Metagenome Family F061607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061607
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	69 residues
Representative Sequence	MEPNGGALLSAVQLGQTVKSPIYDGRQKFGAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDYRTTDFAI
Number of Associated Samples	110
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.23 %
% of genes near scaffold ends (potentially truncated)	96.95 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.214 % of family members)
Environment Ontology (ENVO)	Unclassified (20.611 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.145 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.00% β-sheet: 0.00% Coil/Unstructured: 61.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13419	HAD_2	58.02
PF00389	2-Hacid_dh	4.58
PF07568	HisKA_2	1.53
PF02826	2-Hacid_dh_C	1.53
PF05988	DUF899	0.76
PF01467	CTP_transf_like	0.76
PF12680	SnoaL_2	0.76
PF12840	HTH_20	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.53
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	82.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.44 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	71.76 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	9.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.76 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	9.92 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.76 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	9.92 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.76 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	9.92 %
Desulfuromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.76 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7.63 %
unclassified Desulfuromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.76 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7.63 %
Desulfuromonas sp. TF	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp. TF	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17026790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1856	Open in IMG/M
2170459005\|F1BAP7Q01AUVSI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
2170459005\|F1BAP7Q01DAY6K	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
2170459005\|F1BAP7Q02H37HG	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
2170459005\|F1BAP7Q02JNL8E	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
2170459014\|G1P06HT01DMJL8	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
2170459023\|GZGNO2B01DO17R	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300000550\|F24TB_10100682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300000955\|JGI1027J12803_108162814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300001990\|JGI24737J22298_10229291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300002126\|JGI24035J26624_1027136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300002899\|JGIcombinedJ43975_10104769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005165\|Ga0066869_10069049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300005187\|Ga0066675_10110543	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300005289\|Ga0065704_10050890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300005289\|Ga0065704_10303765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300005293\|Ga0065715_11035235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005293\|Ga0065715_11081112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp. TF	513	Open in IMG/M
3300005294\|Ga0065705_10872965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300005294\|Ga0065705_10967311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300005295\|Ga0065707_10693008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300005332\|Ga0066388_102377465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300005334\|Ga0068869_100777605	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005339\|Ga0070660_101656274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005451\|Ga0066681_10120058	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300005454\|Ga0066687_10906772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300005458\|Ga0070681_10843912	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005518\|Ga0070699_102115810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300005536\|Ga0070697_101731658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300005540\|Ga0066697_10108708	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300005544\|Ga0070686_101582956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300005552\|Ga0066701_10824867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300005555\|Ga0066692_10013730	All Organisms → cellular organisms → Bacteria	3927	Open in IMG/M
3300005556\|Ga0066707_10770872	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005598\|Ga0066706_10227097	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300005764\|Ga0066903_102560476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300005764\|Ga0066903_106280366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300005764\|Ga0066903_107229097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300005764\|Ga0066903_108169206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300005843\|Ga0068860_101039377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300006032\|Ga0066696_10824196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300006046\|Ga0066652_101860634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300006854\|Ga0075425_102210511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300007788\|Ga0099795_10176508	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300009038\|Ga0099829_10596722	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300009148\|Ga0105243_12340827	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010041\|Ga0126312_10355348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300010043\|Ga0126380_11302593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300010047\|Ga0126382_10644381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300010048\|Ga0126373_12614333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300010326\|Ga0134065_10254198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300010335\|Ga0134063_10107415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1270	Open in IMG/M
3300010358\|Ga0126370_11424296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300010361\|Ga0126378_11144645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300010362\|Ga0126377_10113179	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300010366\|Ga0126379_11577569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300010375\|Ga0105239_10128446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2818	Open in IMG/M
3300010376\|Ga0126381_100033344	All Organisms → cellular organisms → Bacteria	6168	Open in IMG/M
3300010398\|Ga0126383_13044651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012096\|Ga0137389_10698947	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300012189\|Ga0137388_11771821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300012198\|Ga0137364_10116382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1900	Open in IMG/M
3300012198\|Ga0137364_10921138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300012509\|Ga0157334_1067773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300012582\|Ga0137358_10186376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1416	Open in IMG/M
3300012918\|Ga0137396_10007755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	6426	Open in IMG/M
3300012941\|Ga0162652_100019321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300012948\|Ga0126375_10007648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4324	Open in IMG/M
3300012948\|Ga0126375_11595899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300012955\|Ga0164298_10241098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1084	Open in IMG/M
3300012961\|Ga0164302_10545259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300012961\|Ga0164302_11754551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300012971\|Ga0126369_12220023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300012984\|Ga0164309_11462316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300012987\|Ga0164307_10118238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1694	Open in IMG/M
3300012987\|Ga0164307_10472241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	941	Open in IMG/M
3300013297\|Ga0157378_10901019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300014166\|Ga0134079_10488645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300014325\|Ga0163163_10493040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1287	Open in IMG/M
3300014745\|Ga0157377_11410012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300015054\|Ga0137420_1165196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3998	Open in IMG/M
3300015054\|Ga0137420_1165200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1023	Open in IMG/M
3300015357\|Ga0134072_10132567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300015372\|Ga0132256_100390187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1493	Open in IMG/M
3300015372\|Ga0132256_103615276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300015372\|Ga0132256_103627742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300015373\|Ga0132257_100698114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1260	Open in IMG/M
3300015373\|Ga0132257_104176976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300015374\|Ga0132255_100341965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2164	Open in IMG/M
3300015374\|Ga0132255_100613208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1610	Open in IMG/M
3300016319\|Ga0182033_11714959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300016387\|Ga0182040_11305795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300016404\|Ga0182037_11462042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300018000\|Ga0184604_10099181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300018027\|Ga0184605_10193215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300018028\|Ga0184608_10242809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300018052\|Ga0184638_1217149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300018066\|Ga0184617_1147243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300018074\|Ga0184640_10383926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300018084\|Ga0184629_10368839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300018431\|Ga0066655_10381065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300019866\|Ga0193756_1012725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1126	Open in IMG/M
3300020022\|Ga0193733_1093573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300021411\|Ga0193709_1008597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2554	Open in IMG/M
3300021560\|Ga0126371_10291540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1756	Open in IMG/M
3300022756\|Ga0222622_11118861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300024181\|Ga0247693_1017794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300024279\|Ga0247692_1081452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300024331\|Ga0247668_1106493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300025930\|Ga0207701_10122211	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300026315\|Ga0209686_1139022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300026325\|Ga0209152_10232714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300026330\|Ga0209473_1068354	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300026342\|Ga0209057_1080925	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300026527\|Ga0209059_1156546	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300028381\|Ga0268264_12359340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300028811\|Ga0307292_10211897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300028819\|Ga0307296_10480579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300031231\|Ga0170824_118873208	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031446\|Ga0170820_12214345	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031446\|Ga0170820_16464453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300031469\|Ga0170819_16406476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	981	Open in IMG/M
3300031469\|Ga0170819_16488025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300031474\|Ga0170818_108519104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300031720\|Ga0307469_11122198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300031890\|Ga0306925_10577125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1190	Open in IMG/M
3300031947\|Ga0310909_10441083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1093	Open in IMG/M
3300031954\|Ga0306926_12739993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300032076\|Ga0306924_12615192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300032179\|Ga0310889_10438622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.92%
Host-Associated	Host-Associated	18.32%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.81%
Plants	Host-Associated → Plants	18.32%
Aquatic	Environmental → Aquatic	6.11%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.87%
Sediment	Environmental → Aquatic → Sediment	6.11%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Roots	Host-Associated → Plants → Roots	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.65%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.05%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03919150	2088090014	Soil	MESNGGALLSAVQLEQTVKLPIQHGRQKLGAAGNLVRVSVNVFCSPTAAVIESALLMLLIGWIDYVTDFNVTVFYFVPVVLATW
E41_11171850	2170459005	Grass Soil	MSAVQLEQPVNSPIYDPRQQFTATDKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYKT
E41_01307960	2170459005	Grass Soil	MEPNGGALLSAVQLEQPAESLIYDGRRKFSAADKTLRVSVNVLRSPTAAVIESALLMLLIGWIDYRTTDFAITVS
E41_06132110	2170459005	Grass Soil	MERNGGALMSAVQLEQPVNSPIYDARQGFTAADKPFRISLNFLRSPTAAVVESALLMLLIGWIDYKT
E41_02106710	2170459005	Grass Soil	MEPNGGALLSAVQLEQPVKSPIYDGRQEFGAADKPLRVSVNFLRSPTAAVIESALLMLLIGWI
2PV_00108680	2170459014	Switchgrass, Maize And Mischanthus Litter	MERNRGALLCEVQLEQPVNPSISELRQESEKPVHVSVDFLRSPTAAVAESALLILLIGWI
FA3_11089150	2170459023	Grass Soil	MSAVQLEQPVNSPIYDARQGFTAADKPFRISINFLRSPTAAVIESALLMLLIGWIDYKTTDFAVYGFLV
F24TB_101006821	3300000550	Soil	MERNGGALLSAVQVERPVNSPIYDARQKFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGWID
JGI1027J12803_1081628142	3300000955	Soil	SRSSTVLDSVLMERNGGALLSSVRVEQPVNSSIYDARKQFSAANKPLRVSFNFFRSPTAAVIESALLILLIGW
JGI24737J22298_102292911	3300001990	Corn Rhizosphere	MEPNGGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLWSPTAAVIESALLMLLIGWIDYKTTDFAITLFYF
JGI24035J26624_10271362	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MEPNGGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLWSPTAAVIESALLMLLIGWID
JGIcombinedJ43975_101047691	3300002899	Soil	MEPNGGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLCSPTVAVIESALLMLLIG*
Ga0066869_100690492	3300005165	Soil	LSAFQLEQTVKSPIYDGRRKFSPADKPLRVTALRSPTAAVIESALLMLLIGWID
Ga0066675_101105433	3300005187	Soil	LEQPFKSPIYDGRQQFTAAGKPLRVSIDSLRSPTAGVIESALLMLLIGWIDYK
Ga0065704_100508902	3300005289	Switchgrass Rhizosphere	MERNGGALVSAVHVEQPVNSSIYDARQQFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYKTTDFSIMVFY
Ga0065704_103037651	3300005289	Switchgrass Rhizosphere	MEPNRGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLCSPTAAVIESALLML
Ga0065704_104766282	3300005289	Switchgrass Rhizosphere	MEPNEGALLSAVQLEQTVKLPIYDGRQNFSAADKPLRVSVNVLRSSTAAVIESA
Ga0065715_110352352	3300005293	Miscanthus Rhizosphere	MSAVQLEQPVNSPIYDARQQFTAADKPLRVSVNFLRSPTAAVFESALLMLLIGWIDYKTTDFAITLFYFAP
Ga0065715_110811121	3300005293	Miscanthus Rhizosphere	MEPSGGALLSAVQLEQIVKSPIYDQHQKFNAADKQLRASVNVLRSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPVVLASWRAGRKA
Ga0065705_108729651	3300005294	Switchgrass Rhizosphere	VLMEPNEGALLSAVQLEQTVKLPIYDGRQNFSAADKPLRVSVNVLRSSTAAVIESALLMLLIGWIDYKTTDFAITLFYFAP
Ga0065705_109673111	3300005294	Switchgrass Rhizosphere	VLLEPNGGALLSAVQLEQTIKSPLDEGRQEFNAADTQLCVSVNVLRSPTTAVIESAL
Ga0065707_106930081	3300005295	Switchgrass Rhizosphere	MSAVQLEQPVNSPIYDARQELVAADKPLRVSVNFLYSPTAAVIASALLMLLIGWIDY
Ga0066388_1023774651	3300005332	Tropical Forest Soil	MRLEQPVNSPVSDVRQESPAAEKPLPVSFDFLCSHKVAVIGSALLMLLIGWIDYVTDFNVTVFYFVPV
Ga0068869_1007776051	3300005334	Miscanthus Rhizosphere	LSTVLDFVLTERNGEAGGALLSAVRVAQPFNSPIYDARKHFSAPLRVSFNFLRSPTAAVIESALLMLLIGWIDYKTT
Ga0070660_1016562741	3300005339	Corn Rhizosphere	LSAFQLEQTVKSPISDGRRKFSAAEKQFRVTGLHSPTAAVIESALLMLLIGWIDYKTTDF
Ga0066681_101200581	3300005451	Soil	MEPNGRALLSAIQLEQPFKSPIYNGRQQFTAAGKPLRVSIDFVRSPTAAVIESALLMLLIGWI
Ga0066687_109067722	3300005454	Soil	LSTVFRFVLMEPNRVALLSAIQLEQPVNLPTYDGRQEFTAADKSRRVSVNFLRSPTAAVIASALLMLLIGWIDYITDFNVTVFYFAPV
Ga0070681_108439121	3300005458	Corn Rhizosphere	LSAFQLEQTVKSPIYDGHRKFSAADKPLRVTALRSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPVVLASWRAGRKA
Ga0070699_1021158101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSSVQLEQPVNSPIYDARQPFTATDKRLRVGINFLRSPTAAVIESALLMLLIGWIDY
Ga0070697_1017316581	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEPNGGALLSAVQLERPVKSPIHCGRQKFGAAGKPFRVNANVLFSPTAAVIESALLMLLIGWVDYVTDFNVTVF
Ga0066697_101087081	3300005540	Soil	MERNGGALVSAVQVEGPVNSPIYDARQRFTAADKPLRVGVNFLCSPTAAVIESALLMLLIGWID
Ga0070686_1015829562	3300005544	Switchgrass Rhizosphere	MEPNGGALLSAVQLEQPVKSPIHGGRQKFGAAGNPFRVSANVLFSPTAAVIESALLMLLIGWVDYVTD
Ga0066701_108248672	3300005552	Soil	MEPNRVALLSAIQLEQPVNLPTYDGRQEFTAADKSRRVSVNFLRSPTAAVIASALLMLLIGWIDYITDFNVTVFYF
Ga0066692_100137306	3300005555	Soil	MEPGGMMSSAQLGQPVTLPIYNTRQHVTAADKPRRVSFDFLHGPTAAVIGSALLMLLIGWIDYKSTDFAITVFY
Ga0066707_107708721	3300005556	Soil	VSAVHVEQPVNSSIYDARQQFTAADKPLRVTVNFLRSPTAAVIESALLMLLIGWID
Ga0066706_102270971	3300005598	Soil	MEPNRVALLSAIQLEQPVNLPTYDGRQEITAADKSRRVSVNFLRSPTAAVIASALLMLLIGWIDYITDFNVTVFYF
Ga0066903_1025604762	3300005764	Tropical Forest Soil	VLVEPNGGALLSAVQLEQTVKSPICNRRQKFSAAGKLIRVCINVLCSPTAAVIESALLMLLIGWIDYITDFNVT
Ga0066903_1062803662	3300005764	Tropical Forest Soil	MEPNGGALLSAVQLGQTVKSPIYNGRKKLSAAGKLIRVSINVLCSPTAAVIESAL
Ga0066903_1072290971	3300005764	Tropical Forest Soil	MERNRGALFSAVQREQPFNSSIPEVRQEFTGTEKPLRVSVNFLCSPTVAVIESALLMLLIGWIDYVTDFNVTVFYFVPVVWATWR
Ga0066903_1081692062	3300005764	Tropical Forest Soil	MERNGGALLSAVQRKQPVNSRIPHVPSEANGTENPLRASINFLRSPTAAVVESALLILLIGWIDYITDFNVTVFYFVP
Ga0068860_1010393772	3300005843	Switchgrass Rhizosphere	VLLEPNGGALLSAFQLEQTVKSPIYDERQSFSAADKPLRVTALRSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPVVLASWR
Ga0066696_108241962	3300006032	Soil	VSAVQVEGPVNSPIYDARQRFTAADKPLRVGVNFLRSPIAAVIESALLMLLIGWIDYKTTDF
Ga0066652_1018606341	3300006046	Soil	VSAVHVEQPVNSSIYDARQQFTAADKPLRVTVNFLRSPTAAVIESALLMLLIGWIDYKTTDF
Ga0075425_1022105112	3300006854	Populus Rhizosphere	VSAVQLEQPVTSPTYDARQEFTAADKPLSLGVNFLRSPTAAVIGSALLMLLIGWIDYV
Ga0099795_101765081	3300007788	Vadose Zone Soil	MEPGGMMSAAQLGQPVTLPIYNTRQHVTAADKPCRVSFDFLHGPTAAVIGSALLMLLIGWIDYKSTDFAIT
Ga0099829_105967221	3300009038	Vadose Zone Soil	MERNGGALASAVRLEQALNSSIYDARQDFTAADKPLRVGVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITV
Ga0105243_123408271	3300009148	Miscanthus Rhizosphere	VLLEPNGGALLSAFQLEQTVKSRIYDGHRKFSAADKPIRVTALRSPTAAVIESALLMLLIGWIDYK
Ga0126312_103553482	3300010041	Serpentine Soil	MKCNAEALVSALHVKQALNSPAHGVRQPFSSLDKTLRVGVIFLRSPAAAVIESALLMLLIGWIDYKTTDFAITVFYFGRWFWPHGRQDG
Ga0126380_113025931	3300010043	Tropical Forest Soil	MEPNGGALLSAVQLEQTVKSPIYEGHQKFSAAGKLLRISVNVLWSPTAAVIESALLILLIGWIDYITDFNVTVFYFVPVVLSTW
Ga0126382_106443811	3300010047	Tropical Forest Soil	MEPNGGALLSAIQLEQPVKSPIYHGRQKFSAAGKLFRVSVNVLCSPTAAVIESALLMVLIGWIDYKTTDFAITLFYFAPVVLA
Ga0126373_126143331	3300010048	Tropical Forest Soil	MERNGGALLSVVQLEEPVNSSIPGIRREGTRREKPLRVGANFLCSPTAAVVESALLMLLIGWIDYVTDFNVTVFYFVPV
Ga0134065_102541982	3300010326	Grasslands Soil	LMEPGGIVSAAQLEQPVNPLIYNARQHVTAAEKPRRVSFDFLHGPTAAVIGSALLMLLIGWIDYKSTDFAITVFYFGPAYWQHGGQDAKPAGL*
Ga0134063_101074151	3300010335	Grasslands Soil	VEQPVNSPIYDVRQRFTPADKSLRVGVNFLRSPTAAVIESALLMLLI
Ga0126370_114242963	3300010358	Tropical Forest Soil	VRAAALELQRQVGSSIYDARQQATGADKTFGVSFDVLYSPTAAVIESALLMLLIGWIDYKTTDFAMTVFYFV
Ga0126378_111446451	3300010361	Tropical Forest Soil	MERNRGALLSAVQLDQPFNSSIPEVRQEFTGTEKPLRVSVNSLCSPIAAVIESALLMLLIGWIDYVTDF
Ga0126377_101131791	3300010362	Tropical Forest Soil	MEPNGGALLSAVQLEQTVKSPIYDERQELGAAGKLLRVSVDVLCSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPV
Ga0126379_115775691	3300010366	Tropical Forest Soil	MESNGGALLSAVRLQEPANSSIPVVRRQVTGAKKPLRVIVNFLSSPKAAVIESALLMLLIGWIDYITDFNVTVFYFVPVVLATWRAG
Ga0105239_101284464	3300010375	Corn Rhizosphere	MEPNGGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLCSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPVVLASWRAGRKA
Ga0126381_10003334410	3300010376	Tropical Forest Soil	MSAAQLEQAINSTIYDARRRFVSTDNPHRVRVDFLRSPTAAVIASALLMLLIGWVD
Ga0126383_130446511	3300010398	Tropical Forest Soil	MERNRGALLSAVQPEQPFNSSISEVRQEFTRTEKPLRVSVNFLFSPTAAVIESALLMLLI
Ga0137389_106989472	3300012096	Vadose Zone Soil	MERGGMMSAVQLEQLVTSPIYSARQHFTAQDKPRRGSVDFLRSPTAAVIASALLMLLIGWVDYKTTDFAITGFYFM
Ga0137388_117718211	3300012189	Vadose Zone Soil	VEQPVHSPIYDARQRFTAADKSLRVGDNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFY
Ga0137364_101163821	3300012198	Vadose Zone Soil	LEQPFKSPIYDGRQQFPAAGKPLRVSIDFLRSPTAAVIESALLMLLIGWIDYKTTDFA
Ga0137364_109211382	3300012198	Vadose Zone Soil	MSAVQLEQPVNSPIYDARQRFTAADKPLRVTVNFLRSPTAAVIESALLMLLIGWIDY
Ga0157334_10677731	3300012509	Soil	VLLEPNGGALLSAFQLEQTVKSPISDGRQNFSAADKPLPVTALRSPTAAVIESALLMLLIGWIDYKTTDFAIT
Ga0137358_101863763	3300012582	Vadose Zone Soil	MSAVQLEQPVNSPIYDARQRFPAADKPLHVGVNFLRSPTAAVIESALLMLLIGWIDYK
Ga0137396_100077551	3300012918	Vadose Zone Soil	MEPNGGALLSAVQLGQTVKSPIYDGRQKFGAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDYRTTDFAI
Ga0162652_1000193212	3300012941	Soil	VSAVQLEQPVNSPIYDARQQFTAADKPLRVGVNFLSSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFGPVVLAT*
Ga0126375_100076481	3300012948	Tropical Forest Soil	VLIEPNRATLVSAVQLEQPVNSPIYDARQHFIAVDKPLRDNFDLLRSSTAAVIGSALLMMLIGWVDYTTDFNVTVFYF
Ga0126375_115958991	3300012948	Tropical Forest Soil	MEPNWGALSSAVQLEQTVKPSIYDGRQKFGAPGKLFRVSINVLCSPTAAVIESAFLMLLIGWIDYITDFNVT
Ga0164298_102410982	3300012955	Soil	MERNRGALLSAVQLEQPVNSSIPDVHQEFTGTEKPPCVIVNFLRSPTAAVIESALLMLLIGWIDYITDFN
Ga0164302_105452592	3300012961	Soil	MEPNGGALLSAVQLGQTAKSPIYDGRQKFAAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDY
Ga0164302_117545512	3300012961	Soil	LYTVLDLVLMEPNGGALLSAIQLEQTVKSPIYDGRQKFNAADKPLRVSVNVLCSPTAAVIES
Ga0126369_122200231	3300012971	Tropical Forest Soil	MIHIFKRVWIVHGLRFVLMERNGGALLSVVQLEEPVNSSIPGIRREGTRREKPLRVGANFLCSPTAAVVESALLMLLIGWIDYVTDFNV
Ga0164309_114623161	3300012984	Soil	VERPIDDAPQRFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAIT
Ga0164307_101182383	3300012987	Soil	LEQTVKSPIYDGRQKFAAADKPRRVSVNVLRSPTAAVIESALLMLLIGWI
Ga0164307_104722412	3300012987	Soil	LEQAVKSPIYDGRRKFNAADKPLRVSVLRSPTAAVVASALLMLLIGWIDY
Ga0157378_109010191	3300013297	Miscanthus Rhizosphere	MEPNGGALLSAVQLEQPVKSPIHGGRQKFGAAGKPFRVNANVLFSPTAAVIESAL
Ga0134079_104886451	3300014166	Grasslands Soil	VEQLVSSPIYDARRRFTAAHKPLRVGVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFGPV
Ga0163163_104930401	3300014325	Switchgrass Rhizosphere	MERNGGALLSAVQLEPTVKSPVYAGRQKFGSAIRPLRVIVNCLSSPTAAVIESALLMLLIGWIDYVTDFNVTVFYFVP
Ga0157377_114100121	3300014745	Miscanthus Rhizosphere	VLTERNGEAGGALLSAVRVAQPFNSPIYDARKHFSAPLRVSFNFLRSPTAAVIESALLMLLIGWIDYKTTDFAVTVFYFGP
Ga0137420_11651961	3300015054	Vadose Zone Soil	MEPNGGALLSAVQLGQTVKSPIYDGRQKFGAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDYRTTDFAITVFYFGPVPWCW
Ga0137420_11652002	3300015054	Vadose Zone Soil	MEPNGGALLSAVQLGQTVKSPIYDGRQKFGAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDYRTTDFAITVFYFGPVVL
Ga0134072_101325672	3300015357	Grasslands Soil	VEQLVNSPIYDARRRFTAAHKPLRVGVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFGPVVLA
Ga0132256_1003901871	3300015372	Arabidopsis Rhizosphere	MSAVQLEQPVNSPIYDARQQFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYK
Ga0132256_1036152762	3300015372	Arabidopsis Rhizosphere	MEPNGGALLSAVQLEQPVNSSIYDAHQRFTAGRKPLRVSVNFLRSSTAAVIESALLMLLIGWIDY
Ga0132256_1036277421	3300015372	Arabidopsis Rhizosphere	MEPNGGALLSAIQLEQTVKSPIYYQRQKFSAAGKLLRVSVNVVCSPTAAVIESALLILLIGWIDYVTDFNVTVFYFVPVVLAT
Ga0132257_1006981141	3300015373	Arabidopsis Rhizosphere	VLLEPNGGALLSAFQLEPTVKSPIYDGRQNFSAADKRLRLTALRSPTAAVIESALLMLLIGWIDYKTTDFAIT
Ga0132257_1041769761	3300015373	Arabidopsis Rhizosphere	MEPNGGALLSAVQLEQPVNSSIYDAHQRFTAGRKPLRVSVNFLRSSTAAVIESALLMLLIGWIDYKTTDFAITLFY
Ga0132255_1003419651	3300015374	Arabidopsis Rhizosphere	MEPNGGALLSAVQLEQTIKSPIYDERQELGAADKLLRVSVDVLCSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPV
Ga0132255_1006132081	3300015374	Arabidopsis Rhizosphere	MERNGGALVSAVQVEQPVNSSIYDARQQVTAADEPHRITVDYLRSPTAAVIGSALLMLLIGWIDYKTTDFAITLFYFAP
Ga0182033_117149592	3300016319	Soil	LSAVQPEQPVNSSVPDVHQEFTGTEKPLCVIVNFLRSPTAAVIESTLLMLLIGWIDYITDFNVTVFYFVPV
Ga0182040_113057952	3300016387	Soil	MEPNGGALLSAIQLEQTVKPPTYERRQKSSAAGKLLRVSVNILCSPTAAVIESALLMLLIGWIDYVTDFNVTVFYFVPVVLATWRA
Ga0182037_114620422	3300016404	Soil	MERIGGALLPAVQPEQPFNSRISDARQQFTAAEKPLRVGVNFLCSPTAAVVASALLMLLIGWIDYI
Ga0184604_100991811	3300018000	Groundwater Sediment	KSQIYDGRGKFSVADKPLRVPVLRSPTAAVIESALLMLLIGLD
Ga0184605_101932151	3300018027	Groundwater Sediment	MSAVQLEQPVNSPIYDARQRFPAADKPLHVGVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFGPVVLA
Ga0184608_102428091	3300018028	Groundwater Sediment	VSAVQLEQPVNSRIYDAGQELVAADKPLRVSVNFLHSPTAAVVESALLMLLIGWIDYKTT
Ga0184638_12171491	3300018052	Groundwater Sediment	MSAVQLEQAVNSPIYNARQRFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITV
Ga0184617_11472432	3300018066	Groundwater Sediment	MSAVQLEQPVNSPIYDARQRFPAADKPLHVGVNFLRSPTAAVIESALLMLLIGWIDYRTTDFAITLFYF
Ga0184640_103839261	3300018074	Groundwater Sediment	MERNGGALVSAVEVEQPVNSPIYEARQEFTAADKPLRVGVNFLSSPPAAVIESALLMLLIGWIDYKTTDFAITVFYFGPVVLATW
Ga0184629_103688392	3300018084	Groundwater Sediment	MSAVQLEQPVNSPIYDARQRFTAADKPLRVGVNFLSSPTAAVIESALLMLLIGWIDYKTTDF
Ga0066655_103810651	3300018431	Grasslands Soil	VPIYGQRQKINAAHKQLRVSVNVLRSPTAAVIESALLMLLIGWIDYKTTDFA
Ga0193756_10127253	3300019866	Soil	MSAVQLEQPVNSRIYDARQQFTAADKPLRVSVNFLRSPTAAVIESALLMLLIGW
Ga0193733_10935732	3300020022	Soil	MSAVQLEQPVNSPIYDARQELVAADKPLRVSVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFGPVVL
Ga0193709_10085971	3300021411	Soil	VLLEPNGGALLSAFQLEQTVKSPIYDGRRKFSAADKPLRVTVLRSPTAAVIESALLMLLIGWID
Ga0126371_102915401	3300021560	Tropical Forest Soil	MERNGGALLSGVQLEQPVNSPIARARQELIEPGRPVRIDVNFLCSPTVAVVESALLMLLIGWIDYITDFNVTVFYFM
Ga0222622_111188612	3300022756	Groundwater Sediment	GLTLVLLEPNGGALLSAFQLEQTVKSPIYDGRGKFSAADKPLRVPVLRSPTAAVIESALLMLLIGLD
Ga0247693_10177942	3300024181	Soil	MEPNGGALLSAVQLEQPVKSPIHGGRQKFGAAGKPFRVNANVLFSPTAAVIESALLMLLIGWVDYV
Ga0247692_10814522	3300024279	Soil	MEPNGGALLSAVRLEQTIKSPIYDGRQEFGAAGKLLRVSVNVLFSPTAAVIESALLMLLIGWIDYKTTDFAITLF
Ga0247668_11064931	3300024331	Soil	MEPNGGALLSAVQLEQPVKSPIHGGRQKFGAAGKSFRVNANVLFSPTAAVIESALLMLLIGWI
Ga0207701_101222113	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MEPNGGALLSAVQLEETVTLPRHDRREKLSAADKPPRVSINVLCSPTAAVIESALLMLLIGWVDYKTTDFAITLFYFAPVVLASWRAGRKAGWF
Ga0209686_11390222	3300026315	Soil	MSSAQLGQPVTLPIYNTRQHVTAADKPRRVSFDFLHGPTAAVIGSALLMLLIGWIDYKSTDFAITVFYFGPVVLATWR
Ga0209152_102327141	3300026325	Soil	MEPNRVALLSAIQLEQPVNLPTYDGRQEFTAADKSRRVSVNFLRSPTAAVIASALLMLLIGWIDYITD
Ga0209473_10683541	3300026330	Soil	LEQPFKSPIYDGRQQFTAAGKPLRVSIDSLRSPTAGVIESALLMLLIGWIDYKTTE
Ga0209057_10809251	3300026342	Soil	MERNGGALVSAVQVEGPVNSPIYDARQRFTAADKPLRVGVNFLCSPTAAVIESALLMLLIGWIDYKTTDFAITVFY
Ga0209059_11565461	3300026527	Soil	MSSAQLGQPVTLPIYNTRQHVTAADKPRRVSFDFLHGPTAAVIGSALLMLLIGWIDYKSTDFAITVFYFG
Ga0268264_123593401	3300028381	Switchgrass Rhizosphere	LSAFQLEQTVKSPIYDERQSFSAADKPLRVTALRSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAPVVLASWR
Ga0307292_102118971	3300028811	Soil	MEPNGGALLSAVQLEQPVNSPIYDARQRFTARDKPLRVSVNFLRSSTAAVIESALLMLLIGWIDYKT
Ga0307296_104805791	3300028819	Soil	MSAVQLEQPVNSPIYDARQRFPAADKPLHVGVNFLRSPTAAVIESALLMLLIGWIDYKTTDFAITVFYFG
Ga0170824_1188732081	3300031231	Forest Soil	MSAVQLEQPVNSPIYDARQGFTAADKPFRISINFFRSPTAAVIESALLMLLIGWIDYK
Ga0170820_122143452	3300031446	Forest Soil	LSAFQLEQTVKSPIYDGRREFSAADKPLRVSVLRSPTAAVIASALLMLLIGWIDYITDFN
Ga0170820_164644532	3300031446	Forest Soil	MEPNGGALLSAVQLEQPVKSPIYGGRQEFGAADKPLRVSVNFLRSPTAAVIESAVLMLLIGWIDYKTTDFAITVFYFGPVVLDT
Ga0170819_164064762	3300031469	Forest Soil	MIHIFKRLWIVHGLRFVLMERNGGALTSAVQLEQTVNSPIYDARQRFTAGDKPLRTAINFLRSPTAAVIESALLMLLIGWIDYKTTDFAVTVFYF
Ga0170819_164880252	3300031469	Forest Soil	LSAVQLEQPVNSPLYDRRQNFSAADKPLRVSVNVLRSPTAAVIESALLMLLIGWIDYKTTDF
Ga0170818_1085191041	3300031474	Forest Soil	LSAFQLEQTVKSRIYDGQRKFSAADKPLRVTALRSPTAAVIESALLMLLIGWIDYKTTDFAITLFYFAP
Ga0307469_111221982	3300031720	Hardwood Forest Soil	MEPNGGALLSAVQLQQPVKSPIHGRRQKFGTAGKPFCVSANVLFSPTAAVIESALLMLLIGWI
Ga0306925_105771251	3300031890	Soil	MEPNGGALLSAIQLEQTVKPPTYERRQKSSAAGKLLRVSVNILCSPTAAVIESALLMLLIGWIDYVTDFNVTVFYFVPVVLATWRAG
Ga0310909_104410831	3300031947	Soil	MSTVQLEQAINSPIHDAQQQLPAANKPFCDSFDFLLSPTGAVIESALLMLLIGWIDYVTDFNVTVFYFVP
Ga0306926_127399931	3300031954	Soil	MERIGGALLPAVQPEQPFNSRISDARQQFTAAEKPLRVGVNFLCSPTAAVVASALLMLLIGWIDYITDFNVTVFYFVP
Ga0306924_126151922	3300032076	Soil	LSAVQLEQPFNSSISEVRQGFTGTEKPLRVSVNFVCSPTAAVIESALLMLLIG
Ga0310889_104386222	3300032179	Soil	LSAVQLEQTAKSPIYDWRQKFSAADKPPRVSVNVLRSPTAAVIESALLTLLIGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences