Metagenome / Metatranscriptome Family F061700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	63 residues
Representative Sequence	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGERQRGFERTPPARKYEEETCW
Number of Associated Samples	83
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	6.87 %
% of genes near scaffold ends (potentially truncated)	36.64 %
% of genes from short scaffolds (< 2000 bps)	67.18 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (100.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.718 % of family members)
Environment Ontology (ENVO)	Unclassified (56.489 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.09% Coil/Unstructured: 73.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01408	GFO_IDH_MocA	16.03
PF01402	RHH_1	8.40
PF04185	Phosphoesterase	1.53
PF01738	DLH	1.53
PF01923	Cob_adeno_trans	0.76
PF13419	HAD_2	0.76
PF13245	AAA_19	0.76
PF00005	ABC_tran	0.76
PF00692	dUTPase	0.76
PF03176	MMPL	0.76
PF13439	Glyco_transf_4	0.76
PF00801	PKD	0.76
PF00578	AhpC-TSA	0.76
PF00150	Cellulase	0.76
PF01243	Putative_PNPOx	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.53
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.76
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.76
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.76
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.76
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.76
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	100.00 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1000208	All Organisms → cellular organisms → Archaea	7197	Open in IMG/M
3300002558\|JGI25385J37094_10000002	All Organisms → cellular organisms → Archaea	41513	Open in IMG/M
3300002558\|JGI25385J37094_10045214	All Organisms → cellular organisms → Archaea	1498	Open in IMG/M
3300002558\|JGI25385J37094_10081758	All Organisms → cellular organisms → Archaea	1000	Open in IMG/M
3300002558\|JGI25385J37094_10149497	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300002558\|JGI25385J37094_10217298	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300002560\|JGI25383J37093_10215440	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300002561\|JGI25384J37096_10000482	All Organisms → cellular organisms → Archaea	11627	Open in IMG/M
3300002561\|JGI25384J37096_10075793	All Organisms → cellular organisms → Archaea	1225	Open in IMG/M
3300002561\|JGI25384J37096_10096677	All Organisms → cellular organisms → Archaea	1038	Open in IMG/M
3300002908\|JGI25382J43887_10084663	All Organisms → cellular organisms → Archaea	1698	Open in IMG/M
3300002909\|JGI25388J43891_1009519	All Organisms → cellular organisms → Archaea	1849	Open in IMG/M
3300002909\|JGI25388J43891_1070016	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300002911\|JGI25390J43892_10062257	All Organisms → cellular organisms → Archaea	868	Open in IMG/M
3300002911\|JGI25390J43892_10065688	All Organisms → cellular organisms → Archaea	841	Open in IMG/M
3300002912\|JGI25386J43895_10000280	All Organisms → cellular organisms → Archaea	9434	Open in IMG/M
3300002912\|JGI25386J43895_10013873	All Organisms → cellular organisms → Archaea	2327	Open in IMG/M
3300005167\|Ga0066672_10641441	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300005171\|Ga0066677_10210188	All Organisms → cellular organisms → Archaea	1092	Open in IMG/M
3300005171\|Ga0066677_10790777	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300005171\|Ga0066677_10853800	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300005174\|Ga0066680_10558777	All Organisms → cellular organisms → Archaea	719	Open in IMG/M
3300005177\|Ga0066690_10073893	All Organisms → cellular organisms → Archaea	2139	Open in IMG/M
3300005178\|Ga0066688_10481133	All Organisms → cellular organisms → Archaea	801	Open in IMG/M
3300005180\|Ga0066685_10281835	All Organisms → cellular organisms → Archaea	1149	Open in IMG/M
3300005181\|Ga0066678_10015186	All Organisms → cellular organisms → Archaea	3894	Open in IMG/M
3300005186\|Ga0066676_10486932	All Organisms → cellular organisms → Archaea	837	Open in IMG/M
3300005446\|Ga0066686_10018365	All Organisms → cellular organisms → Archaea	3860	Open in IMG/M
3300005468\|Ga0070707_100000047	All Organisms → cellular organisms → Archaea	105077	Open in IMG/M
3300005468\|Ga0070707_100041222	All Organisms → cellular organisms → Archaea	4418	Open in IMG/M
3300005468\|Ga0070707_100073092	All Organisms → cellular organisms → Archaea	3306	Open in IMG/M
3300005536\|Ga0070697_100059299	All Organisms → cellular organisms → Archaea	3116	Open in IMG/M
3300005540\|Ga0066697_10158051	All Organisms → cellular organisms → Archaea	1340	Open in IMG/M
3300005540\|Ga0066697_10802230	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300005552\|Ga0066701_10272249	All Organisms → cellular organisms → Archaea	1048	Open in IMG/M
3300005554\|Ga0066661_10154868	All Organisms → cellular organisms → Archaea	1403	Open in IMG/M
3300005554\|Ga0066661_10698791	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300005558\|Ga0066698_10493199	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300005568\|Ga0066703_10457802	All Organisms → cellular organisms → Archaea	763	Open in IMG/M
3300005568\|Ga0066703_10876857	All Organisms → cellular organisms → Archaea	512	Open in IMG/M
3300005568\|Ga0066703_10909709	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300005586\|Ga0066691_10065688	All Organisms → cellular organisms → Archaea	1978	Open in IMG/M
3300006796\|Ga0066665_10799403	All Organisms → cellular organisms → Archaea	744	Open in IMG/M
3300006797\|Ga0066659_10465534	All Organisms → cellular organisms → Archaea	1007	Open in IMG/M
3300006797\|Ga0066659_10561166	All Organisms → cellular organisms → Archaea	923	Open in IMG/M
3300007255\|Ga0099791_10031692	All Organisms → cellular organisms → Archaea	2322	Open in IMG/M
3300007255\|Ga0099791_10355180	All Organisms → cellular organisms → Archaea	702	Open in IMG/M
3300007258\|Ga0099793_10040101	All Organisms → cellular organisms → Archaea	2029	Open in IMG/M
3300007258\|Ga0099793_10056886	All Organisms → cellular organisms → Archaea	1740	Open in IMG/M
3300007258\|Ga0099793_10721172	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300007265\|Ga0099794_10280280	All Organisms → cellular organisms → Archaea	862	Open in IMG/M
3300009012\|Ga0066710_102360665	All Organisms → cellular organisms → Archaea	772	Open in IMG/M
3300010126\|Ga0127482_1029485	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300010303\|Ga0134082_10045707	All Organisms → cellular organisms → Archaea	1672	Open in IMG/M
3300010304\|Ga0134088_10148994	All Organisms → cellular organisms → Archaea	1113	Open in IMG/M
3300010325\|Ga0134064_10048623	All Organisms → cellular organisms → Archaea	1295	Open in IMG/M
3300010333\|Ga0134080_10037144	All Organisms → cellular organisms → Archaea	1876	Open in IMG/M
3300010335\|Ga0134063_10139476	All Organisms → cellular organisms → Archaea	1120	Open in IMG/M
3300011269\|Ga0137392_10959003	All Organisms → cellular organisms → Archaea	703	Open in IMG/M
3300011270\|Ga0137391_10072861	All Organisms → cellular organisms → Archaea	2953	Open in IMG/M
3300012199\|Ga0137383_10011268	All Organisms → cellular organisms → Archaea	5994	Open in IMG/M
3300012199\|Ga0137383_10119698	All Organisms → cellular organisms → Archaea	1920	Open in IMG/M
3300012202\|Ga0137363_10110545	All Organisms → cellular organisms → Archaea	2104	Open in IMG/M
3300012202\|Ga0137363_10251466	All Organisms → cellular organisms → Archaea	1436	Open in IMG/M
3300012203\|Ga0137399_10039675	All Organisms → cellular organisms → Archaea	3332	Open in IMG/M
3300012203\|Ga0137399_11320612	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300012206\|Ga0137380_10084748	All Organisms → cellular organisms → Archaea	2898	Open in IMG/M
3300012208\|Ga0137376_10043448	All Organisms → cellular organisms → Archaea	3645	Open in IMG/M
3300012210\|Ga0137378_10230770	All Organisms → cellular organisms → Archaea	1723	Open in IMG/M
3300012210\|Ga0137378_11847865	All Organisms → cellular organisms → Archaea	507	Open in IMG/M
3300012349\|Ga0137387_10087561	All Organisms → cellular organisms → Archaea	2152	Open in IMG/M
3300012351\|Ga0137386_11252280	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300012361\|Ga0137360_10116312	All Organisms → cellular organisms → Archaea	2072	Open in IMG/M
3300012918\|Ga0137396_10012905	All Organisms → cellular organisms → Archaea	5176	Open in IMG/M
3300012918\|Ga0137396_10014659	All Organisms → cellular organisms → Archaea	4898	Open in IMG/M
3300012918\|Ga0137396_10048136	All Organisms → cellular organisms → Archaea	2914	Open in IMG/M
3300012918\|Ga0137396_10111029	All Organisms → cellular organisms → Archaea	1968	Open in IMG/M
3300012918\|Ga0137396_10196669	All Organisms → cellular organisms → Archaea	1482	Open in IMG/M
3300012918\|Ga0137396_11025961	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300012918\|Ga0137396_11197031	All Organisms → cellular organisms → Archaea	536	Open in IMG/M
3300012918\|Ga0137396_11200371	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300012976\|Ga0134076_10268398	All Organisms → cellular organisms → Archaea	732	Open in IMG/M
3300014150\|Ga0134081_10194147	All Organisms → cellular organisms → Archaea	687	Open in IMG/M
3300014154\|Ga0134075_10238880	All Organisms → cellular organisms → Archaea	785	Open in IMG/M
3300015241\|Ga0137418_10091282	All Organisms → cellular organisms → Archaea	2751	Open in IMG/M
3300017656\|Ga0134112_10467780	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300018431\|Ga0066655_10054936	All Organisms → cellular organisms → Archaea	2070	Open in IMG/M
3300018468\|Ga0066662_10002988	All Organisms → cellular organisms → Archaea	8049	Open in IMG/M
3300018468\|Ga0066662_10163936	All Organisms → cellular organisms → Archaea	1702	Open in IMG/M
3300018468\|Ga0066662_10793415	All Organisms → cellular organisms → Archaea	918	Open in IMG/M
3300024330\|Ga0137417_1251517	All Organisms → cellular organisms → Archaea	958	Open in IMG/M
3300025922\|Ga0207646_10000028	All Organisms → cellular organisms → Archaea	227768	Open in IMG/M
3300025922\|Ga0207646_10004035	All Organisms → cellular organisms → Archaea	16219	Open in IMG/M
3300025922\|Ga0207646_10064952	All Organisms → cellular organisms → Archaea	3258	Open in IMG/M
3300025922\|Ga0207646_10819033	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300026277\|Ga0209350_1000269	All Organisms → cellular organisms → Archaea	32733	Open in IMG/M
3300026296\|Ga0209235_1033560	All Organisms → cellular organisms → Archaea	2624	Open in IMG/M
3300026296\|Ga0209235_1137473	All Organisms → cellular organisms → Archaea	998	Open in IMG/M
3300026297\|Ga0209237_1002400	All Organisms → cellular organisms → Archaea	11243	Open in IMG/M
3300026297\|Ga0209237_1015058	All Organisms → cellular organisms → Archaea	4539	Open in IMG/M
3300026298\|Ga0209236_1115644	All Organisms → cellular organisms → Archaea	1189	Open in IMG/M
3300026308\|Ga0209265_1233696	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300026309\|Ga0209055_1001794	All Organisms → cellular organisms → Archaea	13898	Open in IMG/M
3300026309\|Ga0209055_1160252	All Organisms → cellular organisms → Archaea	734	Open in IMG/M
3300026309\|Ga0209055_1169443	All Organisms → cellular organisms → Archaea	690	Open in IMG/M
3300026310\|Ga0209239_1003999	All Organisms → cellular organisms → Archaea	8532	Open in IMG/M
3300026315\|Ga0209686_1010235	All Organisms → cellular organisms → Archaea	3922	Open in IMG/M
3300026315\|Ga0209686_1019609	All Organisms → cellular organisms → Archaea	2701	Open in IMG/M
3300026315\|Ga0209686_1042178	All Organisms → cellular organisms → Archaea	1701	Open in IMG/M
3300026317\|Ga0209154_1253237	All Organisms → cellular organisms → Archaea	607	Open in IMG/M
3300026334\|Ga0209377_1103141	All Organisms → cellular organisms → Archaea	1179	Open in IMG/M
3300026335\|Ga0209804_1156368	All Organisms → cellular organisms → Archaea	1013	Open in IMG/M
3300026342\|Ga0209057_1152089	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300026523\|Ga0209808_1000805	All Organisms → cellular organisms → Archaea	15710	Open in IMG/M
3300026527\|Ga0209059_1126763	All Organisms → cellular organisms → Archaea	966	Open in IMG/M
3300026538\|Ga0209056_10347153	All Organisms → cellular organisms → Archaea	977	Open in IMG/M
3300026550\|Ga0209474_10643899	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300026552\|Ga0209577_10344982	All Organisms → cellular organisms → Archaea	1098	Open in IMG/M
3300027671\|Ga0209588_1137920	All Organisms → cellular organisms → Archaea	776	Open in IMG/M
3300027748\|Ga0209689_1103612	All Organisms → cellular organisms → Archaea	1463	Open in IMG/M
3300031720\|Ga0307469_10000354	All Organisms → cellular organisms → Archaea	17174	Open in IMG/M
3300031720\|Ga0307469_10069195	All Organisms → cellular organisms → Archaea	2329	Open in IMG/M
3300031753\|Ga0307477_10378104	All Organisms → cellular organisms → Archaea	972	Open in IMG/M
3300031820\|Ga0307473_11044949	All Organisms → cellular organisms → Archaea	599	Open in IMG/M
3300031962\|Ga0307479_10015956	All Organisms → cellular organisms → Archaea	7060	Open in IMG/M
3300031962\|Ga0307479_11233774	All Organisms → cellular organisms → Archaea	710	Open in IMG/M
3300032180\|Ga0307471_100942625	All Organisms → cellular organisms → Archaea	1030	Open in IMG/M
3300032180\|Ga0307471_101400492	All Organisms → cellular organisms → Archaea	859	Open in IMG/M
3300032180\|Ga0307471_102826004	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300032180\|Ga0307471_103709000	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300032205\|Ga0307472_101065712	All Organisms → cellular organisms → Archaea	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.31%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.11%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.11%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_100020810	3300002557	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGIVRLDEGEHPRGSERTPPVRKYEEETCW*
JGI25385J37094_1000000233	3300002558	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRIKASGVVRVDESEPQRGFERNPPARKYEEQTCW*
JGI25385J37094_100452142	3300002558	Grasslands Soil	MCDKCHRFFLISYEKNEKGEVVEVGHELDIQVKSSGVVRLDEGEHQRGFERNPPTRKYQEETCW*
JGI25385J37094_100817581	3300002558	Grasslands Soil	MCDKCHRFFVIRYEKNEKGEVVEIGHELDISVKSSGVVRVDEGVQQRGLERTPPARKYEEETCW*
JGI25385J37094_101494971	3300002558	Grasslands Soil	MCDKCHRFFVITYEKNERGEVVEIGHELDIHVKSSGAVLVDEGEPQRSFERNPPARKYEEQTCW*
JGI25385J37094_102172982	3300002558	Grasslands Soil	HRFFVITYEKNERGEVVEIAHELDIRVKSSGAVREDEGEPQRSLERDPPARKYEEQTCW*
JGI25383J37093_102154402	3300002560	Grasslands Soil	ADEKHSHSLTRSTIQMCDKCHRFFVITYEKNERGEVVEIGHELDIHVKSSGAVLVDEGEPQRSFERNPPARKYEEQTCW*
JGI25384J37096_100004829	3300002561	Grasslands Soil	MCDKCHRFFVITYEKNERGEVVEIGHELDIRVKSSAAVRVDEGEPQRSFERNPPARKYEEQTCW*
JGI25384J37096_100757932	3300002561	Grasslands Soil	LISYEKNEKGEVVEVGHELDIQVKSSGVVRLDEGEHQRGFERNPPTRKYQEETCW*
JGI25384J37096_100966773	3300002561	Grasslands Soil	QMPPLLRNYLRENERGEVVEIGHELDIHVKSSGAVLVDEGEPQRSFERNPPARKYEEQTCW*
JGI25382J43887_100846632	3300002908	Grasslands Soil	MCDKCHRFFLISYEKNEKGEVVEIGHELDIQVKSSGGVRLDEGEHQRGSERTPPVRKYEEETCW*
JGI25388J43891_10095191	3300002909	Grasslands Soil	MCEKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW*
JGI25388J43891_10700162	3300002909	Grasslands Soil	MCEKCHRFFVITYEKNERGEIVEIGHELDIRIKSSGTVRVDEGEPQQSLERNP
JGI25390J43892_100622572	3300002911	Grasslands Soil	MCEKCHRFFVITYEKNERGEIVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPP
JGI25390J43892_100656881	3300002911	Grasslands Soil	MCEKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPP
JGI25386J43895_1000028012	3300002912	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGXELDIRIKASGVVRVDESEPQRGFERNPPARKYEEQTCW*
JGI25386J43895_100138731	3300002912	Grasslands Soil	SLTRSTILMCDKCHRFFLISYEKNEKGEVVEVGHELDIQVKSSGVVRLDEGEHQRGFERNPPTRKYQEETCW*
Ga0066672_106414412	3300005167	Soil	MCDKCHCFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPARKYEEETCW*
Ga0066677_102101881	3300005171	Soil	MCDKCHCFFVISYEKNEKGEFVEIGHELDIRVKSSGVVRLDEGEHMRGSERSPPAKKYEEKTCW*
Ga0066677_107907771	3300005171	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPARKYEEQTCW*
Ga0066677_108538002	3300005171	Soil	TRATIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGIVRLDEGEHPRSSERTPPVRKYEEETCW*
Ga0066680_105587772	3300005174	Soil	MCDKCHRFFVISYEKNEKGEIVEIGHELDILIKSSGVVRVDEGEGQRGFERTPPARKYQEETCW*
Ga0066690_100738932	3300005177	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGSERSPPAKKYEEKTCW*
Ga0066688_104811332	3300005178	Soil	VITYEKNERGEVLEIAHELDIRVKSSGAVREDEGEPQRSLERDPPARKYEEQTCW*
Ga0066685_102818351	3300005180	Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARKYEEETCW*
Ga0066678_100151864	3300005181	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEAQRGFERTPPARKYQEETCW*
Ga0066676_104869322	3300005186	Soil	MCEKCHRFFIISYEKNEKGGVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKY
Ga0066686_100183653	3300005446	Soil	MCEKCHRFFIISYEKNEKGEVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKYEEQTCW*
Ga0070707_10000004793	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCHRFFVINYEKNEKGEVVEVGHELDIRVKSSGVVRVEGDEQQEGSERNPPIRKYQEETCW*
Ga0070707_1000412221	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCHHFFVISYEKNEKGEIVEIGHELDIRVKSSGVVRVDEGEQRRGFERTPPARKYEEETCW*
Ga0070707_1000730922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCRRFFVISYEKNEKGEVVEIGHELDIRIISSGAVRVDEGEPHRGFERNPPARRYEEQTCW*
Ga0070697_1000592994	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MCDRCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVREDEGEQRGGFERTPPARKYEEETCW*
Ga0066697_101580512	3300005540	Soil	MCDKCHRFFLVSYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERTPPVRKYEEETCW*
Ga0066697_108022301	3300005540	Soil	TRATIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVRRYEEETCW*
Ga0066701_102722491	3300005552	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGERLRGSERTPPVRRYEEETCW*
Ga0066661_101548681	3300005554	Soil	MCDKCHCFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGFERSPPARKYEEETCW*
Ga0066661_106987911	3300005554	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPARKYEEETCW*
Ga0066698_104931991	3300005558	Soil	MCDKCHRFFVITYEKNERGEVVEIGHELDIHVKSSGAVLVDEGEPHRSFERNPPARKYEEQTCW*
Ga0066703_104578022	3300005568	Soil	MCDKCHRFFLISYEKNEKGEVVEIGHELDIRVKSSGGVRLDEGEHQRGSERTPPVRKYEEETCW*
Ga0066703_108768571	3300005568	Soil	MCDKCHRFFVITYEKNERGEVVEIAHELDIRVKSSGAVREDEGEPQRSLERDPPVRKYEEQTCW*
Ga0066703_109097092	3300005568	Soil	NLTRSTILMCDKCHRFFLISYEKNEKGEVVEIGHELDIQVKSSGGVRLDEGEHQRGIERTPPVRKYEEETCW*
Ga0066691_100656883	3300005586	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEPQRGFERTPPARKY
Ga0066665_107994031	3300006796	Soil	QMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEAQRGFERTPPARKYQEETCW*
Ga0066659_104655341	3300006797	Soil	EKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW*
Ga0066659_105611661	3300006797	Soil	KHAHSLTRSTIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEAQRGFERTPPARKYQEETCW*
Ga0099791_100316922	3300007255	Vadose Zone Soil	MYEKNEKGEVVEIGHELDISVKSSGVVRVDEGVQQRGLERTPPARKYEEETCW*
Ga0099791_103551802	3300007255	Vadose Zone Soil	MCEKCHRFFVISYEKNEKGEVVEIGHELDIRIRSSGVVRVDEGEEQRGFERTPLARKYQEETCW*
Ga0099793_100401012	3300007258	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGIERTLPARKYEEETCW*
Ga0099793_100568861	3300007258	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDISVKSSGVVRVDEGVQQRGLERTPPARKYEEETCW*
Ga0099793_107211722	3300007258	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDDSEQQRGFERTPPTRKYEEETCW*
Ga0099794_102802802	3300007265	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEIVEIGHELDIRIKSSGVVREDEGEQQRGFERTPPARKYQEETCW*
Ga0066710_1023606652	3300009012	Grasslands Soil	MCEKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW
Ga0127482_10294851	3300010126	Grasslands Soil	EKNERGEIVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW*
Ga0134082_100457072	3300010303	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVRRYEEETCW*
Ga0134088_101489942	3300010304	Grasslands Soil	TRSTIQMCEKCHRFFIISYEKNEKGEVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKYEEQTCW*
Ga0134064_100486232	3300010325	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRDKTSGIVRLDEGEHPRGSERTPPVRKYEEETCW*
Ga0134080_100371442	3300010333	Grasslands Soil	MCEKCHRFFVITYEKNERGEIVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW*
Ga0134063_101394762	3300010335	Grasslands Soil	DKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARKYEEETCW*
Ga0137392_109590032	3300011269	Vadose Zone Soil	ISYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGEQQSGFERNVSARKFEEETCW*
Ga0137391_100728613	3300011270	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRIKSSGLVRVDEGEEQRGFERTPPARKYQEETCW*
Ga0137383_100112684	3300012199	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEPQRGFERTPPARKYQEETCW*
Ga0137383_101196983	3300012199	Vadose Zone Soil	CHRFFLISYEKNEKGEVVEIGHELDIRVKSSGGVRLDEGEHARGSERTPPVRKYEEETCW
Ga0137363_101105453	3300012202	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELEIHVKSSGIVRVDEGEQRRGFERTPPARKYEEETCW*
Ga0137363_102514662	3300012202	Vadose Zone Soil	MCDKCHRFFVIRYEKNEKGEVVEIGHELDISVKSSGVVRVDEGVQQRGLERTPPARKYEEET
Ga0137399_100396752	3300012203	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGETVEIGRELDIRVKSSGVIRADEEEWQRRLQLNRPTRKNLEETCW*
Ga0137399_113206122	3300012203	Vadose Zone Soil	MCDKCHCFFVISYEKNEKGEVVEVGHELDIRVKSSGVVRVDDGEQQRGFERTPPTRKYEEETCW*
Ga0137380_100847482	3300012206	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVAEIGHELDIRVKSSGIVRLDEGEHPRGSERTPPVRKYEEETCW*
Ga0137376_100434483	3300012208	Vadose Zone Soil	MCDKCHRFFLISYEKNEKGEVVEIGHELDIRVKSSGGVRLDEGEHPRGSERTPPVRKYEEETCW*
Ga0137378_102307703	3300012210	Vadose Zone Soil	HRFFLISYEKNEKGEVVEIGHELDIRVKSSGGVRLDEGEHPRGSERTPPVRKYEEETCW*
Ga0137378_118478651	3300012210	Vadose Zone Soil	RFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW*
Ga0137387_100875613	3300012349	Vadose Zone Soil	MCDKCHCFFVITYEKNERGEVVEIGHELDIRVKSSGAVRVDEGEPQRSFERNPPARKYEEHT
Ga0137386_112522802	3300012351	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRIKASGVVRVDESEPQRGFERNPLARKYEEQTCW*
Ga0137360_101163121	3300012361	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARKYKEETCW*
Ga0137396_100129054	3300012918	Vadose Zone Soil	MCDKCHCFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDDGEQQRGFERTPPTRKYEEETCW*
Ga0137396_100146593	3300012918	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIRIRSSGVVRVDEGEEQRGFERTPPARKYQEETCW*
Ga0137396_100481366	3300012918	Vadose Zone Soil	FFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARKYEEETCW*
Ga0137396_101110291	3300012918	Vadose Zone Soil	HSLTRSTIQMCEKCHRFFVLSYEKNEKGEVVEIGHELDIRIKSSGVVRVDEDEQQRGSERAPPARKYEERTCW*
Ga0137396_101966691	3300012918	Vadose Zone Soil	MCEKCHHFFIIGYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGEQHRGFERTPPARKYQEETCW*
Ga0137396_110259612	3300012918	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGETVEVGHELDIRVKSSGIIRTDEEEWQRNLQLNRPTRKNLEETCW*
Ga0137396_111970312	3300012918	Vadose Zone Soil	FFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGIERTLPARKYEEETCW*
Ga0137396_112003712	3300012918	Vadose Zone Soil	MCEKCHRFFVLSYEKNEKGEVVEIGHELDIRIESSGVVRVDEDEQQRGSERAPPARKYEERTCW*
Ga0134076_102683982	3300012976	Grasslands Soil	EKNEKGEVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKYEEQTCW*
Ga0134081_101941472	3300014150	Grasslands Soil	MCEKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYE
Ga0134075_102388801	3300014154	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARK
Ga0137418_100912821	3300015241	Vadose Zone Soil	MCEKCHRFFVLSYEKNEKGEVVEIGHELDIRIRSSGVVRVDEGEEQRGFERTPLARKYQEETCW*
Ga0134112_104677802	3300017656	Grasslands Soil	EKHSHSLTRSTIQMCEKCHRFFVITYEKNERGEIVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEEETCW
Ga0066655_100549363	3300018431	Grasslands Soil	MCEKCHRFFVITYEKNERGEVVEIGHELDIRIKSSGTVRVDEGEPQQSLERNPPTRKYEE
Ga0066662_100029883	3300018468	Grasslands Soil	MCDKCHRFFVITYEKNERGEVVEIGHELDIHVKSSGAVLVDEGEPQRSFERNPPARKYEEQTCW
Ga0066662_101639361	3300018468	Grasslands Soil	RFFLISYEKNEKGEVVEVGHELDIQVKSSGVVRLDEGEHQRGFERNPPTRKYQEETCW
Ga0066662_107934151	3300018468	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGIVRLDEGEHPRGSERTPPVRKYEEETCW
Ga0137417_12515171	3300024330	Vadose Zone Soil	MCEKCHRFFVISYEKNEKGEVVEIGHELDIRIRSSGVVRVDEGEEQRGFERTPLARKYQEETCW
Ga0207646_1000002818	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCHRFFVINYEKNEKGEVVEVGHELDIRVKSSGVVRVEGDEQQEGSERNPPIRKYQEETCW
Ga0207646_1000403522	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCRRFFVISYEKNEKGEVVEIGHELDIRIISSGAVRVDEGEPHRGFERNPPARRYEEQTCW
Ga0207646_100649525	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCDKCHHFFVISYEKNEKGEIVEIGHELDIRVKSSGVVRVDEGEQRRGFERTPPARKYEEETCW
Ga0207646_108190331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SLTRSIIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVREDEGEQRRGFERTPPARKYEEETCW
Ga0209350_10002698	3300026277	Grasslands Soil	MCEKCHRFFIISYEKNEKGEVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKYEEQTCW
Ga0209235_10335602	3300026296	Grasslands Soil	MCDKCHRFFVIRYEKNEKGEVVEIGHELDISVKSSGVVRVDEGVQQRGLERTPPARKYEEETCW
Ga0209235_11374732	3300026296	Grasslands Soil	MCEKCHRFFIISYEKNEKGEVVEIGHELDIRVKSSGIVRVDEGEQQRGFERIPPTRKYEEQT
Ga0209237_10024002	3300026297	Grasslands Soil	MCDKCHRFFLISYEKNEKGEVVEVGHELDIQVKSSGVVRLDEGEHQRGFERNPPTRKYQEETCW
Ga0209237_10150582	3300026297	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEPQRGFERTPPARKYQEETCW
Ga0209236_11156442	3300026298	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVRSSGVVRVDEGEAQRGFERTPPARKYQEETCW
Ga0209265_12336961	3300026308	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVRRYEEETCW
Ga0209055_100179414	3300026309	Soil	MCDKCHRFFLISYEKNEKGEVVEIGHELDIRVKSSGGVRLDEGEHQRGSERTPPVRKYEEETCW
Ga0209055_11602522	3300026309	Soil	FFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGSERSPPAKKYEEKTCW
Ga0209055_11694431	3300026309	Soil	MCDKCHCFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGFERSPPARKYEEETCW
Ga0209239_100399911	3300026310	Grasslands Soil	MCDKCHRFFVISYEKNEKGEVVEVGHELDIHVKSSGIVRVDEGEQRRGFERTPPARKYEEETCW
Ga0209686_10102353	3300026315	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPARKYEEQTCW
Ga0209686_10196093	3300026315	Soil	MCDKCHCFFVISYEKNEKGEFVEIGHELDIRVKSSGVVRLDEGEHMRGSERSPPAKKYEEKTCW
Ga0209686_10421782	3300026315	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVKRYEEETCW
Ga0209154_12532372	3300026317	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPAKKYEEKTCW
Ga0209377_11031412	3300026334	Soil	CDKCHRFFVITYEKNERGEVVEIAHELDIRVKSSGAVREDEGEPQRSLERDPPARKYEEQTCW
Ga0209804_11563681	3300026335	Soil	SLTRATIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGIVRLDEGEHPRGSERTPPVRKYEEETCW
Ga0209057_11520892	3300026342	Soil	MCDKCHRFFLVSYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERTPPVRKYEEETCW
Ga0209808_100080516	3300026523	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPV
Ga0209059_11267631	3300026527	Soil	CFFVISYEKNEKGEFVEIGHELDIRVKSSGVVRLDEGEHMRGSERSPPAKKYEEKTCW
Ga0209056_103471531	3300026538	Soil	SLTRATIQMCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVRRYEEETCW
Ga0209474_106438991	3300026550	Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEPPRGSERTPPVRRYEEETCW
Ga0209577_103449822	3300026552	Soil	MRDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHPRGSERTPPVRRYEEETCW
Ga0209588_11379201	3300027671	Vadose Zone Soil	MCDKCHRFFVISYEKNEKGEIVEIGHELDIRIKSSGVVREDEGEQQRGFERTPPARKYQEETCW
Ga0209689_11036122	3300027748	Soil	MCDKCHCFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRLDEGEHQRGVERSPPARKYEEQTCW
Ga0307469_100003542	3300031720	Hardwood Forest Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGEQHRGFERTPPARKYEEETCW
Ga0307469_100691954	3300031720	Hardwood Forest Soil	FFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGERQRGFERTPPARKYEEETCW
Ga0307477_103781042	3300031753	Hardwood Forest Soil	MCDKCHRFFIISYEKNEKGEVVEVGYELDIQVKSSGAVRVDEGDRWKGPERSPLVRRYEEETCW
Ga0307473_110449492	3300031820	Hardwood Forest Soil	MCDKCHRFFIISYEKNEKGEVVEVGHELDIQVKSSGAVRVDEGDQWKGPERSPPLRRYEEETCW
Ga0307479_100159568	3300031962	Hardwood Forest Soil	MCDKCHRFFIISYEKNEKGEVVEVGYELDIQVKSSGAVRVDEGDRWKGPERSPPVRRYEEETCW
Ga0307479_112337741	3300031962	Hardwood Forest Soil	MCDKCHRFFIISYERNEKGEVVEVGHELDIQVKSSGAVRVDEADQRKGPERSLPVRRYEEETCW
Ga0307471_1009426252	3300032180	Hardwood Forest Soil	MCDKCHRFFVISYEKNEKGEVVEVGYELDIRVKSSGVVRVDEGERHRGFERTPPARKYEEETCW
Ga0307471_1014004922	3300032180	Hardwood Forest Soil	MCDKCHRFFVISYEKNEKGEVVEIGHELDIRVKSSGVVRVDEGERQRGFERTPPARKYEEETCW
Ga0307471_1028260042	3300032180	Hardwood Forest Soil	KHAHSLTRSVIQMCDKCHRFFVISYEKNEKGEVVEVGHELDIRVKSSGVVRVDEGEPRRGFERTPPARRYEDETCW
Ga0307471_1037090001	3300032180	Hardwood Forest Soil	MCDKCHRFFIISYEKNEKGEAVEVGHELDIRVKSSGVVRVEGDEQQTGSERNPATRKYQEETCW
Ga0307472_1010657122	3300032205	Hardwood Forest Soil	MCDKCHRFFIISYEKNEKGEVVEVGYELDIQVKSFGAVRVDEGDRWKGPERSPPVRRYEEETCW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences