Metagenome / Metatranscriptome Family F061745

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061745
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	85 residues
Representative Sequence	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQAIAVALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSASFRSAASFL
Number of Associated Samples	109
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.44 %
% of genes near scaffold ends (potentially truncated)	23.66 %
% of genes from short scaffolds (< 2000 bps)	84.73 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (25.191 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.641 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.72% β-sheet: 0.00% Coil/Unstructured: 62.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02381	MraZ	43.51
PF01795	Methyltransf_5	33.59
PF05221	AdoHcyase	1.53
PF07963	N_methyl	1.53
PF08245	Mur_ligase_M	1.53
PF12850	Metallophos_2	0.76
PF14332	DUF4388	0.76
PF00149	Metallophos	0.76
PF03948	Ribosomal_L9_C	0.76
PF00905	Transpeptidase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	43.51
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	33.59
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	1.53
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	75.57 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.82 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.57 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.29 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.57 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0782444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101562414	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101563197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1921	Open in IMG/M
3300004114\|Ga0062593_100732508	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300004114\|Ga0062593_101018052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300004156\|Ga0062589_101561768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300004157\|Ga0062590_101685099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300004480\|Ga0062592_101077736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300004643\|Ga0062591_101720569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300005332\|Ga0066388_106771387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005438\|Ga0070701_10543564	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005441\|Ga0070700_100757054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300005444\|Ga0070694_100440463	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005457\|Ga0070662_100830955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005467\|Ga0070706_101605632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300005467\|Ga0070706_101694700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	576	Open in IMG/M
3300005529\|Ga0070741_10174762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2122	Open in IMG/M
3300005534\|Ga0070735_10166534	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005537\|Ga0070730_10041241	All Organisms → cellular organisms → Bacteria	3399	Open in IMG/M
3300005538\|Ga0070731_10001729	All Organisms → cellular organisms → Bacteria	22038	Open in IMG/M
3300005538\|Ga0070731_10958550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005541\|Ga0070733_11007236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300005544\|Ga0070686_101394767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005549\|Ga0070704_101536162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300005559\|Ga0066700_10222260	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005764\|Ga0066903_102570183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	987	Open in IMG/M
3300005829\|Ga0074479_10274502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1746	Open in IMG/M
3300005829\|Ga0074479_10385905	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300005829\|Ga0074479_10541136	Not Available	1187	Open in IMG/M
3300005829\|Ga0074479_10679188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300005836\|Ga0074470_10075236	All Organisms → cellular organisms → Bacteria	20398	Open in IMG/M
3300005842\|Ga0068858_102198895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300006031\|Ga0066651_10644153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300006046\|Ga0066652_100395258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300006046\|Ga0066652_100991838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	798	Open in IMG/M
3300006755\|Ga0079222_12546773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300006845\|Ga0075421_100660255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300006845\|Ga0075421_101535971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300006846\|Ga0075430_100235374	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300006847\|Ga0075431_100370196	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300006852\|Ga0075433_11501849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006854\|Ga0075425_100546899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300006865\|Ga0073934_10322927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300006903\|Ga0075426_10337541	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300006904\|Ga0075424_101863226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300006954\|Ga0079219_12339322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300006969\|Ga0075419_10543611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300007072\|Ga0073932_1026360	All Organisms → cellular organisms → Bacteria	3678	Open in IMG/M
3300007076\|Ga0075435_101308711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300009094\|Ga0111539_10748358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1138	Open in IMG/M
3300009100\|Ga0075418_10770420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1038	Open in IMG/M
3300009137\|Ga0066709_103545458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300009156\|Ga0111538_14064005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300009157\|Ga0105092_10108986	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300009162\|Ga0075423_10384400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300009162\|Ga0075423_12701046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300009448\|Ga0114940_10567643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009610\|Ga0105340_1551247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300009660\|Ga0105854_1269893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300009678\|Ga0105252_10286517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300009678\|Ga0105252_10529395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010039\|Ga0126309_10812040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300010391\|Ga0136847_12539626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300010391\|Ga0136847_13176206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010399\|Ga0134127_10404074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1352	Open in IMG/M
3300010400\|Ga0134122_10061068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2911	Open in IMG/M
3300010403\|Ga0134123_10100945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2296	Open in IMG/M
3300011120\|Ga0150983_12482765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300011120\|Ga0150983_14904544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300011120\|Ga0150983_15534890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300011399\|Ga0137466_1026882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300011406\|Ga0137454_1012770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300011406\|Ga0137454_1041630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300011425\|Ga0137441_1063993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300011436\|Ga0137458_1288944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300011437\|Ga0137429_1158441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300011439\|Ga0137432_1080371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300011439\|Ga0137432_1172993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012096\|Ga0137389_11797820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012231\|Ga0137465_1137935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300012232\|Ga0137435_1189821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012469\|Ga0150984_110277253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012905\|Ga0157296_10213844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012929\|Ga0137404_11594222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012944\|Ga0137410_10001130	All Organisms → cellular organisms → Bacteria	18351	Open in IMG/M
3300012971\|Ga0126369_12040552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300012981\|Ga0168316_143834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300016294\|Ga0182041_10787705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300016404\|Ga0182037_10808471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300017961\|Ga0187778_10010327	All Organisms → cellular organisms → Bacteria	5829	Open in IMG/M
3300017965\|Ga0190266_10125366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300019362\|Ga0173479_10556071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300019458\|Ga0187892_10025739	All Organisms → cellular organisms → Bacteria	5159	Open in IMG/M
3300019487\|Ga0187893_10005445	All Organisms → cellular organisms → Bacteria	22834	Open in IMG/M
3300020008\|Ga0193757_1023948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300020016\|Ga0193696_1141339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300020202\|Ga0196964_10096404	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300020202\|Ga0196964_10379551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300021357\|Ga0213870_1015466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2743	Open in IMG/M
3300021384\|Ga0213876_10013417	All Organisms → cellular organisms → Bacteria	4353	Open in IMG/M
3300021432\|Ga0210384_10066149	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300022756\|Ga0222622_10553925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300024219\|Ga0247665_1017687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300025311\|Ga0209343_10447990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300025918\|Ga0207662_10071856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2096	Open in IMG/M
3300026035\|Ga0207703_12300977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027573\|Ga0208454_1144886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300027867\|Ga0209167_10678392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027869\|Ga0209579_10001347	All Organisms → cellular organisms → Bacteria	20505	Open in IMG/M
3300027907\|Ga0207428_10592577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300027909\|Ga0209382_10741615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300027909\|Ga0209382_12152022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031226\|Ga0307497_10465943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1123231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300031421\|Ga0308194_10101584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300031716\|Ga0310813_10002583	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	10969	Open in IMG/M
3300031716\|Ga0310813_10207305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1610	Open in IMG/M
3300031716\|Ga0310813_12294068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300031720\|Ga0307469_10619482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300031731\|Ga0307405_10570415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300031754\|Ga0307475_10016779	All Organisms → cellular organisms → Bacteria	5039	Open in IMG/M
3300031770\|Ga0318521_10299176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300031954\|Ga0306926_11035752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300031962\|Ga0307479_10091394	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300031962\|Ga0307479_10486377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300032017\|Ga0310899_10698546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300032043\|Ga0318556_10621011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300032163\|Ga0315281_11109134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300032261\|Ga0306920_103032739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032261\|Ga0306920_103576489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300034662\|Ga0314783_096200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.68%
Host-Associated	Host-Associated	18.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.54%
Aquatic	Environmental → Aquatic	22.14%
Plants	Host-Associated → Plants	18.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.03%
Sediment	Environmental → Aquatic → Sediment	15.27%
Freshwater	Environmental → Aquatic → Freshwater	5.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.53%
Cave	Environmental → Terrestrial → Cave	1.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.53%
Geologic	Environmental → Terrestrial → Geologic	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.50%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Lake	Environmental → Aquatic → Freshwater → Lake	3.05%
Sand	Environmental → Terrestrial → Soil → Sand	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.53%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Mine	Environmental → Terrestrial → Geologic → Mine	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.53%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.53%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.76%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.76%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012981	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DT8	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021357	Freshwater microbial communities from subterranean cave lake in Wind Cave National Park, South Dakota, United States - WICALVC2017	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07824442	2228664022	Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQRDEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRSA
INPhiseqgaiiFebDRAFT_1015624142	3300000364	Soil	MADGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPXVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL*
INPhiseqgaiiFebDRAFT_1015631972	3300000364	Soil	MXGDGGKDSFEVVKEFIXXXGDRXPQXDEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRSAWIRAASL*
Ga0062593_1007325082	3300004114	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGLKAKPVRSASFRSAASFL*
Ga0062593_1010180522	3300004114	Soil	MAGEGGKDSFEVVKEFLTGLGDRRPQKEEVQTIAFALADIYQRLMRVRSIAPTVDVSDRMWELMAMVGLKAKPVRTMSSIRSAASFL*
Ga0062589_1015617682	3300004156	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGLKAKPVRSASFRSAASFL*
Ga0062590_1016850992	3300004157	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQAIAVALADIYQRLMRVRSIAPSVDVSERMWDLMSMVGLKAKPVRTSFRSAASFL*
Ga0062592_1010777362	3300004480	Soil	MAVDGGKDSFEVVKEFIMALGDRRPQRDEVAQIATALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0062591_1017205691	3300004643	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQREEVAQIATALADIYQRLMRVRTIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0066388_1067713872	3300005332	Tropical Forest Soil	MVGEGGKDSFEVVKEFLAGLGDRRPQRDEVQAIAVALADIYQRLMRVRSIAPTVDISERMWELMTMVGLKAKPVRTAWIRAA
Ga0070701_105435642	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRTSFRSAASFL*
Ga0070700_1007570542	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAVDGGKDSFEVVKEFIMGLGDRRPQREEVAQIATAMADIYQRLMRVRSIAPTVDVSDRMWELMAMVGLKAKPVRSTSFRSAASFL*
Ga0070694_1004404632	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAGEGGKDSFEVVKEFLSGLGDRQPRSEEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMAGLKAKPVRTSFRSAASFL*
Ga0070662_1008309552	3300005457	Corn Rhizosphere	EFIMGLGDRRPQREEVAQIATALADIYQRLMRVRTIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0070706_1016056321	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEREEGKDSFEVVKEFLTALGDRPAGRDEVQAIAPALKEIFERLMRVRRVAPSVDLSDRMWDLMSMAGIRRPGLSGGFR
Ga0070706_1016947002	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAGEGGKDSFEVVKEFLSGLGDRQPRSEEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRTSFRSAASFL*
Ga0070741_101747623	3300005529	Surface Soil	VAEPLVEGIGGGPRRREEGVMVGDGGKDSFEVVKEFLAGLGDRRPQKEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMAMVGLKAKPVRSTSFRSAASFL*
Ga0070735_101665342	3300005534	Surface Soil	MVGDGGKDSFEIVKEFIVALGDRRPQTEEVQSIAVALADIYQRLMRVRTIAPTVDVSDRIWELMGMVGLKAKPVRSTSFRSAASFL*
Ga0070730_100412414	3300005537	Surface Soil	MVGDGGKDSFEIVKEFITGLGDRRPQVEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL*
Ga0070731_100017292	3300005538	Surface Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQREEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL*
Ga0070731_109585502	3300005538	Surface Soil	MVILDSFEIVKEFIVALGDRRPQTEEVQSIAVALADIYQRLMRVRTIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL*
Ga0070733_110072362	3300005541	Surface Soil	MVGEGGKDSFEVVKEFLMGLGDRRPNKEEVQAIAPALADIYQRLLRVRSIAPSVDVSDRIWELMAMVGLKAKPVRSASFRSAASFL*
Ga0070686_1013947671	3300005544	Switchgrass Rhizosphere	MAVDGGKDSFEVVKEFIMGLGDRRPQREEVAQIATALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0070704_1015361621	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAVDGGKDSFEVVKEFIMALGDRRPQRDEVAQIATALADIYQRLMRVRSIAPTVDVSDRMWELMAMVGLKAKPVRSTSFRSAASFL*
Ga0066700_102222602	3300005559	Soil	MAGDGGKDSFEMVKEFLAGLGDRQPRREEVQAIATALADIYQRLMRVRSIAPSVDVSERMWELMSMVGLKAKPVRASFRSAASFL*
Ga0066903_1025701832	3300005764	Tropical Forest Soil	MAVDGGKDSFEVVKEFIMGLGDRRPTRDEVQQIAVALADIYQRLMRVRSIAPSVDVSDRMWELMSMVGLKAKPVRSASFRSAASFL*
Ga0074479_102745023	3300005829	Sediment (Intertidal)	AEPRVEGLTPPAEEEGDMVGEGGKDSFEVVKEFLVGLGDRRPRTDEVQQIAVALADIYQRLMRVRSIAPSVDVSERMWELMGMVGLKAKPVRTAFRSAASFL*
Ga0074479_103859056	3300005829	Sediment (Intertidal)	MEREEGKDSFEVVKEFLTALGDRPARRDEVQAIAPALREIFERLMRVRSVAPTVDLSDRMWNLMEMVGIRKPGRAGGFRSAASFL*
Ga0074479_105411361	3300005829	Sediment (Intertidal)	TEERGASMEREEKDSFEVVKEFVTALGERRPEREEVQSIAWALKDINDRLMRVRAVAPTVDLSDRMWALMEMVGIRAKPHRASGGFRSAASFL*
Ga0074479_106791882	3300005829	Sediment (Intertidal)	MEREEKDSFEVVKEFVTSLGERRPQREEVQAIAWALKDINDRLMRVRAVAPTVDLSDRMWALMEMVGIRAKPHRSGGFRSAASFL*
Ga0074470_1007523621	3300005836	Sediment (Intertidal)	MAGEGGKDSFEVVKEFITGLGDRRPQKEEVQTIAFALADIYQRLMRVRSIAPTVDVSDRMWDLMAMVGLKAKPVRTLSSIRNAASFL*
Ga0068858_1021988951	3300005842	Switchgrass Rhizosphere	MAGEGGKDSFEVVKEFLTGLGDRRPQKEEVQTIAFALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRTMSSIRSAASFL*
Ga0066651_106441532	3300006031	Soil	MAGEGGKDSFEVVKEFLSGLGDRQPRREDVAPITAALADIYQRLMRVRSIAPSVDVSERMWELMALVGLKAKPVRTSFRSAASFL*
Ga0066652_1003952581	3300006046	Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQRDEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRSAWIRAASL*
Ga0066652_1009918382	3300006046	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMALVGLKAKPVRTSFRSAASFL*
Ga0079222_125467731	3300006755	Agricultural Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRTIAPSVDVSDRMWELMAMVGLKAKPVRASFRSAASFL*
Ga0075421_1006602552	3300006845	Populus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVLTIATALADIYQRLMRVRSIAPSVDLSDRMWELMALAGLKAKPVRSSFRSAASFL*
Ga0075421_1015359711	3300006845	Populus Rhizosphere	DSFEVVKEFIMGLGDRQPQREDVQQIAIALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSATSFRSAASFL*
Ga0075430_1002353742	3300006846	Populus Rhizosphere	MVGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIAVALADIYQRLMRVRSIAPSVDLSDRMWELMAMAGLKAKPVRSSFRSAASFL*
Ga0075431_1003701962	3300006847	Populus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIATALADIYQRLMRVRSIAPSVDLSDRMWELMALAGLKAKPVRSSFRSAASFL*
Ga0075433_115018491	3300006852	Populus Rhizosphere	VGRRREEGDMAVDGGKDSFEVVKEFIMGLGDRRPQREEVQQIATALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRTASFRSAASFL*
Ga0075425_1005468992	3300006854	Populus Rhizosphere	GVMAVDGGKDSFEVVKEFIMGLGDRRPQREEVAQIATALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0073934_103229271	3300006865	Hot Spring Sediment	MAQLGGGKDSFEVVREFLAKVGDRRPGRDEVQEIGEALKDIFQRLMRVRSIAPTVDLSDRMWELMELAGIKAKPA
Ga0075426_103375411	3300006903	Populus Rhizosphere	VESVTRSPEERGGVMAGEGGKDSFEVVKEFLAGLGDRQPRKEDVQTIALALADIYQRLMRVRSIAPSVDLSERMWELMAMVGLKAKPVRTSFRSAASFL*
Ga0075424_1018632262	3300006904	Populus Rhizosphere	MAVDGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGLKAKPVRSASF
Ga0079219_123393221	3300006954	Agricultural Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRTMSSIRSAASFL*
Ga0075419_105436111	3300006969	Populus Rhizosphere	KEFLAGLGDRRPQRDEVQAIAVALADIYQRLMRVRSIAPSVDLSDRMWELMAMVGLKAKPVRSSFRSAASFL*
Ga0073932_10263606	3300007072	Hot Spring Sediment	MEAEEGKDSFEIVRDFLLSLGERKPGRDEVQAIAPALRDIYERLMRVRAVAPSVDLSDRLWELMEMVWLKARPARRTAFFRAASL*
Ga0075435_1013087112	3300007076	Populus Rhizosphere	MAGEAGKDSFEVVKEFLAGLGDRQPRREEVLTIAAALADIYQRLMRVRSIAPTVDVSERMWELMAMAGLKAKPVRTSFRSAASFL*
Ga0111539_107483582	3300009094	Populus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVLTIATALADIYQRLMRVRSIAPSVDLSDRMWELMAMVGLKAKPVRSSFRSAASFL*
Ga0075418_107704202	3300009100	Populus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIATALADIYQRLMRVRSIAPSVDLSDRMWELMSLAGLKAKPVRSSFRSAASFL*
Ga0066709_1035454581	3300009137	Grasslands Soil	MDGEGGKDSFEVVKEFLSGLGDRRPRNEEVQAIAVALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0111538_140640052	3300009156	Populus Rhizosphere	SQSGDVAEARLERLARSGGEREEGSMAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRTSFRSAASFL*
Ga0105092_101089862	3300009157	Freshwater Sediment	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVLTIATALADIYQRLMRVRSIAPSVDLSDRMWELMSMVGLKAKPVRSSFRSAASFL*
Ga0075423_103844003	3300009162	Populus Rhizosphere	MAVDGGKDSFEVVKEFIMGLGDRRPQREEVQQIATALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRTASFRSAASFL*
Ga0075423_127010461	3300009162	Populus Rhizosphere	MAVEGGKDSFEVVKEFLSGLGDRQPRKEEVQTIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGLKAKPVRSASFRSAASFL*
Ga0114940_105676432	3300009448	Groundwater	MAEVEGGKDSFEVVKGFLGELGDGKPRAEDVLRIKGALVDIHDRLMRVRKIAPSVDLSERIWELMVLAGLKAAPVRAARSFRSAASFL*
Ga0105340_15512471	3300009610	Soil	MVGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIATALADIYQRLMRVRSIAPSVDLSDRMWELMSMVGLKAKPVRSSFRSAASFL*
Ga0105854_12698931	3300009660	Permafrost Soil	MAGEGAKDSFEVVKEFITGLGDRRPQKEEVQTIAFALADIYQRLMRVRSIAPTVDVSDRMWDLMAMVGLKAKPVRTMSSIRNAASFL*
Ga0105252_102865172	3300009678	Soil	MVQGGKDSFEVVKEFLLGVGERKIGREEVSGIAPALFDIYQRLMRVRAVAPTVDVSDRLWGLMELVGIKAKPVRANSFRSAASFL*
Ga0105252_105293951	3300009678	Soil	MAAVDGGKDSFEVVKSFLAGVGERRPSREEVQAIAPALVDIYQRLMRVRAVAPTVDLSERLWGLMEIVGLKARPVRTASFRSAASFL*
Ga0126309_108120401	3300010039	Serpentine Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRRDEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRTSFRSAASFL*
Ga0136847_125396262	3300010391	Freshwater Sediment	MEREEGKDSFEVVKEFLTALGDRPARREEVQAIAPALKEIFERLMRVRKVAPTVDLSDRMWDLMALAGIRRPGLGGGFRSAASFL*
Ga0136847_131762062	3300010391	Freshwater Sediment	MEREEKDSFEVVKEFITALGERRPEREEVQSIAWALKDINDRLMRVRAVAPTVDLSDRMWSLMEMVGVKAKPHRSGGFRSAASFL*
Ga0134127_104040742	3300010399	Terrestrial Soil	MAVDGGKDSFEVVKEFIMALGDRRPQREEVAQIATALADIYQRLMRVRSIAPTVDVSDRMWELMAMVGLKAKPVRSTSFRSAASFL*
Ga0134122_100610685	3300010400	Terrestrial Soil	MAGEGGKDSFEVVKEFLSGLGDRQPRREDVAPITAALADIYQRLMRVRSIAPSVDVSERMWELMSLAGLKAKPVRTSFRSAASFL*
Ga0134123_101009454	3300010403	Terrestrial Soil	MAGEGGKDSFEVVKEFLVGLGDRRPRHEEVATIAVALADIYQRLMRVRSIAPSVDVSERMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0150983_124827652	3300011120	Forest Soil	MVGDGGKDSFEVVKEFITGLGDRRPQVEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKVKPVRSTSFRSAASFL*
Ga0150983_149045441	3300011120	Forest Soil	MVGEGEKDSFEVVKEFLVSLGDRRPRTDEVQQIAVALADIYQRLMRVRSIAPSVDVSERMWELMGMVGLKAKPVRGASFRSAASFL*
Ga0150983_155348902	3300011120	Forest Soil	MVGDGGKDSFEIVKEFITGLGDRRPQTEEVQAIAVALADIYQRLMRVRTIAPTVDVSDRMWELMVMVGLKAKPVRSTSFRSAASFL*
Ga0137466_10268822	3300011399	Soil	VKSFLAGVGERRPSREEVQAIAPALVDIYQRLMRVRAVAPTVDLSERLWGLMEIVGLKARPVRTASFRSAASFL*
Ga0137454_10127702	3300011406	Soil	MMVEGGKDSFEVVREFLVGVGERRPERDEVQTIAPALFDIYQRLMRVRAVAPTVDVSERLWSLMEVVGIKAKPVRAASFRSAASFL*
Ga0137454_10416302	3300011406	Soil	MAENEGAKDSFEVVKEFLASLGERRPEREDALKVVWALKDIHERLMRVRSIAPTVDLSERMWELMSLAGLKAKPVRSPSAFRSAATFL*
Ga0137441_10639932	3300011425	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRDEVQQIAIALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSATSFRSAASFL*
Ga0137458_12889442	3300011436	Soil	MAGEGGKDSFEVVKEFLSGLGDRRPQREEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMSLAGLKAKPVRTSFRSAASFL*
Ga0137429_11584411	3300011437	Soil	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIATALADIYQRLMRVRSIAPSVDLSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0137432_10803712	3300011439	Soil	KEFLAGLGDRRPQRDEVQTIATALADIYQRLMRVRSIAPSVDLSDRMWELMSLAGLKAKPVRSSFRSAASFL*
Ga0137432_11729932	3300011439	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRDEVQQIAVALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0137389_117978202	3300012096	Vadose Zone Soil	MIGDGGKDSFEVVKEFITGLGDRRPQLDEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL*
Ga0137465_11379351	3300012231	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRDEVQQIAIALADIYQRLMRVRSIAPTVDVSERMWELMSMVGLKAKPVRSSFRSAASFL*
Ga0137435_11898212	3300012232	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRDEVQQIATALADIYQRLMRVRSIAPSVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL*
Ga0150984_1102772532	3300012469	Avena Fatua Rhizosphere	MVGDGGKDSFEVVKEFIAGLGDRRPQKDEVQAIAMALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKVKPVRSTWIRSAASL*
Ga0157296_102138442	3300012905	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRREEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWDLMSMVGLKAKPVRTSFR
Ga0137404_115942221	3300012929	Vadose Zone Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQKDEVQGIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKVKPVRSTWIRSAASL*
Ga0137410_100011305	3300012944	Vadose Zone Soil	MVGEGGKDSFEVVKEFLSGMGDRRPQRDEVQAIAVPLADIYQRLMRVRTIAPTVDVSERMWELMGMVGLKIKPVRSASSFRSAASFL*
Ga0126369_120405521	3300012971	Tropical Forest Soil	VKEFIMGLGDRRPERSEVEQIATALADIYQRLMRVRSIAPSVDGSDRMWELMSMVGLKAKPVRSASFRSAASFL*
Ga0168316_1438342	3300012981	Weathered Mine Tailings	MAGEGGKDSFEVVKEFLAGLGDRQPRKEEVQTIAMALADIYQRLMRVRSIAPSVDVSDRMWELMSMVGLKAKPVRASFRSAASFL*
Ga0182041_107877051	3300016294	Soil	MIGDGGKDSFEVVKEFLAGLGDRRPQKEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKIKPVRSTSFRSAASFL
Ga0182037_108084711	3300016404	Soil	MEREEGRDSFEVVKEFLTALGDRPARRDEVQVIAPALREIFERLMKVRAVAPTVDLSDRMWTLMEMVGIRKPGRAGGFRSAASFL
Ga0187778_100103277	3300017961	Tropical Peatland	MEREEGKDSFEVVKEFLTALGDRPARREEVQAIVPALREIYERLMRVKKVAPTVDLSDRMWDLMSMAGIRRPGLAGGFRSAASFL
Ga0190266_101253662	3300017965	Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQRDEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRSAWIRAASL
Ga0173479_105560712	3300019362	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRREEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRSSFRSAASFL
Ga0187892_100257393	3300019458	Bio-Ooze	METEGGKDSFEAVKDFLLALGDRKPAREEVQAIAGALRDIYGRLLRVRAVAPTVDLSARMWELMELAGLRAKPVRPTGFRSAASFL
Ga0187893_1000544523	3300019487	Microbial Mat On Rocks	MAEVEGGKDSFEVVKEFLAAVGDGKPGREDALRIAPALNDIHRRLMRVRKVAPSVDLSERMWELMELVGLKAAPVAAPSAVRPFRSAATFL
Ga0193757_10239482	3300020008	Soil	KDSFEVVKEFIVTLGDRRPQREEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRSSFRSAASFL
Ga0193696_11413391	3300020016	Soil	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQAIAVALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSASFRSAASFL
Ga0196964_100964042	3300020202	Soil	MAVQGGKDSFEVVKEFLARVGDRRPGRDEVAEIAPALLDIYQRLMRVRVVAPTVDLSERLWSLMEIVGIKAKPVRAASFRSAASFL
Ga0196964_103795512	3300020202	Soil	MIQGGKDSFEVVKEFLLGVGERKLGREEVSGIAPALFDIYQRLMRVRMVAPTVDVSDRLWGLMELVGIKAKPVRANSFRSAASFL
Ga0213870_10154663	3300021357	Freshwater	MGEEKEGKDSFEVVKEFLEVLDGRIPQREEAQAIAGALNDIYQRLMRVRAVAPTVDVSGRMWELMEMVGIKAKPARAASFRSAASFL
Ga0213876_100134175	3300021384	Plant Roots	VGDGGKDSFEVVKEFISSLGDRRPQREEVESIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL
Ga0210384_100661494	3300021432	Soil	MEREEGKDSFEVVKEFLTALGDRPARREEVQAIAPALREIYERLMRVRKVAPTVDLSDRMWDLMATVGIRRPGLSGGFRSAASFL
Ga0222622_105539252	3300022756	Groundwater Sediment	MAGEGGKDSFEVVKEFIVTLGDRRPQREEVQSIAVALADIYQRLMRVRSIAPSVDVSERMWELMSMVGLKAKPVRSSFRSAASFL
Ga0247665_10176871	3300024219	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGL
Ga0209343_104479901	3300025311	Groundwater	MEREEKDSFEVVKEFVTALGERRPEREEVQAIAWALKDINDRLMRVRAVAPTVDLSDRMWALMEMVGIRAKPHRASGGFRSAASFL
Ga0207662_100718564	3300025918	Switchgrass Rhizosphere	VDGGKDSFEVVKEFIMGLGDRRPQRHEVQEIAVALADIYQRLMRVRSIAPSVDVSDRMWELMTMVGLKAKPVRSASFRSAASFL
Ga0207703_123009772	3300026035	Switchgrass Rhizosphere	MVGDGGKDSFEVVKEFLTGLGDRRPQKEEVQTIAFALADIYQRLMRVRSIAPTVDVSDRMWELMTMVGLKAKPVRTMSSIRSAASFL
Ga0208454_11448862	3300027573	Soil	MAAVDGGKDSFEVVKSFLAGVGERRPSREEVQAIAPALVDIYQRLMRVRAVAPTVDLSERLWGLMEIVGLKARPVRTASFRSAASFL
Ga0209167_106783922	3300027867	Surface Soil	MVGEGGKDSFEVVKEFLMGLGDRRPNKEEVQAIAPALADIYQRLLRVRSIAPSVDVSDRIWELMAMVGLKAKPVRSASFRSAASFL
Ga0209579_100013477	3300027869	Surface Soil	MVGDGGKDSFEVVKEFIAGLGDRRPQREEVQSIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL
Ga0207428_105925772	3300027907	Populus Rhizosphere	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVLTIATALADIYQRLMRVRSIAPSVDLSDRMWELMAMVGLKAKPVRSSFRSAASFL
Ga0209382_107416152	3300027909	Populus Rhizosphere	KDSFEVVKEFIMGLGDRQPQREDVQQIAIALADIYQRLMRVRSIAPTVDVSERMWELMGMVGLKAKPVRSATSFRSAASFL
Ga0209382_121520222	3300027909	Populus Rhizosphere	REEGDMAGEGGKDSFEVVKEFLAGLGDRRPQRDEVLTIATALADIYQRLMRVRSIAPSVDLSDRMWELMALAGLKAKPVRSSFRSAASFL
Ga0307497_104659432	3300031226	Soil	MAGEGGKDSFEVVKEFIMGLGDRRPQKEEVQAIAFALADIYQRLMRVRSIAPTVDVSDRMWDLMAMVGLKAKPVRTMSSIRN
(restricted) Ga0255312_11232311	3300031248	Sandy Soil	MAGEGGKDSFEVVKEFLVGLGDRRPRTEEVATIATALADIYQRLMRVRTIAPTVDVSERMWELMSMVGLKAKPVRSSFRSAASFL
Ga0308194_101015841	3300031421	Soil	MVGDGGKDSFEVVKEFITGLGDRRPQLDEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL
Ga0310813_1000258317	3300031716	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQTIAVALADIYQRLMRVRSIAPSVDVSERMWELMGMVGLKAKPVRTSFRSAASFL
Ga0310813_102073052	3300031716	Soil	MAGEGGKDSFEVVKEFLAGLGDRQPRKDEVQAIAVALADIYQRLMRVRSIAPSVDVSERMWDLMAMVGLKAKPVRTSFRSAASFL
Ga0310813_122940682	3300031716	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPQREEVAQIATALADIYQRLMRVRTIAPTVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL
Ga0307469_106194821	3300031720	Hardwood Forest Soil	MAGEGGKDSFEVVKEFIVTLGDRRPQREEVQSIAVALADIYQRLMRVRSIAPSVDVSERMWELMAMVGLKAKPVRSSFRSAASFL
Ga0307405_105704152	3300031731	Rhizosphere	MIQGGKDSFEVVKEFLLGVGERKIGRDEVSGIAPALFDIYQRLMRVRAVAPTVDVSDRLWGLMELVGIKSKPVRANSFRSAASFL
Ga0307475_100167795	3300031754	Hardwood Forest Soil	MVGDGGKDSFEIVKEFITGLGDRRPQTEEVQAIAVALADIYQRLMRVRTIAPTVDVSDRMWELMVMVGLKAKPVRSTSFRSAASFL
Ga0318521_102991762	3300031770	Soil	MVGDGGKDSFEVVKEFLAGLGDRRPQKEEVQAIAVALADIYQRLMGMVGLKIKPVRSTSFRSAASFL
Ga0306926_110357522	3300031954	Soil	DMVGDGGKDSFEVVKEFLAGLGDRRPQKEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKIKPVRSTSFRSAASFL
Ga0307479_100913945	3300031962	Hardwood Forest Soil	MVGDGGKDSFEIVKEFITGLGDRRPQTEEVQAIAVALADIYQRLMRVRTIAPTVDVSDRMWELMVMVGLKAKPVRSTSF
Ga0307479_104863772	3300031962	Hardwood Forest Soil	MVGDGGKDSFEIVKEFITGLGDRRPQVEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKAKPVRSTSFRSAASFL
Ga0310899_106985461	3300032017	Soil	MVQGGKDSFEVVKEFLLGVGERKIGREEVSGIAPALFDIYQRLMRVRAVAPTVDVSDRLWGLMELVGIKAK
Ga0318556_106210111	3300032043	Soil	KDSFEVVKEFLAGLGDRRPQKEEVQAIAVALADIYQRLMRVRSIAPTVDVSDRMWELMGMVGLKIKPVRSTSFRSAASFL
Ga0315281_111091342	3300032163	Sediment	MVGEGGKDSFEVVKEFLVGLGDRRPRTDEVQQIAVALADIYQRLMRVRSIAPSVDVSERMWELMGMVGLKAKPVRTAF
Ga0306920_1030327391	3300032261	Soil	REEGVMAVDGGTDSFEVVKEFLAGLGDRQPRKEEVQTIAVALADIYQRLLRVRSIAPSVDLSDRMWELMAMVGLKAKPVRASFRSAASFL
Ga0306920_1035764892	3300032261	Soil	MAVDGGKDSFEVVKEFIMGLGDRRPERHEVEAIATALADIYQRLMRVRTIAPSVDVSDRMWELMGMVGLKAKPVRSASFRSAASFL
Ga0314783_096200_361_618	3300034662	Soil	MAGEGGKDSFEVVKEFLAGLGDRRPQRDEVQTIAVALADIYQRLMRVRSIAPSVDLSDRMWELMSLVGLKAKPVRSSFRSAASFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters