Metagenome / Metatranscriptome Family F061486

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061486
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	62 residues
Representative Sequence	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG
Number of Associated Samples	100
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.08 %
% of genes near scaffold ends (potentially truncated)	28.24 %
% of genes from short scaffolds (< 2000 bps)	85.50 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.015 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (28.244 % of family members)
Environment Ontology (ENVO)	Unclassified (71.756 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (51.908 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00712	DNA_pol3_beta	23.66
PF02768	DNA_pol3_beta_3	11.45
PF02767	DNA_pol3_beta_2	5.34
PF07726	AAA_3	3.82
PF06868	DUF1257	2.29
PF05951	Peptidase_M15_2	0.76
PF13546	DDE_5	0.76
PF07728	AAA_5	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	40.46
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.02 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.91 %
Unclassified	root	N/A	41.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.05 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10091229	Not Available	756	Open in IMG/M
3300004091\|Ga0062387_100443346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300004635\|Ga0062388_102962404	Not Available	501	Open in IMG/M
3300005541\|Ga0070733_10337148	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300006055\|Ga0097691_1043999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1609	Open in IMG/M
3300009090\|Ga0099827_11616249	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009521\|Ga0116222_1204568	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300009524\|Ga0116225_1145654	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300009525\|Ga0116220_10529979	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009547\|Ga0116136_1016496	All Organisms → cellular organisms → Bacteria → Acidobacteria	2518	Open in IMG/M
3300009547\|Ga0116136_1107607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009548\|Ga0116107_1081612	Not Available	1002	Open in IMG/M
3300009549\|Ga0116137_1114186	Not Available	776	Open in IMG/M
3300009552\|Ga0116138_1073990	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300009616\|Ga0116111_1144458	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300009623\|Ga0116133_1031284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1316	Open in IMG/M
3300009629\|Ga0116119_1108593	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300009636\|Ga0116112_1226449	Not Available	517	Open in IMG/M
3300009637\|Ga0116118_1282442	Not Available	504	Open in IMG/M
3300009639\|Ga0116122_1014811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2885	Open in IMG/M
3300009639\|Ga0116122_1196461	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300009641\|Ga0116120_1152914	Not Available	743	Open in IMG/M
3300009645\|Ga0116106_1033489	All Organisms → cellular organisms → Bacteria → Acidobacteria	1757	Open in IMG/M
3300009672\|Ga0116215_1434429	Not Available	568	Open in IMG/M
3300009698\|Ga0116216_10848785	Not Available	547	Open in IMG/M
3300009839\|Ga0116223_10130014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1575	Open in IMG/M
3300010339\|Ga0074046_10068415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2324	Open in IMG/M
3300010343\|Ga0074044_10116750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1792	Open in IMG/M
3300010343\|Ga0074044_11076581	Not Available	527	Open in IMG/M
3300010379\|Ga0136449_100949666	Not Available	1392	Open in IMG/M
3300010379\|Ga0136449_101079015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300010379\|Ga0136449_103425359	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300010379\|Ga0136449_103904701	Not Available	559	Open in IMG/M
3300012206\|Ga0137380_11641523	Not Available	527	Open in IMG/M
3300014151\|Ga0181539_1036026	All Organisms → cellular organisms → Bacteria → Acidobacteria	2479	Open in IMG/M
3300014151\|Ga0181539_1097028	Not Available	1249	Open in IMG/M
3300014153\|Ga0181527_1047509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2338	Open in IMG/M
3300014155\|Ga0181524_10168741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300014155\|Ga0181524_10262226	Not Available	806	Open in IMG/M
3300014156\|Ga0181518_10305494	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300014161\|Ga0181529_10041942	All Organisms → cellular organisms → Bacteria	3325	Open in IMG/M
3300014162\|Ga0181538_10392208	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300014199\|Ga0181535_10092130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1965	Open in IMG/M
3300014200\|Ga0181526_10620391	Not Available	683	Open in IMG/M
3300014200\|Ga0181526_10901274	Not Available	556	Open in IMG/M
3300014201\|Ga0181537_10922712	Not Available	591	Open in IMG/M
3300014490\|Ga0182010_10022000	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300014491\|Ga0182014_10169572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300014491\|Ga0182014_10204166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300014492\|Ga0182013_10085221	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300014493\|Ga0182016_10540247	Not Available	669	Open in IMG/M
3300014495\|Ga0182015_10501693	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300014496\|Ga0182011_10177857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1457	Open in IMG/M
3300014496\|Ga0182011_10561665	Not Available	729	Open in IMG/M
3300014498\|Ga0182019_10062273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2190	Open in IMG/M
3300014501\|Ga0182024_11041136	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300014502\|Ga0182021_11465346	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300014638\|Ga0181536_10142528	Not Available	1274	Open in IMG/M
3300014654\|Ga0181525_10293615	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300014658\|Ga0181519_10067454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2351	Open in IMG/M
3300014839\|Ga0182027_11390658	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300014839\|Ga0182027_11463482	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300016750\|Ga0181505_11034986	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300017925\|Ga0187856_1152153	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300017925\|Ga0187856_1338028	Not Available	511	Open in IMG/M
3300017929\|Ga0187849_1151261	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300017929\|Ga0187849_1353570	Not Available	542	Open in IMG/M
3300017931\|Ga0187877_1114783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300017935\|Ga0187848_10115473	Not Available	1209	Open in IMG/M
3300017935\|Ga0187848_10151746	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300017938\|Ga0187854_10172119	All Organisms → cellular organisms → Bacteria → Acidobacteria	971	Open in IMG/M
3300017940\|Ga0187853_10146857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300017941\|Ga0187850_10036610	All Organisms → cellular organisms → Bacteria → Acidobacteria	2630	Open in IMG/M
3300017943\|Ga0187819_10773195	Not Available	540	Open in IMG/M
3300017972\|Ga0187781_10583216	Not Available	805	Open in IMG/M
3300017988\|Ga0181520_10152124	All Organisms → cellular organisms → Bacteria → Acidobacteria	1881	Open in IMG/M
3300017988\|Ga0181520_10419427	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300017996\|Ga0187891_1118782	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300018003\|Ga0187876_1285682	Not Available	529	Open in IMG/M
3300018008\|Ga0187888_1072339	Not Available	1521	Open in IMG/M
3300018008\|Ga0187888_1096752	All Organisms → cellular organisms → Bacteria → Acidobacteria	1263	Open in IMG/M
3300018009\|Ga0187884_10059423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1757	Open in IMG/M
3300018009\|Ga0187884_10260181	Not Available	705	Open in IMG/M
3300018015\|Ga0187866_1113173	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300018016\|Ga0187880_1270619	Not Available	742	Open in IMG/M
3300018020\|Ga0187861_10360806	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300018021\|Ga0187882_1288106	Not Available	631	Open in IMG/M
3300018024\|Ga0187881_10189953	Not Available	878	Open in IMG/M
3300018026\|Ga0187857_10024095	All Organisms → cellular organisms → Bacteria → Acidobacteria	3359	Open in IMG/M
3300018033\|Ga0187867_10650395	Not Available	575	Open in IMG/M
3300018033\|Ga0187867_10801744	Not Available	511	Open in IMG/M
3300018034\|Ga0187863_10156440	All Organisms → cellular organisms → Bacteria → Acidobacteria	1272	Open in IMG/M
3300018034\|Ga0187863_10540076	Not Available	654	Open in IMG/M
3300018035\|Ga0187875_10427806	Not Available	706	Open in IMG/M
3300018037\|Ga0187883_10162876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300018038\|Ga0187855_10198561	Not Available	1185	Open in IMG/M
3300018044\|Ga0187890_10022862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3838	Open in IMG/M
3300018046\|Ga0187851_10118304	Not Available	1630	Open in IMG/M
3300018046\|Ga0187851_10342094	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300018047\|Ga0187859_10316128	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300018057\|Ga0187858_10098960	All Organisms → cellular organisms → Bacteria → Acidobacteria	1994	Open in IMG/M
3300018062\|Ga0187784_10327955	Not Available	1242	Open in IMG/M
3300018088\|Ga0187771_11335886	Not Available	608	Open in IMG/M
3300019082\|Ga0187852_1072811	Not Available	1554	Open in IMG/M
3300019787\|Ga0182031_1016080	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300023088\|Ga0224555_1062210	Not Available	1303	Open in IMG/M
3300025581\|Ga0208355_1082669	Not Available	708	Open in IMG/M
3300025619\|Ga0207926_1159118	Not Available	503	Open in IMG/M
3300027783\|Ga0209448_10179805	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300027825\|Ga0209039_10004494	All Organisms → cellular organisms → Bacteria	10162	Open in IMG/M
3300027854\|Ga0209517_10138863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1571	Open in IMG/M
3300027905\|Ga0209415_10142045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2445	Open in IMG/M
3300029911\|Ga0311361_10772618	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300029922\|Ga0311363_10366503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1559	Open in IMG/M
3300031708\|Ga0310686_107106984	Not Available	587	Open in IMG/M
3300032160\|Ga0311301_12634114	Not Available	556	Open in IMG/M
3300032160\|Ga0311301_12824907	Not Available	529	Open in IMG/M
3300032892\|Ga0335081_11659041	Not Available	699	Open in IMG/M
3300032892\|Ga0335081_12271199	Not Available	569	Open in IMG/M
3300033402\|Ga0326728_10022670	All Organisms → cellular organisms → Bacteria	11617	Open in IMG/M
3300033402\|Ga0326728_10297692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1476	Open in IMG/M
3300033402\|Ga0326728_10556232	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300033402\|Ga0326728_10697641	Not Available	763	Open in IMG/M
3300033405\|Ga0326727_10187325	Not Available	2308	Open in IMG/M
3300033405\|Ga0326727_10201125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2179	Open in IMG/M
3300033405\|Ga0326727_10741058	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300033977\|Ga0314861_0303821	Not Available	719	Open in IMG/M
3300033977\|Ga0314861_0371903	Not Available	631	Open in IMG/M
3300034091\|Ga0326724_0122931	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300034091\|Ga0326724_0669010	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	56.49%
Terrestrial	Environmental → Terrestrial	43.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	56.49%
Soil	Environmental → Terrestrial → Soil	34.35%
Peat	Environmental → Terrestrial → Peat	9.16%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	56.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.16%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	45.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	28.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	12.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.87%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.29%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100912292	3300003218	Bog Forest Soil	MQKELFEKYYRVLGILLLAPINGWGAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG*
Ga0062387_1004433461	3300004091	Bog Forest Soil	GTFMQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHSIMALANGAMAVVTVPGVIFFWHPGRRG*
Ga0062388_1029624042	3300004635	Bog Forest Soil	MQKELFEKYFQVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVPGVILFWH
Ga0070733_103371482	3300005541	Surface Soil	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0097691_10439991	3300006055	Arctic Peat Soil	MQKELLEKYYRVLRILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0099827_116162492	3300009090	Vadose Zone Soil	MQKDLFEKVHQVLGILLLILAPINGWMAYTLYARHPIMASANGSLAVVIVAGVAL
Ga0116222_12045682	3300009521	Peatlands Soil	MQKELFEKHYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0116225_11456542	3300009524	Peatlands Soil	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPKHPMMALANGAMAVVTVPGVILFWHPGRRG*
Ga0116220_105299791	3300009525	Peatlands Soil	PKKSVRKGTFMQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0116136_10164964	3300009547	Peatland	MQKHSFEKLDQVFGILLLVLAPITGWVAYTLYRKHPIMASANAAVGVLIVPCVILFWRAGRRQ*
Ga0116136_11076071	3300009547	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALHPEHPILALANGAMAVVTVLGVILFWHPGRRG*
Ga0116107_10816122	3300009548	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMTLANGAMAVAIVLGVILFWHPGRRG*
Ga0116137_11141861	3300009549	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0116138_10739901	3300009552	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG*
Ga0116111_11444582	3300009616	Peatland	RKGTFMQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMTLANGAMAVAIVLGVILFWHPGRRG*
Ga0116133_10312842	3300009623	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPARRG*
Ga0116119_11085932	3300009629	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFRHPGRRG*
Ga0116112_12264491	3300009636	Peatland	HSFEKLDQVFGILLLVLAPITGWVAYTLYRKHPIMASANAAVGVLIVPCVILFWRAGRRQ
Ga0116118_12824422	3300009637	Peatland	MQKHLFEKLHQVSGILLLVLAPINGWMAYTLYRQHPIMASANAAAAVVIVPGVIFFWRAGRRG*
Ga0116122_10148111	3300009639	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYAPYSEHPIMALANGAMAVAIVPGVILFWHPGRRG
Ga0116122_11964611	3300009639	Peatland	RMLGILLLVLAPINDGATYALYPEHPMMALANGAMAVAIVLGVILFWHPGRRG*
Ga0116120_11529141	3300009641	Peatland	MQKELFEKYYRVLGILLLVLAPINGGAAHALYPEHPIMALANDAMAVAIVLGVILFWHPGRRG*
Ga0116106_10334892	3300009645	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0116215_14344291	3300009672	Peatlands Soil	MQKELLEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0116216_108487852	3300009698	Peatlands Soil	MQKELFEKYYRVSGILLLVLAPINGWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0116223_101300141	3300009839	Peatlands Soil	VLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0074046_100684151	3300010339	Bog Forest Soil	SVGLTSAEKICAETFMQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHSIMALANGAMAVVTVPGVIFFWHPGRRG*
Ga0074044_101167502	3300010343	Bog Forest Soil	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAIAVVTVPGVILFWHPGRRG*
Ga0074044_110765811	3300010343	Bog Forest Soil	LFEKYFQVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG*
Ga0136449_1009496661	3300010379	Peatlands Soil	MQKHSFEKVHQVFGILLLVLAPINGWVAYTLYRQHPIMASANAAVAVVIVPCVILFWRAGRRQ*
Ga0136449_1010790152	3300010379	Peatlands Soil	MQKELFEKYYRVVGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHP
Ga0136449_1034253592	3300010379	Peatlands Soil	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0136449_1039047011	3300010379	Peatlands Soil	MQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0137380_116415231	3300012206	Vadose Zone Soil	MQKDLFEKVHQVLGILLLILAPINGWMAYTLYARHPIMASANGALAVVIVAGVTLFWRSGRRS*
Ga0181539_10360264	3300014151	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPKHPMMALANGAMAVAIVLGVILFWHPGRRG*
Ga0181539_10970282	3300014151	Bog	MQKDLFEKVHQVLGILLLVLAPINGWMAYTLYAQHPIMASANGALAVVIVSGVILFWRAGRRQ*
Ga0181527_10475091	3300014153	Bog	MQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHLGRRG*
Ga0181524_101687412	3300014155	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPKHPMMALANGAMAVAIVLGVILFWHLGRRG*
Ga0181524_102622261	3300014155	Bog	MQKHLFEKLPQVSGILLLVLAPINGWMAYTLYAQHPNMASANAAAAVVIVLGVIFFWRAGRRG*
Ga0181518_103054941	3300014156	Bog	MQKELLEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0181529_100419423	3300014161	Bog	MQEHLFEKVDQVLGILLLVLAPINGWMAYTLYAQHPIMASANGALAVVIVSGVILFWRAGRRG*
Ga0181538_103922082	3300014162	Bog	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVAIVLGV
Ga0181535_100921301	3300014199	Bog	KELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG*
Ga0181526_106203911	3300014200	Bog	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAIAVAIVPGVILFWHPGRRG*
Ga0181526_109012741	3300014200	Bog	MQKHLFEKLHQVSGILLLVLASINGWMAYTLYAQHPIMASANAAAVVVIV
Ga0181537_109227122	3300014201	Bog	MQKELLEKYYQVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG*
Ga0182010_100220005	3300014490	Fen	MQKELFEKYYRVLGILLLVLAPINGWAAYALYREHPIMALANGAMAVVTVLGVILFWHPGRRG*
Ga0182014_101695722	3300014491	Bog	MQKELLEKYYRVLGILLLVLAPINGGAAYALYREHPIMALANGAMAVVTVPGVILFWHPGRRG*
Ga0182014_102041662	3300014491	Bog	MQKELFEKYYRMLGILLLVLAPINGGAAYALYPEHPMMALANGAMAVAIVLTVILFWHPGRRG*
Ga0182013_100852211	3300014492	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVEIVLGVILFWHTGRRG*
Ga0182016_105402471	3300014493	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVIPFWHPGRHG*
Ga0182015_105016931	3300014495	Palsa	MQKELLEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG*
Ga0182011_101778571	3300014496	Fen	MQKEFFEKYYRVLGILLLVLAPINGWAAYALYREHPIMALANGAMAVVTVLGVILFWHPGRRG*
Ga0182011_105616652	3300014496	Fen	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHTGRRG*
Ga0182019_100622733	3300014498	Fen	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG*
Ga0182024_110411361	3300014501	Permafrost	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHTGRRG*
Ga0182021_114653462	3300014502	Fen	MQKHLFEKLHQALGILLLVLAPIDGWMAYTRYAQHPIMASANATMAVAIVAAVVLFWRSGKRG*
Ga0181536_101425282	3300014638	Bog	LFEKVHQILGILLLILASINGWMAYTLYAHHPIMASANGALAVVIVAGVVLFWRSGRRG*
Ga0181525_102936152	3300014654	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVPGVILFWHPGRRG*
Ga0181519_100674541	3300014658	Bog	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALAKGAMAVVTVPGVMLFWHPGRRG*
Ga0182027_113906581	3300014839	Fen	MQNELFEKYYQVLGILLLVLAPINGWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG*
Ga0182027_114634821	3300014839	Fen	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPMMALANGAMAVAIVLTV
Ga0181505_110349861	3300016750	Peatland	KLFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG
Ga0187856_11521531	3300017925	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMTLANGAMAVAIVLGVILFWHPGRRG
Ga0187856_13380281	3300017925	Peatland	MQKHLFEKLHQVSGILLLVLAPINGWMAYKLYCQQPNKGAAKAAGAVVIVTGGN
Ga0187849_11512612	3300017929	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMTLANGAMAVVTVPGVILFWHPGRRG
Ga0187849_13535701	3300017929	Peatland	MQKHSFEKLDQVFGILLLVLAPITGWVAYTLYRKHPIMASANAAVGVLIVPCVILFWRAGRRQ
Ga0187877_11147832	3300017931	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYREHPIMALANGAMAVVTVPGVILFWHPGRRG
Ga0187848_101154731	3300017935	Peatland	MQKHLFEKLHQVSGILLLVLAPINGWMAYTLYRQHPIMASANAAAAVVIVPGVIFFWRAGRRG
Ga0187848_101517462	3300017935	Peatland	MQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG
Ga0187854_101721192	3300017938	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG
Ga0187853_101468572	3300017940	Peatland	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVPGVILFWHPGRRG
Ga0187850_100366102	3300017941	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG
Ga0187819_107731952	3300017943	Freshwater Sediment	GAFMQKHLFEKVHQILGILLLILAPINGWMAYTLYAQHPIMASANGALAVVIVAGVAAFWRSGRRG
Ga0187781_105832163	3300017972	Tropical Peatland	RTPDRAAQKGTAMQKDLFEKHHRALGIVLLILVPVNAWMAYTLHPQHPLMASASAAMAVVIVAGVVLFWRAGRRR
Ga0181520_101521241	3300017988	Bog	AAKKSVRKGNFMQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG
Ga0181520_104194272	3300017988	Bog	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG
Ga0187891_11187822	3300017996	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPDHSIMALANGAMAVVTVPGVI
Ga0187876_12856821	3300018003	Peatland	KDLFEKVHQVLGILLLVLAPINGWMAYTLYAQHPIMASANGALAVVIVSGVILFWRAGRR
Ga0187888_10723393	3300018008	Peatland	MQKHLFEKLHQVSGILLLVLAPINGWMAYTLYHQHPIMASANAAAAVVIVPGVIFFWRAGRRG
Ga0187888_10967521	3300018008	Peatland	RKGNFMQKELFGKYYRVLGILLLVLAPINAWAAYALYPEHPLLALANGAMAVVTVPGVILFWHPGRRG
Ga0187884_100594232	3300018009	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVAIVLGVILFWHPGRRG
Ga0187884_102601812	3300018009	Peatland	MQKDLFEKVHQVLGILLLVLAPINGWMAYTLYAQHPIMASANGALAVVIVSGVILFWRAGRRQ
Ga0187866_11131732	3300018015	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG
Ga0187880_12706191	3300018016	Peatland	MQKHLFEKLHQVLGIFLLVLASINGWMAYTLYAQHPNMASANAAAAVVIVLGVIF
Ga0187861_103608061	3300018020	Peatland	KGIVRKVLPVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRR
Ga0187882_12881061	3300018021	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPKHPMMALANGAMAVAIVLGVILFWHPGRRG
Ga0187881_101899531	3300018024	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPKHPMMALANGAMAVAIVLGVILFWHPGRRG
Ga0187857_100240953	3300018026	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPIMTLANGAMAVAIVLGVILFWHPGRRG
Ga0187867_106503951	3300018033	Peatland	MQKHLFEKLHQVLGILLLVLASINGWMAYTLYAQHPIMASANAAAVVVIVPGVIFFWRAGRRG
Ga0187867_108017441	3300018033	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVPGVILFWHPGRRG
Ga0187863_101564402	3300018034	Peatland	FMQKELLEKYYQVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG
Ga0187863_105400762	3300018034	Peatland	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHP
Ga0187875_104278062	3300018035	Peatland	MQKELSEKYYRVLRMLLLVLAPINGGAAYALYPEHPIMTLANGAMAMAIVLGVMLFWHPGRRR
Ga0187883_101628762	3300018037	Peatland	RKGTFMQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG
Ga0187855_101985613	3300018038	Peatland	MQKHLFEKLHQVSGILLLVLASINGWMAYTLYAQHPIMASANAAAVVVVIVPGVIFFWRAGRRG
Ga0187890_100228626	3300018044	Peatland	MQKELLEKYYRVLGILLLVLAPINGWAAYALYREHPIMALANGAMAVVTVPGVILFWHPGRRG
Ga0187890_108827511	3300018044	Peatland	MLLLVLAPINGGAAYALYPEHPIMTLANAAMAVAIVLGVMLFWHPGRRR
Ga0187851_101183041	3300018046	Peatland	MQKHLFEKLHQVSGILLLVLASINGWMAYTLYAQHPIMASANAAAVVVIVPGVIFFWRAGRRG
Ga0187851_103420942	3300018046	Peatland	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRRG
Ga0187859_103161281	3300018047	Peatland	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPILALANGAMAVAIVLGVILFWHPGRHG
Ga0187858_100989603	3300018057	Peatland	LGILLLVLAPINGGAAYALYPEHPIMTLANGAMAVAIVLGVILFWHPGRRG
Ga0187784_103279553	3300018062	Tropical Peatland	MSAQNGTFMQKDLFERDHRALGIMLVILAPVNAWMAYTLYPQHPLMASASAAMAVVIVAGVVLFWRAGRRR
Ga0187771_113358862	3300018088	Tropical Peatland	MQKDLFERDHRALGIMLVILAPVNAWMAYTLYPQHPIMASASVTMAVVIVAGVVLFWRSGRRR
Ga0187852_10728111	3300019082	Peatland	MQKHLFEKLHQVSGILLLVLAPINGWMAYTLYAQHPIMASANAAAVVVIVPGVIFFWRAGRRG
Ga0182031_10160801	3300019787	Bog	MQKELFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWH
Ga0224555_10622102	3300023088	Soil	MQKELFEKYYRMLGILLLVLAPINGGAAYALYPEHPMMALANGAMAVAIVLTVILFWHPGRRG
Ga0208355_10826692	3300025581	Arctic Peat Soil	MQKELLEKYYRVLRILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG
Ga0207926_11591181	3300025619	Arctic Peat Soil	MQKELLEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG
Ga0209448_101798052	3300027783	Bog Forest Soil	CAEGNLHAKGIVRKVLRVLGILLLVLAPINGWAAYALYPEHSIMALANGAMAVVTVPGVIFFWHPGRRG
Ga0209039_1000449411	3300027825	Bog Forest Soil	MQKELFEKYYRVLGILLLAPINGWGAYALYPEHPIMALANGAMAVAIVPGVILFWHPGRR
Ga0209517_101388633	3300027854	Peatlands Soil	MQKELFEKYYRVSGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVIVPGVILFWHPGRRG
Ga0209415_101420454	3300027905	Peatlands Soil	MQKELFEKYYQVLGILLLVLAPINGWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG
Ga0311361_107726182	3300029911	Bog	MQKELFEKYYRVLEILLLVPAPINGWAAYALYPEHPIMTLANGAMAVVTVPGVILFWHPGRRG
Ga0311363_103665031	3300029922	Fen	MQKELFEKYYRVLEILLLVPAPINGWAAYALYPEHPIMTLANGAMAVVTVPGVILFWHPG
Ga0310686_1071069842	3300031708	Soil	MQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRHG
Ga0311301_126341141	3300032160	Peatlands Soil	MQKELFEKYYRVLGILLLVLAPINGGAAYALYPEHPIMALANGAMAVAIVLGVILFWHPGRRG
Ga0311301_128249071	3300032160	Peatlands Soil	MQKELFEKYYRVVGILLLVLAPINAWAAYALYPEHPILALANGAMAVVTVPGVILFWHPGRRG
Ga0335081_116590411	3300032892	Soil	MQKELFEKYHRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVAIVL
Ga0335081_122711991	3300032892	Soil	MQKHLFEKVHQILGILLLILAPINGWMAYTLYAQHPFMASANSAVAVVTVPGVILFWRAGRHQ
Ga0326728_100226702	3300033402	Peat Soil	MQKELFEKYYRVLGIPLLVLAPINRGAAYALCPEHPIMALANGAMAAAIVLAVILFWHPGRRG
Ga0326728_102976923	3300033402	Peat Soil	MQKDLFERDHRALGIMLVILAPVNAWMAYTLYPQHPLMASASAGMAVVIVAGVVLFWRAGRRR
Ga0326728_105562322	3300033402	Peat Soil	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPIMALANGAMAVVTVPGVMLFWHPGRRG
Ga0326728_106976412	3300033402	Peat Soil	MQKHLFEKLHQVSGILLLVLASINGWMAYTLYAQHPIMASANAAAAVIVPGVIFFWRAGRRG
Ga0326727_101873253	3300033405	Peat Soil	MQKHLFEKLHQVLGILLLVLAPINGWMAYTLYAQHPIMASANVAVAVVTVPGVILFWLAGRRQ
Ga0326727_102011252	3300033405	Peat Soil	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPIMALANGAMAVVTVPGVILFWHPGRRG
Ga0326727_107410581	3300033405	Peat Soil	LFEKYYRVLGILLLVLAPINGWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG
Ga0314861_0303821_464_655	3300033977	Peatland	MQKDLFEKHDRALGIVLLILVPVNAWMAYALYPQHPIMASASATTAVVIVAGVVLFWRSGRRR
Ga0314861_0371903_445_630	3300033977	Peatland	MQKDLFERDHRALGIMLVILAPVNAWMAFTLYPQHPLMASASAAMAVVIVAGVVLFWRAGRR
Ga0326724_0122931_956_1147	3300034091	Peat Soil	MQKELFEKYYRVLGILLLVLAPINAWAAYALYPEHPIMALANGAMAVVTVLGVILFWHPGRRG
Ga0326724_0669010_355_507	3300034091	Peat Soil	MQKELFEKYYRVLGILLLILAPINGWAAYALYPEHPIMALANGAMAVAIVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061486

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences