Metagenome Family F061444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061444
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	SSMKIKTAGPATIPAGGKVKSVHEAKAEFRIEFEDGSSATFCLANPGSSVAVRDKNNAVEYLG
Number of Associated Samples	55
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.75 %
% of genes near scaffold ends (potentially truncated)	57.25 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.145 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.511 % of family members)
Environment Ontology (ENVO)	Unclassified (63.359 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.519 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.78% Coil/Unstructured: 80.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13676	TIR_2	3.05
PF06516	NUP	1.53
PF12728	HTH_17	1.53
PF00484	Pro_CA	1.53
PF02770	Acyl-CoA_dh_M	0.76
PF13411	MerR_1	0.76
PF00216	Bac_DNA_binding	0.76
PF01047	MarR	0.76
PF07690	MFS_1	0.76
PF13358	DDE_3	0.76
PF04444	Dioxygenase_N	0.76
PF02735	Ku	0.76
PF13541	ChlI	0.76
PF03098	An_peroxidase	0.76
PF01471	PG_binding_1	0.76
PF03737	RraA-like	0.76
PF11149	DUF2924	0.76
PF00383	dCMP_cyt_deam_1	0.76
PF05977	MFS_3	0.76
PF08281	Sigma70_r4_2	0.76
PF02737	3HCDH_N	0.76
PF05708	Peptidase_C92	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.53
COG5042	Purine nucleoside permease	Nucleotide transport and metabolism [F]	1.53
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.76
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.76
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.76
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.76
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.76
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.76
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.76
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.76
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
All Organisms	root	All Organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
cellular organisms	root	All Organisms → cellular organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Methylacidiphilae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae	6.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Methylacidiphilales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales	6.87 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Methylacidiphilaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae	6.87 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.76 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Methylacidiphilum	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum	6.87 %
Rosistilla	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rosistilla	0.76 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Methylacidiphilum kamchatkense	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	6.87 %
Rosistilla carotiformis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rosistilla → Rosistilla carotiformis	0.76 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100315342	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300005332\|Ga0066388_104679563	Not Available	696	Open in IMG/M
3300005437\|Ga0070710_10404097	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005437\|Ga0070710_11361729	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005471\|Ga0070698_101935656	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_102972929	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005764\|Ga0066903_104376527	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005764\|Ga0066903_107119351	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005764\|Ga0066903_107601149	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005764\|Ga0066903_108382344	Not Available	528	Open in IMG/M
3300009792\|Ga0126374_10423725	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010043\|Ga0126380_11400548	Not Available	614	Open in IMG/M
3300010043\|Ga0126380_11860640	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_11328047	Not Available	785	Open in IMG/M
3300010048\|Ga0126373_12590032	Not Available	565	Open in IMG/M
3300010048\|Ga0126373_13050363	Not Available	522	Open in IMG/M
3300010359\|Ga0126376_11997116	Not Available	622	Open in IMG/M
3300010359\|Ga0126376_12282194	Not Available	587	Open in IMG/M
3300010359\|Ga0126376_12344265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	580	Open in IMG/M
3300010361\|Ga0126378_10618909	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300010366\|Ga0126379_10547825	Not Available	1236	Open in IMG/M
3300010366\|Ga0126379_10919694	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300010366\|Ga0126379_11843794	Not Available	708	Open in IMG/M
3300010376\|Ga0126381_100205296	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300010376\|Ga0126381_100544617	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300010376\|Ga0126381_100810502	Not Available	1344	Open in IMG/M
3300010376\|Ga0126381_100831935	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300010376\|Ga0126381_100906606	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300010376\|Ga0126381_101976130	Not Available	841	Open in IMG/M
3300010398\|Ga0126383_10187325	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300010398\|Ga0126383_11765198	Not Available	707	Open in IMG/M
3300010398\|Ga0126383_11990543	Not Available	669	Open in IMG/M
3300010398\|Ga0126383_12328012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	621	Open in IMG/M
3300010398\|Ga0126383_12947688	Not Available	556	Open in IMG/M
3300012958\|Ga0164299_10788742	Not Available	676	Open in IMG/M
3300012971\|Ga0126369_11643595	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300012971\|Ga0126369_11700009	Not Available	720	Open in IMG/M
3300012984\|Ga0164309_11637619	Not Available	552	Open in IMG/M
3300016270\|Ga0182036_10068673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2301	Open in IMG/M
3300016270\|Ga0182036_10086277	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300016270\|Ga0182036_10368766	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300016270\|Ga0182036_10479548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	982	Open in IMG/M
3300016270\|Ga0182036_11605623	Not Available	548	Open in IMG/M
3300016294\|Ga0182041_10742199	Not Available	873	Open in IMG/M
3300016294\|Ga0182041_12258442	Not Available	509	Open in IMG/M
3300016341\|Ga0182035_10211108	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300016341\|Ga0182035_10377720	Not Available	1185	Open in IMG/M
3300016341\|Ga0182035_12047884	Not Available	520	Open in IMG/M
3300016357\|Ga0182032_10329746	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300016357\|Ga0182032_11784254	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300016371\|Ga0182034_11798164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	540	Open in IMG/M
3300016371\|Ga0182034_11826522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	536	Open in IMG/M
3300016371\|Ga0182034_11856681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	531	Open in IMG/M
3300016387\|Ga0182040_10525116	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300016387\|Ga0182040_10558112	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300016387\|Ga0182040_10591240	Not Available	898	Open in IMG/M
3300016387\|Ga0182040_11223984	Not Available	632	Open in IMG/M
3300016387\|Ga0182040_11393413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300016387\|Ga0182040_11525289	Not Available	568	Open in IMG/M
3300016404\|Ga0182037_10429489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300016404\|Ga0182037_10685072	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300016404\|Ga0182037_10747134	Not Available	840	Open in IMG/M
3300016404\|Ga0182037_11410970	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300016404\|Ga0182037_11624027	Not Available	575	Open in IMG/M
3300016404\|Ga0182037_11852386	Not Available	540	Open in IMG/M
3300016404\|Ga0182037_11889872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	534	Open in IMG/M
3300016422\|Ga0182039_11295755	Not Available	660	Open in IMG/M
3300016422\|Ga0182039_11666859	Not Available	583	Open in IMG/M
3300016445\|Ga0182038_11493349	Not Available	607	Open in IMG/M
3300021361\|Ga0213872_10023980	Not Available	2806	Open in IMG/M
3300021439\|Ga0213879_10002555	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300021444\|Ga0213878_10227187	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300021444\|Ga0213878_10299087	Not Available	690	Open in IMG/M
3300021560\|Ga0126371_10630721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1220	Open in IMG/M
3300021560\|Ga0126371_12483310	Not Available	627	Open in IMG/M
3300025916\|Ga0207663_10667952	Not Available	821	Open in IMG/M
3300027326\|Ga0209731_1082804	Not Available	503	Open in IMG/M
3300031544\|Ga0318534_10527398	Not Available	674	Open in IMG/M
3300031545\|Ga0318541_10367307	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031572\|Ga0318515_10423098	Not Available	713	Open in IMG/M
3300031679\|Ga0318561_10352907	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031681\|Ga0318572_10707127	Not Available	600	Open in IMG/M
3300031715\|Ga0307476_10492786	Not Available	908	Open in IMG/M
3300031718\|Ga0307474_10561962	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031724\|Ga0318500_10425935	Not Available	662	Open in IMG/M
3300031781\|Ga0318547_10673566	Not Available	643	Open in IMG/M
3300031833\|Ga0310917_10113948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1754	Open in IMG/M
3300031833\|Ga0310917_10279430	Not Available	1127	Open in IMG/M
3300031833\|Ga0310917_10325129	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031859\|Ga0318527_10452150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300031879\|Ga0306919_10103636	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300031879\|Ga0306919_10695099	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rosistilla → Rosistilla carotiformis	783	Open in IMG/M
3300031890\|Ga0306925_10393332	Not Available	1486	Open in IMG/M
3300031890\|Ga0306925_10889991	Not Available	917	Open in IMG/M
3300031890\|Ga0306925_11761418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	595	Open in IMG/M
3300031890\|Ga0306925_11800595	Not Available	586	Open in IMG/M
3300031896\|Ga0318551_10753159	Not Available	565	Open in IMG/M
3300031897\|Ga0318520_10588341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	691	Open in IMG/M
3300031910\|Ga0306923_10054162	All Organisms → cellular organisms → Bacteria	4436	Open in IMG/M
3300031910\|Ga0306923_10431739	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300031910\|Ga0306923_10500344	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300031910\|Ga0306923_11794270	Not Available	630	Open in IMG/M
3300031910\|Ga0306923_12442331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	517	Open in IMG/M
3300031912\|Ga0306921_12676132	Not Available	513	Open in IMG/M
3300031941\|Ga0310912_10394692	Not Available	1077	Open in IMG/M
3300031941\|Ga0310912_10909197	Not Available	677	Open in IMG/M
3300031942\|Ga0310916_10212419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300031942\|Ga0310916_10362239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1232	Open in IMG/M
3300031942\|Ga0310916_10598477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300031942\|Ga0310916_10601274	Not Available	935	Open in IMG/M
3300031942\|Ga0310916_10752741	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300031946\|Ga0310910_11005601	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031954\|Ga0306926_10470456	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300031954\|Ga0306926_10632616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1304	Open in IMG/M
3300031954\|Ga0306926_12294671	Not Available	598	Open in IMG/M
3300031954\|Ga0306926_12712431	Not Available	538	Open in IMG/M
3300032001\|Ga0306922_10674345	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300032001\|Ga0306922_11382460	Not Available	708	Open in IMG/M
3300032001\|Ga0306922_12349997	Not Available	510	Open in IMG/M
3300032076\|Ga0306924_11307821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	778	Open in IMG/M
3300032261\|Ga0306920_101869285	Not Available	845	Open in IMG/M
3300032261\|Ga0306920_102372706	Not Available	733	Open in IMG/M
3300032261\|Ga0306920_103217152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Methylacidiphilae → Methylacidiphilales → Methylacidiphilaceae → Methylacidiphilum → Methylacidiphilum kamchatkense	611	Open in IMG/M
3300032261\|Ga0306920_104220269	Not Available	518	Open in IMG/M
3300033289\|Ga0310914_10007603	All Organisms → cellular organisms → Bacteria	7850	Open in IMG/M
3300033289\|Ga0310914_10089854	Not Available	2621	Open in IMG/M
3300033289\|Ga0310914_10280388	Not Available	1501	Open in IMG/M
3300033289\|Ga0310914_11463834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.24%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.05%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1003153424	3300005332	Tropical Forest Soil	MKIKTTRAGAASLGSKVKSVHEAQADFRIEFEDGSNVTFCLANPGSSVAVRDKNNAVECLG*
Ga0066388_1046795632	3300005332	Tropical Forest Soil	MKIKTAGAAAVSPGNKVKSVHKAKADFRTEFEDGLSATFCLANPGSSVAVRDKIPFRLVALWV*
Ga0070710_104040971	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTIEPGSVLVLFDDESSIKIKTAGTAAVSPGSKVKSVHEAKAHFKIEFEDGSSATFCLADPGSPVAVRDKNNAVEYLG*
Ga0070710_113617291	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SSMKIKTAGPATIPAGGKVKSVHEAKAEFRIEFEDGSSATFCLANPGSSVAVRDKNNAVEYLG*
Ga0070698_1019356561	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKTVGAPARVSPGGKVKSVHEAKAEFKIGFEDGSSTTFCLDNPGSSVAVRDK
Ga0066903_1029729291	3300005764	Tropical Forest Soil	FDDQSSMKIKTAGAAAVSPGSKVKSVHEAKADFKIEFEDGSSATFSLANPGSSVTVREKNNAVEYLG*
Ga0066903_1043765271	3300005764	Tropical Forest Soil	LVLFDDQSNMKIKTVGPATIAPDGKVKSVHEAKAEFKIEFEDGSGATLCLADPGSSVAVRDKNNAVEYLG*
Ga0066903_1071193512	3300005764	Tropical Forest Soil	MKIKTAKGATILPGAKVKSVYEARGDFKIEFEDGSSSTFCLAEPGSSVAVRDKHNAVEYLG*
Ga0066903_1076011491	3300005764	Tropical Forest Soil	LILFDDQSNMNIKTAGPATIAPGGKVKSVQEAQAEFKIEFEGDSRATLYLADPGSSVAVRDKNNVVEYLG*
Ga0066903_1083823442	3300005764	Tropical Forest Soil	MKIRIAGAAAVSPGSKVKSVHEAKADFRIDFEDGSSATFCLADPGSSVAVRDKNNVVEYLG*
Ga0126374_104237251	3300009792	Tropical Forest Soil	MVVRCGALVLFDDQSNMKIKATEGATIPPGAKVKSVHEARGDFKIEFEDGSSATLCLADPGSSIAVGDKNNAVEYLG*
Ga0126380_114005482	3300010043	Tropical Forest Soil	MKIKTAGDAAVSPGSKVKSVHEAKAKFRIEFEEGSSATFCLADPGSSVAVRDKNNAVEYLG*
Ga0126380_118606402	3300010043	Tropical Forest Soil	MKIKTTRAGAASPGSKVKSVHEAQADFRIEFEDGSNVTFCLANPGSSVAVRDKNNAVECLG*
Ga0126373_113280472	3300010048	Tropical Forest Soil	VLFDDQSNMKVKIAGYATIAPSGKINSVHEAKTDFKIEFEDGSSPTLSVANPGSSVAVRDKNNAVEYLG*
Ga0126373_125900322	3300010048	Tropical Forest Soil	GPAAIAPGGKVKSVQEAKAVFKIDFEDGSSATLCLADPGSSVAVRDKNNVVEYLG*
Ga0126373_130503631	3300010048	Tropical Forest Soil	KTAKGATILPGAKVKSVYEARGDFKIEFEDGSSSTFCLAEPGSSVAVRDKHNAVEYLG*
Ga0126376_119971162	3300010359	Tropical Forest Soil	KTTGAAAVSAGNKVESVHEDKADFKIEFEDGSSATFCPADPGSSVAVRDKNNAVEYLG*
Ga0126376_122821941	3300010359	Tropical Forest Soil	KTARAGAASLGSKVKSVHEAQADFRIEFEDGSNVTFCLANPGSSVAVRDKNNAVECLG*
Ga0126376_123442651	3300010359	Tropical Forest Soil	VTTEPGSALVLFDDQSSMKIKTAGAAAVSPGSKVKSVREDKADFRIEFGDGSSATLCLADPGSSVAVRDKNNAVEYLG*
Ga0126378_106189093	3300010361	Tropical Forest Soil	KVKLAGPATIPPGGKIKSVHEAKAEFRIEFEDGSSATLCLANPGSSVAVRDENNAVEYLG
Ga0126379_105478252	3300010366	Tropical Forest Soil	MKIKTAGAAAVSPGNKVKSVHEAKADFRTEFEDGLSATFCLANPGSSVAVRDKIPFRLVALWV*
Ga0126379_109196941	3300010366	Tropical Forest Soil	HLCHCFTPCYVVHTSRMKVKTAGPATIPAGGKVKSVNETKAEFKIDFEDGSSATLYLVDPGPSVAVRDKNNAVEYLG*
Ga0126379_118437942	3300010366	Tropical Forest Soil	MKVKAAGPATIPPSGKVKSVHEAKAEFKIEFEDGSSATFCLANPGSSVAVRDKSNAVEYLG*
Ga0126381_1002052962	3300010376	Tropical Forest Soil	MKVKTAGPATIPAGGKVKSVNETKAEFKIDFEDGSSATLYLVDPGPSVAVRDKNNAVEYLG*
Ga0126381_1005446172	3300010376	Tropical Forest Soil	MQIKTAAAVAISQGIKVKSVHEAKANFKIEFEDGSSAKLCLADPGSSVAVRDKNNAVEYLG*
Ga0126381_1008105023	3300010376	Tropical Forest Soil	MKIKTAGAVAVSPGSKVKSVHEAKVDFKTEFEDGLSATFCLANPGSSVAVRDKIPFRF
Ga0126381_1008319352	3300010376	Tropical Forest Soil	MAMKIKTTGAAAVLPGSKVKSVHEAKADFKIEFEDGSRATFCLTNLGSSVAVRDKNNAVEYLG*
Ga0126381_1009066062	3300010376	Tropical Forest Soil	DDQSNMKVKIAGPATIPSRGKIKSVHEAKADFKIEFEDGSSATLSLANPGSSVAVRDKNNAVEYLG*
Ga0126381_1019761301	3300010376	Tropical Forest Soil	MKVKTAGPATIPPGGKVKSVHEAKAEFKIDFENGSSATLHLADPGSSVAVRDENNAVEYLG*
Ga0126383_101873254	3300010398	Tropical Forest Soil	LVLFDDQSRMKVKTAGPATIPAGGKVKSVNETKAEFKIDFEDGSSATLYLVDPGPSVAVRDKNNAVEYLG*
Ga0126383_117651982	3300010398	Tropical Forest Soil	SNMKIKTAGPATIPPGCKVKSVYEAKAEFKIDFEDGSSARVYLADPGSSIAVRDKNDAIEYLG*
Ga0126383_119905432	3300010398	Tropical Forest Soil	VFLVLFDDQSRMKIKTAGAAPVSPESKGKSVHEAEAEFRIEFSSATFCLANAGSSVAVQGKDNVVKYFG*
Ga0126383_123280121	3300010398	Tropical Forest Soil	TIKAVTTEPGSVLVQFDQSSMTIKTTGAAAVSPGSKAKSVHETKPEFRIEFEDGSSATFCLADPGSSVAVRDKNNAVEYLG*
Ga0126383_129476882	3300010398	Tropical Forest Soil	MNIKTAGPATIRPGGKVKSVHEAKAEFKIDFEDRSGATLYLADPGSSVAVRDKNNAVE*
Ga0164299_107887422	3300012958	Soil	VLFDDESSIKIKTAGTAAVSPGSKVKSVHEAKAHFKIEFEDGSSATFCLADPGSPVAVRDKNNAVEYLG*
Ga0126369_116435952	3300012971	Tropical Forest Soil	FDDQSSMKVKTAGPAAIASGGKIKSVHEAKADFRIEFEDGSSATLCLAAPGSSVAVRDRNNAVEYLG*
Ga0126369_117000092	3300012971	Tropical Forest Soil	MKIKTAGPTTIPQGARVKSVHEVKADFKIDFEDGSSATFCLANPGSSIAVRDKNNAVEYLG*
Ga0164309_116376191	3300012984	Soil	IKIKTAGTAAVSPGSKVKSVHEAKAHFKIEFEDGSSATFCLADPGSPVAVRDKNNAVEYLG*
Ga0182036_100686733	3300016270	Soil	MIEPGSVLVLFDDQSSMKIKTVGAAAVSPGSKVKSVHEAKADFKIEFEDGSSATFSLADPGSSVAIRDKNHAVEYLG
Ga0182036_100862771	3300016270	Soil	MKIKTAGPATIPPGGKVKSIHEAKAVFKIDFEDGSIATLCLADPGSSVAVRDKNNEVEYL
Ga0182036_103687661	3300016270	Soil	AATVEAGSVLVLFDDQSSMKIKTAGPATIAPGGKVKSVREAKADFRIEFENGSSAIVYLADPGSSVAVRDKNNAVEYLG
Ga0182036_104795481	3300016270	Soil	MQCVNSISCMRHSCSIDQSSMQIKTTSAAAVSLGSKVKYVHEDKAEFKIEFEDGSSATLYLADPGSSVAVRDKNNAVEYLG
Ga0182036_106535582	3300016270	Soil	KAVTTEPGSVLVLFDDESSMKIKTAGPATIPAGGKVKSVHEAKAEFRIEFEDGSSATFCLANPGSSVVVRDKNNAVEYLG
Ga0182036_116056231	3300016270	Soil	DQSNMKVKIAGPATIQPGGKIKSVHEVKADFKIEFEDGSSATLCLANPGSSVAVRDKNNAVEYLG
Ga0182041_107421991	3300016294	Soil	MDSNIQVTVLLTIEPGSALVLFDDQLSMKIKTTGAAAVSPGSKVKSVHEAKADFGIEFKDGSSATFCLADPGSPVTVRDQNNAVEYLG
Ga0182041_122584422	3300016294	Soil	GSVLVLFDDQSSMKIKTAGAATVSPASKVKSVHEAKADFRIEFEEGSNPKFWLAAPGSSVAVRDRNNAVEYLGYVPHTQKAGEWV
Ga0182035_102111081	3300016341	Soil	KTAGPATVPPRGKVKSVHESRTEFKIDFEDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0182035_103777202	3300016341	Soil	MKIKTAGPATIAPGGKVKSVHEAKAEFRIDFEDGSNATLCLADPGSSVAVRDKNNAVEYL
Ga0182035_120478841	3300016341	Soil	TVEPGGVLVLFDDQSNMKIKTTGPATVSPSGKVKSVYETNTDFKIEFEDGSSATFCLANAGSSVAVRDKNNAVEYLG
Ga0182032_103297461	3300016357	Soil	NMKLKAAGAAALPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAVRDKNNVVEY
Ga0182032_117842541	3300016357	Soil	KTAGPATIAPGGKVKSIQETKAEFKIDFEDGSSATLRLAEPGSSVAVRDKNNAVEYLG
Ga0182034_117981641	3300016371	Soil	LVLFDDQSSMKIKTGGAEAVSPGSKVKSVHEDKADFTIEFEDGSSTTFCLADPGSSVAVRDKNNGVEYLG
Ga0182034_118265221	3300016371	Soil	DDQSNMKIKTAGPATIPPGGKVKSVNEAQAEFKIDFEDGSSATLYLADPGSSVAVRDKNNAVEYLG
Ga0182034_118566811	3300016371	Soil	IEPGSVLVLFDDQSSMKIKTASAVAVSPGSKVTSVREDKADFKIEFEDGLSATFCLRDPGSSVAVRDKDNAVEYLG
Ga0182040_105251163	3300016387	Soil	KAATVERDGVLVVFDDQSNMKVKTVGPATTPPGGKVKSVHEAKAELKIDFEDGSSATLYLADPGSSVAVRDKNNVVEYLG
Ga0182040_105581122	3300016387	Soil	KAAGAAALPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAIRDKNNVVGYIA
Ga0182040_105912401	3300016387	Soil	MKIKTAGPATIPPGGKVKCVHESRAEFKIDFEDGSSASLCLADPGSSVAVRNKNNAVEYL
Ga0182040_112239841	3300016387	Soil	SVLILFDDQSSMKIKTAGAAAVSPGSKVKSVREDKADFRIEFGDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0182040_113934132	3300016387	Soil	SNMKIKIVGPATVPPGGKIKSVHEAKAEFKIDFEDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0182040_115252891	3300016387	Soil	EPATIPPGGKVKSVHESKAELKIEFEDGSSATLCLADPGSSVAVRDKNNAVKYLG
Ga0182037_104294892	3300016404	Soil	VVFDDESSMKIKTTVPASIPQGGKVKSVHEAKAEFKIEFEDGSSAKFCLTNPGSSVAVPDKN
Ga0182037_106850722	3300016404	Soil	KIKTAGPATIPPGGKVKSIHEAKAVFKIDFEDGSIATLCLADPGSSVAVRDKNNEVEYLG
Ga0182037_107471342	3300016404	Soil	MKIRTTGAAAVLPASKVKSVHEDKAEFKIEFEDGSSADPGSSVAVRDKNNIVEYLG
Ga0182037_114109702	3300016404	Soil	MKIKTARPATMPSGAKVKSVHEAKADFRIEFENGSSAIVYLADPGSSVAVRDKNNAVEYL
Ga0182037_116240271	3300016404	Soil	IKTTRAAAASPGSIVKPVHEAKADFRIEFEDGSSATFCLADPGSSVAVRDRNNAVEYFW
Ga0182037_118523862	3300016404	Soil	SSMKIKIAGAAAASLGSKVTSVQESKAEFKIDFEDGSSTKLCLANPGSSVAVGDKSNALEYRVNLAPFLRLRTIA
Ga0182037_118898721	3300016404	Soil	IKTAADAAISAGSKVKFVREAKTELKIDFEDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0182039_112957551	3300016422	Soil	VSDTNPFPVSPERSVLVLFDDQSSMTIKTAGAAAVSPRSKVKSVHEAKADFKIEFEDGSSATYCLADPGSFVAVRDKNNAVEYLG
Ga0182039_116668592	3300016422	Soil	GAVLVLFDDQSNMKIKTAGPATIPPGGKVKSVHEARAEFKIDFEDGSSATRCLADPGSSVAVRYKNHAVKYLG
Ga0182038_114933491	3300016445	Soil	SMKIKTTGAAAVSPGSKVKSVHEAKADFGIEFKDGSSATFCLADPGSPVTVRDQNNAVEYLG
Ga0213872_100239802	3300021361	Rhizosphere	MKFKTAGPATIPPGGKVASVHEAKAEFKIDFEDGSSAALHLADPGSSVAVRDKNNAVEYL
Ga0213879_100025552	3300021439	Bulk Soil	MKVKTAGPATIPPGGKVKSVHEAKAEFKIDFEDGSSAALHLADPGSSVAVRDKNNAVEYL
Ga0213878_102271871	3300021444	Bulk Soil	LLDDQSSMKIKTAAAATVSTGGKIKSVHEAKAELKIEFEDGSTATVQLADPGSSVAVRDRNNVVEYL
Ga0213878_102990872	3300021444	Bulk Soil	GPGRKCLVLFDDQSSMKIKTTEPAMIPPGGKVKSVQEAKAEFKIDFEDGSSATLCLADPGSSIAVRDKNDAVEYVG
Ga0126371_106307212	3300021560	Tropical Forest Soil	MKIKTTRAGAASLGSKVKSVHEAQADFRIEFEDGSNVTFCLANPGSSVAVRDKNNAVECL
Ga0126371_124833101	3300021560	Tropical Forest Soil	GAAAVSPGNKVKSVHEAKADFRTEFEDGLSATFCLANPGSSVAVRDKIPFRFVALWV
Ga0207663_106679522	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LVLFDDESSIKIKTAGTAAVSPGSKVKSVHEAKAHFKIEFEDGSSATFCLADPGSPVAVRDKNNAVEYLG
Ga0209731_10828041	3300027326	Forest Soil	MAVTIEPGSVLVLFHYQSSMKIKTAGAVAAIPPGSRVKSVSEAKAEFRIEFEDGSNATFCLANPGSSVAVRDKNSAVEYLG
Ga0318534_105273982	3300031544	Soil	IKTSGPATIPPGGKVKCVHESRAEFKIDFEDGSIATLCLADPGSSVAVRDKNNAVEYLG
Ga0318541_103673072	3300031545	Soil	MLCVIAGRRIRAVTVLFDDQSSMKIKTADAAAVSPGSKVKSVHEAKADFKMEFEDGSSATFCLADPGSSVTVRDQNNAVEYLG
Ga0318515_104230981	3300031572	Soil	LVLFDDESSMKIKTIGPATIPPGGKIKSVRETKAEFKIDFEDGSSATLCLAHPGSSVAVRDKNNAVEYLG
Ga0318561_103529072	3300031679	Soil	MKLKAAGAAAVPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAVRDKNNVVEYL
Ga0318572_107071272	3300031681	Soil	MKIKTAGDATISPGGKVKSVHESRTDFKIEFEDDASATFCLADSGSSVAVRDKE
Ga0307476_104927861	3300031715	Hardwood Forest Soil	MKIRTAAAVAVPPGGKVKFVQETEAELKIEFEDGSSATFRLADPGSSVAVRDKNSGGIPGVRLGQ
Ga0307474_105619621	3300031718	Hardwood Forest Soil	MKIRTAGAVALSPGGKVKSVQETETELKIEFEDGSSATFRLADPGSSVAVRDRNNSVEYL
Ga0318500_104259352	3300031724	Soil	LVLFDDQSSMKIKTAGAATVSPASKVKSVHEAKADFRIEFEEGSNPKFWLAAPGSSVAVRDRNNAVEYLGYVPHTQKAGEWV
Ga0318547_106735661	3300031781	Soil	KIAGDVAVSPASKVKSAHEAQADFKIDFEDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0310917_101139481	3300031833	Soil	VDHLGITRKIKTAGPATIPPGGKVKSVHEAKAEFKIDFEDGSSATLCLADPGSSVSVRDKNNALEYLG
Ga0310917_102794301	3300031833	Soil	LVLFDDQLSMKIKTTGAAAVSPGSKVKSVHEAKADFGIEFKDGSSATFCLADPGSPVTVRDQNNAVEYLG
Ga0310917_103251291	3300031833	Soil	MKIKTAGPATIPPGGKVKCVHESRAEFKIDFEDGSSATICLADPGSSVAVRDKNNAVEYL
Ga0318527_104521502	3300031859	Soil	MKLKAAGAAAVPPGSKVKSVHEAKVDFKIEFEDGSSATFCMADPGSSVAVRDKDNAVGY
Ga0306919_101036362	3300031879	Soil	MKLKAAGAAALPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAVRDKNNVVEYL
Ga0306919_106950991	3300031879	Soil	LVLFDDLSKMKIKTAGAAAVSPGSKVKSVQEAKADFRINFEDGSSATFSLADLGSSIASRPR
Ga0306925_103933323	3300031890	Soil	MKIKTAGAAAVSPGNKVKSVHEAKADFRTEFEDGLSATFCLANPGSSVAVRDKMPFGFVALWV
Ga0306925_105578292	3300031890	Soil	VKVATVDPGGVLVLFDDQSNMKIKTTGPATIWQGGKVKCVHESRAEFKIEFEDGSSATLRLADPGSSVAVRDKNNAVEYLG
Ga0306925_108899912	3300031890	Soil	MGATVKPGSVSVLFDDQSNMKIKTAGPATILEGGKVKFVHETKAEFKIDFEDGSNATLCLADPGSFVAVRDRNNAVEYLG
Ga0306925_117614181	3300031890	Soil	IEPGSFLILFDDQSSMKIKTAGAAAVSPGSKVKSVREDKADFRIEFGDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0306925_118005951	3300031890	Soil	MKIRTTGAAAVLPASKVKSVHEDKAEFKIEFEDGSSADPGSSVAVRDKNNIVEYLGRSDDQSL
Ga0318551_107531591	3300031896	Soil	IKTAGAAAVSPGSKVKSVREDKADFRIEFGDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0318520_105883411	3300031897	Soil	MKLKAAGAAAVPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAVRD
Ga0306923_100541629	3300031910	Soil	MKIKTTGLATIPPGGKVKSVQETKAEFKIEFEDGSSATLCLADPGSSVAVRDKNNAVEYL
Ga0306923_104317392	3300031910	Soil	MRIKTTGAAPVSPGSKVKSVHEAKTEFKIDFEDGSSATLCLADPGSSVAVRDKNNAVEYL
Ga0306923_105003441	3300031910	Soil	LVLFDDESHMKIKTAGPATIPPGGKVKSVHESKAEFKIEFEDGSSATLCLADPGSSVGVR
Ga0306923_117942701	3300031910	Soil	MKIRTTGAAAVLPASKVKSVHEDKAEFKIEFEDGSSADPGSSVAVRDKNNIVE
Ga0306923_124423311	3300031910	Soil	VLVLFDDQSSMKIKTAADAAISAGSKVKFVREAKTELKIDFEDGSSAILCLADPGSSVAVRDKNNAVEYLG
Ga0306921_126761322	3300031912	Soil	QSSMKIKTAGAATVSPASKVKSVHEAKADFRIEFEEGSNPKFWLAAPGSSVAVRDRNNAVEYLGYVPHTQKAGEWV
Ga0310912_103946922	3300031941	Soil	MKIRTTGAAAVLPASKVKSVHEDKAEFKIEFEDGSSADPGSSVAVRDKNNIVEYLGRSDD
Ga0310912_109091971	3300031941	Soil	LILFDDQSKMKIKTAGPATISPGGKVKSVHECRAEFKINFEDGSSARFCLADPGSSVAVRDRNNAVE
Ga0310916_102124193	3300031942	Soil	SKMKIKTAGPATIPPGGKVKSVHEAKAEFKIDFEDGSSATLCLDNPGSSVAVRDKNNAVEYLG
Ga0310916_103622393	3300031942	Soil	KIKTSGPATVPPGGKVKSVHESRAEFKIEFEDGSSATLCLADPGSSVAVRDKNNAVEYLG
Ga0310916_105984771	3300031942	Soil	LFDDQSNMKIKTTQPATIPPGGKVKSVREAKAELKIDFEDGSSATLYLADSGSAVAVRDKNNAVEYLG
Ga0310916_106012742	3300031942	Soil	ESRMKIKIAGPATIPPSGKVKSVHEAKAEFKIDFEDGSGAIFCLADPCSSVAVRDKSNAVEYLG
Ga0310916_107527412	3300031942	Soil	MRRLVLFDDQSNMKIKTSGGAAVSPGSKVKAVHEAKADFKIEFEDGSSVTFCLADPGSSVAVRDKNNVVEYLG
Ga0310910_110056012	3300031946	Soil	RPNSEAATVEPGGVLVLFDDLSKMKIKTAGAAAVSPGSKVKSVQEAKADFRINFEDGSSATFSLADLGSSIASRPR
Ga0306926_104704561	3300031954	Soil	MKIKTAEPATIPPGGKVKSVHEAKTEFKIGFEDGSSATLRPTDPGSSVAARDKNNAVEYL
Ga0306926_106326161	3300031954	Soil	WKIKTTGPATIPPGGKVKSVNEARAEFKIDFGDGSSATVYLANPGSSVAVRDKDDAVEYL
Ga0306926_122946712	3300031954	Soil	AGPATIPPGGKVKSVHEAKAEFKINFEDGSSVTLCLADPGSAVAVRDKSNAVEYLG
Ga0306926_127124311	3300031954	Soil	QSSMRIKTAGAAPVSPGSKVKSVHEAKADFKIEFEDGSSATFCLADPGSSVAIRDKNNVVEYLG
Ga0306922_106743451	3300032001	Soil	NMKLKAAGAAAVPPGSKVKSVHEAKANFRIEFEDGSSATFCLADPGSSVAVRDKNNVVEYLG
Ga0306922_113824602	3300032001	Soil	ERVDHLGITRKIKTAGPATIPPGGKVKSVHEAKAEFKIDFEDGSSATLCLADPGSSVSVRDKNNALEYLG
Ga0306922_123499971	3300032001	Soil	LVLFDDESSMKIKTIGPATIPPGGKIKSVRETKAEFKIDFEDGSSATLCLAHPGSSVAVRDK
Ga0306924_113078212	3300032076	Soil	QLSRCNRDWGSTAASQGGKVKAVQETKAEFKIDFEDSSNATMSLADPGSPVAVRDKNNAVEYVG
Ga0306920_1018692851	3300032261	Soil	ESRMKIKIVGPATIPPSGKANSVHEAKAEFKLDFEDGSGAIFCLADPCSSVAVRDKSNAVEYLG
Ga0306920_1023727061	3300032261	Soil	GSVLVRFDDQSSIKIKTTGPATIAPGGRVKSVHEAKAELRIEFEDGSSTTVYLAAPGSSVAVRDKNSTVEYLG
Ga0306920_1032171521	3300032261	Soil	MKIKTTGAASVSPGSKVKSVHEARADFKIEFEDGSDVTLCLADPGSSVAVRDKNNALEYL
Ga0306920_1042202691	3300032261	Soil	LVLFDDQSSMKIKTAGAAAVSLESKVRSAHEAKADFRIDLEDSSSATCCLANPVSSVAVRDENNAVEYLG
Ga0310914_100076031	3300033289	Soil	SVLIQFVDQSSMKIKTAGPATIPPGGKVKSVHEARAEFKIDFEDGSSATLCLGDPGSSVAVRDKDNAVEYLG
Ga0310914_100898541	3300033289	Soil	QSSLKIKTTGAAAVSPGSKVKSLYEAKAHFRIDFEDGSSATLSLADPGSSVAVRDRNNAVEYLG
Ga0310914_101553152	3300033289	Soil	MRRNQKLTKVIAGRTIKAVTTESGSVSVLFDDQSSMTIKTAGAAAVFKIEFEDGSSATFCLADPGSSVAVRDKNNAVEYLG
Ga0310914_102803883	3300033289	Soil	KMKIKTAGPATIPPGGKVKSVHEAKAEFKIDFEDGSSATLCLDNPGSSVAVRDKNNAVEYLG
Ga0310914_114638343	3300033289	Soil	ATISPGGKVKCVHEAKAEFKIDFEDGSSATLSLADPGSSVAVRDKNNAVEYLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences