
Ga0063356_1015000051 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MATTTKRGGKTTKTKQRRPNVKMSPAEQAQANAELRQQLAESLQREKAT |
Ga0063356_1032297631 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTTTTKKGSKRKKANPRRAVAKTSLAKQAQNIVELRQQLAESLKRENAIAKVL |
Ga0063356_1034833811 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSISEFVFMATTTKKDSKTKKAKPRSPNVKTSAAEQARTNAELRRQLAESLQRENAT |
Ga0062592_1013882741 | 3300004480 | Soil | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALEREKAA |
Ga0062594_1006315552 | 3300005093 | Soil | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQAL |
Ga0066683_105652141 | 3300005172 | Soil | MATTTKKGSKNKKAKLRRPVVKTSLVKQEQTIAKLRQQLAESLQR |
Ga0065704_100621192 | 3300005289 | Switchgrass Rhizosphere | MAITTKNGSKNKKARLRRPVVKTSPAKQAQTIAELGQQLAESLQREEAALKDLQDRDQQ |
Ga0065712_103379572 | 3300005290 | Miscanthus Rhizosphere | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALAGC* |
Ga0065715_108998631 | 3300005293 | Miscanthus Rhizosphere | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALEREK |
Ga0065715_109430131 | 3300005293 | Miscanthus Rhizosphere | MAITNKKGSKTRKTKQLRPKMKTSVAEQAQANAELRQQLAESLQREKATAEELQNWKRQF |
Ga0065705_100135164 | 3300005294 | Switchgrass Rhizosphere | MATTTKKGSKNKKAKLRSPVVKTSVAEQTQTIAELRQQLVESLQR |
Ga0065705_109984721 | 3300005294 | Switchgrass Rhizosphere | MATTNKKGSKNTKAKPRRPVVKTSPATPAQTIAELRQQLAES |
Ga0066388_1069033732 | 3300005332 | Tropical Forest Soil | MATTTKKGSENSKAKPRRAVVKTSVPEQAQTIAELRRELEAR |
Ga0070664_1003748811 | 3300005564 | Corn Rhizosphere | MATTKKKGSKNKKTTLRRPVMKTSVTKQAQTIAEL |
Ga0070664_1020302531 | 3300005564 | Corn Rhizosphere | MASTNKKGSKSKKPILRRPKMKTSVAEQAQANAELRQQLA |
Ga0066905_1009994921 | 3300005713 | Tropical Forest Soil | MATTTKKGSKNKKAKLRRPMVNTSVAEQAQTIAELRQ |
Ga0075288_10046121 | 3300005874 | Rice Paddy Soil | MASTTKKGSKNKKAKPRRPLVKTSPAKHAPTMAELRQQLAESVQRRARPAAKTSDCSKS* |
Ga0075432_100062943 | 3300006058 | Populus Rhizosphere | MATTTKKGSKNKRAKLRGSVVKTSVAEQAAQTIAELRQQLAESLQRESATA |
Ga0079222_102236741 | 3300006755 | Agricultural Soil | MAIRTKKGSKSKKAKPRRPAVKTSEAEHVQTIAELRQELAESLERESTT |
Ga0075421_1012576571 | 3300006845 | Populus Rhizosphere | MTTTTKKGSKRKKANPRRAVAKTSSAKQAQAIVELRQQLAESLKGENAIAKVLRDRDGQL |
Ga0075421_1017614082 | 3300006845 | Populus Rhizosphere | MARAPKKLSTVKKAKLRRPVVKTSKAKQEQTIAELRHEL |
Ga0075421_1024286461 | 3300006845 | Populus Rhizosphere | MAATTHKGSKTKTAKQRRPSVKTSVAGQTQTIAELRQRLVELSQRERT |
Ga0075421_1026880422 | 3300006845 | Populus Rhizosphere | MASTTRKASKNKKSKLRNPVVKTSPVKHAQTNAELRKQLAECMQRENATSEILRLIA |
Ga0075430_1000242765 | 3300006846 | Populus Rhizosphere | MATTTKKGSENKRAKLRGPVVKTSVAEQAQTIAELRQQLAESLQRE |
Ga0075431_1018005881 | 3300006847 | Populus Rhizosphere | MVTPTKKGPKNTKAKPHRAVVKTTLAKRGQTIAELR |
Ga0075431_1021992102 | 3300006847 | Populus Rhizosphere | MATTTEKGSKKKNAKPRPPVVKSPPAKQAQTIAELRQELE |
Ga0075420_1006781501 | 3300006853 | Populus Rhizosphere | MATTTKKGSKNKRAKLRGSVVKTSVAEQAAQTIAELRQQLAESLQRESAT |
Ga0075420_1008364813 | 3300006853 | Populus Rhizosphere | MATTTKKGSKNKKTKPRRPVVKTSPAKQAQTIAELRQ |
Ga0075425_1006086461 | 3300006854 | Populus Rhizosphere | MATTTKKGSKNKRPKLRGPVVKTSVTEQAQTHAELRQQLAESL |
Ga0075425_1031778481 | 3300006854 | Populus Rhizosphere | MATTIKKGSKNKRPKLRGPVMKTSVAEQAQTIAELRQQ |
Ga0075424_1000030121 | 3300006904 | Populus Rhizosphere | MATTTKKGSKNKKPKLRRTVDKTSVAKQARAMVELRRQ |
Ga0079218_102735671 | 3300007004 | Agricultural Soil | MATPTKKGSKNTKAKPRRAVAKTSLAKQAHTIAELRQELSQSCSGRTRLPRN |
Ga0079218_111996982 | 3300007004 | Agricultural Soil | VATKKSSENKRAKPRRRVLKPPVAEQVQTIAELRQQLAESLQRESATAK |
Ga0105245_119466131 | 3300009098 | Miscanthus Rhizosphere | MARTTKKGSNNKKATLRRPVMKTSVAEQAQTIAEHGTPM* |
Ga0114129_130128452 | 3300009147 | Populus Rhizosphere | MATTTQKGSKSKKAKLRRPVVKTSLAKLAQTIAELRQELAECLEWQKAALKDLQDRDR |
Ga0114129_131277672 | 3300009147 | Populus Rhizosphere | VKPPSKNDSKNIKAKPRRAVVKTTLAKQAQTIAELRQELAQ |
Ga0111538_106042733 | 3300009156 | Populus Rhizosphere | MATTTKKGSKRKNANPRRAVMKKPLAEQAQTIAELRQELAES |
Ga0111538_119754043 | 3300009156 | Populus Rhizosphere | MASTNKKGSKSKKPILRRPKMKTSVAEQAQANAELRQQLAECLQRE |
Ga0111538_126519012 | 3300009156 | Populus Rhizosphere | MASTTKKGSKKAKPRRPVVKTSPKQAQMIAELRQQLTESLQRESRALKKFQDRDQQLAE |
Ga0075423_102042271 | 3300009162 | Populus Rhizosphere | MATTTKKGSKNKKAKLRRPLVKTSVAKQAQTIAELRQQLAE |
Ga0075423_105254163 | 3300009162 | Populus Rhizosphere | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALEREKAALKKLQDRD |
Ga0075423_108502412 | 3300009162 | Populus Rhizosphere | MATTTRKGSDNKKAKPRRPMVKTLVAEQAQTIAELRQ |
Ga0075423_111743511 | 3300009162 | Populus Rhizosphere | MAFTTKKDSKKSKAKPRPPVVKTSVAEHVQTIAELRQQLAESLQREKATASET |
Ga0105242_131039042 | 3300009176 | Miscanthus Rhizosphere | MATTTKKGSKKSKAKRRRPVVKTPLAKETQTIAELRRQLAEL |
Ga0105249_114876711 | 3300009553 | Switchgrass Rhizosphere | MTTTTKKDSQSVKAKRRRAAVKSSPAKQAQTIAELRQELAES |
Ga0105347_11146841 | 3300009609 | Soil | MATTTKKGSKNKRAKLRGPVVKTSVAEQAQTIAELRQQLAESLQRENATAR |
Ga0105078_10268282 | 3300009823 | Groundwater Sand | MATTSKKGSENKRAKLRGSVVKTSAREQAQTNAELRQQLAEALEREKAALKKLQDRDQ |
Ga0105074_10350371 | 3300010029 | Groundwater Sand | LFFVATKKSSKTKKTKLRRPMVKTSVVEQGQTIAELRR |
Ga0126380_122938762 | 3300010043 | Tropical Forest Soil | MATTTKKGSKNKKAKLRGPVVNTSVAEQAQTNAELRQELAESLQRENATA |
Ga0126384_102673713 | 3300010046 | Tropical Forest Soil | MATTTKKGSKNTKAKPRRAAVKTSPAKQAQTNAELRLALAQSLQRED |
Ga0126384_110763012 | 3300010046 | Tropical Forest Soil | MATTTKKGAKNKKAKLRRPMVNTSVAEQAQTNAELRQQL |
Ga0126384_124765192 | 3300010046 | Tropical Forest Soil | MATTTKKGSKNKRPKLRVPMVKTSVAEQAPTIAELRQQ |
Ga0126382_105665062 | 3300010047 | Tropical Forest Soil | MATTTRKGSDNKMAKPRRPMVNTLVAEQAQTIAELRQQLAES |
Ga0126382_107787622 | 3300010047 | Tropical Forest Soil | MATTTKKGSKNKRAKLRGSVVKTSAGEQPQTNAELRQQLAEALEREKAALK |
Ga0126382_110201152 | 3300010047 | Tropical Forest Soil | MATTTKKGSKNSKAKPHRAVVKTTLAKRGQTIAELRQEVEARNRD |
Ga0126382_116858421 | 3300010047 | Tropical Forest Soil | VFMATTTRKGSKNKKAKPRRPMVKTSVAEQAQTIAELRQQLAESLQRENTALKKS* |
Ga0126382_117353741 | 3300010047 | Tropical Forest Soil | MAATTKKGAKTTKTKQRRPKVKTSVAEQTQTIAEL |
Ga0126370_102543351 | 3300010358 | Tropical Forest Soil | MATTTKKGSKITKSNPRRPKLKTSMAEQAQTNAEL |
Ga0126370_112077331 | 3300010358 | Tropical Forest Soil | MANPTKKGSQNSKAKPRRAVVKTSVPEQAQTNAELRQQLAESLQREDAT |
Ga0126376_118606652 | 3300010359 | Tropical Forest Soil | MATTTKKGSKNKRAKLRRPVVKTSVPKQAQTIAELRQ |
Ga0126376_129875021 | 3300010359 | Tropical Forest Soil | MATTTRKGSDNKKTKPRRPMVKTSPPKRAQTNAELRQQLAESL |
Ga0126378_117679052 | 3300010361 | Tropical Forest Soil | MATTTRKGSENKRAKPRRPVVKTSADEQAQTIAELRQQLAESLLRE |
Ga0126377_104515263 | 3300010362 | Tropical Forest Soil | MATTTKKGSKNTKAKPRRAVVKTSLTEQAQTIAELRQQLVESLLREE |
Ga0134125_102413031 | 3300010371 | Terrestrial Soil | MARAPKKLSTVKKAKPRRPLVKTSKAKQEQTIAELRHELAESLQRENATAKK |
Ga0126381_1038989131 | 3300010376 | Tropical Forest Soil | MAATTKRGSKTTKTEQRRPKLKTSVAKQAQTIADLRQQVA |
Ga0126381_1049000742 | 3300010376 | Tropical Forest Soil | MASKKSSKTKKAKLRQPTVKTSVAEQAQTIAELRQELEA |
Ga0126383_125140141 | 3300010398 | Tropical Forest Soil | VKPPSKKGSKDSKAKPRRAVVKTSMTEQEQTIAELRQELH |
Ga0126383_129409802 | 3300010398 | Tropical Forest Soil | MATTSKKGSKNKKAKPRRPMVKTSVTEQVQTIAELRQQLA |
Ga0134127_102884905 | 3300010399 | Terrestrial Soil | MATTTKKGPKNTKAKPRRPVVKTSPATPAQTIAALRQQLAESLQRENL |
Ga0137432_10244851 | 3300011439 | Soil | MATTTKKGSKNKRAKLRGPVVKTSVAEQAQTIAELRQQLAESLQRENATAK |
Ga0137432_13129341 | 3300011439 | Soil | MATTTKKGSKNTKAKPRRAVQKAPPAKQAQTIAELRQEL |
Ga0137379_104166263 | 3300012209 | Vadose Zone Soil | MVTTTKKGSKNKKAKLRRRVVKTSLPEQARTIAEL |
Ga0137379_108375801 | 3300012209 | Vadose Zone Soil | MATTTKKGSKNKKPKLRRVVKTSLAKQPQTIAELRQELAESCSGR |
Ga0137387_108035341 | 3300012349 | Vadose Zone Soil | MVTTTKKGSKNKKAKLRRPVVKTLQAKQAPTIAELRQQLAESLQRENATAKKLQDCKC |
Ga0137369_111353061 | 3300012355 | Vadose Zone Soil | MASPTKKGANNKKARLRRPVVKTSQAEQAQTIAELRQQLAESLQRENATSE |
Ga0137371_112032952 | 3300012356 | Vadose Zone Soil | MATTTKKGSKNKKAKVRRPVVKTSPAEQPQTIAELRQQLAESL |
Ga0137384_101649783 | 3300012357 | Vadose Zone Soil | MVTTTKKGSKNKKAKLRRRVVKTSLPEQARTIAELRQQLEARNRDLA |
Ga0137360_118073911 | 3300012361 | Vadose Zone Soil | MATTTKKSSKSKKAKPRRPMVNTSVAKQAQTVAELRQQLAESLLREE |
Ga0157350_10177071 | 3300012499 | Unplanted Soil | MASTTKKGSNNKKARLRRHVVKTPPVKQKPTYAELRQELDES |
Ga0157342_10217712 | 3300012507 | Arabidopsis Rhizosphere | MARTTKKGSKSKKPILRRPKMKTSVAEQAQANAELRQQLAECLQREKATAEELQNWKRQFTEAF |
Ga0157342_10771171 | 3300012507 | Arabidopsis Rhizosphere | VASKKSSKNKKTTPRRPKVKTSVANEAQTIPELRQQLAE |
Ga0157287_10344031 | 3300012885 | Soil | KNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALAGC* |
Ga0153915_133749791 | 3300012931 | Freshwater Wetlands | MATTTKKGSKNTKGKLRRPVVKSSPAKRAQTIGELRQQLAESAKEL |
Ga0126375_119604691 | 3300012948 | Tropical Forest Soil | MATPTKKGSKNKTAKLRGSVVKTSVDEQAQTIAELRQQL |
Ga0126369_110234311 | 3300012971 | Tropical Forest Soil | MATTTRKGSKNTKAKPRRPMVKTSVAEQAQTIVELRQELEARNRDLA |
Ga0126369_112385962 | 3300012971 | Tropical Forest Soil | MATKKSSNNKKARLRRPKVATSVNEQTQTIAELRQQLA |
Ga0126369_127257401 | 3300012971 | Tropical Forest Soil | MATTTKKGSENKRAKPRRPVVNTPVAEQAQTIGELRQQLAEALEREKAALKK* |
Ga0164306_111309082 | 3300012988 | Soil | MATTKKKGSKNKKTTLRRPVMKTSVTKQAQTIAELR |
Ga0075320_10869301 | 3300014255 | Natural And Restored Wetlands | MATTTKKGSKNKRAKLRGSVVKTSAAEQAQTIAELRQELEARNRDL |
Ga0075322_11903572 | 3300014311 | Natural And Restored Wetlands | MASTTKKGSKNKKAKPRRPLVKTSPAKHAPTMAELRQ |
Ga0075342_10875861 | 3300014320 | Natural And Restored Wetlands | MATTTKKGSKNTKAKPRRVAVKSPPKRLQTITGLRQELEARDHE |
Ga0180090_10361041 | 3300014866 | Soil | MATTTKKGSKNKRAKLRGPVVKTSVAEQAQTIAELRQQLAESLQRENATAKELQDC |
Ga0180088_10082342 | 3300014868 | Soil | MATTTKKGSKNKRAKLRGPVVKTSVAEQAQTIAELRQQLAESLQ |
Ga0132258_123034141 | 3300015371 | Arabidopsis Rhizosphere | MASTTKKGGKITKAEPRRRKAKTSVAEQAQTIVELRQQ |
Ga0132256_1007329732 | 3300015372 | Arabidopsis Rhizosphere | MATTTKKGSNSKKPRPRRPVVKTSVAEQAQTIAELRQQLAECLEWQKAALKDLQDRDQQL |
Ga0132256_1009677852 | 3300015372 | Arabidopsis Rhizosphere | MAITTKKGSKNTKPNLRRPVVKSPPNRAQTNIELRQQLEASHRERDEAREEQSAT |
Ga0132256_1011176932 | 3300015372 | Arabidopsis Rhizosphere | MASTTKKGSKNKNAKLRRPTVKTSVAEQAQTNAELRQQLA |
Ga0132255_1012698381 | 3300015374 | Arabidopsis Rhizosphere | MATTTKKRSNTKKAKPRSPSLKTSATGQARTVAELRQQLAESLRREKATAKE |
Ga0132255_1027404593 | 3300015374 | Arabidopsis Rhizosphere | MARPTKKGSKNKKPKLRRPVVKTSVTEQAQIIAELRQQLAESLQRETATAKELREALEHQ |
Ga0132255_1053070931 | 3300015374 | Arabidopsis Rhizosphere | MASTTKKGSKHSKAKLGRPNVKTSVAEQAQTIAELRQQLAESLEWKKA |
Ga0182036_107415111 | 3300016270 | Soil | MVTKRSSKTEKAKLRRPKVKTSVAEQAQTIAALRQQLAESLQ |
Ga0182034_115133482 | 3300016371 | Soil | MATTPKKGSKNKKVKLRRPAMKTSVAEQAQTNAELRQEFTESLQRESVTASENV |
Ga0182037_105909011 | 3300016404 | Soil | MATKKSSNNKKARLRRPKVETSVNEQTQTIAELRQQLA |
Ga0187776_103500422 | 3300017966 | Tropical Peatland | MATTTKKGSKNKKTKLRRPVVNTLVAKQAQTIADLRQQLGESLLREEAKDKKL |
Ga0184611_12325991 | 3300018067 | Groundwater Sediment | MATTTQKGSKSKKAKLRRPVVKTSLAKLAQTNAELRQQLAESLRREKAALK |
Ga0184618_100970281 | 3300018071 | Groundwater Sediment | MPSPTKKGAKKPKAKLRRLVVKTSQTEQAQTIAALRQQLAE |
Ga0210379_102422892 | 3300021081 | Groundwater Sediment | MASTTKKGSKNKKARLRRPPMKTSVPEQATIVELRQQL |
Ga0207654_108777161 | 3300025911 | Corn Rhizosphere | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALA |
Ga0207649_111398171 | 3300025920 | Corn Rhizosphere | MATTTKKGSKNKETKLRRPNVKTSPTKQAQTIAELRQQVAQALEREKAALKKLQDRDQ |
Ga0207701_100392851 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MATTTKKGSKAKNAKLRRSVKVKASQTDEAQTITKLRQELA |
Ga0208415_10173261 | 3300025993 | Rice Paddy Soil | MASTTKKGSKNKKAKPRRPLVKTSPAKHAPTMAELRQQLAESVQRRARPAAKTS |
Ga0208776_10125511 | 3300026014 | Rice Paddy Soil | MASTTKKGSKNKKAKPRRPLVKTSPAKHAPTMAELRQQLAESV |
Ga0208778_10259591 | 3300026025 | Rice Paddy Soil | MASTTKKGSKNKKAKPRRPLVKTSPAKHAPTMAELRQQLAESVQRRARPAAK |
Ga0256867_100372303 | 3300026535 | Soil | MATTTKKGSQNKKPKLRRPIVNTSVAEQAQTIAELRQQLAESAKELQDC |
Ga0209969_10706551 | 3300027360 | Arabidopsis Thaliana Rhizosphere | MATTTKKGSKNTKAKPRRAAVKSPPAKQAQTIADLRQELEARDHE |
Ga0209874_11166481 | 3300027577 | Groundwater Sand | MATKKGSKNKKARLRRPKMKSSVAEQAQTIVELRQQLAESLQRENATSEILQV |
Ga0209466_10396972 | 3300027646 | Tropical Forest Soil | MATTTRKGSKNTKAKPRRPVVKTSVPEQAQTIAELRQELEARNRDL |
Ga0209486_101527671 | 3300027886 | Agricultural Soil | MATPTKKGSKNTKAKPRRAVAKTSLAKQAHTIAELRQELSQSCSGRT |
Ga0209382_119204471 | 3300027909 | Populus Rhizosphere | MTTTTKKGSKAKTAKVLRPKLKTSAAEQPQTIVELRQQVAEALEREKATL |
Ga0310886_107216411 | 3300031562 | Soil | MATTTKKGSKNKEVRLRHPVVKTPVAEKAQTIAELRQQLEDRDQQ |
Ga0310813_106310131 | 3300031716 | Soil | MASTIKKGSKNNKPKVRPPKVKTSVAEQAQTIAELSQELEAR |
Ga0307469_123074221 | 3300031720 | Hardwood Forest Soil | MASTTKEDSKKSKAKPRRPAMKTSVAEQAQTIAEL |
Ga0310892_106115781 | 3300031858 | Soil | MATTTRKGSDNKKPKPRRPMVNTLVAEQGQTIAELRQQLVES |
Ga0310893_102986641 | 3300031892 | Soil | MATTPKKRSKHTKAKPRRPLVKTSLTEQAQTIAELRQELQDCKRQ |
Ga0310916_106126211 | 3300031942 | Soil | MATTTKKGSKNTKAKPRRPLVKTSLAKRAQTNAELRQELAESLKRENATATEL |
Ga0315281_105362193 | 3300032163 | Sediment | MTTPTKKSSKNAKAKPRPAAVKTSPAKLAQTIAELRQELGQSLQREN |
Ga0307471_1042188031 | 3300032180 | Hardwood Forest Soil | MARTTKKGSNNKKATLRRPVVKTSVAEQAQTIAALRQQLAQSLQRENVTAKELQDCRR |
Ga0316628_1014778001 | 3300033513 | Soil | MATTIKKGSKNNKARLRRPMVKTSEAEQAQTIAELRQQFA |
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