Metagenome / Metatranscriptome Family F061336

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061336
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	104 residues
Representative Sequence	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLAREEE
Number of Associated Samples	98
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.30 %
% of genes near scaffold ends (potentially truncated)	25.76 %
% of genes from short scaffolds (< 2000 bps)	71.97 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (21.970 % of family members)
Environment Ontology (ENVO)	Unclassified (37.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.21% β-sheet: 0.00% Coil/Unstructured: 28.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.37.1.1: ABC transporter transmembrane region	d4a82a1	4a82	0.7519
f.5.1.0: automated matches	d5azsa_	5azs	0.67746
f.5.1.0: automated matches	d5azpa_	5azp	0.66727
f.5.1.0: automated matches	d1yc9a_	1yc9	0.65857
a.127.1.1: L-aspartase/fumarase	d1c3ca_	1c3c	0.65562

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00171	Aldedh	28.03
PF00465	Fe-ADH	19.70
PF02075	RuvC	4.55
PF13466	STAS_2	3.79
PF01740	STAS	3.03
PF00490	ALAD	0.76
PF12698	ABC2_membrane_3	0.76
PF03441	FAD_binding_7	0.76
PF00724	Oxidored_FMN	0.76
PF00069	Pkinase	0.76
PF02784	Orn_Arg_deC_N	0.76
PF10569	Obsolete Pfam Family	0.76
PF01578	Cytochrom_C_asm	0.76
PF02541	Ppx-GppA	0.76
PF13620	CarboxypepD_reg	0.76
PF00440	TetR_N	0.76
PF09527	ATPase_gene1	0.76
PF07228	SpoIIE	0.76
PF03551	PadR	0.76
PF05016	ParE_toxin	0.76
PF00149	Metallophos	0.76
PF08238	Sel1	0.76
PF00072	Response_reg	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	28.03
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	28.03
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	28.03
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	19.70
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	19.70
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	19.70
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	19.70
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	4.55
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.03
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.52
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	0.76
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.76
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.76
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.76
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.76
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.76
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.76
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.79 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.79 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10853455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	521	Open in IMG/M
3300004092\|Ga0062389_103530516	Not Available	586	Open in IMG/M
3300005436\|Ga0070713_100700422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	967	Open in IMG/M
3300005529\|Ga0070741_10005027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	30056	Open in IMG/M
3300005529\|Ga0070741_10809639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	817	Open in IMG/M
3300005529\|Ga0070741_11442131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	570	Open in IMG/M
3300005533\|Ga0070734_10105750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1650	Open in IMG/M
3300005538\|Ga0070731_10041676	All Organisms → cellular organisms → Bacteria	3076	Open in IMG/M
3300005541\|Ga0070733_10235275	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005610\|Ga0070763_10101046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1454	Open in IMG/M
3300009519\|Ga0116108_1165512	Not Available	654	Open in IMG/M
3300009519\|Ga0116108_1253441	Not Available	514	Open in IMG/M
3300009623\|Ga0116133_1056774	Not Available	972	Open in IMG/M
3300009644\|Ga0116121_1008476	All Organisms → cellular organisms → Bacteria	3446	Open in IMG/M
3300009644\|Ga0116121_1077430	Not Available	1041	Open in IMG/M
3300009645\|Ga0116106_1063962	Not Available	1213	Open in IMG/M
3300009645\|Ga0116106_1128048	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300009665\|Ga0116135_1441988	Not Available	533	Open in IMG/M
3300009672\|Ga0116215_1166720	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300009759\|Ga0116101_1057763	Not Available	846	Open in IMG/M
3300009839\|Ga0116223_10559235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300010048\|Ga0126373_10100717	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300010366\|Ga0126379_10467541	Not Available	1326	Open in IMG/M
3300010376\|Ga0126381_100423165	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300010376\|Ga0126381_101312130	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300010401\|Ga0134121_12150036	Not Available	594	Open in IMG/M
3300013308\|Ga0157375_11889799	Not Available	709	Open in IMG/M
3300014155\|Ga0181524_10037401	All Organisms → cellular organisms → Bacteria	3247	Open in IMG/M
3300014164\|Ga0181532_10000032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	140670	Open in IMG/M
3300014165\|Ga0181523_10224270	Not Available	1081	Open in IMG/M
3300014167\|Ga0181528_10652647	Not Available	585	Open in IMG/M
3300014169\|Ga0181531_10050063	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300014199\|Ga0181535_10166673	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300014200\|Ga0181526_10110829	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300014200\|Ga0181526_10305625	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300014492\|Ga0182013_10259703	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300014493\|Ga0182016_10210017	Not Available	1250	Open in IMG/M
3300014495\|Ga0182015_10624411	Not Available	682	Open in IMG/M
3300014657\|Ga0181522_10573002	Not Available	684	Open in IMG/M
3300014658\|Ga0181519_10147806	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300014838\|Ga0182030_10122450	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
3300015206\|Ga0167644_1016225	All Organisms → cellular organisms → Bacteria	3421	Open in IMG/M
3300015206\|Ga0167644_1035867	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300016702\|Ga0181511_1041146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4680	Open in IMG/M
3300016750\|Ga0181505_10134804	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300016750\|Ga0181505_10232784	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300016750\|Ga0181505_10998809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4498	Open in IMG/M
3300017935\|Ga0187848_10182621	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300017946\|Ga0187879_10094043	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300017948\|Ga0187847_10016352	All Organisms → cellular organisms → Bacteria	4697	Open in IMG/M
3300017948\|Ga0187847_10098575	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300017973\|Ga0187780_10334758	Not Available	1067	Open in IMG/M
3300018009\|Ga0187884_10022987	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300018016\|Ga0187880_1420890	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300018021\|Ga0187882_1072816	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300018030\|Ga0187869_10080715	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300018033\|Ga0187867_10043272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2737	Open in IMG/M
3300018034\|Ga0187863_10080660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1831	Open in IMG/M
3300018034\|Ga0187863_10752381	Not Available	551	Open in IMG/M
3300018035\|Ga0187875_10227862	Not Available	1022	Open in IMG/M
3300018038\|Ga0187855_10423840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300018042\|Ga0187871_10443610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300018043\|Ga0187887_10063076	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300018086\|Ga0187769_10438374	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300020583\|Ga0210401_10142408	Not Available	2242	Open in IMG/M
3300021170\|Ga0210400_11282135	Not Available	588	Open in IMG/M
3300021171\|Ga0210405_10133175	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300021181\|Ga0210388_11429215	Not Available	580	Open in IMG/M
3300021401\|Ga0210393_10609184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300021402\|Ga0210385_10248222	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300021403\|Ga0210397_10750198	Not Available	752	Open in IMG/M
3300021405\|Ga0210387_10484295	Not Available	1099	Open in IMG/M
3300021405\|Ga0210387_10849879	Not Available	805	Open in IMG/M
3300021407\|Ga0210383_10149840	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300021477\|Ga0210398_10002406	All Organisms → cellular organisms → Bacteria → Acidobacteria	18310	Open in IMG/M
3300024295\|Ga0224556_1106188	Not Available	687	Open in IMG/M
3300025928\|Ga0207700_12017415	Not Available	504	Open in IMG/M
3300027662\|Ga0208565_1090127	Not Available	932	Open in IMG/M
3300027826\|Ga0209060_10071160	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300027855\|Ga0209693_10630416	Not Available	504	Open in IMG/M
3300027867\|Ga0209167_10737358	Not Available	538	Open in IMG/M
3300027869\|Ga0209579_10020820	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3699	Open in IMG/M
3300027869\|Ga0209579_10189175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1102	Open in IMG/M
3300027889\|Ga0209380_10099122	Not Available	1682	Open in IMG/M
3300028563\|Ga0265319_1273455	Not Available	514	Open in IMG/M
3300028800\|Ga0265338_10023946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6255	Open in IMG/M
3300028808\|Ga0302228_10204828	Not Available	898	Open in IMG/M
3300028906\|Ga0308309_10101618	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300028906\|Ga0308309_10472146	Not Available	1082	Open in IMG/M
3300029944\|Ga0311352_10481825	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300029999\|Ga0311339_10105000	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300031234\|Ga0302325_10041764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9257	Open in IMG/M
3300031234\|Ga0302325_10900604	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300031236\|Ga0302324_100476246	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300031247\|Ga0265340_10026928	Not Available	2902	Open in IMG/M
3300031525\|Ga0302326_12620521	Not Available	629	Open in IMG/M
3300031708\|Ga0310686_104706516	Not Available	1728	Open in IMG/M
3300031708\|Ga0310686_107221394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300031708\|Ga0310686_116775182	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300031788\|Ga0302319_11127418	Not Available	733	Open in IMG/M
3300032770\|Ga0335085_10000600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	97490	Open in IMG/M
3300032770\|Ga0335085_12066943	Not Available	576	Open in IMG/M
3300032783\|Ga0335079_10004082	All Organisms → cellular organisms → Bacteria	16795	Open in IMG/M
3300032783\|Ga0335079_10039312	All Organisms → cellular organisms → Bacteria → Acidobacteria	5429	Open in IMG/M
3300032783\|Ga0335079_10122226	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300032783\|Ga0335079_10275161	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300032783\|Ga0335079_11062095	Not Available	822	Open in IMG/M
3300032783\|Ga0335079_11569318	Not Available	648	Open in IMG/M
3300032783\|Ga0335079_11707083	Not Available	615	Open in IMG/M
3300032805\|Ga0335078_10165775	All Organisms → cellular organisms → Bacteria → Acidobacteria	3109	Open in IMG/M
3300032829\|Ga0335070_10932384	Not Available	803	Open in IMG/M
3300032892\|Ga0335081_10007296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17673	Open in IMG/M
3300032892\|Ga0335081_10089113	All Organisms → cellular organisms → Bacteria	4637	Open in IMG/M
3300032892\|Ga0335081_10251115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2388	Open in IMG/M
3300032892\|Ga0335081_10950392	Not Available	1007	Open in IMG/M
3300032893\|Ga0335069_11363123	Not Available	769	Open in IMG/M
3300032895\|Ga0335074_10006502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16219	Open in IMG/M
3300032895\|Ga0335074_10036774	All Organisms → cellular organisms → Bacteria	6836	Open in IMG/M
3300032896\|Ga0335075_10368973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1549	Open in IMG/M
3300032898\|Ga0335072_10179147	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300032898\|Ga0335072_11137155	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300032898\|Ga0335072_11171807	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300032954\|Ga0335083_11559402	Not Available	500	Open in IMG/M
3300033004\|Ga0335084_10298617	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300033134\|Ga0335073_10036045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6744	Open in IMG/M
3300033134\|Ga0335073_10055150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5291	Open in IMG/M
3300033134\|Ga0335073_11697936	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300033158\|Ga0335077_10424371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1423	Open in IMG/M
3300033158\|Ga0335077_11699820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300033402\|Ga0326728_10000018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	689602	Open in IMG/M
3300033982\|Ga0371487_0348499	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300034163\|Ga0370515_0045434	Not Available	1948	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.97%
Host-Associated	Host-Associated	3.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.42%
Aquatic	Environmental → Aquatic	29.55%
Plants	Host-Associated → Plants	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.09%
Freshwater	Environmental → Aquatic → Freshwater	29.55%
Peat	Environmental → Terrestrial → Peat	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.03%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	22.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.30%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.27%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.27%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108534551	3300001593	Forest Soil	PRIAQRLEDLGFPGDANKDLLVHTLAEIASRSRTFEQQALPLFLSLDPRHRRGLAEVTIALKNHLDAMQDAITDVRSSLSTLTDFLLREEESSSAAS*
Ga0062389_1035305162	3300004092	Bog Forest Soil	KIAHRLTELGFGENALALVLAHSLAEIASRSRTLDQQALPLFLSLDSEHRRSLAEVTVALKNHLDAMQDAIADARPSLTALIDFLAREEG*
Ga0070713_1007004222	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKDSETEYIVELQPQIVARLEALGFTDSAHKDILAHGLAEIASRGRTLDQQALPLFLSLDPQHRRTLAEVTIALKSHLEAMQDSISDVRSSLNALTDFLLREDESSAAGSSINE*
Ga0070741_1000502710	3300005529	Surface Soil	MGDSETEYIVELQPKIAARLQDLGVADDRNRALLVHGLAEIASRSRTFEQQALPLFLSLDGRHRRGLAEVTIALKNHLEAMQDAITDVRPALNAVVDFLLQDEQQ*
Ga0070741_108096391	3300005529	Surface Soil	MADSETEYIVELQPRILQRLQDLGFSDSSNRDLLVHGLAEIASRGRTLDQQALPLFLSLDPRHRRSLAEVTLALKNHLDAIQDSISDVRSSLNALTDFL
Ga0070741_114421311	3300005529	Surface Soil	MPDSETEYIVELQPKIADRLRELNFSQDADVNVLVHGLAEIASRSRTFDQQALPLFLSLDLEHRRALAEVAVALKCHLDAMQDAITDVRPALAALIEVLARQEEP*
Ga0070734_101057502	3300005533	Surface Soil	MGDSETEYIVELQPKIAARLQELGVAEDRNRSLLVHGLAEIASRSRTLEQQALPLFLSLDAQHRRGLAEVTIALKNHLEAMQDAITDVRPALAALVDFLLREEQTG*
Ga0070731_100416763	3300005538	Surface Soil	MRDSETAYIVELQPRIIDRLKTLGFASDGDADVLAHGLAEIAARARTLDEHALPLFLTLDASHRRELAEVTLALKNHLEAMQDSISDVRGALTALADYLLRDEPKQP*
Ga0070733_102352753	3300005541	Surface Soil	LKTLGFASDGDADVLAHGLAEIAARARTLDEHALPLFLTLDASHRRELAEVTLALKNHLESMQDSISDVRGALTALADYLLRDEPKQP*
Ga0070763_101010462	3300005610	Soil	MGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGASPVS*
Ga0116108_11655121	3300009519	Peatland	MADSETEYIVELQPRIAERLNELGFGANAHALILTHSLAEIVSHGRTLDQQALPLFLSLDSKHRRSLAEVTVGLKNHLDAMQDAIADVRSSLNALIDFLARDEG*
Ga0116108_12534412	3300009519	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREES*
Ga0116133_10567741	3300009623	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG*
Ga0116121_10084764	3300009644	Peatland	MADSETEYIVELQPRIAQRLNELGFAENAHALVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREES*
Ga0116121_10774302	3300009644	Peatland	MGDSETEYIVELQPKVAQRLDELGFGANAHALVLAHGLAEIASRSRTLEQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLSREEE*
Ga0116106_10639621	3300009645	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLEAMQDAIADVRPSLNALIDFLAREEG*
Ga0116106_11280483	3300009645	Peatland	DSETEYIVELQPKVAQRLDELGFGANAHALVLAHGLAEIASRSRTLEQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLSREEE*
Ga0116135_14419881	3300009665	Peatland	MMFDSETEYIVELQPRIVQRLNDLGFADLENTGVLAHGLAEIASCGRTLDQQALPLFLSLDAQHRQALAEVTIALKNHLDAMQDSISDVRSALNALTDFLLREEDQAPDAHSINK*
Ga0116215_11667202	3300009672	Peatlands Soil	MADSETEYIVELQPRIAQRLGELGFGGNANAIVLTHSLAEIASRSRTLDHQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREEG*
Ga0116101_10577632	3300009759	Peatland	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIASRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDAIADVRPSLTALIDFLAREEG*
Ga0116223_105592351	3300009839	Peatlands Soil	DSETEYIVELQPRIAQRLGELGFGGNANAIVLTHSLAEIASRSRTLDHQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREEG*
Ga0126373_101007173	3300010048	Tropical Forest Soil	MADSETQYIVELQPRIAERLGALGFGDNAHAAILAHSLAEIVARGRTLEQQALPLFLTLDARHRREMAEVAIALKNHLDGMQDAITDVRSSLAALSDFLVRESAKEQIE*
Ga0126379_104675411	3300010366	Tropical Forest Soil	MSDSETEYIVELQPRIAQRLDELEFTDTAYRDLLIHGLAEIASRSRTLDQQALPLFLSLDPRHRRALAEVTVALKNHLDAMLDTISDTRSALSALTDYLVLDE
Ga0126381_1004231651	3300010376	Tropical Forest Soil	VSDSETEYIVELQPKIAQRLDDLGFTDTAYRDLLVHGLAEIASRGRTLEQQAMPLFLSLDVRHRRSMAEVTVALKNHLDAMLDSITDTRSALSALTDYLVRQEGPPRDPATSSS*
Ga0126381_1013121303	3300010376	Tropical Forest Soil	YIVELQPRIQQRLRELGFAGTAHGDVLVHSLAEIASRSRTLDREALPLFLSLNPQHRRALAEVTVALKNHLDAMQDSITDARSAMTALTNFLLAEADRPQ*
Ga0134121_121500361	3300010401	Terrestrial Soil	MRGIEASAGGSMDDSETNYIVELQPKIAERLDNLGFTDTAYRDLLVHGLAEIASRSRTLDQQAVPLFLSLDARHRRALAEVTVALKNHLDAMMDSISDTRSALSALTDYLLHEEAASADP
Ga0157375_118897992	3300013308	Miscanthus Rhizosphere	MRGIEASAGGSMDDSETNYIVELQPKIAERLDNLGFTDTAYRDLLVHGLAEIASRSRTLDQQAVPLFLSLDARHLRALAEVTVALKNHLDAMMDSISDTRSALSALTDYLLHEEAASADPAAQ*
Ga0181524_100374012	3300014155	Bog	MADSETEYIVELQPRIAQRLNELGFGGNANALILTHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADARSSLNALIDFLAREE*
Ga0181532_1000003239	3300014164	Bog	MFESETEYIVELQPRITQRLDELGFTNSRQASFLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDGMQDAITDLRAPLTELIDFLAREESQP*
Ga0181523_102242701	3300014165	Bog	MADSETEYIVELQPRIAQRLEELGFAGKSDAAVLAHGLAEIASRSRTLDQQALPLFLTLDASHRRSLAEVTVALKNHLDAMQDAITDLRPVLNALIDFLVREEAQP*
Ga0181528_106526471	3300014167	Bog	TEYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLGSQHRRSLAEVTVGLKNHLDAMQDAITDVRSSLNALVDFLAREEE*
Ga0181531_100500632	3300014169	Bog	MADSETEYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVGLKNHLDAMQDAITDVRSSLNALVDFLAREEE*
Ga0181535_101666732	3300014199	Bog	SETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG*
Ga0181526_101108292	3300014200	Bog	YIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG*
Ga0181526_103056251	3300014200	Bog	MMGDSETEYIVELQPKLARRLEELGFNSGGNRDVLVHSLAEIASQSRTFEQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAITDVRPVLNALVDVLLEEQRQK*
Ga0182013_102597031	3300014492	Bog	ELQPRIAQRLDELGFGANAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNDLDAMQDAIADVRPSLNALIDFLAREDG*
Ga0182016_102100171	3300014493	Bog	MADSETEYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLAREEE*
Ga0182015_106244112	3300014495	Palsa	MADSETEYIVELQPRIAQRLKELGFAENAHAIVLTHSLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTELIDFLAREEG*
Ga0181522_105730022	3300014657	Bog	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLAREEE*
Ga0181519_101478061	3300014658	Bog	EYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVGLKNHLDAMQDAITDVRSSLNALVDFLAREEE*
Ga0182030_101224502	3300014838	Bog	MADSETEYIVELQPRIAQRLDELGFGANAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRPSLNALIDFLAREDG*
Ga0167644_10162253	3300015206	Glacier Forefield Soil	MTDSETEYIVELQPRIMQRLEDLGFTDTAYGSILAHGLAEIASRGRTLDQQALPLFLSLAPQHRRALAEVTIALKNHLEAMQDSISDVRSSLSALTDYLLREEGQPPAGSSIDKGES*
Ga0167644_10358672	3300015206	Glacier Forefield Soil	MELQARIAQRLRDLGFGDDAHGAILAHDLAEIAARGRTVDQQALPLFLSLDDRHRRSLAEVTVALKNHLDAIQDSISDVRASLNVLVEFLLKEEEC*
Ga0181511_10411463	3300016702	Peatland	MADSETEYIVELQPRIAQRLNELGFGGNANALILTHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADARSSLNALIDFLAREE
Ga0181505_101348041	3300016750	Peatland	MGDSETEYIVELQPKVAQRLDELGFGANAHALVLAHGLAEIASRSRTLEQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLSREEE
Ga0181505_102327841	3300016750	Peatland	VELQPRIAQRLEELGFAGKSDAAVLAHGLAEIASRSRTLDQQALPLFLTLDASHRRSLAEVTVALKNHLDAMQDAITDLRPVLNALIDFLVREEAQP
Ga0181505_109988094	3300016750	Peatland	MFESETEYIVELQPRITQRLDELGFTNSRQASFLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDGMQDAITDLRAPLTELIDFLAREESQP
Ga0187848_101826212	3300017935	Peatland	MADSETEYIVELQPRIAQRLNELGFAENAHALVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREES
Ga0187879_100940432	3300017946	Peatland	MFDSETEYIVELQPRIVQRLNDLGFADLENTGVLAHGLAEIASCGRTLDQQALPLFLSLDAQHRQALAEVTIALKNHLDAMQDSISDVRSALNALTDFLLREEDQAPDAHSINK
Ga0187847_100163522	3300017948	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG
Ga0187847_100985751	3300017948	Peatland	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIASRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDAIADVRPSLTALIDFLAREEG
Ga0187780_103347582	3300017973	Tropical Peatland	MFDSETQHIVELQPKIISRLNELGFPDTKQAAMLAHSLAEIASRSRTLDRQALPLFLSLDSSHRHSLAELTIALKNHVEGMQDAITDLRAPLTDLIDFLAPEETQP
Ga0187884_100229872	3300018009	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREES
Ga0187880_14208902	3300018016	Peatland	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIAEVRSSLTALIDFLAREES
Ga0187882_10728162	3300018021	Peatland	MADSETEYIVELQPRIAQRLNELGFAENAHALVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIAEVRSSLTALIDFLAREES
Ga0187869_100807152	3300018030	Peatland	MADSETEYIVELQPRIAERLNELGFGANAHALILTHSLAEIVSRGRTLDQQALPLFLSLDSKHRRSLAEVTVGLKNHLDAMQDAIADVRSSLNALIDFLARDEG
Ga0187867_100432722	3300018033	Peatland	MADSETEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRALAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG
Ga0187863_100806602	3300018034	Peatland	MGDSETEYIVELQPKLARRLEELGFNSGGNRDVLVHSLAEIASRSRTFDQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAITDVRPVLNALVDVLLEEQRQK
Ga0187863_107523811	3300018034	Peatland	VELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTLVLKNHLDAMQHAIADTRSSLTALIDFLAREEG
Ga0187875_102278622	3300018035	Peatland	MADSETEYIVELQPKIAQRLNDLGFGENAHALVMTHSLAEIASRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDAIADVRPSLTALIDFLAREEG
Ga0187855_104238402	3300018038	Peatland	GDSETEYIVELQPKLARRLEELGFNSGGNRDVLVHSLAEIASRSRTFDQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAITDVRPVLNALVDVLLEEQRQK
Ga0187871_104436101	3300018042	Peatland	QPKLARRLEELGFNSGGNRDVLVHSLAEIASRSRTFDQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAITDVRPVLNALVDVLLEEQRQK
Ga0187887_100630762	3300018043	Peatland	MADSKTEYIVELQPKIAQRLDELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADTRSSLTALIDFLAREEG
Ga0187769_104383742	3300018086	Tropical Peatland	MGDSETEYIVELQPRISARLDELGLPSDRNRDLLVHGLAEIASRSRTFEQQALPLFLSLDARHRRGLAEVTMALKNHLDAMQDAITDVRPSLAALVDFLLGEEKQT
Ga0210401_101424082	3300020583	Soil	MGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGASPVS
Ga0210400_112821351	3300021170	Soil	MKDSETEYIVELQPRIAERLERLGFSDTAYRDVLVHGLAEVASRSRTLDRQALPLFLTLDHQHRHALAEVTIALKNHLDAMEDSICDVRSSLSALTDFLLRDGDRSSVVE
Ga0210405_101331753	3300021171	Soil	MGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVAVALKNHLDAMQDSISDVRASLMALTDFLLREEGASPVS
Ga0210388_114292151	3300021181	Soil	MDDSETEYIVELQPKITQRLGELRFYDAAHRDLLAHGLAEIASRARTLDQQALPLFLSLDPQHRRSLAEVTVALKNHLDAMQDSISDVRSSLTALTDFLLREEDAP
Ga0210393_106091843	3300021401	Soil	RMGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGASPVS
Ga0210385_102482223	3300021402	Soil	MADSETEYIVELQPKLSRRLEELGFGDSPYRDVLVHGLAELASRSRTLDQQALPLFLSLNASHQRSLAEVTLALKNHLDAMLDSITDTRAALSALADFLLREDEQPK
Ga0210397_107501981	3300021403	Soil	MKDSETEYIVELQPRIAERLERLGFSDTAYRDVLVHGLAEVASRSRTLDRQALPLFLTLDHQHRHALAEVTIALKNHLDAMEDSICDVRSSL
Ga0210387_104842951	3300021405	Soil	MTDSETEYIVELQPQIAQRLKDLGFKEIANRDILAHGLAEIASRGRTLDQQALPLFLSLDAGHRHALAEVTIALKNHLEAMQDSISDVRSSLSALTDFLLREEG
Ga0210387_108498792	3300021405	Soil	MADSETEYIVELQPRIMQRLEDLGFTDTAHSGILAHGLAEIASRGRTLDQQALPLFLSLAPQHRRALAEVTIALKNHLEAMQDSISDVRSSLNVLTDYLLREEG
Ga0210383_101498403	3300021407	Soil	MADSETEYIVELQPKLSRRLEELGFGDSPYGDVLVHGLAELASRSRTLDQQALPLFLSLNASHQRSLAEVTLALKNHLDAMLDSITDTRAALSALADFLLREDEQPK
Ga0210398_1000240617	3300021477	Soil	MSDSETEYIVELQVRLAQRLRDLGFGDDAHGSILAHDLAEIAARSRTLEQQALPLFLSLDHQHRRALAEVTVALKNHLDAIQDSISDVQASLGALTDFLMRE
Ga0224556_11061881	3300024295	Soil	MADSETEYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLNALIDFLAREEE
Ga0207700_120174151	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKDSETEYIVELQPQIVARLEALGFTDSAHKDILAHGLAEIASRGRTLDQQALPLFLSLDPQHRRTLAEVTIALKSHLEAMQDSISDVRSSLNALTDFLLREDESS
Ga0208565_10901272	3300027662	Peatlands Soil	MADSETEYIVELQPRIAQRLGELGFGGNANAIVLTHSLAEIASRSRTLDHQALPLFLSLDSKHRRSLAEVTVALKNHLDAMQDAIADVRSSLTALIDFLAREEG
Ga0209060_100711601	3300027826	Surface Soil	MGDSETEYIVELQPKIAARLQELGVAEDRNRSLLVHGLAEIASRSRTLEQQALPLFLSLDAQHRRGLAEVTIALKNHLEAMQDAITDVRPALAALVDFLLREEQTG
Ga0209693_106304162	3300027855	Soil	KVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGASPVS
Ga0209167_107373581	3300027867	Surface Soil	MRDSETAYIVELQPRIIDRLKTLGFASDGDADVLAHGLAEIAARARTLDEHALPLFLTLDASHRRELAEVTLALKNHLESMQDSISDVR
Ga0209579_100208202	3300027869	Surface Soil	MRDSETAYIVELQPRIIDRLKTLGFASDGDADVLAHGLAEIAARARTLDEHALPLFLTLDASHRRELAEVTLALKNHLEAMQDSISDVRGALTALADYLLRDEPKQP
Ga0209579_101891752	3300027869	Surface Soil	MGDSETEYIVELQPKIAARLQDLGVADDRNRALLVHGLAEIASRSRTFEQQALPLFLSLDGRHRRGLAEVTIALKNHLEAMQDAITDVRPALNAVVDFLLQDEQQ
Ga0209380_100991221	3300027889	Soil	MGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGAS
Ga0265319_12734551	3300028563	Rhizosphere	MFESETEYIVELQPRITQRLSELEFPHMQQATVLAHSLAELASRSRTLDQQALPLFLSLDATHRRALAELAVGLKNHLEGMQDAIADLCAPLAELIDFLAREEEQA
Ga0265338_100239463	3300028800	Rhizosphere	MFESETEYIVELQPRITQRLSELEFPHMQQATVLAHSLAELASRSRTLDQQALPLFLSLDATHRRALAELAVGLKNHLEGMQDAIADLRAPLAELIDFLAREEEQA
Ga0302228_102048282	3300028808	Palsa	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIGSRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDAIADVRPS
Ga0308309_101016181	3300028906	Soil	MGDSETEYIVELQPKVTQRLTELGFNDAEHCNRLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLMALTDFLLREEGASSVS
Ga0308309_104721462	3300028906	Soil	MADSETEYIVELQPKLSRRLEELGFGDSPYRDVLVHGLAELASRSRTLDQQALPLFLSLNASHQRSLAEVTLALKNHLDAMLDSITDTRAALSALADFLLR
Ga0311352_104818251	3300029944	Palsa	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIGSRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNNLDAMQDAIADVRPSLTALIDFLAREEG
Ga0311339_101050003	3300029999	Palsa	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIGSRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDAIADVRPSLTALIDFLAREEG
Ga0302325_100417644	3300031234	Palsa	MADSETEYIVELQPRIAQRLKELGFAENAHAIVLTHSLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVRSSLTELIDFLAREEG
Ga0302325_109006041	3300031234	Palsa	MGDSETEYIVELQPKLARRLEELGFNSGGNRDVLVHSLAEIASQSRTFEQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAITDVRPVLNALVDVLLEEQRQK
Ga0302324_1004762462	3300031236	Palsa	MADSETEYIVELQPKIAQRLNDLGFGENAHALVLTHSLAEIGSRSRTLEQQALPLFLSLASEHRRSLAEVTVALKNHLDAMQDVRPSLTALIDFLAREEG
Ga0265340_100269283	3300031247	Rhizosphere	MFESETEYIVELQPRITQRLSELEFPHMQQATVLAHSLAELASRSRTLDQQALPLFLSLDATHRRALAELTVALKNHLEGMQDAIADLRAPLAELIDFLAREEEQA
Ga0302326_126205212	3300031525	Palsa	MSDSETEYIVELQPRIAQRLNDLGFADTPNSGLLAHGLAEIASRGRTLDQQALPLFLSLDAQHRQALAEVTIALKNHLEAMQDSISDVRSALNALTDFLLRAEEQQPGESSIHK
Ga0310686_1047065161	3300031708	Soil	MFESETEYIVELQPRITQRLNELGFTDARQGGVLAHSLAEIASRSRTLDQQALPLFLALDASRRSSLAEVTIALKNHLEAMQDAITDLRAPLTELIDFLAREGPES
Ga0310686_1072213943	3300031708	Soil	MGDSETEYIVELQPKITQRLCELGFDNAEHRDLMAHGLAEIASRARTLDLQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSISDVRASLTALTDFLLRETDASREA
Ga0310686_1167751822	3300031708	Soil	MADSETAYIVELQPKIAHRLTELGFGENAHALVLAHSLAEIASRSRTLDQQALPLFLSLDSEHRRSLAEVTVALKNHLDAMQDAIADARPSLTALIDFLAREQE
Ga0302319_111274181	3300031788	Bog	MADSETEYIVELQPKIAQRLNELGFGENAHAVVLTHGLAEIASRSRTLDQQALPLFLSLDSQHRRSLAEVTVALKNHLDAMQDAIADVR
Ga0335085_100006003	3300032770	Soil	MDDSETEYIVELQPKISRRLEELGFAGDRMHDVLVHSLAEIASRSRTLEQQALPLFLSLDTRHRRGLAEVTLALKNHLDAIQDAITDVRPALNAFVDFLIRLEAPG
Ga0335085_120669431	3300032770	Soil	MGDSETEYIVELQPRIAARLEEVGFSENGARDVLVHSLAEIASRSRTFEQQALPLFLSLDARHRRGLAEVTVALKNHLDAMQDAISDVRGSLNQLVDFLLREEQG
Ga0335079_100040829	3300032783	Soil	MGDSETEYIVELQPKISRRLEELGFAGDRMHDVLVHSLAEIASRSRTLEQQALPLFLSLDTRHRRGLAEVTLALKNHLDAIQDAITDVRPALNAFVDFLIRLEAPG
Ga0335079_100393123	3300032783	Soil	MGDSETEYIVDLQPKIARRLEELGFAGGRNCDLLVHSLAEIASRSRTLEQQALPLFLSLDASHRRGLAEVAIALKNHLDAMQDAITDVRPSLSALADFLLRDED
Ga0335079_101222262	3300032783	Soil	MDDSETQHIVELQPRIAQRLKELGFGEGAEAVALAHGLAEVTSRSRTLDQQALPLFLSLDDRHRGSLAEVTVALKNHLDAIQDAIADLRPALGALVDFLGRGEG
Ga0335079_102751613	3300032783	Soil	MFESETEYIVELQPRIIQRLNELGFPDAQQATPLAHSLAEIASRSRTLDQQALPLFMSLDASHRRSLAELTVALKNHLDGMQDAITDLRAPLTELIDFLAQDEEKP
Ga0335079_110620952	3300032783	Soil	MFESETEYIVELQPRITQRLSELQFPDAKQATVLAHSLAEIASRSRTLDQQALPLFLSMDASHRRSIAELTVALKNHLEGMQDAITDLRAPLTELIDFLAREEKTSE
Ga0335079_115693181	3300032783	Soil	MFESETEYIVELQPRITQRLNELQFPDAKQATVLAHSLAEIASRSRTLDQQALPLFLSMDASHHRSMAELTVAIKNHLEGMQDAITDLRAPLTE
Ga0335079_117070832	3300032783	Soil	MFESETEYIVELQPRINQRLSDLGFTDARQAAVLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDGMQDAIADLRAPLTELIDLLASEES
Ga0335078_101657753	3300032805	Soil	MRNSIGLCVADCYGEIQLLRRTMFESETEYIVELQPKISQRLNELGFTDARQAATLAHSLAEIASRSRTLDQQALPLFLTLDASRRSSLAELTVALKNHLESMQDAITDLRAPLNELIDFLAREESGA
Ga0335070_109323841	3300032829	Soil	MADSETEYIVELQPRISARLDELGFIDGHHDLLVHSLAEIASRSRTFEQQALPLFLSLDARHRRGLAEVTVALQNHLDAMQDAISDARGALNELVDFLLHEEEH
Ga0335081_1000729617	3300032892	Soil	MFESETEYIVKLQPRITQRLNELGFPDPQQATLLAHSLAEVASRSRTLDQQAIPLFLSLDASHRCSLAELTLALKNHLEGLQDAITDLRVPLTELIDFLAREEIQP
Ga0335081_100891132	3300032892	Soil	MGDSETEYIVELQPRIARRLEELGFATNANAEVLVHGLAELAARSRSFDQQALPLFLSLDAGHRRGLAEVTIAVKNHLDAMQDAITDMRSSLTALVDFLLGEGE
Ga0335081_102511153	3300032892	Soil	MGDSETEYIVELQPRIAQRLDELGFTAGRDLLIHSLAEIASRSRTLDQHALPLFLSLDARHRREMAEVTIALKNHLDAMQDAITDVRPSLSALADFLVREEHS
Ga0335081_109503921	3300032892	Soil	MDDSETLHIVELQPRIAQRLAELGFGENADAAVLAHGLAEVASRGRTLDQQALPLFLSLDDRHRRSLAEVTVALKNHLDAMQDAIADLQPALTALIDFLLKSPWEATWSNVCPPEAG
Ga0335069_113631232	3300032893	Soil	MGDSETEYIVELQPKIAQQMEELGFTGAGRDILVHSLAEIASRSRTLDQQAMPLFLSLDETRRRSLAEVTVALKNHLDAMQDAITDVRPGLNALDLRVG
Ga0335074_100065023	3300032895	Soil	MFDSETEYIVELQPRIVHRLNELRFTDSRQASVLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDAMQDAITDLRAPLTELIDFLARDESAS
Ga0335074_100367742	3300032895	Soil	MGDSETEYIVELQPKIARRLEELGFTGNSAAVLAHSLAELTSRGRTLEQQALPLFLSLDARHRRGLAEVTIALKNHLDAMQDAISDVRAPLSALTDFLLREE
Ga0335075_103689732	3300032896	Soil	MSDSETEYIVELQPKIARRLEELGFTGSNADVLVHSLAELASRCRTFEQQALPLFLSLDARHRRGLAEVTIGLKNHLDAMQDAITDMRAPLSGLTDFLLREE
Ga0335072_101791473	3300032898	Soil	MADSETEYIVELQPKVTNRLTELGFTAAEHCDLLAHGLAEIASRARTLDQQALPLFLSLDPQHRRALAEVTVALKNHLDAMQDSICDVRASLTALTDFLLREEENSRIA
Ga0335072_111371551	3300032898	Soil	LLRRTMFESETEYIVELQPKISQRLNELGFTDARQAATLAHSLAEIASRSRTLDQQALPLFLTLDASRRSSLAELTVALKNHLESMQDAITDLRAPLNELIDFLAREESGA
Ga0335072_111718072	3300032898	Soil	AQRLRNLGFGEDAHGGVLAHDLAEIAARSRTLEQQALPLFLTLDRSHRRSLAEVTVGIKNHLDAISDSIADVRSSLRVLVDFLLREEEKTSNV
Ga0335083_115594021	3300032954	Soil	MFESETEYIVELQPRITQRLNDLEFLDPQQATLLAHSLAEIASRCRTLDQQALPLFLSLDATHRRSLAELTIALKNHLDGMQDAITDLRVPLTELIDFLAREEEKP
Ga0335084_102986171	3300033004	Soil	MFESETEYIVELQPRITQRLNELKFPGAQQAAVLAHSLAEIASRSRTLDQQALPLFLSLDASHHRSLAELTVALKNHLDGMQDAITDLRAPLTDLIEFLARGDAQSEGSSSGLE
Ga0335073_100360453	3300033134	Soil	MGDSETKYIVELQPKITRRLEELGFAAYRNGDVLVHSLAEIASRSRTFEQQALPLFLSLDAQHRRGLAEVTIALKNHLDAMQDAISDVRAALNALVDFLLREEEQP
Ga0335073_100551504	3300033134	Soil	MGDSETEYIVELQPKIGARLDELGLPADRNRDLLVHSLAEIASRSRTFEQQALPLFLSLDAQHRRGLAETTIALKNHLEAMQDTITDVRPALAALVDFLLREESQA
Ga0335073_116979362	3300033134	Soil	MFESETEYIVELQPKISQRLNELGFTDARQAATLAHSLAEIASRSRTLDEQALPLFLTLDASRRSSLAELTVALKNHLESMQDAITDLRAPLNELIDFLAREESGA
Ga0335077_104243712	3300033158	Soil	MDDSETQHIVELQPRIAQRLKELGFGEGAEAVALAHGLAEVTSRSRTLDQQALPLFLSLDDRHRGSLAEVTVALKNHLDAMQDAIADLRPALGALVDFLGRGEG
Ga0335077_116998201	3300033158	Soil	MGDSETEYIVELQPRIARRLDELGFHANGNRDILVHSLAEIASRSRTLDQQALPLFLSLDVRHRRGLAEVTIALKNHLDAMQDAISDVRPALSALVDFLLREQAQ
Ga0326728_10000018484	3300033402	Peat Soil	MFESETEYIVELQPRITQRLNELGFTSSRQASVLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDAMQDAITDLRAPLTELIDFLAREESQP
Ga0371487_0348499_341_652	3300033982	Peat Soil	SETEYIVELQPRITQRLNELGFTSSRQASVLAHSLAEIASRSRTLDQQALPLFLSLDASRRRSLAELTVALKNHLDAMQDAITDLRAPLTELIDFLAREESQP
Ga0370515_0045434_436_783	3300034163	Untreated Peat Soil	MMFDSETEYIVELQPRIVQRLNDLGFADLENTGVLAHGLAEIASCGRTLDQQALPLFLSLDAQHRQALAEVTIALKNHLDAMQDSISDVRSALNALTDFLLREEDQPPDAHSINK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061336

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences