Metagenome / Metatranscriptome Family F061331

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061331
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	60 residues
Representative Sequence	MSERAPAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSGA
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.79 %
% of genes near scaffold ends (potentially truncated)	20.45 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.364 % of family members)
Environment Ontology (ENVO)	Unclassified (29.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.84% β-sheet: 0.00% Coil/Unstructured: 74.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01625	PMSR	12.12
PF00742	Homoserine_dh	11.36
PF13191	AAA_16	3.03
PF01451	LMWPc	3.03
PF03992	ABM	3.03
PF12697	Abhydrolase_6	2.27
PF01243	Putative_PNPOx	1.52
PF00561	Abhydrolase_1	1.52
PF01895	PhoU	1.52
PF00196	GerE	1.52
PF08223	PaaX_C	1.52
PF13411	MerR_1	0.76
PF02687	FtsX	0.76
PF02518	HATPase_c	0.76
PF13424	TPR_12	0.76
PF08448	PAS_4	0.76
PF04978	DUF664	0.76
PF03476	MOSC_N	0.76
PF13602	ADH_zinc_N_2	0.76
PF03551	PadR	0.76
PF02909	TetR_C_1	0.76
PF16177	ACAS_N	0.76
PF13561	adh_short_C2	0.76
PF02604	PhdYeFM_antitox	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	12.12
COG0460	Homoserine dehydrogenase	Amino acid transport and metabolism [E]	11.36
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	1.52
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.76
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.76
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.76
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.36 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.24 %
Unclassified	root	N/A	38.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	13.64 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.06 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.52 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.06 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	6.06 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.30 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.52 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.52 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.06 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	6.06 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.79 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	3.03 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.52 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	1.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.52 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	6.06 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	3.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.79 %
Microbispora bryophytorum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	3.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.52 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.52 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.64 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	6.06 %
Streptomyces sp. NRRL S-1813	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	3.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.79 %
Microbispora bryophytorum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	3.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.52 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.52 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01DAWIT	Not Available	539	Open in IMG/M
2209111022\|2221214095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105240933	Not Available	699	Open in IMG/M
3300004633\|Ga0066395_10144200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	1200	Open in IMG/M
3300005165\|Ga0066869_10057471	Not Available	700	Open in IMG/M
3300005187\|Ga0066675_10168910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1515	Open in IMG/M
3300005332\|Ga0066388_100327041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2179	Open in IMG/M
3300005332\|Ga0066388_103482818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	803	Open in IMG/M
3300005334\|Ga0068869_101339656	Not Available	632	Open in IMG/M
3300005337\|Ga0070682_100074678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2178	Open in IMG/M
3300005434\|Ga0070709_10684795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	796	Open in IMG/M
3300005435\|Ga0070714_101131009	Not Available	763	Open in IMG/M
3300005436\|Ga0070713_100287285	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300005436\|Ga0070713_101104419	Not Available	766	Open in IMG/M
3300005439\|Ga0070711_100873602	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005553\|Ga0066695_10091611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1857	Open in IMG/M
3300005559\|Ga0066700_10820679	Not Available	624	Open in IMG/M
3300005615\|Ga0070702_100973779	Not Available	669	Open in IMG/M
3300005618\|Ga0068864_100238631	Not Available	1684	Open in IMG/M
3300005713\|Ga0066905_100211943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1458	Open in IMG/M
3300005713\|Ga0066905_100825563	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005764\|Ga0066903_101400043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1314	Open in IMG/M
3300005764\|Ga0066903_101495330	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005764\|Ga0066903_102013907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1109	Open in IMG/M
3300005843\|Ga0068860_100729077	Not Available	1002	Open in IMG/M
3300006028\|Ga0070717_11302724	Not Available	660	Open in IMG/M
3300006046\|Ga0066652_101792770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	555	Open in IMG/M
3300006163\|Ga0070715_10013483	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300006358\|Ga0068871_100335269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	1335	Open in IMG/M
3300006606\|Ga0074062_13007528	Not Available	832	Open in IMG/M
3300006806\|Ga0079220_10115408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	1421	Open in IMG/M
3300006845\|Ga0075421_102805878	Not Available	501	Open in IMG/M
3300006954\|Ga0079219_10830728	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300007076\|Ga0075435_100458434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1100	Open in IMG/M
3300009098\|Ga0105245_11726164	Not Available	678	Open in IMG/M
3300009137\|Ga0066709_103733421	Not Available	553	Open in IMG/M
3300009553\|Ga0105249_13206284	Not Available	526	Open in IMG/M
3300009792\|Ga0126374_10137386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300009792\|Ga0126374_11468046	Not Available	558	Open in IMG/M
3300010043\|Ga0126380_10160875	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300010046\|Ga0126384_10032258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3489	Open in IMG/M
3300010048\|Ga0126373_12314579	Not Available	598	Open in IMG/M
3300010154\|Ga0127503_10229876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1640	Open in IMG/M
3300010154\|Ga0127503_11163041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	585	Open in IMG/M
3300010358\|Ga0126370_10162285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	1644	Open in IMG/M
3300010360\|Ga0126372_10033690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3258	Open in IMG/M
3300010361\|Ga0126378_11627264	Not Available	733	Open in IMG/M
3300010366\|Ga0126379_12949721	Not Available	569	Open in IMG/M
3300010371\|Ga0134125_11726797	Not Available	681	Open in IMG/M
3300010373\|Ga0134128_10742740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1089	Open in IMG/M
3300010375\|Ga0105239_13301049	Not Available	525	Open in IMG/M
3300010376\|Ga0126381_102520895	Not Available	737	Open in IMG/M
3300010397\|Ga0134124_10257338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1608	Open in IMG/M
3300010398\|Ga0126383_10488942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1287	Open in IMG/M
3300010400\|Ga0134122_11198281	Not Available	760	Open in IMG/M
3300011119\|Ga0105246_10924394	Not Available	784	Open in IMG/M
3300012198\|Ga0137364_10039861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3064	Open in IMG/M
3300012198\|Ga0137364_11270875	Not Available	549	Open in IMG/M
3300012198\|Ga0137364_11458895	Not Available	505	Open in IMG/M
3300012200\|Ga0137382_10097390	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300012200\|Ga0137382_10577533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300012201\|Ga0137365_10010954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7161	Open in IMG/M
3300012202\|Ga0137363_10546091	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012206\|Ga0137380_11418605	Not Available	579	Open in IMG/M
3300012207\|Ga0137381_11710644	Not Available	519	Open in IMG/M
3300012211\|Ga0137377_11741437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300012925\|Ga0137419_11803165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300012958\|Ga0164299_10979246	Not Available	621	Open in IMG/M
3300012960\|Ga0164301_10511350	Not Available	868	Open in IMG/M
3300012960\|Ga0164301_11572204	Not Available	544	Open in IMG/M
3300012984\|Ga0164309_10299645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	1158	Open in IMG/M
3300012985\|Ga0164308_12261631	Not Available	506	Open in IMG/M
3300012986\|Ga0164304_10068380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2007	Open in IMG/M
3300012987\|Ga0164307_10607326	Not Available	844	Open in IMG/M
3300013296\|Ga0157374_10438831	Not Available	1306	Open in IMG/M
3300016270\|Ga0182036_11575937	Not Available	553	Open in IMG/M
3300016294\|Ga0182041_10681956	Not Available	910	Open in IMG/M
3300016422\|Ga0182039_10869048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	804	Open in IMG/M
3300017966\|Ga0187776_10162926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1379	Open in IMG/M
3300017966\|Ga0187776_10315803	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300017966\|Ga0187776_10620452	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300017974\|Ga0187777_10719381	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300017999\|Ga0187767_10016298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1547	Open in IMG/M
3300017999\|Ga0187767_10243868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300018060\|Ga0187765_10205446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1140	Open in IMG/M
3300018060\|Ga0187765_10803725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300018064\|Ga0187773_10804741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	598	Open in IMG/M
3300018433\|Ga0066667_11536196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300021420\|Ga0210394_10069173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3061	Open in IMG/M
3300021478\|Ga0210402_11801419	Not Available	538	Open in IMG/M
3300021560\|Ga0126371_10086697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3086	Open in IMG/M
3300021560\|Ga0126371_11057392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300021560\|Ga0126371_11422621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	824	Open in IMG/M
3300021560\|Ga0126371_11476330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	809	Open in IMG/M
3300024181\|Ga0247693_1072103	Not Available	518	Open in IMG/M
3300025898\|Ga0207692_10183224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	1221	Open in IMG/M
3300025906\|Ga0207699_10357318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1032	Open in IMG/M
3300025915\|Ga0207693_11128649	Not Available	594	Open in IMG/M
3300025915\|Ga0207693_11172509	Not Available	580	Open in IMG/M
3300025916\|Ga0207663_10007265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	5733	Open in IMG/M
3300025921\|Ga0207652_10702608	Not Available	902	Open in IMG/M
3300025928\|Ga0207700_10508891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1066	Open in IMG/M
3300025928\|Ga0207700_10715394	Not Available	894	Open in IMG/M
3300025939\|Ga0207665_10290549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	1219	Open in IMG/M
3300027787\|Ga0209074_10178327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → Microbispora bryophytorum	784	Open in IMG/M
3300030916\|Ga0075386_11183691	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031543\|Ga0318516_10257726	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1009	Open in IMG/M
3300031544\|Ga0318534_10482393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	709	Open in IMG/M
3300031682\|Ga0318560_10303292	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300031720\|Ga0307469_10114919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1931	Open in IMG/M
3300031771\|Ga0318546_10413283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300031781\|Ga0318547_10030837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2755	Open in IMG/M
3300031831\|Ga0318564_10329092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	672	Open in IMG/M
3300031897\|Ga0318520_10863642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	569	Open in IMG/M
3300032043\|Ga0318556_10233476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	959	Open in IMG/M
3300032174\|Ga0307470_10414116	Not Available	957	Open in IMG/M
3300032180\|Ga0307471_100173751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2114	Open in IMG/M
3300032770\|Ga0335085_10054650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5372	Open in IMG/M
3300032770\|Ga0335085_12063783	Not Available	577	Open in IMG/M
3300032782\|Ga0335082_10011241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9717	Open in IMG/M
3300032783\|Ga0335079_10145607	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300032783\|Ga0335079_11707727	Not Available	615	Open in IMG/M
3300032783\|Ga0335079_11725484	Not Available	611	Open in IMG/M
3300032805\|Ga0335078_10124362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3686	Open in IMG/M
3300032805\|Ga0335078_11484113	Not Available	759	Open in IMG/M
3300032828\|Ga0335080_10393616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1488	Open in IMG/M
3300032828\|Ga0335080_10508555	Not Available	1278	Open in IMG/M
3300032828\|Ga0335080_10813084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300032954\|Ga0335083_10297541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-1813	1419	Open in IMG/M
3300032955\|Ga0335076_10991077	Not Available	723	Open in IMG/M
3300033158\|Ga0335077_10019497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8498	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.15%
Plants	Host-Associated → Plants	8.33%
Aquatic	Environmental → Aquatic	1.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.27%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.27%
Loam	Environmental → Terrestrial → Soil → Loam	19.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_03105940	2189573000	Grass Soil	MSERAPAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGSG
2222056180	2209111022	Grass Soil	MSEQAPTPGSPGDEPNNESGGLDDAREAALMREVLREQEQHREGGVEPGLDDPDTQTGSN
INPhiseqgaiiFebDRAFT_1052409333	3300000364	Soil	MSERAPAPGSPGDEPNGEPGALDDTHEAALMREVLRAQEQHREGGVEPGLDDPDTPAGSGA*
Ga0066395_101442001	3300004633	Tropical Forest Soil	MSERPPVPGSPGNQPNDEPGEMDDAREAALMREVLREQEQHREGGIEPGLEDPDAPTGSNA*
Ga0066869_100574711	3300005165	Soil	MSERAPAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSGA*
Ga0066675_101689104	3300005187	Soil	MSERAPAPGSSGDERNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTDSGA*
Ga0066388_1003270413	3300005332	Tropical Forest Soil	MSERAPAPDSPGDEPNGEPGALDDAHEAALMREVLREQEQHREGGVEPGLDDPDTPAGPSA*
Ga0066388_1034828181	3300005332	Tropical Forest Soil	PGSPGNQPNDEPGEMDDAREAALMREVLREQEQHREGGIEAGLEDPDTPTGSNA*
Ga0068869_1013396561	3300005334	Miscanthus Rhizosphere	MSERAPVPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0070682_1000746782	3300005337	Corn Rhizosphere	MSERAPVPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0070709_106847951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0070714_1011310091	3300005435	Agricultural Soil	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0070713_1002872853	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPGGSSA*
Ga0070713_1011044192	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQT
Ga0070711_1008736022	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPAGSDA*
Ga0066695_100916111	3300005553	Soil	MSERAPTPGSPGDEPSNESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDTQTGSNA*
Ga0066700_108206791	3300005559	Soil	MSERAPTPGSPGDEPSNESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDTPTGSNA*
Ga0070702_1009737792	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPEDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0068864_1002386313	3300005618	Switchgrass Rhizosphere	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0066905_1002119432	3300005713	Tropical Forest Soil	MSERAPAPGSSGDEPNGEPGALDDAQEAALMREVLREQEQHREGGVEPGLDDPGTPAGPGA*
Ga0066905_1008255632	3300005713	Tropical Forest Soil	MSEPTPAPGNPGDEPKDAPGALDDEREAALMREVLREQEQHREGGIEPGLEEPDPQTGPNP*
Ga0066903_1014000432	3300005764	Tropical Forest Soil	MSERAPAPGSSGDEPNDDPGALGDAREAALMREVLREQEQHREGGVEPGLDDPDTPAGSSA*
Ga0066903_1014953302	3300005764	Tropical Forest Soil	MSERAPTPGSPGAEPNDESGGMDDAREAALMREVLREQEQHREGGVEPGLDESGPPAGSGGSAE*
Ga0066903_1020139072	3300005764	Tropical Forest Soil	MSERAPAPGSPGDEPSDEPGAMDDAREAALMREVLREQEQHREGGVEPGLEEPDAPNGSNA*
Ga0068860_1007290772	3300005843	Switchgrass Rhizosphere	MSERAPAPDSPGDQPKEEPGALDDAREAGLMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0070717_113027242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGGVEPGL
Ga0066652_1017927702	3300006046	Soil	MSERAPAPGNSGDEPNGEPGALDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTDSGA*
Ga0070715_100134832	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPKEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0068871_1003352691	3300006358	Miscanthus Rhizosphere	MSERAPAPDSPGDQPKEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPDA*
Ga0074062_130075282	3300006606	Soil	MSERAPAPDSPGDQPEDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSGA*
Ga0079220_101154082	3300006806	Agricultural Soil	MSERAPVPDSPGDQSKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0075421_1028058781	3300006845	Populus Rhizosphere	MSERAPAPDSPGDQPHDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0079219_108307282	3300006954	Agricultural Soil	MSERAPAPGNSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPAGSNA*
Ga0075435_1004584341	3300007076	Populus Rhizosphere	MSERAPAPDSPGDQPHDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPAGSDA*
Ga0105245_117261642	3300009098	Miscanthus Rhizosphere	APAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0066709_1037334211	3300009137	Grasslands Soil	MSERAPTPGSPGDEPNNESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDTQTGSNA*
Ga0105249_132062842	3300009553	Switchgrass Rhizosphere	MSERAPAPDSPGDQPQDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0126374_101373862	3300009792	Tropical Forest Soil	MSERAPAPGGPGDEPSDEPGATDDASEAALMRQVLREQEQHREGGVEPGLDESGPPAGSGGSAE*
Ga0126374_114680462	3300009792	Tropical Forest Soil	MSERAPAPGNSGDEPNDAPGALDDEREAALMREVLREQEQHREGGIEPGLEEPDPQTGPNP*
Ga0126380_101608752	3300010043	Tropical Forest Soil	MSERAPAPGNSGDEPNDAPGALDDEREAALMREVLREQEQHREGGIEPGLEEPDPQTGSNP*
Ga0126384_100322582	3300010046	Tropical Forest Soil	MSERAPAPGSSGDEPNGEPGAQDDAREAALMREVLREQERHREGGVEPGLDEPDPQTGPNA*
Ga0126373_123145791	3300010048	Tropical Forest Soil	MSERAPAPGGPGDEPSDEPSATDDASEAALMRQVLREQEEHREGGVEPGLDESGPPADSGGSAE*
Ga0127503_102298763	3300010154	Soil	MSERAPAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGSGA*
Ga0127503_111630411	3300010154	Soil	AQPGREEDLTMSERAPAPGSSGDEPNGERGALDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTGSDA*
Ga0126370_101622853	3300010358	Tropical Forest Soil	MSEQAPAPGSSGDKPNGEPGAQDDAREAALMREVLREQERHREGGVEPGLDEPEPQTGPNA*
Ga0126372_100336903	3300010360	Tropical Forest Soil	MSEQAPAPGSSGDKPNGEPGAQDDAREAALMREVLREQERHREGGVEPGLDEPGSQTGPNA*
Ga0126378_116272642	3300010361	Tropical Forest Soil	MSERAPAPGSPGDEPNDEPGAMDDASEAALMRQVLREQEQHREGGVEPGLDEPGSPAGSDGPAE*
Ga0126379_129497212	3300010366	Tropical Forest Soil	MSERAPAPGNSGDEPNDAPGALDDEREAALMREVLREQEQHREGGIEPGLEEPDPHTGPNP*
Ga0134125_117267972	3300010371	Terrestrial Soil	MSERAPAPDSPGDQPQDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDS
Ga0134128_107427401	3300010373	Terrestrial Soil	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGAVEPVLDEPDSQT
Ga0105239_133010491	3300010375	Corn Rhizosphere	MSERAPAPDSSGDQPQDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0126381_1025208951	3300010376	Tropical Forest Soil	MSERAPAPGGPGDEPSDEPGATDDASEAALMRQVLREQEQHREGGVEPGLDEPGSPAGSDGTAE*
Ga0134124_102573383	3300010397	Terrestrial Soil	MSERAPAPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0126383_104889422	3300010398	Tropical Forest Soil	MSERAPAPGSSGDKPDDEPGALDDAREAALMREVLRAQEQHREGGVEPGLDDPDTQTESGA*
Ga0134122_111982812	3300010400	Terrestrial Soil	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA*
Ga0105246_109243942	3300011119	Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDDPDSPTRPGA*
Ga0137364_100398613	3300012198	Vadose Zone Soil	MSERAPTPGSPGDEPNDESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTGSDA*
Ga0137364_112708751	3300012198	Vadose Zone Soil	MSERAPAPGSSGDERNDEPGGLDDAREAALMREGLREQEQHREGGVEPGLDDPDPQTDSGA*
Ga0137364_114588951	3300012198	Vadose Zone Soil	PAPGSSGDEPDDEPGALDDDAREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA*
Ga0137382_100973902	3300012200	Vadose Zone Soil	MSERAPAPGSSGDEPDDEPGALDDDAREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA*
Ga0137382_105775332	3300012200	Vadose Zone Soil	SDMSERAPTPGSPGDEPNDESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTGSDA*
Ga0137365_100109543	3300012201	Vadose Zone Soil	MSERAPTPGSPGDEPNDESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDAQTGSNA*
Ga0137363_105460911	3300012202	Vadose Zone Soil	MSERAPAPGSSGDEPDDETGALNDDAREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA*
Ga0137380_114186051	3300012206	Vadose Zone Soil	MSERAPTPGSPGDEPSNESGELDDAREAALMREVLREQQQHREGGVEPGLDDPDTQTGSNA*
Ga0137381_117106442	3300012207	Vadose Zone Soil	MSERAPTPGSPGDEPNDESGELDDAREAALMREVLREQEQHREGGVEPGLDDPDTQTGSNA*
Ga0137377_117414371	3300012211	Vadose Zone Soil	MSERAPAPGSSGDEPDDEPGAPDDDAREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA*
Ga0137419_118031651	3300012925	Vadose Zone Soil	MSERAPAPGSSGDEPDDEPGALDDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTGSDA*
Ga0164299_109792462	3300012958	Soil	MSERAPAPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSGA*
Ga0164301_105113501	3300012960	Soil	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQSGSDA*
Ga0164301_115722041	3300012960	Soil	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA*
Ga0164309_102996452	3300012984	Soil	MSERAPAPGSSGDKPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPGGSS
Ga0164308_122616311	3300012985	Soil	GGSDMSERAPAPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQSGSDA*
Ga0164304_100683803	3300012986	Soil	MNERAPAPDSPGDQPHDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQSGSDA*
Ga0164307_106073261	3300012987	Soil	MSERAPAPDSPGDQPEDEPGELDDAREAALMREVLREQEQHREGGVEPGLDEPDSQSGSDA*
Ga0157374_104388311	3300013296	Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPGA*
Ga0182036_115759371	3300016270	Soil	MSERAPTPGDPGNEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSN
Ga0182041_106819561	3300016294	Soil	PAPGSSGNEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDDPDTPAGSNA
Ga0182039_108690481	3300016422	Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSS
Ga0187776_101629262	3300017966	Tropical Peatland	MSERAPTPGSPGNEPNDEPGGMDDAREAALMREVLREQEQHREGGVEPGLDDPDTPTGSS
Ga0187776_103158032	3300017966	Tropical Peatland	MNERAPAPGSSGDEPNGEPGALDDAHEAALMREVLREQEQHREGGVEPGLDDPDTPAGPS
Ga0187776_106204521	3300017966	Tropical Peatland	GLTMSERAPAPGNSGDEPSDEPGALGDAREAALMREVLREQEQHREGGVEPGLDDPDTPAGSSA
Ga0187777_107193811	3300017974	Tropical Peatland	MSERAPAPGRSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGL
Ga0187767_100162982	3300017999	Tropical Peatland	MSEQAPASGSPSDKPNDEPGALDDAREAELMREVLREQEQHREGGVEPGLDDPDTQAGPD
Ga0187767_102438681	3300017999	Tropical Peatland	MSERAPTPGSPGDEPNDEPGEMDDAHEAALMREVLREQEQHREGGVEPGLEDPGTQTGPD
Ga0187767_103246572	3300017999	Tropical Peatland	MSEREQAPGRGGEPGKDADALDEAHEAALMREVMREQEEHREGGVEPGLDDGDTAAEPG
Ga0187765_102054461	3300018060	Tropical Peatland	MSERTPAPGSSGDEPNGEAGGLDDAGEAAMMRQVLREQEQHREGGVEPGLDDAGTDPAPD
Ga0187765_108037252	3300018060	Tropical Peatland	MSERAPTPGSPGDEPNDEPGEMDDAHEAALMREVLREQEQHREGGVEPGLEDPGTRTGPD
Ga0187773_108047411	3300018064	Tropical Peatland	SPGNEPNDEPGGMDDAREAALMREVLREQEQHREGGVEPGLDDPDTPTGSSA
Ga0066667_115361961	3300018433	Grasslands Soil	MSERAPAPGSSGDEPDDEPGALDDDAREAALMREVLREQEQHREGGVEPGLDDPDPQSGSDA
Ga0210394_100691733	3300021420	Soil	MNERAPAPGSSGDKPNGEPGALDDEHEAALMREVLREQEQHREGGVEPGLDDPDTPAGSS
Ga0210402_118014191	3300021478	Soil	MSERAPAPGSSGDKPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDDPDTPAGSG
Ga0126371_100866975	3300021560	Tropical Forest Soil	MSERAPTPGSPGAEPNDERGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSN
Ga0126371_110573922	3300021560	Tropical Forest Soil	MSEREQTPGGTGGEPGQDADELDAAHEAALMREVMREQEEHREGGVEPGLDGGNG
Ga0126371_114226211	3300021560	Tropical Forest Soil	MSERPPAPGSPGNQPNDEPGEMDDAREAALMREVLREQEQHREGGIEAGLEDPDTPTGSN
Ga0126371_114763302	3300021560	Tropical Forest Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLEDPDAQTGSN
Ga0247693_10721031	3300024181	Soil	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDTPAGSD
Ga0207692_101832241	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPVPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLDEP
Ga0207699_103573181	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTG
Ga0207693_111286491	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPQEEPGALDDAREAALMREVLREQEQHREGGVEPGLD
Ga0207693_111725092	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPVPDSPGDQPKDESGALDDAREAALMREVLREQEQHREGGVEPGLD
Ga0207663_100072658	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPG
Ga0207652_107026081	3300025921	Corn Rhizosphere	APAPDSPGDQPQDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGPGA
Ga0207700_105088912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPGGSS
Ga0207700_107153941	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQPALAPNRRSGDLLA
Ga0207665_102905492	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDS
Ga0209074_101783273	3300027787	Agricultural Soil	MSERAPAPGSSGDEPNGEPGALDDEREAALMREVLREQEQHREGGVEPGLDEPDSPAGSD
Ga0075386_111836912	3300030916	Soil	PAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGSGA
Ga0318516_102577262	3300031543	Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSN
Ga0318534_104823932	3300031544	Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPAGSN
Ga0318560_103032922	3300031682	Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGIEPGLQDPDTPPGST
Ga0307469_101149192	3300031720	Hardwood Forest Soil	MSERAPAPDSPGDQPNDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSPTGPG
Ga0318546_104132833	3300031771	Soil	MSERAPTPGSPGSEPKGESGEMDDAREAALMREVLREQEQHREGGIEPGLQDPDTPPGST
Ga0318547_100308376	3300031781	Soil	SAPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSNA
Ga0318564_103290921	3300031831	Soil	MSERAPTPGSPGAEPNDESGEMDDAREAALMREVLREQEQHREGGVEPG
Ga0318520_108636422	3300031897	Soil	MSERAPTPGSPGSEPNDESGEMDDAREAALMREVLREQEQHREGGIEPGLQDPDTPPGST
Ga0318556_102334762	3300032043	Soil	MSERAPTPGSPGSEPNDESGEMDDAREAALMREVLREQEQHREGGVEPGLQDPDTPTGSN
Ga0307470_104141162	3300032174	Hardwood Forest Soil	MSERAPAPDSPGDQPKDEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSG
Ga0307471_1001737513	3300032180	Hardwood Forest Soil	MSERAPAPDSPGDQPKEEPGALDDAREAALMREVLREQEQHREGGVEPGLDEPDSQTGSG
Ga0335085_100546506	3300032770	Soil	MSEQAPASGSPSDKPNDEPGTLDDAREAELMREVLREQEQHREGGVEPGLDDPDTQAGPD
Ga0335085_120637831	3300032770	Soil	MSERAPAPGSSGDEPNGEPGALDDAHEAALMREVLRAQEEHREGGVEPGLDDPDAPAGSN
Ga0335082_100112419	3300032782	Soil	MSEQAPASGSPSDKPNDEPGTLDDAREAELMREVLREQEQHREGGVEPGLDDPDTQAGPDTKPAPPPAGKAWL
Ga0335079_101456071	3300032783	Soil	MSERAPAPGNSGDEPDGEPGALDDAREAALMREVLREQEQHREGGVEPGLEDPGTQTGPG
Ga0335079_117077272	3300032783	Soil	MSERAPTPGSPGDEPNDEPGEMDDAHEAALMREVLREQEQHREGGVEPGLEDPGTQTGPG
Ga0335079_117254841	3300032783	Soil	MSERAPAPDSPGDQPNDEPGALDDAHEAALMREVLREQEQHREGGVEPALDEPDSPTGSG
Ga0335078_101243622	3300032805	Soil	MSERAAAPDGSGDKPDDEPGTMDDAHEAALMREMLRAQEQHREGGVEPGLDDQDSQAGPS
Ga0335078_114841133	3300032805	Soil	MSERAPAPGNSGDEPDGEPGALDDAREAALMREVLREQEQHREGGVEPGLDDPDPQPGSD
Ga0335080_103936161	3300032828	Soil	MSERAPTPGSPGDEPNDEPGEMDDAHEAALMREVLREQEQHREGGVEPGLEDPGTQTG
Ga0335080_105085551	3300032828	Soil	DGSGDKPDDEPGTMDDAHEAALMREMLRAQEQHREGGVEPGLDDQDSQAGPSA
Ga0335080_108130842	3300032828	Soil	MSEQAPASGSPSDKPNDEPGALDDAREAELMREVLREQEQHREGGVEPGLDDPDTQAGPH
Ga0335083_102975411	3300032954	Soil	MSERAPAPGSSGDEPNGEPGALDDAHEAALMREVLREQEQHREGGVEPGLDNPDTPAGPS
Ga0335076_109910772	3300032955	Soil	MSERAPTPGSPGDEPNDEPGEMDDAHEAALMREVLREQEQHREGGVEPGLDDPDTPPGPS
Ga0335077_100194975	3300033158	Soil	MSERAPAPGNSGDEPDGEPGALDDAREAALMREVLREQEQHREGGVEPGLDDPDPQTGSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061331

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences