Metagenome / Metatranscriptome Family F061615

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061615
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	79 residues
Representative Sequence	MPAARDAARHAGTLYRRGFGRLRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Number of Associated Samples	105
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.35 %
% of genes near scaffold ends (potentially truncated)	29.01 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.626 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.664 % of family members)
Environment Ontology (ENVO)	Unclassified (31.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.672 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.22% β-sheet: 0.00% Coil/Unstructured: 31.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07690	MFS_1	9.16
PF00127	Copper-bind	7.63
PF00175	NAD_binding_1	5.34
PF14016	DUF4232	3.82
PF13462	Thioredoxin_4	3.05
PF00392	GntR	2.29
PF01434	Peptidase_M41	1.53
PF00196	GerE	1.53
PF11239	DUF3040	1.53
PF07883	Cupin_2	1.53
PF08808	RES	1.53
PF02518	HATPase_c	0.76
PF00933	Glyco_hydro_3	0.76
PF08241	Methyltransf_11	0.76
PF01699	Na_Ca_ex	0.76
PF00815	Histidinol_dh	0.76
PF01544	CorA	0.76
PF01098	FTSW_RODA_SPOVE	0.76
PF14018	DUF4234	0.76
PF00085	Thioredoxin	0.76
PF05653	Mg_trans_NIPA	0.76
PF03918	CcmH	0.76
PF13473	Cupredoxin_1	0.76
PF13271	DUF4062	0.76
PF01061	ABC2_membrane	0.76
PF00248	Aldo_ket_red	0.76
PF00528	BPD_transp_1	0.76
PF00264	Tyrosinase	0.76
PF01323	DSBA	0.76
PF13515	FUSC_2	0.76
PF09335	SNARE_assoc	0.76
PF13360	PQQ_2	0.76
PF01464	SLT	0.76
PF00578	AhpC-TSA	0.76
PF13592	HTH_33	0.76
PF12680	SnoaL_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.53
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	1.53
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.76
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.76
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.76
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.76
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.76
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.76
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.76
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.63 %
Unclassified	root	N/A	21.37 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.89 %
Unclassified	root	N/A	21.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.34 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.12 %
Unclassified	root	N/A	21.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.05 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.22 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	38.93 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.93 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.76 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.93 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.76 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.93 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.76 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.93 %
Unclassified	root	N/A	21.37 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.29 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.76 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0648689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1932121	Not Available	543	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101278353	Not Available	520	Open in IMG/M
3300000550\|F24TB_11242733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300000559\|F14TC_101937655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300000890\|JGI11643J12802_10588680	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300000890\|JGI11643J12802_11640294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1089	Open in IMG/M
3300000891\|JGI10214J12806_10565091	Not Available	715	Open in IMG/M
3300000891\|JGI10214J12806_11215447	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300000953\|JGI11615J12901_12538795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300000956\|JGI10216J12902_104247882	Not Available	532	Open in IMG/M
3300000956\|JGI10216J12902_104250148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300000956\|JGI10216J12902_107607607	Not Available	673	Open in IMG/M
3300000956\|JGI10216J12902_120508556	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300001333\|A21PFW6_1023363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300002568\|C688J35102_120819940	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300003319\|soilL2_10013249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3023	Open in IMG/M
3300004114\|Ga0062593_101628950	Not Available	702	Open in IMG/M
3300004114\|Ga0062593_103033215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300004156\|Ga0062589_100084507	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300004463\|Ga0063356_100037433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4753	Open in IMG/M
3300004479\|Ga0062595_100041900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2009	Open in IMG/M
3300004479\|Ga0062595_100594123	Not Available	860	Open in IMG/M
3300004480\|Ga0062592_100936541	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300004480\|Ga0062592_102013777	Not Available	571	Open in IMG/M
3300004643\|Ga0062591_100588697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300005093\|Ga0062594_100684329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300005093\|Ga0062594_101009453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300005332\|Ga0066388_100487250	Not Available	1871	Open in IMG/M
3300005332\|Ga0066388_101711530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1113	Open in IMG/M
3300005332\|Ga0066388_107720302	Not Available	539	Open in IMG/M
3300005440\|Ga0070705_100094545	Not Available	1871	Open in IMG/M
3300005445\|Ga0070708_100844333	Not Available	860	Open in IMG/M
3300005445\|Ga0070708_101361381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300005467\|Ga0070706_101159418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300005468\|Ga0070707_100616236	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005468\|Ga0070707_101949874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005471\|Ga0070698_100002587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19928	Open in IMG/M
3300005518\|Ga0070699_100897354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300005983\|Ga0081540_1004324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10880	Open in IMG/M
3300005983\|Ga0081540_1010075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	6432	Open in IMG/M
3300005985\|Ga0081539_10415603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300006058\|Ga0075432_10008790	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300006852\|Ga0075433_10370392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1265	Open in IMG/M
3300006852\|Ga0075433_11570988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300006854\|Ga0075425_100131834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2857	Open in IMG/M
3300006854\|Ga0075425_101322169	Not Available	817	Open in IMG/M
3300006871\|Ga0075434_102113376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300006871\|Ga0075434_102388418	Not Available	531	Open in IMG/M
3300006880\|Ga0075429_101437623	Not Available	600	Open in IMG/M
3300006904\|Ga0075424_100062261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3903	Open in IMG/M
3300009012\|Ga0066710_102019151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300009094\|Ga0111539_10194162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2368	Open in IMG/M
3300009147\|Ga0114129_10487519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1612	Open in IMG/M
3300009162\|Ga0075423_11238199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300009162\|Ga0075423_11575114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300009162\|Ga0075423_11912007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300010039\|Ga0126309_10019330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2955	Open in IMG/M
3300010043\|Ga0126380_10946323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300010359\|Ga0126376_11355366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300010362\|Ga0126377_10005997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	9075	Open in IMG/M
3300010398\|Ga0126383_10322575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1553	Open in IMG/M
3300010868\|Ga0124844_1199280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300011107\|Ga0151490_1822060	Not Available	558	Open in IMG/M
3300012010\|Ga0120118_1016751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2024	Open in IMG/M
3300012882\|Ga0157304_1113189	Not Available	510	Open in IMG/M
3300012898\|Ga0157293_10286274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012910\|Ga0157308_10003634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2939	Open in IMG/M
3300012923\|Ga0137359_11513789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012938\|Ga0162651_100011418	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300012941\|Ga0162652_100046670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300012951\|Ga0164300_10270708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	873	Open in IMG/M
3300012957\|Ga0164303_11473576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	513	Open in IMG/M
3300012958\|Ga0164299_10202906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300012960\|Ga0164301_11537404	Not Available	550	Open in IMG/M
3300012985\|Ga0164308_11079064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	718	Open in IMG/M
3300013758\|Ga0120147_1057885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300013764\|Ga0120111_1057220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300014827\|Ga0120171_1005315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6822	Open in IMG/M
3300015371\|Ga0132258_12408895	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1318	Open in IMG/M
3300015373\|Ga0132257_104567321	Not Available	504	Open in IMG/M
3300015374\|Ga0132255_100040454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5991	Open in IMG/M
3300018027\|Ga0184605_10112525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300018027\|Ga0184605_10272915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300018061\|Ga0184619_10297014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300018061\|Ga0184619_10375161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300018061\|Ga0184619_10379978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300018071\|Ga0184618_10013521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2527	Open in IMG/M
3300018072\|Ga0184635_10185425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300018465\|Ga0190269_10717017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300019356\|Ga0173481_10040856	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300019361\|Ga0173482_10404670	Not Available	635	Open in IMG/M
3300019875\|Ga0193701_1033554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300021080\|Ga0210382_10082910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1315	Open in IMG/M
3300021344\|Ga0193719_10287427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300021445\|Ga0182009_10322689	Not Available	783	Open in IMG/M
3300022915\|Ga0247790_10015707	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300025901\|Ga0207688_11036837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300025910\|Ga0207684_10233159	Not Available	1588	Open in IMG/M
3300025927\|Ga0207687_10169929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1681	Open in IMG/M
3300025933\|Ga0207706_11508158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300027873\|Ga0209814_10130016	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300028707\|Ga0307291_1106510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300028713\|Ga0307303_10018223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300028718\|Ga0307307_10177761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300028722\|Ga0307319_10299494	Not Available	532	Open in IMG/M
3300028744\|Ga0307318_10064174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300028771\|Ga0307320_10027848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2054	Open in IMG/M
3300028771\|Ga0307320_10475945	Not Available	504	Open in IMG/M
3300028791\|Ga0307290_10145932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300028796\|Ga0307287_10313229	Not Available	593	Open in IMG/M
3300028811\|Ga0307292_10509343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028824\|Ga0307310_10375531	Not Available	702	Open in IMG/M
3300028824\|Ga0307310_10494782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300028875\|Ga0307289_10027788	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300028878\|Ga0307278_10022436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2912	Open in IMG/M
3300028878\|Ga0307278_10022482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2908	Open in IMG/M
3300028881\|Ga0307277_10485977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300031152\|Ga0307501_10171427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300031547\|Ga0310887_10909448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300031854\|Ga0310904_11281725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031908\|Ga0310900_11312681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300031996\|Ga0308176_10975717	Not Available	893	Open in IMG/M
3300031996\|Ga0308176_11153071	Not Available	821	Open in IMG/M
3300032180\|Ga0307471_102519000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300032205\|Ga0307472_100803924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300032783\|Ga0335079_11604796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300032828\|Ga0335080_10072307	All Organisms → cellular organisms → Bacteria	3824	Open in IMG/M
3300033412\|Ga0310810_11235182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300033551\|Ga0247830_11149669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300034819\|Ga0373958_0107558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.15%
Host-Associated	Host-Associated	19.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.05%
Plants	Host-Associated → Plants	19.85%
Aquatic	Environmental → Aquatic	6.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.11%
Sediment	Environmental → Aquatic → Sediment	5.34%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.78%
Loam	Environmental → Terrestrial → Soil → Loam	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.58%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.58%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.29%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.53%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06486891	2228664021	Soil	MAAGRDAVRHARARYDRTGARLRHPIRTIEAEAEHLREVEREGESAETPFVAILGIILFLLPIVAVVLGLAFAAYYLAR
ICChiseqgaiiDRAFT_19321212	3300000033	Soil	GGDASVYDGVMAAARDAARHARALYRRAFAWLRRSVRGIEAEAEHLREIEREGESAETPVIAIVGLILFLLPIVLLIFGLAFAAYYLAR*
INPhiseqgaiiFebDRAFT_1012783532	3300000364	Soil	MAAGRDAARHAGTRYRKALTRLRHPVRGVEAEAEHLRTVEQEGESGETPFIAILGIVLFLLPIFLVVLGLALAAYYLAR*
F24TB_112427332	3300000550	Soil	MAAARDAARHAGTLYRRVLGRVRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
F14TC_1019376551	3300000559	Soil	RDAARHAGPLYRRGFGRLRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLACGISDL*
JGI11643J12802_105886802	3300000890	Soil	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
JGI11643J12802_116402943	3300000890	Soil	MAAGRDAVRHARARYDRTGARLRHPIRTIEAEAEHLREVEREGESAETPFVAILGIILFLLPIVAVVLGLAFAAYYLAR*
JGI10214J12806_105650912	3300000891	Soil	VAAVRDAARHAGTLYRKALAWVLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR*
JGI10214J12806_112154472	3300000891	Soil	MAAGRDAAQHAGTLYRKAFNRLRHPVREIEAEVEHLREVEREGESGETPFIAILGIILFLLPVVAVLLGLAFAAYYLAT*
JGI11615J12901_125387951	3300000953	Soil	MPAARDAARHAGTLYRRGFGRLRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
JGI10216J12902_1042478822	3300000956	Soil	MAASRDAVRHAGSIYRRALPWLRHPVQQVEAEAEHLHEIERKGESAETPLVAIFGIILFLLPIVLLILGLAFAAYYLAG*
JGI10216J12902_1042501482	3300000956	Soil	ARHAGTLYRKALSWLRRPVREVEAEAHHLHEVEREGESGETSFIAILGIVIFLLPIVLLVLGLAFAAYYLAG*
JGI10216J12902_1076076071	3300000956	Soil	MAAGRDAARHAGTIYRKAFNSLRHSAREIEADVEHLREVEREGESGETPFIAILGIILFLLPIVALVLGLAFAAYYLAS*
JGI10216J12902_1205085561	3300000956	Soil	EQMAAAREALRHAGGIYRRALPWLRHPVKKVEAEAEHLIEIEREGESAETPLVVLFGVVLFLLPIVLLILGLAFAAYYLAR*
A21PFW6_10233632	3300001333	Permafrost	MAAGRDAATHAGTLYRKAFGFLRRPVQEIEAEVEHLLEVEREGESETTPFIAIVGLIFFLTPIVLVILGLSFAAYYLAR*
C688J35102_1208199402	3300002568	Soil	MTRRRFLPRAIVREAHHLHEVERLGESAETPLIAIAGLVLFLGPVFLVVVALAFLAYYLAL*
soilL2_100132493	3300003319	Sugarcane Root And Bulk Soil	MTLMPSGRNAARHAGSIYRRLFSRLRHPIKELEAEAEHLIEIEKKGESAETPLVAIVGIILFLLPIVLLILGLAFAAYYLTN*
Ga0062593_1016289502	3300004114	Soil	VAAVGDAARHAGTLYRKALAWVLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR*
Ga0062593_1030332151	3300004114	Soil	MAAGRDAAQHAGTLYRKAFNRLRHPVREIEAEVEHLREVEREGESAETPFIAILGIILFLLPVVAVLLGLAFAAYYLAT*
Ga0062589_1000845071	3300004156	Soil	KDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0063356_1000374331	3300004463	Arabidopsis Thaliana Rhizosphere	AVYDDAMPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0062595_1000419003	3300004479	Soil	MAAGRDAVRHARARYGRTGVRLRHPIRTIEAEAEHLREVEREGESAETPFVAILGIVLFLLPIVAVVLGLAFAAYYLAR*
Ga0062595_1005941232	3300004479	Soil	MAAGRDGARHAGALYRKAFARLRHPFREIEAEVEHLREVEREGESGETPFIAIAGIVLFLLPIVLLVLGLAFAAYYLTR*
Ga0062592_1009365412	3300004480	Soil	RDAAQHAGTLYRKAFNRLRHPVREIEAEVEHLREVEREGESGETPFIAILGIILFLLPVVAVLLGLAFAAYYLAT*
Ga0062592_1020137772	3300004480	Soil	PVAAVRDAARHAGTLYRKALASLLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR*
Ga0062591_1005886972	3300004643	Soil	MGVGREAVRHAGGIYRKVLPWGVRHPVQELEHLQEVEQEGTSAATPLVAILGIILFLLPIVALILGLAFAAFYLAG*
Ga0062594_1006843292	3300005093	Soil	VGVGRDAVRHAGGIYRKVLPWGARHPVQELEHLQEVEHEGTSAATPLVAILGIILFLLPIVALILGLAFAAYYLAG*
Ga0062594_1010094531	3300005093	Soil	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0066388_1004872501	3300005332	Tropical Forest Soil	HATSLYRKAFAWLRHPLRGIEAEAEHLHEVERTGESAETPAIAIFGLILFLLPIVLLILGLSFLAYYLAR*
Ga0066388_1017115302	3300005332	Tropical Forest Soil	MAPMAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAILGIVLFLIPIVALVLGVAFAAYYLAT*
Ga0066388_1077203022	3300005332	Tropical Forest Soil	LYDGAMAAGRDAVRHARGRYDKTFARLRHPVRGIEAEVGHLREIEREGESGETPFVAILGIVLFLLPIVIVVLGLSFAAYYLAS*
Ga0070705_1000945453	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFTRLRHPVREVETEVEHLREVEREGESGETPFIAILGVVLFLLPIVALLLGLSFAAYYLTR*
Ga0070708_1008443332	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFTRLRHPVREVETEVEHLREVEREGESGETPFIAILGVVLFLLPIVALL
Ga0070708_1013613812	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFNRLRHPVREVETEVEHLRQVEREGESGETPFIAILGVVLFLLPIVALLLGLSFAAYYLTR*
Ga0070706_1011594182	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFTRLRHPVREVETEVEHLREVEREGESGETPFIAIFGVVLFLLPIVALLLGLSFAAYYLTR*
Ga0070707_1006162362	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTYDGAMAAGRDAATRAGTHYRRLFAVLRFPARGIEAEAEHLRRVEQAGESGETPFIAILGLILFLFPIFLLMAGLAFAAYYLAR*
Ga0070707_1019498742	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFTRLRHPVRVIETEVEHLREVEREGESGETPFIAIFGVVLFLLPIVALLLGLSFAAYYLTR*
Ga0070698_1000025877	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGRDAATHAGTLYRKMFAVLRIPVRKIEAEAEHLREVEQTGESGETPFIAILGLILFLFPIFLLMAGLAFAAYYLAR*
Ga0070699_1008973542	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFNRLGHPVREVETEVEHLRQVEREGESGETPFIAILGVVLFLLPIVALLLGISFAAYYLTR*
Ga0081540_100432413	3300005983	Tabebuia Heterophylla Rhizosphere	MEAMAAGKDAVRHARARYGKTFARLRHPLRSIEAEAEHLHEVERAGESAETPFVAILGIVLFLLPIVAVVLGLAFAAYYLAS*
Ga0081540_10100757	3300005983	Tabebuia Heterophylla Rhizosphere	MAAGSEAVRHARGRYSRFFARLRHPLRAVEAEAKHLHEVEREGESGETPFVVIFGLILFLLPIFLVMLGLAFAAYYLAA*
Ga0081539_104156032	3300005985	Tabebuia Heterophylla Rhizosphere	MAAGRDAARHAGSIYRRAFARVRHPVREIEADAEHLREIERKGESAEAPLVAILGIILFLLPIVALILGLSFAAYYLST*
Ga0075432_100087902	3300006058	Populus Rhizosphere	MAAARDAARHARALYRRAFAWLRRSVRGIEAEAEHLREIEREGESAETPVIAIVGLILFLLPIVLLILGLTFAAYYLAR*
Ga0075433_103703922	3300006852	Populus Rhizosphere	MAPVAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAIFGVVLFLLPIVALVLGVAFAAYYLAT*
Ga0075433_115709882	3300006852	Populus Rhizosphere	MAAGRDAARHAGTLYGKTLSRMRHPVRGIEAEAEHLRAVEREGESGETPFIAILGIIFFLLPIFAVVLGLAFAAYYLAS*
Ga0075425_1001318344	3300006854	Populus Rhizosphere	MAPVAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAIFGVVLFLLPIVALFLGVAFAAYYLAT*
Ga0075425_1013221691	3300006854	Populus Rhizosphere	VAAVRDAARHAGTLYRKALAWVLRPVRAVEAEAHHLHEVERAGESGETPLIAILGIVLFLLPIVLVVLGLTFAAYFLAR*
Ga0075434_1021133761	3300006871	Populus Rhizosphere	RPFTMAPVAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAIFGVVLFLLPIVALFLGVAFAAYYLAT*
Ga0075434_1023884182	3300006871	Populus Rhizosphere	MAAGRDAARHAGTLYGKTLSRMRHPVRGIEAEAEHLRAVEREGESGETPFIAMLGIIFFLLPIFAVVLGLAFAAYYLAS*
Ga0075429_1014376231	3300006880	Populus Rhizosphere	MAAARDAARHARALYRRAFAWLRRSVRGIEAEAEHLREIEREGESAETPVIAIVGLILFLLPIVLLILGLAFAAYYLAR*
Ga0075424_1000622618	3300006904	Populus Rhizosphere	MAAGRDAARHAGTLYGKTLSRMRHPVRGIEAEAEHLRAVEREGESGETPFIAILGIIFFLLPIFAVVLGLAFAAYYLAR*
Ga0066710_1020191512	3300009012	Grasslands Soil	MAAGRDAAAHAGTLYRKAFGFLRRPVRAIEAEAEHLLEIEREGEDETTPFIAIVGLIFFLTPIVLLILGLSLAAYYLAR
Ga0111539_101941624	3300009094	Populus Rhizosphere	MPAAKDAARHAGTLYRKGFSRVRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYY
Ga0114129_104875192	3300009147	Populus Rhizosphere	MPAAKDAARHAGTLYRKGFSRVRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0075423_112381992	3300009162	Populus Rhizosphere	VAAVRDAARHAGTLYRKALASVLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR*
Ga0075423_115751142	3300009162	Populus Rhizosphere	MAPVAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAILGVVLFLLPIVALVLGVAFAAYYLAT*
Ga0075423_119120072	3300009162	Populus Rhizosphere	MPAAKDAARHAGTLYRRTLARARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0126309_100193304	3300010039	Serpentine Soil	MAAGRDAARHAGTLYRKAFGSLRRRVREIEAEAEHLLEVEAEGESEATPLIAILGVVLFLTPIVLLILGLAFAAYYLAG*
Ga0126380_109463231	3300010043	Tropical Forest Soil	MAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAILGIVLFLTPIVAVVLGVAFAAYYLAT*
Ga0126376_113553662	3300010359	Tropical Forest Soil	MAAGREAVRHAGSLYGRTFKWLRHPVRGVEAEAEHLREVERVGESGETPFIAILGIVLFLIPIVAVVLGVAFAAYYLAT*
Ga0126377_100059977	3300010362	Tropical Forest Soil	MAASRGAVSHAGTIYRRTLTWLRHPFRGVKDEAEHLHDIERSGESAETPAIAIFGLILFLLPIVLLVLGLSFAAYYLAR*
Ga0126383_103225751	3300010398	Tropical Forest Soil	MAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAILGIVLFLIPIVALVLGVAFAAYYLAT*
Ga0124844_11992802	3300010868	Tropical Forest Soil	MAAGREAVRHAGSLYGRTFTWLRHPVRGVEVEAEHLREVERVGESGETPFIAILGIVLFLIPIVALVLGVAFAAYYLAT*
Ga0151490_18220603	3300011107	Soil	MGAGRNAVRHAGEIYRKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVFVILGLAFAAYFLAR*
Ga0120118_10167512	3300012010	Permafrost	MAAGRDAATHAGTLYRKAFGFVRRPVQEIEAEVEHLLEVEREGESETTPFIAIVGLIFFLTPIVLVILGLSFAAYYLAR*
Ga0157304_11131891	3300012882	Soil	RDAARHAGTLYRKALASLLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR*
Ga0157293_102862742	3300012898	Soil	MPAPKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0157308_100036344	3300012910	Soil	MPAPKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLASEPRSSVAAEAVRE
Ga0137359_115137892	3300012923	Vadose Zone Soil	MGAGRNAVRHAGSRYRKTFTWFRLPVRKIEAEAEHLREVERAGESGETPYIVMLGLVFFLTPLFLLLVGLAFAAYYIAR*
Ga0162651_1000114182	3300012938	Soil	MAAGRDGARHAGALYRKAFARLRHPFREIEAEVEHLREVEREGQSGETPFIAIAGIVLFLLPIVLLVLGLAFAAYYLTR*
Ga0162652_1000466701	3300012941	Soil	MAVGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG*
Ga0164300_102707081	3300012951	Soil	MGAGRNAVRHAGEIYGKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVLVILGLAFAAYFLAR*
Ga0164303_114735761	3300012957	Soil	MGAGRNAFRHAGEIYGKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVLVILGLAFAAYFLAR*
Ga0164299_102029061	3300012958	Soil	MGAGRNAVRHAGEIYGKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVFVILGLAFAAYFLAR*
Ga0164301_115374041	3300012960	Soil	VRHAGEIYGKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVFVILGLAFAAYFLAR*
Ga0164308_110790642	3300012985	Soil	MGAGRNAVRHAGEIYRKVFPRLRHPVREIEAEVEHLHELEHEGSSAATPLVAILGIILFLLPIVLVILGLAFAAYFLAR*
Ga0120147_10578852	3300013758	Permafrost	MAAGRDAATHAGTLYQKAFGFLRRPVQEIEAEVEHLLEVEREGESETTPFIAIVGLIFFLTPIVLVILGLSFAAYYLAR*
Ga0120111_10572202	3300013764	Permafrost	MAAGRDAATHAGTLYRKAFGFLRRPVQEIEAEVEHLLEVEREGESETTPFIAIVGLIFFVTPIVLVILGLSFAAYYLAR*
Ga0120171_10053155	3300014827	Permafrost	MAAGRDAATHAGTLYRKAFGFWRRPVQEIEAEVEHLLEVEREGESETTPFIAIVGLIFFLTPIVLVILGLSFAAYYLAR*
Ga0132258_124088951	3300015371	Arabidopsis Rhizosphere	MVAARDAARHARALYRRAFAWLRRSVRGIEAEAEHLREIERKGESAETPVIAIVGLILFLLPIVLLILGLAFAAYYLAR*
Ga0132257_1045673211	3300015373	Arabidopsis Rhizosphere	MAAARDAARHARALYRRAFAWLRRSVRGIEAEAEHLREIERKGESAETPVIAIVGLILFLLPIVLLILGLAFAAYYLAR*
Ga0132255_1000404542	3300015374	Arabidopsis Rhizosphere	MPATKDAARHAGTLYRKGFSRVRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS*
Ga0184605_101125252	3300018027	Groundwater Sediment	MAAGRDAARHAGTLYRKALPWLRHPVREVEAEAEHLLEIEREGKGAETPVIAILGVILFLLPIVLLILGLAFAAYFLAG
Ga0184605_102729152	3300018027	Groundwater Sediment	MTAGRHAARHAGTLYRKTFGWLRHPVREIEAEAEHLLEIERKGEREETPLIAILGVILFLLPIVVLILGLAFAAYFLSG
Ga0184619_102970141	3300018061	Groundwater Sediment	MAAGRDAARHAGTLYRKALPWLRHPVREVEAEAEHLLEIEREGKGAETPIIAILGVILFLLPIVLLILGLAFAAYFLAG
Ga0184619_103751612	3300018061	Groundwater Sediment	MAAGRDAATHAGTLYRKAFGFLRRPLREIEAEAEHLLEVEREGEDETTPFIAIVGLIFFLTPIVLLILGLSLAAYYLSR
Ga0184619_103799782	3300018061	Groundwater Sediment	MAASKDAARHAGTLYRRLFGSLRRPVRAIEAEAEHLLEVEREGESAATPFIAILGIILFLTPIVVAILGLAFAAYYLAR
Ga0184618_100135211	3300018071	Groundwater Sediment	LYRKAFGFLRRPLREIEAEAEHLLEVEREGEDETTPFIAIVGLIFFLTPIVLLILGLSLAAYYLAR
Ga0184635_101854252	3300018072	Groundwater Sediment	ARHAGTLYRRTLAKARRPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0190269_107170172	3300018465	Soil	YRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0173481_100408561	3300019356	Soil	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0173482_104046701	3300019361	Soil	RDAARHAGTLYRKALASLLRPVRAVEAEAHHLHEVEREGESGETPLIAILGVVIFLLPIVLIVLGLTFAAYYLAR
Ga0193701_10335542	3300019875	Soil	MGVGRDAVRHAGEIYRRVIPRLRHPVHEIAAEVEHLHELEHEGASEATPLVAIFGIVLFLLPIVFGILGLAFAAYYLAQ
Ga0210382_100829103	3300021080	Groundwater Sediment	MAAGRDAATHAGTLYRKAFGFLRRPLREIEAEAEHLLEVEREGEDETTPFIAIVGLIFFLTPIVLLILGLSLAAYYLAR
Ga0193719_102874271	3300021344	Soil	YRRSFGSLRRPVRAIEAEAKHLHEVEREGESAATPLIAILGIILFLTPIVLVILGLAFAAYYLAR
Ga0182009_103226892	3300021445	Soil	VGVGRDAVRHAGGIYRKVLPWGARHPVQELEHLQEVEHEGTSAATPLVAILGIILFLLPIVALILGLAFAAYYLAG
Ga0247790_100157071	3300022915	Soil	PVYDDAMPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0207688_110368371	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	IYRKVLPWGARHPVQELEHLQEVEHEGTSAATPLVAILGIILFLLPIVALILGLAFAAYYLAG
Ga0207684_102331593	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAAGSDAARHAGRLYRKAFTRLRHPVREVETEVEHLREVEREGESGETPFIAIFGVVLFLLPIVALLLGLSFAAYYLTR
Ga0207687_101699292	3300025927	Miscanthus Rhizosphere	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGEGAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0207706_115081582	3300025933	Corn Rhizosphere	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYL
Ga0209814_101300162	3300027873	Populus Rhizosphere	MPAAKDAARHAGTLYRKGFSRVRHPVRAVEAEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0307291_11065102	3300028707	Soil	MGAGRDAVRHAGGIYRKVLPRLRHPVREIEAEVEHLRELEHEGASEATPLVAILGIVLFLLPVVFIILGLAFAAYYLAS
Ga0307303_100182232	3300028713	Soil	MGVGRDAVRHASEIYRRVIPRLRHPVHEIAAEVEHLHELEHEGASEATPLVAILGIILFLLPIVLVILGLAFAAYYLAQ
Ga0307307_101777612	3300028718	Soil	MGVGRDAVRHAGEIYRRVIPRLRHPVHEIAAEVEHLHELEHEGAGEATPLVAIFGIVLFLLPIVFGILGLAFAAYYLAQ
Ga0307319_102994942	3300028722	Soil	VGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0307318_100641742	3300028744	Soil	TPPREGARDPVYDGSMAVGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0307320_100278482	3300028771	Soil	MAVGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0307320_104759451	3300028771	Soil	MAAGGNAARHAGTLYRKAFGSLRRPIREIETKSEHLVEIEREGESEATPLIAILRIIFFLIPIV
Ga0307290_101459322	3300028791	Soil	PPREGARDPVYDGSMAVGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0307287_103132292	3300028796	Soil	DGAMAAGRDAATHAGSLYRKALGFLRRPVQGIEAEAEHLLEVEREGESETTPFIAILGIILFLAPIFLLILGVSLAAYYLAK
Ga0307292_105093432	3300028811	Soil	MAVGRDAARHAGTRYRKAFNRFRHPVREIESEVEHLREVEQEGESGETPFIAILGIILFLLPIVVVVLGLAFAAYYLTT
Ga0307310_103755311	3300028824	Soil	MGVGRDAVRHAGEIYRRVIPRLRHPVHEIAAEVEHLHELEHEGASEATPLVAILGIILFLLPIVLVILGLAFAAYYLAQ
Ga0307310_104947821	3300028824	Soil	YDGAMAAGRDAARHAGTLYRKALPWLRHPVREVEAEAEHLLEIEREGKGAETPIIAILGVILFLLPIVLLILGLAFAAYFLAG
Ga0307289_100277883	3300028875	Soil	MGAGRDAVRHAGGIYRKVLPRLRHPVREIEAEVEHLRELEHEGASEATPLVAILGIVLFLLPVVFLILGLAFAAYYLAS
Ga0307278_100224364	3300028878	Soil	MAVGRDAARHAGTRYRKAFNRFRHPVREIEGEVEHLREVEQEGESGETPFIAILGIVLFLLPIVAAVLGLAFAAYYLTT
Ga0307278_100224822	3300028878	Soil	MAASKDAARHAGTLYRRSFGSLRRPVRAIEAEAKHLLEVEREGESAATPLIAILGIILFLTPIVLAILGLAFAAYYLAR
Ga0307277_104859772	3300028881	Soil	GALDPVYDGSMAVGRDAARHAGALYRKTLPWLRHPVRGVEAEAEHLLEIEREGKSAETPVIAILGIILFLLPIVALILGLAFAAYYLAG
Ga0307501_101714271	3300031152	Soil	MAASKDAARHAGTLYRRLFGSLRRPVRAIEAEAEHLLEVEREGESAATPFIAILGIILFLTPIVLAILGLAFAAYYLAR
Ga0310887_109094482	3300031547	Soil	AARHASTLYRRTLARARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0310904_112817252	3300031854	Soil	AARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0310900_113126812	3300031908	Soil	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGEGAETPFVAILGIVLFLLPIVAIVLGLA
Ga0308176_109757172	3300031996	Soil	VGVARDAARHAGGIYRKVLPWGVRHPVREIEAEVEHLQELEHEGTSAATPLVAILGVVLFLLPIVLLILALTFGAFYLAS
Ga0308176_111530711	3300031996	Soil	MGLLIARSPRYDEAMTAGRDGARHAGALFRKAFTRLRHPFREIEAEVEHLREVEREGESGETPFIAIAGIVLFLLPIVLLVLGLAFGAYYLTR
Ga0307471_1025190002	3300032180	Hardwood Forest Soil	MAAGRGAVHHARARYGRTFARLRHPVKRVEAEAEHLVEVEREGEAGETPFIAILGIILFLLPIVAVVLGLAFAAYYLAG
Ga0307472_1008039241	3300032205	Hardwood Forest Soil	MALVAAGREAVRHAGSLYGRTFTWLRHPVRGVEAEAEHLREVERVGESGETPFIAIFGVVLFLLPIVALVLGVAFAAYYLAT
Ga0335079_116047962	3300032783	Soil	QGCRGGHGRVVGAGSDAAKQAGSRYRRAWARIVRPVRKLESEVHHLHEVEQEGESGEAPFIAILGIVLFLIPIFLLMLGLALAAYYLAR
Ga0335080_100723074	3300032828	Soil	VGAGSDAAKQAGSRYRRAWARIVRPVRKLESEVHHLHEVEQEGESGEAPFIAILGIVLFLIPIFLLMLGLALAAYYLAR
Ga0310810_112351821	3300033412	Soil	MPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLALAFAAYYLA
Ga0247830_111496691	3300033551	Soil	VYDDAMPAAKDAARHAGTLYRRTLAKARHPVRAVESEVEHLREIEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS
Ga0373958_0107558_66_305	3300034819	Rhizosphere Soil	MPAAKDAARHAGTLYRRTLARARHPVRAVESEVEHLREVEREGESAETPFVAILGIVLFLLPIVAIVLGLAFAAYYLAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences