Metagenome / Metatranscriptome Family F061540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061540
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	55 residues
Representative Sequence	MKKSIILVSALSVVVMALVSCASDSNVDPFRVHTETTTPYHEPAPAHDQIGG
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	72.52 %
% of genes from short scaffolds (< 2000 bps)	95.42 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.977 % of family members)
Environment Ontology (ENVO)	Unclassified (29.771 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.382 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.75% β-sheet: 0.00% Coil/Unstructured: 66.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13302	Acetyltransf_3	5.34
PF03544	TonB_C	2.29
PF00903	Glyoxalase	1.53
PF03400	DDE_Tnp_IS1	1.53
PF12697	Abhydrolase_6	0.76
PF12704	MacB_PCD	0.76
PF14534	DUF4440	0.76
PF13673	Acetyltransf_10	0.76
PF06271	RDD	0.76
PF00589	Phage_integrase	0.76
PF01936	NYN	0.76
PF12146	Hydrolase_4	0.76
PF13643	DUF4145	0.76
PF04773	FecR	0.76
PF13430	DUF4112	0.76
PF07992	Pyr_redox_2	0.76
PF04542	Sigma70_r2	0.76
PF00850	Hist_deacetyl	0.76
PF12680	SnoaL_2	0.76
PF00583	Acetyltransf_1	0.76
PF06441	EHN	0.76
PF07617	DUF1579	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.29
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.53
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.53
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.76
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.76
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.76
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.76
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.76
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.76
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.73 %
Unclassified	root	N/A	44.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.96 %
Unclassified	root	N/A	44.27 %
Viruses	superkingdom	All Organisms → Viruses	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.96 %
Unclassified	root	N/A	44.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25.19 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	19.08 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.08 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.53 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.08 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.53 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.08 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.53 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.76 %
Prosthecobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.08 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.53 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.76 %
Prosthecobacter dejongeii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter dejongeii	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.27 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.08 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.53 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.76 %
Prosthecobacter dejongeii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter dejongeii	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01DTE6O	Not Available	524	Open in IMG/M
2088090014\|GPIPI_17051653	Not Available	2038	Open in IMG/M
2140918007\|ConsensusfromContig164284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1124	Open in IMG/M
2170459016\|G1P06HT01CWB6E	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
2189573004\|GZGWRS401D5PS2	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300000550\|F24TB_10176413	Not Available	616	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1023212	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300000955\|JGI1027J12803_107038235	Not Available	742	Open in IMG/M
3300002568\|C688J35102_120108962	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300004633\|Ga0066395_10602220	Not Available	644	Open in IMG/M
3300005186\|Ga0066676_10293591	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005288\|Ga0065714_10457170	Not Available	534	Open in IMG/M
3300005289\|Ga0065704_10433926	Not Available	719	Open in IMG/M
3300005290\|Ga0065712_10083937	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300005290\|Ga0065712_10587091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005293\|Ga0065715_10226522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1250	Open in IMG/M
3300005294\|Ga0065705_10464189	Not Available	812	Open in IMG/M
3300005329\|Ga0070683_100459753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1215	Open in IMG/M
3300005329\|Ga0070683_100888106	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005332\|Ga0066388_104059424	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005365\|Ga0070688_101291998	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005367\|Ga0070667_102248207	Not Available	514	Open in IMG/M
3300005434\|Ga0070709_11482090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300005439\|Ga0070711_100136252	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300005456\|Ga0070678_100613958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300005456\|Ga0070678_101502680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300005468\|Ga0070707_100954223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300005548\|Ga0070665_100337110	Not Available	1512	Open in IMG/M
3300005549\|Ga0070704_100380829	Not Available	1199	Open in IMG/M
3300005560\|Ga0066670_10997163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005578\|Ga0068854_102140328	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005713\|Ga0066905_100920077	Not Available	766	Open in IMG/M
3300005764\|Ga0066903_100250465	All Organisms → cellular organisms → Bacteria	2732	Open in IMG/M
3300005764\|Ga0066903_100912638	All Organisms → Viruses → Predicted Viral	1591	Open in IMG/M
3300005764\|Ga0066903_106226634	Not Available	624	Open in IMG/M
3300005764\|Ga0066903_108178361	Not Available	535	Open in IMG/M
3300006028\|Ga0070717_10327670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1365	Open in IMG/M
3300006046\|Ga0066652_100454653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1179	Open in IMG/M
3300006046\|Ga0066652_101470466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300007788\|Ga0099795_10402605	Not Available	622	Open in IMG/M
3300009098\|Ga0105245_11425317	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300009137\|Ga0066709_100448354	Not Available	1804	Open in IMG/M
3300009137\|Ga0066709_102775251	Not Available	651	Open in IMG/M
3300009143\|Ga0099792_10537861	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300009143\|Ga0099792_11140578	Not Available	527	Open in IMG/M
3300009147\|Ga0114129_12108835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	680	Open in IMG/M
3300009162\|Ga0075423_10808366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300009792\|Ga0126374_10806574	Not Available	718	Open in IMG/M
3300010043\|Ga0126380_11760655	Not Available	559	Open in IMG/M
3300010044\|Ga0126310_11478548	Not Available	556	Open in IMG/M
3300010046\|Ga0126384_10392573	Not Available	1169	Open in IMG/M
3300010154\|Ga0127503_11331852	Not Available	618	Open in IMG/M
3300010303\|Ga0134082_10551402	Not Available	507	Open in IMG/M
3300010335\|Ga0134063_10501309	Not Available	608	Open in IMG/M
3300010358\|Ga0126370_12173728	Not Available	546	Open in IMG/M
3300010360\|Ga0126372_12300738	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010361\|Ga0126378_10698456	Not Available	1126	Open in IMG/M
3300010361\|Ga0126378_12482391	Not Available	592	Open in IMG/M
3300010366\|Ga0126379_10352106	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300010366\|Ga0126379_11079628	Not Available	908	Open in IMG/M
3300010376\|Ga0126381_100886725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300010376\|Ga0126381_100923628	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300010376\|Ga0126381_101215898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1089	Open in IMG/M
3300010397\|Ga0134124_11676356	Not Available	667	Open in IMG/M
3300010398\|Ga0126383_12016591	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010398\|Ga0126383_13257392	Not Available	530	Open in IMG/M
3300012202\|Ga0137363_10218129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1538	Open in IMG/M
3300012202\|Ga0137363_10554136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	968	Open in IMG/M
3300012203\|Ga0137399_10574229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	947	Open in IMG/M
3300012211\|Ga0137377_10467201	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012285\|Ga0137370_10490008	Not Available	752	Open in IMG/M
3300012349\|Ga0137387_10843265	Not Available	663	Open in IMG/M
3300012582\|Ga0137358_10562768	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012683\|Ga0137398_10043850	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300012923\|Ga0137359_11320031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	609	Open in IMG/M
3300012924\|Ga0137413_10342262	Not Available	1058	Open in IMG/M
3300012924\|Ga0137413_10523397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	876	Open in IMG/M
3300012924\|Ga0137413_11697225	Not Available	519	Open in IMG/M
3300012927\|Ga0137416_11327975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300012948\|Ga0126375_11250468	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012951\|Ga0164300_10344796	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300012955\|Ga0164298_11602725	Not Available	513	Open in IMG/M
3300012971\|Ga0126369_11450813	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300012988\|Ga0164306_10622656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300012988\|Ga0164306_11892589	Not Available	519	Open in IMG/M
3300013307\|Ga0157372_12971278	Not Available	542	Open in IMG/M
3300014056\|Ga0120125_1180430	Not Available	521	Open in IMG/M
3300014157\|Ga0134078_10144594	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300015359\|Ga0134085_10590176	Not Available	516	Open in IMG/M
3300015372\|Ga0132256_102902270	Not Available	576	Open in IMG/M
3300016319\|Ga0182033_11922417	Not Available	538	Open in IMG/M
3300016357\|Ga0182032_10374225	Not Available	1146	Open in IMG/M
3300016404\|Ga0182037_11776419	Not Available	551	Open in IMG/M
3300016422\|Ga0182039_10759032	Not Available	859	Open in IMG/M
3300017927\|Ga0187824_10297712	Not Available	570	Open in IMG/M
3300018028\|Ga0184608_10074886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1377	Open in IMG/M
3300018028\|Ga0184608_10216537	Not Available	840	Open in IMG/M
3300018066\|Ga0184617_1277665	Not Available	504	Open in IMG/M
3300018433\|Ga0066667_10651709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	881	Open in IMG/M
3300019361\|Ga0173482_10200571	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300019882\|Ga0193713_1003122	All Organisms → cellular organisms → Bacteria	5369	Open in IMG/M
3300019886\|Ga0193727_1030092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1867	Open in IMG/M
3300019886\|Ga0193727_1071760	Not Available	1068	Open in IMG/M
3300019997\|Ga0193711_1017319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300020006\|Ga0193735_1045355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1317	Open in IMG/M
3300020018\|Ga0193721_1064303	Not Available	960	Open in IMG/M
3300020170\|Ga0179594_10088311	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300024279\|Ga0247692_1028043	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300025315\|Ga0207697_10041763	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300025315\|Ga0207697_10306673	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300025936\|Ga0207670_11333891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	609	Open in IMG/M
3300025940\|Ga0207691_10618401	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300026088\|Ga0207641_12151998	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026118\|Ga0207675_100900877	Not Available	901	Open in IMG/M
3300028379\|Ga0268266_10570936	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300028592\|Ga0247822_10716159	Not Available	810	Open in IMG/M
3300028768\|Ga0307280_10333653	Not Available	557	Open in IMG/M
3300028784\|Ga0307282_10195086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	967	Open in IMG/M
3300028819\|Ga0307296_10795399	Not Available	516	Open in IMG/M
3300031446\|Ga0170820_14199235	Not Available	533	Open in IMG/M
3300031719\|Ga0306917_11324979	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031879\|Ga0306919_10695832	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	783	Open in IMG/M
3300031941\|Ga0310912_10644290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300031942\|Ga0310916_10354000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1247	Open in IMG/M
3300031946\|Ga0310910_10583628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	886	Open in IMG/M
3300031947\|Ga0310909_10084451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter dejongeii	2524	Open in IMG/M
3300031947\|Ga0310909_11587572	Not Available	519	Open in IMG/M
3300031954\|Ga0306926_10451563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1583	Open in IMG/M
3300031954\|Ga0306926_11714875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300032076\|Ga0306924_11666951	Not Available	669	Open in IMG/M
3300033412\|Ga0310810_11375846	Not Available	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.21%
Host-Associated	Host-Associated	16.03%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.39%
Plants	Host-Associated → Plants	16.03%
Aquatic	Environmental → Aquatic	3.82%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.87%
Sediment	Environmental → Aquatic → Sediment	2.29%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.65%
Loam	Environmental → Terrestrial → Soil → Loam	13.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.29%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.29%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_00880240	2067725002	Soil	MKKSIILVSALSVVVMALVSCASDSNVDPFRVRTEATTPYHEPAPAHDQIGGVNL
GPIPI_03364770	2088090014	Soil	IILVSALSVVVMALVSCASDSDVDPMRVRADTTTPYHEAAPAHQSHITGM
A_all_C_00725760	2140918007	Soil	PAASTTVPAMKKSIILVSALSVVVMALVSCARDSDVDPFRATAPTTPVYHEAAPAHSNIGGTPD
2ZMR_00785960	2170459016	Switchgrass, Maize And Mischanthus Litter	TSTTVPDMKKSIIRVSALSVVVMALVSCASDSDVDPAQVRTDTTTPVYHEAAPAHVSHITGE
FG2_00034280	2189573004	Grass Soil	TVPAMKKSIILVSALSVVVLALVSCASHSDVDPFRVPPETTTPYHEPAPAHDNIGGVPDL
F24TB_101764131	3300000550	Soil	SIILVSALSVVVMAQVSCASDSDVDPFRLRADTTTPTQQPAPAHQSHISGM*
AP72_2010_repI_A100DRAFT_10232121	3300000837	Forest Soil	VPVMKKSIILVSALSVVVMALVSCASNSDVDPFRVNTDKTTPVYHEPAPPAPDHISGM*
JGI1027J12803_1070382352	3300000955	Soil	SIILVSALSVVGMALVSCASESDFDPARVGADAPTPYHEAAPEHQSHISGM*
C688J35102_1201089621	3300002568	Soil	MKKSIILVSALSVAVMALVSCASNSYEDPLRARTEPTTPEYHEAAPAHHNIGGTPD*
Ga0066395_106022201	3300004633	Tropical Forest Soil	MKKSIIVVSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIGGVPD*
Ga0066676_102935911	3300005186	Soil	AASTTVPAMKKSIILVSALSVVVMALVSCASDSNVDPFRVHTEATTPYHEPAPAHDQIGGVNL*
Ga0065714_104571701	3300005288	Miscanthus Rhizosphere	ATSTTVPAMKKSIILVSALSVVMMALVSCASDSDVDPSRVGTETTTPYHEAAPAHESHITGH*
Ga0065704_104339261	3300005289	Switchgrass Rhizosphere	PMKKSIILVSGLSVVVMALVSCASDSDVDPFRVRAETTTPYHEPAPAHQSHISP*
Ga0065712_100839375	3300005290	Miscanthus Rhizosphere	MKKSIILVSALSVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM*
Ga0065712_105870911	3300005290	Miscanthus Rhizosphere	AMKKSIILVSALSVVAMALVSCASDSDVQSFRVNTEPTTPVYQEAAPAHVSHITGE*
Ga0065715_102265221	3300005293	Miscanthus Rhizosphere	KKSIILVSALSVVVMALVSCASDSDVDPARVSTETTTPYHEAAPAHESHITGH*
Ga0065705_104641892	3300005294	Switchgrass Rhizosphere	MKKSIILVSGLSVVVMALVSCASDSNVDPFRVRADTTTPYHEPAP
Ga0070683_1004597533	3300005329	Corn Rhizosphere	MKKSIILVSALSAVVMALVSCASDSDVDPMRVRADTTGPTQGPAPAHESHIT
Ga0070683_1008881061	3300005329	Corn Rhizosphere	STTVPAMKKSIILVSALSVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM
Ga0066388_1040594241	3300005332	Tropical Forest Soil	ILVSALSVVVMALVSCASDSDANPFRVDTEKTPPAYHEPAPAHHNIAGLPD*
Ga0070688_1012919981	3300005365	Switchgrass Rhizosphere	AASTTVPAMKKSIILVSALSVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM*
Ga0070667_1022482071	3300005367	Switchgrass Rhizosphere	ASTTVPAMKKSIILVSALSVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM*
Ga0070709_114820901	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ALSVVVMALVSCASDSDVDPFRVNTEPTTPVYHEPAPAHKSHISDI*
Ga0070711_1001362523	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	STTVPAMKKSIILVSALSVVVMALVSCASDSDVDPARVRTDTTTPYHEPAPAHDQIGGVNL*
Ga0070678_1006139582	3300005456	Miscanthus Rhizosphere	AVVMALVSCASDSDVDPMRVRADTTGPTQGPAPAHESHITGM*
Ga0070678_1015026801	3300005456	Miscanthus Rhizosphere	STTVPAMKKSIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE
Ga0070707_1009542232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IILVSALSVVVMALVSCASNSYDDPFRARTEPTTPEYHEPAPAHDSIGGVDL*
Ga0070665_1003371101	3300005548	Switchgrass Rhizosphere	MKKSIILVSALSVVVMALVSCASNSYDDPFRARVEPTTPEYHEPAPAHNNIGGTPD*
Ga0070704_1003808294	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SVVVMALVSCASDSDVDPMRVRADTATPYHEAAPAHQSHITGM*
Ga0066670_109971632	3300005560	Soil	LVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGVNL*
Ga0068854_1021403281	3300005578	Corn Rhizosphere	SIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE*
Ga0066905_1009200772	3300005713	Tropical Forest Soil	VPAMKKSIILVSALSVVVMALVSCASDSDVDPARVRADTTTPYHEAAPAARSHITGM*
Ga0066903_1002504652	3300005764	Tropical Forest Soil	MKKSIILVSALSVVVMALVSCASNSDVDAFRVNPDKPTPVYNEAAPPHRSHITGE*
Ga0066903_1009126383	3300005764	Tropical Forest Soil	MKKSIIVLSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIG
Ga0066903_1062266341	3300005764	Tropical Forest Soil	MNKSIILVSALSVVVMALVSCASNSDVDPFRVSTDTTTPYHEAAPAHESHI
Ga0066903_1081783611	3300005764	Tropical Forest Soil	AASTTVPVMKKSIILVSALSVVVMALVSCASNSDVDPFRVNTEKTPPVYQEAAPAHESHLTGM*
Ga0070717_103276701	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PAMKKSIILVSALSVVVMALVSCASDSDVDPFRATGPTTPVYHEAAPAHQSHITGM*
Ga0066652_1004546531	3300006046	Soil	MKKSIILVSALSVVVMALVSCASNSDVDPFRVNSDKTTPVYHEPAPPPPDHISGM*
Ga0066652_1014704661	3300006046	Soil	TVPAMKKSIILVSALSVVVMALVSCASDSDVDPFRARTETTTPDYHEPAPAHHNIGGVPE
Ga0099795_104026052	3300007788	Vadose Zone Soil	MKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM*
Ga0105245_114253172	3300009098	Miscanthus Rhizosphere	MKKSIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE*
Ga0066709_1004483543	3300009137	Grasslands Soil	AMKKSIILVSTLSVVVMALVSCASDSDVDPFRVHTEATTPYHEPAPAHVSHITGQ*
Ga0066709_1027752511	3300009137	Grasslands Soil	TVPAMKKSIILVSALSVVVMALVSCASNSYDDPFRARTEPTTPEYHEPAPAHNNIGGVNL
Ga0099792_105378611	3300009143	Vadose Zone Soil	TVPVMKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM*
Ga0099792_111405781	3300009143	Vadose Zone Soil	STTVPAMKKSIILVSALSVVVMALVSCASDSDVDPFRATGPTTPVYHEAAPAHDHIGGM*
Ga0114129_121088352	3300009147	Populus Rhizosphere	MKKSIILVSALSVVVMALVSCASDSDVDPFRVHTDTPPPPQEAAPAHEHIGGVDL*
Ga0075423_108083661	3300009162	Populus Rhizosphere	ILVSALSVVVMALVSFASDSDVDPARVRFDTKTPTQEAAPAHESHITGM*
Ga0126374_108065741	3300009792	Tropical Forest Soil	MKKSIIVVSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIG
Ga0126380_117606551	3300010043	Tropical Forest Soil	IILVLALSVVVMALVSCANNSDVDPFRVNTEPTTPVSHEAAPAHVSHITGQ*
Ga0126310_114785482	3300010044	Serpentine Soil	MKKSIIVVSALSVVVMALVSCASDSDVDPFRARTEPTTPEYHEPAPAHHNIGGTPD*
Ga0126384_103925732	3300010046	Tropical Forest Soil	SALSVVVMALVSCASDSDVDPARVRADTTTPYHEAAPAARSHITGM*
Ga0127503_113318521	3300010154	Soil	IILVSALSVVVMALVSCASHSDDDPFRARTEPTTPEYHEPAPAHSNIGGTPE*
Ga0134082_105514022	3300010303	Grasslands Soil	AASTTVPAMKKSIILVSALSVVVMALVSCASNSYDDPFRARTQPTTPEYHEPAPAHHNIGGTPD*
Ga0134063_105013092	3300010335	Grasslands Soil	MKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGVNL*
Ga0126370_121737282	3300010358	Tropical Forest Soil	AASTTVPAMKKSIIPVSALAVVVMALVSCASDSDANPFRVDTEKTPPAYHEPAPAHHNIAGLPD*
Ga0126372_123007381	3300010360	Tropical Forest Soil	ASTTVPAMKKSIILVSALSVVVMALVSCASNSDVDPFRVNTEKTPPVYQEAAPAHESHLTGM*
Ga0126378_106984561	3300010361	Tropical Forest Soil	MKKSIILVSALSVVVMALVACASDSDVDPFRVRTDTTTPDYHEPAPAHDHIGGI*
Ga0126378_124823912	3300010361	Tropical Forest Soil	AMRKSIILVSALSVVVMALVSCATDSDVDPARARMDTTTPTYHEAAPSHTHSDQWGL*
Ga0126379_103521063	3300010366	Tropical Forest Soil	LALSVVAMALVSCANDSDVDPYRVHADKTPTYPEAGPPPDHISGM*
Ga0126379_110796283	3300010366	Tropical Forest Soil	MKKSIIVVSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIGGVPE*
Ga0126381_1008867252	3300010376	Tropical Forest Soil	MKKSIILGSALSVVAMALVSCAGNSDDDPYRVDTEPKPAPYHEPAPAHTNIGGLHD*
Ga0126381_1009236283	3300010376	Tropical Forest Soil	VMALVSCASNSDVDPFRVNTEKTPPVYQEAAPAHESHLTGM*
Ga0126381_1012158981	3300010376	Tropical Forest Soil	VVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIGGVPE*
Ga0134124_116763561	3300010397	Terrestrial Soil	SALSVVVMALVSCASDSDVDPARVRTETTTPYHEPAPAHDQIGGVNL*
Ga0126383_120165911	3300010398	Tropical Forest Soil	KSIIVVSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIGGVPD*
Ga0126383_132573921	3300010398	Tropical Forest Soil	VPAMKKSIILVSALSVVVMALVSCASDYDDPFRVNTEPTTPVYHEPAPVHDHIGGTPD*
Ga0137363_102181292	3300012202	Vadose Zone Soil	STTVPAMKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM*
Ga0137363_105541362	3300012202	Vadose Zone Soil	MKKSIILVSALSVVVMALVSCASHADVDPFRVPAETTTPYHEAAPAHDHIGGM*
Ga0137399_105742292	3300012203	Vadose Zone Soil	AMKKSIILVSALSVVVMALVSCASDSDVDPFRATGPTTPVYHEAAPAHHNIGGTPD*
Ga0137377_104672011	3300012211	Vadose Zone Soil	AMKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGVNL*
Ga0137370_104900081	3300012285	Vadose Zone Soil	IILVSALSVVVMALVSCASNSYDDPFRTRTEPTTPEYHEPAPAHNNIGGTPD*
Ga0137387_108432652	3300012349	Vadose Zone Soil	MKKSIILVSALSVVVMALVSCASDSDVDPFRVRTETTTPYHEAAPPHDQIGGVNL*
Ga0137358_105627681	3300012582	Vadose Zone Soil	NCPAASTTVPAMKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM*
Ga0137398_100438503	3300012683	Vadose Zone Soil	MKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAALPPDHISGM*
Ga0137359_113200311	3300012923	Vadose Zone Soil	IILVSALSVVVMALVSCASDSDVDPFRARTEPTTPDYHEPAPAHVSHITGQ*
Ga0137413_103422622	3300012924	Vadose Zone Soil	KKSIILVSALSVVVMALVSCASHSDVDPFRVPAETTTPYHEAAPAHDHIGGM*
Ga0137413_105233971	3300012924	Vadose Zone Soil	MKKSIILVSALSVVVMALVPCASHSDVDPFRVPAETTTPYHEAAPAHDHIGGM*
Ga0137413_116972252	3300012924	Vadose Zone Soil	PAMKKSIILVSALSVVVMALVSCASNSYDDPFRARTEPTTPEYHEPAPAHHNIGGTPD*
Ga0137416_113279751	3300012927	Vadose Zone Soil	MKKSIILVSALSVVVMALVSCASDSDVDPFRATGPTTPVYHEAAPAHHNIGGTPD*
Ga0126375_112504681	3300012948	Tropical Forest Soil	IILVSALSVVVMALVSCASDSDVDPYRARMDTTTPAYHEAAPPAHSHISGM*
Ga0164300_103447963	3300012951	Soil	MKKSIILVSALSVVVMALVSCASHSDVDPFRVPAETTTPYHEPAPAHDRIGGVPD*
Ga0164298_116027251	3300012955	Soil	PAMKKSIILVSALSVVVMALVSCASHSDVDPFRVPAETTTPYHEPAPAHDRIGGVPD*
Ga0126369_114508131	3300012971	Tropical Forest Soil	MKKSIIVLSVLSVVVMALVSCASNSDDPFRVRTDTTTPEYHEPAPAHHNIGGVPD*
Ga0164306_106226561	3300012988	Soil	RQFPAMKKSIILVSALSVVVMALVSCASHSDVDPFRVPAETTTPYHEPAPAHDRIGGVPD
Ga0164306_118925892	3300012988	Soil	MKKSIILVSALSVVVMALVSCASNSYEDPFRARTEPTTPEYHEPAPAHHNI
Ga0157372_129712783	3300013307	Corn Rhizosphere	AASTTVPAMKESIILVSAFSVVVMALVSCASDSDVDPMRVRADTTTPYHEAAPAHQSHISGM*
Ga0120125_11804301	3300014056	Permafrost	SVVVMALVSCASDSDVDPFRATAPTTPVYHEAAPAHSNIGGTPD*
Ga0134078_101445942	3300014157	Grasslands Soil	MKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTAPYHEPAPAHDQIGGVNL*
Ga0134085_105901762	3300015359	Grasslands Soil	MKKSIILVSALSVVVVALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGVNL*
Ga0132256_1029022701	3300015372	Arabidopsis Rhizosphere	MKKSIILVSALSGVVMVLVSCASDSDVDPARVRTETTPYHEPAPAHDQIVG
Ga0182033_119224171	3300016319	Soil	MKKSIILVSALSVVVMALVSCASDSNVDPYRANTEPTTPVYHEAAPAHTNIGGTPD
Ga0182032_103742252	3300016357	Soil	PAMKKSIILVSALSVVVMALVSCASNYDDPFRVNTEPTTPEYHEAAPAHVNIGGTPGY
Ga0182037_117764191	3300016404	Soil	ELPAASTTVSAMKKSIILVSAFSVVLMALVSCASDSDDPFRVHVGPTEPPPYHEAAPAHTNIGGTGD
Ga0182039_107590322	3300016422	Soil	ARRHQRQFLPMKKSIILVSALSVVVMALVSCASDSDVDPARARMDTTTPTYHEAAPAHSNIGGTPGF
Ga0187824_102977122	3300017927	Freshwater Sediment	CPAASTTVPAMKKSIILVSVLSLVVMALVSCASDSDVDPFRVHTDTTKPAAPPEAQPPPDHISGM
Ga0184608_100748862	3300018028	Groundwater Sediment	MKKSIILVSALSVLVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM
Ga0184608_102165372	3300018028	Groundwater Sediment	MKKSIILVSALSVVVMALVSCASDSNVDPFRVHTETTTPYHEPAPAHDQIGGMNL
Ga0184617_12776652	3300018066	Groundwater Sediment	MKKSIILVSALSVVVMALVSCASDSNVDPFRVHTETTTPYHEPAPAHDQIGG
Ga0066667_106517092	3300018433	Grasslands Soil	PAMKKSIILVSALSVVVMALVSCASNSYDDPFRARTQPTTPEYHEPAPAHHNIGGTPD
Ga0173482_102005712	3300019361	Soil	MKKSIILVSALSVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM
Ga0193713_10031225	3300019882	Soil	MKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGTNF
Ga0193727_10300921	3300019886	Soil	QRQFPAMKKSIILVSALSVVVMALVSCASDSNVDPFRVHTETTTPYHEPAPAHDQIGGMN
Ga0193727_10717602	3300019886	Soil	MKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKATPVYHEPAPPPPDHISGM
Ga0193711_10173192	3300019997	Soil	RQFPAMKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGTNF
Ga0193735_10453551	3300020006	Soil	MKKSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYHEPAPAHDQIGGVNL
Ga0193721_10643032	3300020018	Soil	MKKSIILVSALSVVVMALVSCASNSDVDPFRVNADKTTPVYHEPAPPPPDHISGM
Ga0179594_100883111	3300020170	Vadose Zone Soil	KSIILVSALSVVVMALVSCASDSNVDPFRVRTETTTPYQEPAPAHVSHITGE
Ga0247692_10280431	3300024279	Soil	PAASTTVPTMKKSIILVSALSVVVMALVSCASDSDVDPARVRTETTPYHEPAPAHDQIGGVNL
Ga0207697_100417631	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSIILVSALFVAVMALVSCANNSDVDPFRVRNDTTTPYHEPAPAHESHITGM
Ga0207697_103066732	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKESIILVSALSVVVMALVSCASDSDVDPMRVRADTTTPYHEAAPAHQSHI
Ga0207670_113338912	3300025936	Switchgrass Rhizosphere	SIILVSALSVVVMALVSCASDSDGDPNQVRVDRPPPAQEAAPPHVSHLTGE
Ga0207691_106184012	3300025940	Miscanthus Rhizosphere	MKKSIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE
Ga0207641_121519982	3300026088	Switchgrass Rhizosphere	NCPAGSTTVPAMKKSIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE
Ga0207675_1009008771	3300026118	Switchgrass Rhizosphere	TTVPAMKKSIILVSAFSIVVMALVSCASDSDVDPARVRADTTTPYREPAPAHQSHISGM
Ga0268266_105709361	3300028379	Switchgrass Rhizosphere	PAGSTTVPAMKKSIILVSALSLVVMALVSCASDSDGDPNQVRVDRPPPTQEAAPPHVSHLTGE
Ga0247822_107161592	3300028592	Soil	MKKSIILVSALSVVVMALVSCASDSDVDPNRVRFDTAPPTQEAAPAHVS
Ga0307280_103336532	3300028768	Soil	MKKSIILVSTLSVVVMALVSCASDSNVDPFRVNTEPTTPVYHEPAPAHSNIGGTPE
Ga0307282_101950863	3300028784	Soil	MKKSIILVSALSVVVMALVSCASDSDVDPFRATGPTTPVYHEAAPAHSN
Ga0307296_107953991	3300028819	Soil	PAMKKSIILVSALSVVVVALVSCASDSNVDPFRVHTETTTPYHEPAPAHDQIGGTNF
Ga0170820_141992351	3300031446	Forest Soil	VLVMGLVSCASDSNVDPFRVNTEKAPPPYQEPAPAHDNIGGVPDL
Ga0306917_113249791	3300031719	Soil	LNCPAASTTVPAMKKSIILVSALSVVVMALVSCASNYDDPFRVNTEPTTPAYHEAAPAHDNIGGTPGF
Ga0306919_106958322	3300031879	Soil	MKKSIILVSALSVVVMALVSCASNYDDPFRVNTEKTTPEYHEPAPAHDHIAGS
Ga0310912_106442901	3300031941	Soil	MRKSIILVSALSAVVMALVSCASKSDDPFRVNTEPATPEYHEAAPSHTHSD
Ga0310916_103540003	3300031942	Soil	MKKSIILVSALSVVVMALVSCASNYDDPFRVNTEPTTPAYHEAAPAHDNIGGTPGF
Ga0310910_105836282	3300031946	Soil	MKKSIILVSALSVVVMALVSCASNYDDPFRVNTEPTTPEYHEAAPAHRNIGGTPDY
Ga0310909_100844514	3300031947	Soil	MKKSIILVSALSVVVMALVSCASNYDDPFRVNTETTTPEYHEAAPAHVNIGGTPGY
Ga0310909_115875721	3300031947	Soil	MKKSIILVSALSVVLMALVSCASNYDDPFRVNTEPTTPAYHEAAPAHDNIGGTPGF
Ga0306926_104515633	3300031954	Soil	ALSVVVMALVSCASNYDDPFRVNTETTTPEYHEAAPAHVNIGGTPGY
Ga0306926_117148752	3300031954	Soil	MRKSIILVSALSAVVMALVSCASKSDDPFRVNTEPATPEYHEAAPSHTHSDQWG
Ga0306924_116669512	3300032076	Soil	MKKSIILVSALSVVVMALVSCASNYDDPFRVNTEPTTPEYHEAAPAHVNIGGTPGY
Ga0310810_113758461	3300033412	Soil	FPAMKKSIILVSALSVVMMALVSCASDSDVDPLRVRNDTTTRPAQEAAPAHESHITGM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences