Metagenome Family F061542

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061542
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	54 residues
Representative Sequence	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Number of Associated Samples	97
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.92 %
% of genes near scaffold ends (potentially truncated)	65.65 %
% of genes from short scaffolds (< 2000 bps)	71.76 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (51.908 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (35.114 % of family members)
Environment Ontology (ENVO)	Unclassified (78.626 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (82.443 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.67% β-sheet: 0.00% Coil/Unstructured: 78.33%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03796	DnaB_C	9.92
PF07659	DUF1599	6.87
PF04545	Sigma70_r4	5.34
PF02467	Whib	3.82
PF13481	AAA_25	3.05
PF01807	zf-CHC2	1.53
PF01930	Cas_Cas4	1.53
PF13578	Methyltransf_24	1.53
PF12705	PDDEXK_1	1.53
PF02945	Endonuclease_7	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	9.92
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	9.92
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	1.53
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	1.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
All Organisms	root	All Organisms	48.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
cellular organisms	root	All Organisms → cellular organisms	25.19 %
Viruses	superkingdom	All Organisms → Viruses	22.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.21 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.21 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.21 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	12.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	12.21 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.53 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	12.21 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1.53 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	1.53 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	12.21 %
Puerhibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Puerhibacterium	1.53 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	1.53 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.56 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	12.21 %
Puerhibacterium puerhi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Puerhibacterium → Puerhibacterium puerhi	1.53 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	1.53 %
Nocardioides massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides massiliensis	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_109075924	Not Available	586	Open in IMG/M
3300002835\|B570J40625_100084109	All Organisms → Viruses → Predicted Viral	4079	Open in IMG/M
3300002835\|B570J40625_101102364	Not Available	671	Open in IMG/M
3300003277\|JGI25908J49247_10091376	Not Available	740	Open in IMG/M
3300003277\|JGI25908J49247_10126698	Not Available	603	Open in IMG/M
3300003388\|JGI25910J50241_10018334	All Organisms → Viruses → Predicted Viral	2473	Open in IMG/M
3300003393\|JGI25909J50240_1085812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300003394\|JGI25907J50239_1010196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2208	Open in IMG/M
3300003394\|JGI25907J50239_1013967	All Organisms → Viruses → Predicted Viral	1850	Open in IMG/M
3300003394\|JGI25907J50239_1102872	Not Available	556	Open in IMG/M
3300003395\|JGI25917J50250_1093931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300003404\|JGI25920J50251_10037723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1374	Open in IMG/M
3300003431\|JGI25913J50563_1015977	All Organisms → Viruses → Predicted Viral	1249	Open in IMG/M
3300003616\|JGI25928J51866_1014251	All Organisms → Viruses → Predicted Viral	2263	Open in IMG/M
3300004805\|Ga0007792_10230392	Not Available	569	Open in IMG/M
3300005517\|Ga0070374_10048865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2201	Open in IMG/M
3300005581\|Ga0049081_10093141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1126	Open in IMG/M
3300005581\|Ga0049081_10267841	Not Available	595	Open in IMG/M
3300005584\|Ga0049082_10027350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1988	Open in IMG/M
3300007735\|Ga0104988_10544	Not Available	17416	Open in IMG/M
3300008107\|Ga0114340_1054110	All Organisms → Viruses → Predicted Viral	1746	Open in IMG/M
3300008107\|Ga0114340_1136652	Not Available	923	Open in IMG/M
3300008107\|Ga0114340_1227077	Not Available	593	Open in IMG/M
3300008119\|Ga0114354_1023638	Not Available	5248	Open in IMG/M
3300008266\|Ga0114363_1111859	Not Available	964	Open in IMG/M
3300008266\|Ga0114363_1182084	Not Available	665	Open in IMG/M
3300009068\|Ga0114973_10586271	Not Available	572	Open in IMG/M
3300009152\|Ga0114980_10461385	Not Available	725	Open in IMG/M
3300009154\|Ga0114963_10026957	All Organisms → Viruses → Predicted Viral	3802	Open in IMG/M
3300009155\|Ga0114968_10479451	Not Available	670	Open in IMG/M
3300009158\|Ga0114977_10307331	Not Available	902	Open in IMG/M
3300009159\|Ga0114978_10194654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1284	Open in IMG/M
3300009159\|Ga0114978_10742184	Not Available	557	Open in IMG/M
3300009161\|Ga0114966_10272653	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300009161\|Ga0114966_10494804	Not Available	698	Open in IMG/M
3300009161\|Ga0114966_10501250	Not Available	692	Open in IMG/M
3300009164\|Ga0114975_10026094	Not Available	3517	Open in IMG/M
3300009183\|Ga0114974_10486032	Not Available	694	Open in IMG/M
3300009184\|Ga0114976_10595575	Not Available	561	Open in IMG/M
3300010334\|Ga0136644_10248435	Not Available	1045	Open in IMG/M
3300010885\|Ga0133913_11756426	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300011010\|Ga0139557_1013744	All Organisms → Viruses → Predicted Viral	1550	Open in IMG/M
3300012000\|Ga0119951_1005620	Not Available	5919	Open in IMG/M
3300012006\|Ga0119955_1010193	All Organisms → Viruses → Predicted Viral	3593	Open in IMG/M
3300012012\|Ga0153799_1004588	All Organisms → Viruses → Predicted Viral	3468	Open in IMG/M
3300012012\|Ga0153799_1005622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3057	Open in IMG/M
3300012013\|Ga0153805_1074881	Not Available	574	Open in IMG/M
3300013372\|Ga0177922_10628506	Not Available	502	Open in IMG/M
3300014050\|Ga0119952_1003544	Not Available	8023	Open in IMG/M
3300017716\|Ga0181350_1157968	Not Available	526	Open in IMG/M
3300017722\|Ga0181347_1030786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides massiliensis	1669	Open in IMG/M
3300017722\|Ga0181347_1200004	Not Available	525	Open in IMG/M
3300017723\|Ga0181362_1110273	Not Available	543	Open in IMG/M
3300017754\|Ga0181344_1050790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1237	Open in IMG/M
3300017754\|Ga0181344_1153219	Not Available	657	Open in IMG/M
3300017754\|Ga0181344_1165487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Puerhibacterium → Puerhibacterium puerhi	628	Open in IMG/M
3300017754\|Ga0181344_1219865	Not Available	530	Open in IMG/M
3300017761\|Ga0181356_1173142	Not Available	656	Open in IMG/M
3300017761\|Ga0181356_1208242	Not Available	575	Open in IMG/M
3300017774\|Ga0181358_1214832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Puerhibacterium → Puerhibacterium puerhi	622	Open in IMG/M
3300017777\|Ga0181357_1244899	Not Available	625	Open in IMG/M
3300017777\|Ga0181357_1256202	Not Available	606	Open in IMG/M
3300017777\|Ga0181357_1256367	Not Available	606	Open in IMG/M
3300017778\|Ga0181349_1267887	Not Available	564	Open in IMG/M
3300017780\|Ga0181346_1028969	Not Available	2301	Open in IMG/M
3300018868\|Ga0187844_10044353	All Organisms → Viruses → Predicted Viral	2129	Open in IMG/M
3300019784\|Ga0181359_1004723	All Organisms → Viruses → Predicted Viral	4350	Open in IMG/M
3300019784\|Ga0181359_1218279	Not Available	601	Open in IMG/M
3300020506\|Ga0208091_1010980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1124	Open in IMG/M
3300020532\|Ga0208601_1011321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1388	Open in IMG/M
3300020554\|Ga0208599_1031291	Not Available	821	Open in IMG/M
3300021963\|Ga0222712_10257339	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	1114	Open in IMG/M
3300022190\|Ga0181354_1113259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	876	Open in IMG/M
3300022190\|Ga0181354_1166875	Not Available	678	Open in IMG/M
3300022407\|Ga0181351_1021169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2748	Open in IMG/M
3300022752\|Ga0214917_10055839	Not Available	2620	Open in IMG/M
3300023174\|Ga0214921_10047138	All Organisms → Viruses → Predicted Viral	3858	Open in IMG/M
3300023174\|Ga0214921_10320550	Not Available	847	Open in IMG/M
3300027156\|Ga0255078_1034000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1076	Open in IMG/M
3300027292\|Ga0255134_1024667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1031	Open in IMG/M
3300027534\|Ga0255125_1016459	All Organisms → Viruses → Predicted Viral	1710	Open in IMG/M
3300027593\|Ga0255118_1031361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	949	Open in IMG/M
3300027644\|Ga0209356_1125174	Not Available	733	Open in IMG/M
3300027679\|Ga0209769_1181043	Not Available	658	Open in IMG/M
3300027688\|Ga0209553_1047035	All Organisms → Viruses → Predicted Viral	1713	Open in IMG/M
3300027688\|Ga0209553_1263614	Not Available	535	Open in IMG/M
3300027707\|Ga0209443_1095426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1135	Open in IMG/M
3300027707\|Ga0209443_1284950	Not Available	553	Open in IMG/M
3300027732\|Ga0209442_1009050	All Organisms → cellular organisms → Bacteria	4897	Open in IMG/M
3300027734\|Ga0209087_1042321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2119	Open in IMG/M
3300027744\|Ga0209355_1302789	Not Available	606	Open in IMG/M
3300027759\|Ga0209296_1003801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10171	Open in IMG/M
3300027763\|Ga0209088_10000911	Not Available	19896	Open in IMG/M
3300027770\|Ga0209086_10002099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15782	Open in IMG/M
3300027770\|Ga0209086_10024690	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3696	Open in IMG/M
3300027770\|Ga0209086_10103144	All Organisms → Viruses → Predicted Viral	1457	Open in IMG/M
3300027777\|Ga0209829_10003058	Not Available	12364	Open in IMG/M
3300027782\|Ga0209500_10024462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3471	Open in IMG/M
3300027797\|Ga0209107_10030500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3093	Open in IMG/M
3300027798\|Ga0209353_10021126	All Organisms → Viruses → Predicted Viral	3065	Open in IMG/M
3300027808\|Ga0209354_10040083	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
3300027808\|Ga0209354_10224042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	759	Open in IMG/M
3300027808\|Ga0209354_10266140	Not Available	686	Open in IMG/M
3300027808\|Ga0209354_10323716	Not Available	610	Open in IMG/M
3300027971\|Ga0209401_1011131	All Organisms → Viruses → Predicted Viral	4971	Open in IMG/M
3300027971\|Ga0209401_1082504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1364	Open in IMG/M
3300027973\|Ga0209298_10054575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1845	Open in IMG/M
3300027973\|Ga0209298_10291127	Not Available	639	Open in IMG/M
3300028025\|Ga0247723_1004076	Not Available	7064	Open in IMG/M
3300028025\|Ga0247723_1153921	Not Available	536	Open in IMG/M
3300028394\|Ga0304730_1188610	Not Available	792	Open in IMG/M
3300031707\|Ga0315291_10096879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3191	Open in IMG/M
3300031746\|Ga0315293_10161665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1863	Open in IMG/M
3300031857\|Ga0315909_10852300	Not Available	569	Open in IMG/M
3300031885\|Ga0315285_10066168	All Organisms → Viruses → Predicted Viral	3295	Open in IMG/M
3300032046\|Ga0315289_11089035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300032092\|Ga0315905_10264223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	1665	Open in IMG/M
3300032118\|Ga0315277_10063502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4248	Open in IMG/M
3300032118\|Ga0315277_10484881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1244	Open in IMG/M
3300033233\|Ga0334722_10128122	All Organisms → Viruses → Predicted Viral	1911	Open in IMG/M
3300034012\|Ga0334986_0002503	Not Available	14948	Open in IMG/M
3300034020\|Ga0335002_0674316	Not Available	524	Open in IMG/M
3300034062\|Ga0334995_0241716	Not Available	1222	Open in IMG/M
3300034062\|Ga0334995_0514448	Not Available	716	Open in IMG/M
3300034093\|Ga0335012_0380648	Not Available	695	Open in IMG/M
3300034104\|Ga0335031_0635051	Not Available	624	Open in IMG/M
3300034106\|Ga0335036_0596103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300034112\|Ga0335066_0183348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1253	Open in IMG/M
3300034272\|Ga0335049_0643340	Not Available	651	Open in IMG/M
3300034280\|Ga0334997_0787924	Not Available	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.47%
Terrestrial	Environmental → Terrestrial	1.53%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.53%
Marine	Environmental → Aquatic → Marine	0.76%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	48.09%
Lentic	Environmental → Aquatic → Freshwater → Lentic	43.51%
River	Environmental → Aquatic → Freshwater → River	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.53%
Ice	Environmental → Aquatic → Freshwater → Ice	1.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.98%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.11%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.82%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.53%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	35.11%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	21.37%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.11%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.11%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.58%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.82%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.05%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.29%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.53%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.53%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.76%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.76%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300007735	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014Oct	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300018868	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020532	Freshwater microbial communities from Lake Mendota, WI - 09NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027292	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d	Environmental	Open in IMG/M
3300027534	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8d	Environmental	Open in IMG/M
3300027593	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1090759243	3300002408	Freshwater	MICEVCKSGGELNKIGQFKRATTMHKKCKEDCGCQHK
B570J40625_1000841097	3300002835	Freshwater	MICEVCKAGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAMAEPMRTQYPLE
B570J40625_1011023641	3300002835	Freshwater	MICDLCRSGGELNKNGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
JGI25908J49247_100913762	3300003277	Freshwater Lake	MICEVCKAGGELNKIGQFKRATTMHKKCKEDXGCQHKTGPEAGSLAFAMAEPMRTQYPLE
JGI25908J49247_101266982	3300003277	Freshwater Lake	MICEVCKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
JGI25910J50241_100183345	3300003388	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
JGI25909J50240_10858121	3300003393	Freshwater Lake	GGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE*
JGI25907J50239_10101961	3300003394	Freshwater Lake	MICEVCKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGP
JGI25907J50239_10139673	3300003394	Freshwater Lake	MICEXCKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
JGI25907J50239_11028721	3300003394	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGP
JGI25917J50250_10939312	3300003395	Freshwater Lake	RIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE*
JGI25920J50251_100377233	3300003404	Freshwater Lake	MICELCKXGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
JGI25913J50563_10159773	3300003431	Freshwater Lake	ELNKIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAMAEPMRTQYPLE*
JGI25928J51866_10142515	3300003616	Freshwater Lake	CKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE*
Ga0007792_102303922	3300004805	Freshwater	MICELCKSGGELNKIGQFKRAANMHKKCKEGCNCQHKTGPE
Ga0070374_100488651	3300005517	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAM
Ga0049081_100931412	3300005581	Freshwater Lentic	MICDLCRSGGELNRTGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0049081_102678411	3300005581	Freshwater Lentic	MICEVCKSGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAF
Ga0049082_100273507	3300005584	Freshwater Lentic	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAE
Ga0104988_1054419	3300007735	Freshwater	MICERCKSGGELNKIGQFKRASNMHDKCKGDCGCQHKTGPGVGSRAKVLAEPLRTQFPLE
Ga0114340_10541101	3300008107	Freshwater, Plankton	GQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE*
Ga0114340_11366521	3300008107	Freshwater, Plankton	MICDLCRSGGELNRTGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEP
Ga0114340_12270773	3300008107	Freshwater, Plankton	MICDLCRLGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEP
Ga0114354_10236381	3300008119	Freshwater, Plankton	MICDLCRTGGELNKTGQFKRALTMHKKCKEECGCQHQ
Ga0114363_11118591	3300008266	Freshwater, Plankton	MICDLCRSGGELNKTGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEP
Ga0114363_11820844	3300008266	Freshwater, Plankton	MICDLCRSGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMA
Ga0114973_105862714	3300009068	Freshwater Lake	MICELCKSGGELNRTGQFKRAFAMHKKCKEDCGCQHQTGPGVGSLLKALAEPMR
Ga0114980_104613854	3300009152	Freshwater Lake	MICDLCRSGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0114963_100269571	3300009154	Freshwater Lake	RTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE*
Ga0114968_104794514	3300009155	Freshwater Lake	MICELCRTGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPL
Ga0114977_103073311	3300009158	Freshwater Lake	MICERCKSGGELNKIGQFKRASNMHDKCKGDCGCQHKTGP
Ga0114978_101946543	3300009159	Freshwater Lake	MICDLCKSGGELNRTGQFKRATTMHKKCKEDCGCQHQTGPGVGSLLKALAEPMRTQYPLE
Ga0114978_107421842	3300009159	Freshwater Lake	MICEVCKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEA
Ga0114966_102726531	3300009161	Freshwater Lake	IGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE*
Ga0114966_104948044	3300009161	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRT
Ga0114966_105012503	3300009161	Freshwater Lake	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRT
Ga0114975_100260948	3300009164	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSLAFAMAEPMRTQYPLE
Ga0114974_104860324	3300009183	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPL
Ga0114976_105955753	3300009184	Freshwater Lake	MICELCRSGGELNKTGQFKRALTMHKKCKEECGCQHQTGP
Ga0136644_102484351	3300010334	Freshwater Lake	MICELCKSGGELNRTGQFKRAFAMHKKCKEDCGCQHQTG
Ga0133913_117564263	3300010885	Freshwater Lake	MICELCKSGGELNKIGQFKRAANMHKKCKEGCNCQHKTGPEVGSNAKVLEPLRTQYPLE*
Ga0139557_10137441	3300011010	Freshwater	EVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSLAFAMAEPMRTQYPLE*
Ga0119951_10056206	3300012000	Freshwater	MICDLCRSGGELNKIGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0119955_10101934	3300012006	Freshwater	MICDLCRSGGELNRAGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0153799_100458810	3300012012	Freshwater	MICDLCRSGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPL
Ga0153799_10056227	3300012012	Freshwater	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAMAEPMRTQYPL
Ga0153805_10748813	3300012013	Surface Ice	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQH
Ga0177922_106285063	3300013372	Freshwater	MICDLCRSGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAF
Ga0119952_100354411	3300014050	Freshwater	MICDLCRSGGELNKIGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0181350_11579681	3300017716	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGS
Ga0181347_10307865	3300017722	Freshwater Lake	MICDLCRTGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQY
Ga0181347_12000043	3300017722	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMA
Ga0181362_11102731	3300017723	Freshwater Lake	MICEVCKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPETGSRAMAMAEPMRT
Ga0181344_10507902	3300017754	Freshwater Lake	MICEVCKSGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0181344_11532191	3300017754	Freshwater Lake	MICELCKSGGELNRIGQFKRAANMHKKCKEDCNCQHKTGPEVGSNGKVLAEPLRTQY
Ga0181344_11654871	3300017754	Freshwater Lake	MICDLCRSGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFVMAEPMRTQYPLE
Ga0181344_12198652	3300017754	Freshwater Lake	MICERCKSGGELNKMGQFKRASNMHDKCKGDCGCQHKTGPGTGSRAKVLAEPLRTQFPLE
Ga0181356_11731424	3300017761	Freshwater Lake	MICDLCRTGGELNKTGQFKRALTMHKKCKEECGCQHQTGP
Ga0181356_12082421	3300017761	Freshwater Lake	MICELCRTGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0181358_12148322	3300017774	Freshwater Lake	TGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0181357_12448992	3300017777	Freshwater Lake	MICDLCRSGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0181357_12562024	3300017777	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMA
Ga0181357_12563674	3300017777	Freshwater Lake	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMA
Ga0181349_12678871	3300017778	Freshwater Lake	MICEVCKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSR
Ga0181346_10289696	3300017780	Freshwater Lake	MLCGVCKSGGELNKTGQFKRAVTMHKKCKGDCGCQHQTGPGVGSLAKALAEPMRTQYPLE
Ga0187844_100443534	3300018868	Freshwater	MICALCRSGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0181359_10047233	3300019784	Freshwater Lake	MICELCRSGGELNRIGQFKRAFTMHKKCKEKCGCQHQTGPGVGSRAEEMAEPMRTQYPLE
Ga0181359_12182791	3300019784	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGF
Ga0208091_10109803	3300020506	Freshwater	RGRGKGGRMICDLCRSGGELNRTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0208601_10113213	3300020532	Freshwater	MICERCKSGGELNKMGQFKRASNMHDKCKGDCGCQHKTGPGTGSQAKVLAEPLRTQYPLE
Ga0208599_10312912	3300020554	Freshwater	MICEVCKSGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAMAEPMRTQYPLE
Ga0222712_102573391	3300021963	Estuarine Water	MICDLCRSGGELNRTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0181354_11132591	3300022190	Freshwater Lake	EKKRKQMICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0181354_11668751	3300022190	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAM
Ga0181351_10211691	3300022407	Freshwater Lake	MICDLCRTGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0214917_100558397	3300022752	Freshwater	MICEVCKSGGELNKIGQFKRATTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0214921_100471389	3300023174	Freshwater	MICDLCRTGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0214921_103205501	3300023174	Freshwater	MICDLCRSGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEM
Ga0255078_10340001	3300027156	Freshwater	CDLCRSGGELNRTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0255134_10246672	3300027292	Freshwater	CKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0255125_10164594	3300027534	Freshwater	LCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSLAFAMAEPMRTQYPLE
Ga0255118_10313612	3300027593	Freshwater	CKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSLAFAMAEPMRTQYPLE
Ga0209356_11251744	3300027644	Freshwater Lake	MICEVCKAGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQY
Ga0209769_11810434	3300027679	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMR
Ga0209553_10470354	3300027688	Freshwater Lake	RRMICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209553_12636143	3300027688	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAE
Ga0209443_10954261	3300027707	Freshwater Lake	AGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209443_12849504	3300027707	Freshwater Lake	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQ
Ga0209442_10090509	3300027732	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209087_10423214	3300027734	Freshwater Lake	MICELCKSGGELNRTGQFKRAFTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0209355_13027891	3300027744	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAMAEPMRTQYP
Ga0209296_10038014	3300027759	Freshwater Lake	MICELCKSGGELNRTGQFKRAFAMHKKCKEDCGCQHQTGPGVGSLLKALAEPMRTQYPLE
Ga0209088_1000091126	3300027763	Freshwater Lake	MICDLCKSGGELNRTGQFKRATTMHKKCKEDCGCQHQTGPGVGSLAKALAEPMRTQYPLE
Ga0209086_1000209914	3300027770	Freshwater Lake	MICELCRSGGELNKTGQFKRAFTMHKKCKEACGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0209086_100246901	3300027770	Freshwater Lake	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEP
Ga0209086_101031444	3300027770	Freshwater Lake	MICELCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209829_100030588	3300027777	Freshwater Lake	MICDLCRSGGELNKTGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQYPLE
Ga0209500_100244629	3300027782	Freshwater Lake	MICEICKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAG
Ga0209107_100305007	3300027797	Freshwater And Sediment	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQ
Ga0209353_100211262	3300027798	Freshwater Lake	MICELCKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209354_100400831	3300027808	Freshwater Lake	GGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209354_102240421	3300027808	Freshwater Lake	KGGRMICDLCRSGGELNKTGQFKRAVTMHKKCKEDCGCQHQTGPGVGSLAFVMAEPMRTQYPLE
Ga0209354_102661404	3300027808	Freshwater Lake	MICEVCKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAM
Ga0209354_103237161	3300027808	Freshwater Lake	MICEVCKTGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPM
Ga0209401_101113113	3300027971	Freshwater Lake	MICEVCKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0209401_10825042	3300027971	Freshwater Lake	MICNLCRSGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0209298_100545754	3300027973	Freshwater Lake	MICELCRSGGELNKTGQFKRAFTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0209298_102911271	3300027973	Freshwater Lake	MICELCRSGGELNKTGQFKRAFTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0247723_100407610	3300028025	Deep Subsurface Sediment	MICDLCRSGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMAEPMRTQFPLA
Ga0247723_11539211	3300028025	Deep Subsurface Sediment	MICDLCRSGGELNKTGQFKRALTMHKKCKEDCGCQHQTGPGVGSRAKEMA
Ga0304730_11886101	3300028394	Freshwater Lake	MICELCRSGGELNRIGQFKRAFTMHKKCKEKCGCQHQTGPGVGSRAEEMAEPMRTQYP
Ga0315291_100968798	3300031707	Sediment	MICEVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAM
Ga0315293_101616652	3300031746	Sediment	MICEVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0315909_108523001	3300031857	Freshwater	MICDLCRTGGELNKTGQFKRALTMHKKCKEECGCQHQTGPG
Ga0315297_104537082	3300031873	Sediment	RNITTSTRGSRGSSRGRSKGMICEVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0315285_100661684	3300031885	Sediment	MICEVCKSDGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0315289_110890351	3300032046	Sediment	GRSKGMICEVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0315905_102642235	3300032092	Freshwater	MICEICKAGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSLAFAM
Ga0315277_100635021	3300032118	Sediment	MICEVCKSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQ
Ga0315277_104848813	3300032118	Sediment	KSGGELNRIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0334722_101281222	3300033233	Sediment	MICEVCKTGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE
Ga0334986_0002503_4342_4524	3300034012	Freshwater	MICEVCRSGGELNKTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAMAMAEPMRTQYPLE
Ga0335002_0674316_2_148	3300034020	Freshwater	MICEVCKAGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEVGSLAFAM
Ga0334995_0241716_1_171	3300034062	Freshwater	MICDLCRSGGELNKNGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQY
Ga0334995_0514448_546_716	3300034062	Freshwater	MICDLCRSGGELNRTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLAFAMAEPMRTQY
Ga0335012_0380648_1_126	3300034093	Freshwater	MICDLCRSGGELNKNGQFKRAVTMHKKCKEDCGCQHQTGPGV
Ga0335031_0635051_2_130	3300034104	Freshwater	MICEVCRSGGELNKTGQFKRAITMHKKCKEDCGCQHQTGPGVG
Ga0335036_0596103_3_173	3300034106	Freshwater	LCRLGGELNKTGQFKRALTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0335066_0183348_277_459	3300034112	Freshwater	MICDLCRTGGELNKAGQFKRAFTMHKKCKEECGCQHQTGPGVGSRAKEMAEPMRTQYPLE
Ga0335049_0643340_514_651	3300034272	Freshwater	MICDLCRSGGELNRTGQFKRAITMHKKCKEDCGCQHQTGPGVGSLA
Ga0334997_0787924_394_573	3300034280	Freshwater	MICEVCKAGGELNKIGQFKRATTMHKKCKEDCGCQHKTGPEAGSRAMAMAEPMRTQYPLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences