Metagenome / Metatranscriptome Family F061339

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061339
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	70 residues
Representative Sequence	MMEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD
Number of Associated Samples	97
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.21 %
% of genes near scaffold ends (potentially truncated)	24.24 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.424 % of family members)
Environment Ontology (ENVO)	Unclassified (23.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.970 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.27% β-sheet: 30.61% Coil/Unstructured: 56.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01243	Putative_PNPOx	6.06
PF00072	Response_reg	3.03
PF00990	GGDEF	2.27
PF12840	HTH_20	2.27
PF13473	Cupredoxin_1	2.27
PF03793	PASTA	1.52
PF01545	Cation_efflux	1.52
PF02746	MR_MLE_N	1.52
PF14333	DUF4389	1.52
PF03446	NAD_binding_2	0.76
PF00702	Hydrolase	0.76
PF01807	zf-CHC2	0.76
PF01833	TIG	0.76
PF08448	PAS_4	0.76
PF01695	IstB_IS21	0.76
PF00532	Peripla_BP_1	0.76
PF08352	oligo_HPY	0.76
PF11181	YflT	0.76
PF00551	Formyl_trans_N	0.76
PF13531	SBP_bac_11	0.76
PF08240	ADH_N	0.76
PF12697	Abhydrolase_6	0.76
PF13378	MR_MLE_C	0.76
PF12277	DUF3618	0.76
PF00528	BPD_transp_1	0.76
PF00378	ECH_1	0.76
PF03640	Lipoprotein_15	0.76
PF13360	PQQ_2	0.76
PF00535	Glycos_transf_2	0.76
PF04024	PspC	0.76
PF00400	WD40	0.76
PF13592	HTH_33	0.76
PF06736	TMEM175	0.76
PF01145	Band_7	0.76
PF04993	TfoX_N	0.76
PF04199	Cyclase	0.76
PF01434	Peptidase_M41	0.76
PF03976	PPK2	0.76
PF00106	adh_short	0.76
PF01925	TauE	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	3.03
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.52
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.52
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.52
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.76
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.76
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.76
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.76
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.76
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.76
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.76
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.55 %
Unclassified	root	N/A	45.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.55 %
Unclassified	root	N/A	45.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.55 %
Unclassified	root	N/A	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.06 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.06 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.76 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.76 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.76 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.76 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	0.76 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	0.76 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.82 %
Nitrolancea hollandica Lb	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb	0.76 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.76 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101510928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300001538\|A10PFW1_12006163	Not Available	514	Open in IMG/M
3300001661\|JGI12053J15887_10282653	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300004633\|Ga0066395_10168456	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300005093\|Ga0062594_103018856	Not Available	525	Open in IMG/M
3300005171\|Ga0066677_10202295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1112	Open in IMG/M
3300005178\|Ga0066688_10889668	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300005178\|Ga0066688_10900303	Not Available	546	Open in IMG/M
3300005179\|Ga0066684_10790080	Not Available	628	Open in IMG/M
3300005180\|Ga0066685_10560908	Not Available	787	Open in IMG/M
3300005187\|Ga0066675_10619509	Not Available	813	Open in IMG/M
3300005340\|Ga0070689_102123663	Not Available	514	Open in IMG/M
3300005365\|Ga0070688_101088411	Not Available	638	Open in IMG/M
3300005445\|Ga0070708_100117009	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300005445\|Ga0070708_100805270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	883	Open in IMG/M
3300005445\|Ga0070708_101656121	Not Available	595	Open in IMG/M
3300005446\|Ga0066686_10840693	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005447\|Ga0066689_10639159	Not Available	669	Open in IMG/M
3300005455\|Ga0070663_101558240	Not Available	588	Open in IMG/M
3300005467\|Ga0070706_100388227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1299	Open in IMG/M
3300005467\|Ga0070706_100694820	Not Available	943	Open in IMG/M
3300005471\|Ga0070698_100730919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	932	Open in IMG/M
3300005471\|Ga0070698_101124497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300005536\|Ga0070697_100095610	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300005537\|Ga0070730_10008657	All Organisms → cellular organisms → Bacteria	8513	Open in IMG/M
3300005537\|Ga0070730_10127808	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300005537\|Ga0070730_10622485	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300005552\|Ga0066701_10547525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300005556\|Ga0066707_10198451	Not Available	1294	Open in IMG/M
3300005559\|Ga0066700_10875107	Not Available	599	Open in IMG/M
3300005561\|Ga0066699_10014183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4132	Open in IMG/M
3300005561\|Ga0066699_10822570	Not Available	653	Open in IMG/M
3300005561\|Ga0066699_11047629	Not Available	564	Open in IMG/M
3300005564\|Ga0070664_102378992	Not Available	502	Open in IMG/M
3300005575\|Ga0066702_10204774	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005576\|Ga0066708_11041051	Not Available	508	Open in IMG/M
3300005719\|Ga0068861_102708020	Not Available	500	Open in IMG/M
3300005764\|Ga0066903_100323041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2466	Open in IMG/M
3300005764\|Ga0066903_101505908	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1270	Open in IMG/M
3300005841\|Ga0068863_100900242	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300006032\|Ga0066696_10478215	Not Available	817	Open in IMG/M
3300006046\|Ga0066652_100848410	All Organisms → cellular organisms → Bacteria → Terrabacteria group	873	Open in IMG/M
3300006050\|Ga0075028_100387225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300009012\|Ga0066710_100889184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1370	Open in IMG/M
3300009012\|Ga0066710_102830776	Not Available	684	Open in IMG/M
3300009038\|Ga0099829_11007243	Not Available	691	Open in IMG/M
3300009088\|Ga0099830_11734647	Not Available	521	Open in IMG/M
3300009089\|Ga0099828_11701221	Not Available	555	Open in IMG/M
3300009090\|Ga0099827_11151326	Not Available	674	Open in IMG/M
3300009094\|Ga0111539_12939317	Not Available	551	Open in IMG/M
3300009137\|Ga0066709_103887211	Not Available	543	Open in IMG/M
3300009545\|Ga0105237_12574369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	519	Open in IMG/M
3300010166\|Ga0126306_10138404	Not Available	1798	Open in IMG/M
3300010321\|Ga0134067_10446038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300010366\|Ga0126379_10278516	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300010403\|Ga0134123_11296804	Not Available	763	Open in IMG/M
3300011270\|Ga0137391_10573734	Not Available	948	Open in IMG/M
3300012096\|Ga0137389_11501214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300012198\|Ga0137364_11009486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300012201\|Ga0137365_10148719	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300012204\|Ga0137374_10013393	All Organisms → cellular organisms → Bacteria	9526	Open in IMG/M
3300012206\|Ga0137380_11575893	Not Available	541	Open in IMG/M
3300012208\|Ga0137376_10374577	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012208\|Ga0137376_11029672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb	705	Open in IMG/M
3300012209\|Ga0137379_10689384	Not Available	927	Open in IMG/M
3300012210\|Ga0137378_10522312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1095	Open in IMG/M
3300012211\|Ga0137377_11639987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300012212\|Ga0150985_115196577	Not Available	884	Open in IMG/M
3300012353\|Ga0137367_10027480	All Organisms → cellular organisms → Bacteria	4403	Open in IMG/M
3300012359\|Ga0137385_11588896	Not Available	518	Open in IMG/M
3300012360\|Ga0137375_10035742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5578	Open in IMG/M
3300012469\|Ga0150984_116208590	All Organisms → cellular organisms → Bacteria	2290	Open in IMG/M
3300012532\|Ga0137373_10045666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4113	Open in IMG/M
3300012532\|Ga0137373_10225331	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300012532\|Ga0137373_10876187	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300012917\|Ga0137395_10546462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	836	Open in IMG/M
3300012918\|Ga0137396_10340475	Not Available	1110	Open in IMG/M
3300012971\|Ga0126369_11539977	Not Available	755	Open in IMG/M
3300012971\|Ga0126369_12954378	Not Available	557	Open in IMG/M
3300013297\|Ga0157378_10826977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	953	Open in IMG/M
3300013765\|Ga0120172_1079972	Not Available	808	Open in IMG/M
3300013772\|Ga0120158_10124627	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300014325\|Ga0163163_12119342	Not Available	622	Open in IMG/M
3300015371\|Ga0132258_10582880	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300015371\|Ga0132258_10878470	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2263	Open in IMG/M
3300015371\|Ga0132258_11821650	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300015372\|Ga0132256_101547666	All Organisms → cellular organisms → Bacteria → Terrabacteria group	773	Open in IMG/M
3300015372\|Ga0132256_102073002	Not Available	674	Open in IMG/M
3300015373\|Ga0132257_101089417	Not Available	1008	Open in IMG/M
3300015373\|Ga0132257_102794417	Not Available	636	Open in IMG/M
3300015373\|Ga0132257_104435848	Not Available	511	Open in IMG/M
3300015373\|Ga0132257_104477394	Not Available	508	Open in IMG/M
3300015374\|Ga0132255_103185944	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300016387\|Ga0182040_11074409	Not Available	673	Open in IMG/M
3300016422\|Ga0182039_11627456	Not Available	590	Open in IMG/M
3300016445\|Ga0182038_12196718	Not Available	500	Open in IMG/M
3300017553\|Ga0182744_1213615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	714	Open in IMG/M
3300018468\|Ga0066662_10112223	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300018468\|Ga0066662_10408355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1197	Open in IMG/M
3300018468\|Ga0066662_11948561	Not Available	615	Open in IMG/M
3300018476\|Ga0190274_13335904	Not Available	541	Open in IMG/M
3300021362\|Ga0213882_10283727	Not Available	689	Open in IMG/M
3300021384\|Ga0213876_10045557	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300021384\|Ga0213876_10060855	Not Available	1992	Open in IMG/M
3300021384\|Ga0213876_10097867	Not Available	1554	Open in IMG/M
3300021384\|Ga0213876_10795276	Not Available	504	Open in IMG/M
3300021388\|Ga0213875_10323640	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300021560\|Ga0126371_13327786	Not Available	543	Open in IMG/M
3300021861\|Ga0213853_10451096	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300021861\|Ga0213853_10621656	Not Available	763	Open in IMG/M
3300021861\|Ga0213853_10657717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300021861\|Ga0213853_10743429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	3106	Open in IMG/M
3300025910\|Ga0207684_10856026	Not Available	766	Open in IMG/M
3300025910\|Ga0207684_10930215	All Organisms → cellular organisms → Bacteria → Terrabacteria group	730	Open in IMG/M
3300025910\|Ga0207684_11360327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300025915\|Ga0207693_10854451	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300025922\|Ga0207646_10758948	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300025930\|Ga0207701_10548846	Not Available	987	Open in IMG/M
3300025930\|Ga0207701_10891082	Not Available	745	Open in IMG/M
3300025930\|Ga0207701_10955046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	716	Open in IMG/M
3300026552\|Ga0209577_10747301	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300027857\|Ga0209166_10004352	All Organisms → cellular organisms → Bacteria	9932	Open in IMG/M
3300027857\|Ga0209166_10297683	All Organisms → cellular organisms → Bacteria → Terrabacteria group	849	Open in IMG/M
3300027874\|Ga0209465_10383729	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300027915\|Ga0209069_10551933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300031520\|Ga0272428_1000113	All Organisms → cellular organisms → Bacteria	160505	Open in IMG/M
3300031520\|Ga0272428_1002036	All Organisms → cellular organisms → Bacteria	40998	Open in IMG/M
3300031546\|Ga0318538_10692643	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300031954\|Ga0306926_11116170	Not Available	932	Open in IMG/M
3300032001\|Ga0306922_11028118	Not Available	849	Open in IMG/M
3300032059\|Ga0318533_11243231	All Organisms → cellular organisms → Bacteria → Terrabacteria group	545	Open in IMG/M
3300033181\|Ga0272431_10000513	All Organisms → cellular organisms → Bacteria	93412	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.06%
Host-Associated	Host-Associated	18.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.52%
Plants	Host-Associated → Plants	18.94%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.06%
Roots	Host-Associated → Plants → Roots	4.55%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	2.27%
Sediment	Environmental → Aquatic → Sediment	1.52%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.82%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.03%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.52%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.27%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.79%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.79%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	2.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017553	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C Kraft MG (version 2)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1015109282	3300000559	Soil	LPSEVRVGQVWEQTSKHERGMQLEVVRATGRRWVLRPVGGGPSKKRGLREGLWTLSAEQLNATCQLVRDVH*
A10PFW1_120061631	3300001538	Permafrost	MADVKIGQLWEQVSKHERGMLLEVVRGTGPRWVLKPVGGGPSKKRGLREGLWTLSAEQIN
JGI12053J15887_102826532	3300001661	Forest Soil	MPEVQVGQVWEQVSKHERGMQLEVVRGTGRRWILRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVRDA*
Ga0066395_101684562	3300004633	Tropical Forest Soil	MPDVQVGQVREQVSKHERGMQLEVVRSTGRRWVLRPIGGGPSKKRGLREGRWTLGAEQLNASCRLVRAR*
Ga0062594_1030188561	3300005093	Soil	MDDIRVGQVWEQVSKHERGMQLEIVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVN*
Ga0066677_102022951	3300005171	Soil	VSKHERGMRLEVVRPTGQRWVLRPIGGAPSKKRGLPEGLWTLSAEQLNATCRLVKDSA*
Ga0066688_108896682	3300005178	Soil	PSTMTEVRIGQVWEQVSKHERGMHLEVVRNTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLIRDVD*
Ga0066688_109003032	3300005178	Soil	EVRVGQVWEQVSKHERGMQLEVVRNTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRGVD*
Ga0066684_107900802	3300005179	Soil	MDGVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVN*
Ga0066685_105609081	3300005180	Soil	MMEVKVGQVWEQVSKHERGMQLEVVRGTGRRWVLRPVGGGPSKKRGLREGLWTLSTGQINATCRLVRGVD*
Ga0066675_106195092	3300005187	Soil	QVSKHERGMRLEVVRSTRQRWVLRPIGGAPSKKRGLPEGLWTLSAEQVNATCRLVKDSA*
Ga0070689_1021236632	3300005340	Switchgrass Rhizosphere	MPEVQIGQVWEQVSKHERGMQLEVVRSTGRRWVLRPVGGGPSKKRGLREGLWTLSGEQLNTTCRLVREAPRP*
Ga0070688_1010884112	3300005365	Switchgrass Rhizosphere	VGQVWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGVWTLSSEQLNATCQLVRGVD*
Ga0070708_1001170095	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVEVRVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0070708_1008052701	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVRIGQIWEQVSKHERGMQLEVVRTTGRRWVLRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVRDTH*
Ga0070708_1016561211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	CKVRPSTVTEVRIGQVWEQVSKHERGMHLEVVRNTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDV*
Ga0066686_108406931	3300005446	Soil	WEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0066689_106391591	3300005447	Soil	MMEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRRVGGGPSKKRGLREGLWTLSTEQINATCRLVRGVD*
Ga0070663_1015582401	3300005455	Corn Rhizosphere	MPEVRLGQIWEQVSKHERGMRLEVVRQTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQLNATCRLVRDTG*
Ga0070706_1003882273	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIEVHVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVREGD*
Ga0070706_1006948202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0070698_1007309192	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHDAVRLQPPTMVEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0070698_1011244972	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVAVRVGQVWEQVSKHERGMQLEVVRDTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0070697_1000956104	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0070730_100086579	3300005537	Surface Soil	MAEVKLGQLWEQVSKHERGMVLEVVRATGPRFVLKPVGGGPSKKRGLREGLWTLSAEQINSTCRLLRDA*
Ga0070730_101278082	3300005537	Surface Soil	MPAVRVGQVWEQVSKHERGMRLEVVRGTGQRWVLRPVGGGPSKKRGLREGLWTLSDAQLNTTCRLVRDVPENDAGPGG*
Ga0070730_106224852	3300005537	Surface Soil	QVWEQVSKHERGMQLEVMRSTGRRWVLRPVGGGPSKKRGLREGLWTLSNEQITTTCRLVREAD*
Ga0066701_105475252	3300005552	Soil	MPEVQVGQVWEQVSKHERGMQLEVVRATGPRWVLRPIGGGPSKKRGLREGVWTLTAEQINATCRLVRDAR*
Ga0066707_101984513	3300005556	Soil	MADVKIGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLKDV*
Ga0066700_108751072	3300005559	Soil	MVEVKVGQVWEQFSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLLRDVD*
Ga0066699_100141831	3300005561	Soil	MTEVRIGQVWEQVSKHERGMHLEVVRNTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLIRDVD*
Ga0066699_108225701	3300005561	Soil	MMEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRGVD*
Ga0066699_110476292	3300005561	Soil	MEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRGVD*
Ga0070664_1023789922	3300005564	Corn Rhizosphere	MPEVRLGQIWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGVWTLSSEQLNATCQLVRGVD*
Ga0066702_102047742	3300005575	Soil	MCAVSLHNPARSRPTTVMEVRVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRGVD*
Ga0066708_110410511	3300005576	Soil	KHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINVTCRLVREVD*
Ga0068861_1027080201	3300005719	Switchgrass Rhizosphere	MPEVQIGQVWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPRKKRGLREGLWTLSTEQLNATCQLVRDVS*
Ga0066903_1003230413	3300005764	Tropical Forest Soil	MDGVGVGQVREQVSKHERGMQLEVVRGTGHRCVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVD*
Ga0066903_1015059082	3300005764	Tropical Forest Soil	MESVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVD*
Ga0068863_1009002422	3300005841	Switchgrass Rhizosphere	MADVRVGQVWEQISKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGLWTLTSDQLNATCQLVRDVH*
Ga0066696_104782152	3300006032	Soil	QPSTVTEVRIGQVWEQVSKHERGMQLEVVRNTGPRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0066652_1008484102	3300006046	Soil	MRNAVPLRPPTMTEVRVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRGID*
Ga0075028_1003872252	3300006050	Watersheds	MDQVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGMWTLSTEQLNTTCRLVRDVD*
Ga0066710_1008891843	3300009012	Grasslands Soil	MPEVQVGQVWEQVSKHERGMRLEVVRSTGRRWVLRPIGGGPSKKRGLREGLWTLSAEQLNATCRLVR
Ga0066710_1028307762	3300009012	Grasslands Soil	MADVKIGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLKDV
Ga0099829_110072432	3300009038	Vadose Zone Soil	MPEVQVGQIWEQVSKHERGMRLEVVRTTGRRWILRPVGGGPSKKRGLREGLWTLNSEQLNATCRLVRDKDAP*
Ga0099830_117346472	3300009088	Vadose Zone Soil	VGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVREGD*
Ga0099828_117012211	3300009089	Vadose Zone Soil	QVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0099827_111513262	3300009090	Vadose Zone Soil	MPEVQVGQVWEQVSKHERGMQLEVMRGTGRRWILRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVREA*
Ga0111539_129393171	3300009094	Populus Rhizosphere	MESVRVGQIWEQVSKHERGMHLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0066709_1038872111	3300009137	Grasslands Soil	MADVKIGQLWEQVSKHERGMRLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDV*
Ga0105237_125743692	3300009545	Corn Rhizosphere	AMAEVKLGQLWEQVSKHERGMLLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDA*
Ga0126306_101384043	3300010166	Serpentine Soil	MPEVRMGQIWEQVSKHERGMQLEVVRATGRRWVLRPVGGGPSKKRGLREGIWTLSAEQLNATCRLVRDST*
Ga0134067_104460381	3300010321	Grasslands Soil	LHNAVTLQPSTVTEVRIGQVWEQVSKHERGMQLEVVRNTGPRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0126379_102785163	3300010366	Tropical Forest Soil	MLRHGSLMNEVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPIGGGPSKKRGLREGLWTLSTEQINATCRLVRDAD*
Ga0134123_112968041	3300010403	Terrestrial Soil	MPEVHVGQVWEQVSKHERGMQLEVVRSTGHRWVLRPVGGGPSKKRGLREGLWTLSSEQLNTTCRLVRDSD*
Ga0137391_105737342	3300011270	Vadose Zone Soil	MMEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0137389_115012142	3300012096	Vadose Zone Soil	MHLLACEAAHTAGMPDVQVGQVWEQVSKHERGMQLEVVRATGPRWVLRPIGGGPSKKRGLREGVWTLSAEQINATCRLVRDVH*
Ga0137364_110094862	3300012198	Vadose Zone Soil	MADVRVGQVWEQTSKHERGMQLEVVRATGRRWVLRPVGGGPSKKRGLREGLWTLSSEQLNATCQLVRDVH*
Ga0137365_101487192	3300012201	Vadose Zone Soil	MWEQVSKHERGMRLEVVRPTGQRWVLRPIGGAPSKKRGLREGLWTLSAEQLNATCRLVKDSA*
Ga0137374_100133937	3300012204	Vadose Zone Soil	MPEVQIGQVWEQVSKHERGMQLEVVRATGRRWILRPIGGGPSKKRGLREGLWTLSAEQLNTTCRLVRDAH*
Ga0137380_115758932	3300012206	Vadose Zone Soil	VRCVRRVMADVKIGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLKDV*
Ga0137376_103745773	3300012208	Vadose Zone Soil	MRNAVLLRSPTMTEVRVGQVWEQVSKHERGMQLEVLRDTGRRWVLRPVGGGPSRKRGLREGLWTLSTEQINATCRLVRGID*
Ga0137376_110296721	3300012208	Vadose Zone Soil	MADVRVGQVWEQTSKHERGMQLEVVRATGRRWVLRPVGGGPSKKRGLREGLWTLSSEQLNATCQLV
Ga0137379_106893841	3300012209	Vadose Zone Soil	MVEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0137378_105223122	3300012210	Vadose Zone Soil	MSAEFGHECLVRPMKQVSKHERGMQLEVVRATGSRWVRRPIGGGPGKKRGLREGLWTLSAEQINATCRLVRDAR*
Ga0137377_116399872	3300012211	Vadose Zone Soil	RGGAYSDMPEVQVGQVWEQVSKHERGMQLEVVRGTGRRWILRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVRGAP*
Ga0150985_1151965772	3300012212	Avena Fatua Rhizosphere	VGQVWEQVSKHERGMQLEVVRSTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIHATCRLVRDVTDPC*
Ga0137367_100274802	3300012353	Vadose Zone Soil	MTDVRVGQLWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGLWTLSSEQINATCQLVRDVD*
Ga0137385_115888961	3300012359	Vadose Zone Soil	MAEVQVGQVWEQVSKHERGMQLEVVRATGRRWILRPMGGGPSKKRGLREGLWTLSTELLNTTCRLLRDAR*
Ga0137375_100357424	3300012360	Vadose Zone Soil	VIHYARMPEVQIGQVWEQVSKHERGMQLEVVRATGRRWILRPIGGGPSKKRGLRERRLTASAEQLNTTCRLVRDAH*
Ga0150984_1162085904	3300012469	Avena Fatua Rhizosphere	VRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIHATCRLVRDVD*
Ga0137373_100456665	3300012532	Vadose Zone Soil	MTRMPEVQIGQVWEQVSKHERGMQLEVVRATGRRWILRPIGGGPSKKRGLREGLWTLSAEQLNTTCRLVRDAH*
Ga0137373_102253311	3300012532	Vadose Zone Soil	MPEVQVGQIWEQVSKHERGMQLEVVRATGRRWVLRPIGGGPSKKRGLREGVWTLSAEQLNTTCRLVRDAHSP*
Ga0137373_108761871	3300012532	Vadose Zone Soil	MDGVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRL
Ga0137395_105464622	3300012917	Vadose Zone Soil	MPEVQVGQGWEQVSKHERGMRLEVVRSTGRRWVLRPIGGGPSKKRGLREGLWTLSAEQLNATCRLVRES*
Ga0137396_103404751	3300012918	Vadose Zone Soil	MHLRAAEAAHTAGMPDVQVGQVWEQVSKHERGMQLEVVRATGPRWVLRPIGGGPSKKRGLREGLWTLSAEQINTTCRLVRDVH*
Ga0126369_115399772	3300012971	Tropical Forest Soil	MESVRVGQIWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTGQINATCRLFRDVG*
Ga0126369_129543782	3300012971	Tropical Forest Soil	MDGVRVGQVWEQVSKHERGMQLQVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVDDPG*
Ga0157378_108269773	3300013297	Miscanthus Rhizosphere	MAEVRVGQVWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQLNATCQLVRDVS*
Ga0120172_10799722	3300013765	Permafrost	MADVKIGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDV*
Ga0120158_101246273	3300013772	Permafrost	MADVKIGQLWEQVSKHERGMLLEVVRGTGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDA*
Ga0163163_121193422	3300014325	Switchgrass Rhizosphere	MPEVQIGQVWEQVSKHERGMQLEVVRSTGRRWVLRPVGGGPSKKRGLREGLWTLSGEQLNTTCRLVRDAPRP*
Ga0132258_105828802	3300015371	Arabidopsis Rhizosphere	MPEVRVGQVWEQVSKHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGVWTLSSEQLNATCQLVRGVD*
Ga0132258_108784702	3300015371	Arabidopsis Rhizosphere	MESVRVGQIWEQVSKHERGMRLEVVRGTGHRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD*
Ga0132258_118216502	3300015371	Arabidopsis Rhizosphere	MPEVQVGQIWQQVSKHERGMRLKVVRATGPRWVLRPVGGGPSKKRDLREGVWTLIADEINSTCRLVRDAD*
Ga0132256_1015476662	3300015372	Arabidopsis Rhizosphere	MESVRVGQIWEQVSKHERGMRLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD*
Ga0132256_1020730021	3300015372	Arabidopsis Rhizosphere	MPEVRVGQVWEQVSKHERGMQLEVVRTTGPRWVLRPVGGGPSKKRGLREGLWTLSSEQLNATCQLVRGID*
Ga0132257_1010894172	3300015373	Arabidopsis Rhizosphere	MESVRVGQIWEQVSKHERGMRLEVVRGTGHRWVLRPVGGGPSKKRGLREGLCTLSTEQINATCRLVRDVD*
Ga0132257_1027944171	3300015373	Arabidopsis Rhizosphere	KHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGLWTLSSEQLNATCQLVRGVD*
Ga0132257_1044358482	3300015373	Arabidopsis Rhizosphere	VPEVRLGQIWEQVSKHERGMRLEVVRETGRRWVLRPVGGGPSKKRGLREGVWTLSTEQLNATCRLVRDTG*
Ga0132257_1044773941	3300015373	Arabidopsis Rhizosphere	KHERGMQLEVVRTTGRRWVLRPVGGGPSKKRGLREGLWTLSGEQLNATCQLVRGVD*
Ga0132255_1031859441	3300015374	Arabidopsis Rhizosphere	MESVRVGQIWEQVSKHERGMRLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINAT
Ga0182040_110744091	3300016387	Soil	MDGVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD
Ga0182039_116274562	3300016422	Soil	MESVRVGQIWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVD
Ga0182038_121967182	3300016445	Soil	MESVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLV
Ga0182744_12136152	3300017553	Compost	MPQVRVGQVWEQVSKHERGMRLEVVRATGHRWVMKPVGGGPSKKRGLREGLWTLSEEQIHATCQLLRDV
Ga0066662_101122231	3300018468	Grasslands Soil	MDVRVGQVWEQVSKHERGMQLQVVRGTGHRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD
Ga0066662_104083552	3300018468	Grasslands Soil	MTEVRIGQVWEQVSKHERGMHLEVVRTTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLIRDVD
Ga0066662_119485612	3300018468	Grasslands Soil	MEVRVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINVTCRLV
Ga0190274_133359041	3300018476	Soil	QIWEQTVKHERGMRLQVVRSTSARWILRPVGGGPSKKRGLREGVWTLSEDQLRNTCVLIS
Ga0213882_102837271	3300021362	Exposed Rock	VRLGQVWEQVSKHERGLRLEVVRQTGPRWVLRPVGGGPSKKRGLREGVWTLSAEQLNATCRLVREAR
Ga0213876_100455573	3300021384	Plant Roots	MTEIRPGQIWEQVAKHERGLRLEVVRPTGHRWVLRPAGGGPSKKRGLREGVWTLSAEQLQATCRLVRDVH
Ga0213876_100608553	3300021384	Plant Roots	MPDVRLGQIWEQVAKHERGLRLEVVRQTGPRWVLRPVGGGPSKKRGLREGVWTLSAEQLNATCRLVREAR
Ga0213876_100978672	3300021384	Plant Roots	VPEVRLGQVWEQVSKHERGLRLEVVRQTGPRWVLRPVGGGPSKKRGLREGVWTLSAEQLNATCRLVREAR
Ga0213876_107952762	3300021384	Plant Roots	VRLGQIWEQVAKHERGLRLEVVRQTGPRWVLRPVGGGPSKKRGLREGVWTLSAEQLNATCRLVREAR
Ga0213875_103236402	3300021388	Plant Roots	VTEIRPGQVWEQVAKHERGLRLEVVRPTGHRWVLRPAGGGPSKKRGLREGVWTLSAEQLQATCRLVRDAP
Ga0126371_133277862	3300021560	Tropical Forest Soil	SNARMLMLRHGSLMNEVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPIGGGPSKKRGLREGLWTLSTEQINATCRLVRDAD
Ga0213853_104510962	3300021861	Watersheds	VADIKIGQLWEQVSKHERGMQLEVVRATGPRWVMKPVGGGPSKKRGLREGLWTLTAEQINATCRLLRDA
Ga0213853_106216562	3300021861	Watersheds	RALRAMADVKIGQLWEQVSKHERGMLLEVVRATGPRWVLKPAGGGPSKKRGLREGLWTLSAEQINATCRLLRDA
Ga0213853_106577172	3300021861	Watersheds	MTDVRIGQVWEQTSKHERGMQLEVVRSTGHRWVLRPVGGGPSKKRGLREGIWTLSTEQILSTCRLVRDSDS
Ga0213853_107434294	3300021861	Watersheds	MADVKVGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDA
Ga0207684_108560262	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD
Ga0207684_109302151	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVREGD
Ga0207684_113603272	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVRIGQIWEQVSKHERGMQLEVVRTTGRRWVLRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVRDTH
Ga0207693_108544512	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQTIQVRQVWEQVCKHERGMRLEVIRPTGHRWVLQPVGGGPSKKRGLREGVWTLSEEQINATCRIVRGTP
Ga0207646_107589482	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHDAVTLQRPTMVEVKVGQVWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLVRDVD
Ga0207701_105488462	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVQVGQIWEQVSKHERGMRLEVMRTTGRRWVLRPIGGGPSKKRGLREGLWTLSSEQLNTTCRLVRDGY
Ga0207701_108910822	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDDIRVGQVWEQVSKHERGMQLEIVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVN
Ga0207701_109550462	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VARRAVTIGAMPEVRVGQVWEQVSKHERGMQLEVVRSTGRRWVLRPVGGGPSKKRGLREGLWTLST
Ga0209577_107473012	3300026552	Soil	STMTEVRIGQVWEQVSKHERGMHLEVVRNTGRRWVLRPVGGGPSKKRGLREGVWTLSTEQINATCRLIRDVD
Ga0209166_100043522	3300027857	Surface Soil	MAEVKLGQLWEQVSKHERGMVLEVVRATGPRFVLKPVGGGPSKKRGLREGLWTLSAEQINSTCRLLRDA
Ga0209166_102976832	3300027857	Surface Soil	MTDIRVGQVWEQVSKHERGMQLEVMRSTGRRWVLRPVGGGPSKKRGLREGLWTLSNEQITTTCRLVREAD
Ga0209465_103837292	3300027874	Tropical Forest Soil	MPDVQVGQVREQVSKHERGMQLEVVRSTGRRWVLRPIGGGPSKKRGLREGRWTLGAEQLNASCRLVRAR
Ga0209069_105519331	3300027915	Watersheds	VWEQVSKHERGMQLEVVRDTGRRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVREVD
Ga0272428_1000113139	3300031520	Rock	MARILSYFNPMPEVRVGQVWEQVSKHERGMQLEVVRATGRRWVLRPIGGGPSKKRGLREGVWTLSAEQLNATCRLVREGR
Ga0272428_100203618	3300031520	Rock	MADVKIGQLWEQVSKHERGMQLEVVRATGPRWVLKPVGGGPSKKRGLREGLWTLSAEQINATCRLLRDA
Ga0318538_106926432	3300031546	Soil	MMRQAVMSDVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPIGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD
Ga0306926_111161701	3300031954	Soil	MESVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVD
Ga0306922_110281181	3300032001	Soil	RVGMESVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQINATCRLVRDVD
Ga0318533_112432311	3300032059	Soil	MDGVRVGQVWEQVSKHERGMQLEVVRGTGHRWVLRPVGGGPSKKRGLREGLWTLSTEQIKATCRLVRDVD
Ga0272431_1000051353	3300033181	Rock	MPEVRVGQVWEQVSKHERGMQLEVVRATGRRWVLRPIGGGPSKKRGLREGVWTLSAEQLNTTCRLVREGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061339

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences