Metagenome / Metatranscriptome Family F061330

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061330
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	64 residues
Representative Sequence	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ
Number of Associated Samples	70
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.56 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	88.64 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (28.788 % of family members)
Environment Ontology (ENVO)	Unclassified (46.212 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.58% β-sheet: 20.88% Coil/Unstructured: 61.54%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF14022	DUF4238	2.27
PF13356	Arm-DNA-bind_3	1.52
PF04226	Transgly_assoc	1.52
PF07045	DUF1330	1.52
PF00589	Phage_integrase	1.52
PF01066	CDP-OH_P_transf	1.52
PF13505	OMP_b-brl	1.52
PF13414	TPR_11	0.76
PF04317	DUF463	0.76
PF00239	Resolvase	0.76
PF03721	UDPG_MGDP_dh_N	0.76
PF10090	HPTransfase	0.76
PF01799	Fer2_2	0.76
PF13417	GST_N_3	0.76
PF12072	RNase_Y_N	0.76
PF00884	Sulfatase	0.76
PF12973	Cupin_7	0.76
PF13924	Lipocalin_5	0.76
PF13467	RHH_4	0.76
PF02265	S1-P1_nuclease	0.76
PF17201	Cache_3-Cache_2	0.76
PF00378	ECH_1	0.76
PF07859	Abhydrolase_3	0.76
PF12883	DUF3828	0.76
PF03797	Autotransporter	0.76
PF04392	ABC_sub_bind	0.76
PF11146	DUF2905	0.76
PF05402	PqqD	0.76
PF03401	TctC	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	1.52
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	1.52
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.52
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	1.52
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.52
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.76
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.76
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	18.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.12 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.76 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.76 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.76 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.76 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.76 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.76 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.76 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	0.76 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.76 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.76 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Anaeromyxobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	0.76 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.76 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	0.76 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.76 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16620511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
2088090014\|GPIPI_17393505	All Organisms → cellular organisms → Bacteria → Proteobacteria	2351	Open in IMG/M
2228664022\|INPgaii200_c0689964	Not Available	668	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101539599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2643	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101947364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1085	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1004251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2315	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1089995	Not Available	538	Open in IMG/M
3300000955\|JGI1027J12803_101052296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300000955\|JGI1027J12803_106590459	Not Available	926	Open in IMG/M
3300001867\|JGI12627J18819_10323111	Not Available	623	Open in IMG/M
3300004479\|Ga0062595_100366949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1012	Open in IMG/M
3300004479\|Ga0062595_101009268	Not Available	716	Open in IMG/M
3300004479\|Ga0062595_101829318	Not Available	578	Open in IMG/M
3300005179\|Ga0066684_10121315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300005332\|Ga0066388_100334954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2159	Open in IMG/M
3300005332\|Ga0066388_100386283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2046	Open in IMG/M
3300005332\|Ga0066388_100540421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1796	Open in IMG/M
3300005332\|Ga0066388_101302465	Not Available	1253	Open in IMG/M
3300005332\|Ga0066388_101690654	Not Available	1119	Open in IMG/M
3300005332\|Ga0066388_102645523	Not Available	915	Open in IMG/M
3300005332\|Ga0066388_103448305	Not Available	807	Open in IMG/M
3300005332\|Ga0066388_104105431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	742	Open in IMG/M
3300005332\|Ga0066388_105338585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300005332\|Ga0066388_106696361	Not Available	580	Open in IMG/M
3300005332\|Ga0066388_106928773	Not Available	570	Open in IMG/M
3300005332\|Ga0066388_106997384	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300005332\|Ga0066388_107048090	Not Available	565	Open in IMG/M
3300005339\|Ga0070660_101185023	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300005435\|Ga0070714_100023329	All Organisms → cellular organisms → Bacteria → Proteobacteria	5081	Open in IMG/M
3300005435\|Ga0070714_100889025	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005435\|Ga0070714_101096276	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300005436\|Ga0070713_100162521	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300005436\|Ga0070713_100774939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300005437\|Ga0070710_10055684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2236	Open in IMG/M
3300005451\|Ga0066681_10965642	Not Available	509	Open in IMG/M
3300005560\|Ga0066670_10137945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300005713\|Ga0066905_100217229	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300005764\|Ga0066903_100065661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4586	Open in IMG/M
3300005764\|Ga0066903_100866498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300005764\|Ga0066903_101092671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1469	Open in IMG/M
3300005764\|Ga0066903_101255081	Not Available	1380	Open in IMG/M
3300005764\|Ga0066903_101339657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1340	Open in IMG/M
3300005764\|Ga0066903_101855122	Not Available	1153	Open in IMG/M
3300005764\|Ga0066903_102140840	Not Available	1077	Open in IMG/M
3300005764\|Ga0066903_102636581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	974	Open in IMG/M
3300005764\|Ga0066903_103207563	Not Available	884	Open in IMG/M
3300005764\|Ga0066903_103450485	Not Available	852	Open in IMG/M
3300005764\|Ga0066903_103836894	Not Available	807	Open in IMG/M
3300005764\|Ga0066903_103961140	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300005764\|Ga0066903_104088109	Not Available	782	Open in IMG/M
3300005764\|Ga0066903_104190358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300005764\|Ga0066903_104300425	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005764\|Ga0066903_104755061	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_105147815	Not Available	692	Open in IMG/M
3300005764\|Ga0066903_106777831	Not Available	595	Open in IMG/M
3300005764\|Ga0066903_106881839	Not Available	590	Open in IMG/M
3300005764\|Ga0066903_107142542	Not Available	578	Open in IMG/M
3300005764\|Ga0066903_107413048	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_108205135	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_108387529	Not Available	528	Open in IMG/M
3300006163\|Ga0070715_10028137	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300006173\|Ga0070716_100050927	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300006175\|Ga0070712_100626059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300006755\|Ga0079222_10658476	Not Available	817	Open in IMG/M
3300006755\|Ga0079222_12434234	Not Available	525	Open in IMG/M
3300006794\|Ga0066658_10505099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300006796\|Ga0066665_10931885	Not Available	670	Open in IMG/M
3300006806\|Ga0079220_10223539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300006845\|Ga0075421_100720536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300006847\|Ga0075431_100647005	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300006854\|Ga0075425_101253506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300006854\|Ga0075425_101275037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300006871\|Ga0075434_100614793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1106	Open in IMG/M
3300006871\|Ga0075434_101324161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	731	Open in IMG/M
3300006871\|Ga0075434_101869077	Not Available	607	Open in IMG/M
3300006904\|Ga0075424_100506965	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300006904\|Ga0075424_101022666	Not Available	881	Open in IMG/M
3300006904\|Ga0075424_102164020	Not Available	586	Open in IMG/M
3300006954\|Ga0079219_12097643	Not Available	541	Open in IMG/M
3300009100\|Ga0075418_12026667	Not Available	627	Open in IMG/M
3300009156\|Ga0111538_11851675	Not Available	759	Open in IMG/M
3300009162\|Ga0075423_11629594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300009792\|Ga0126374_10587312	Not Available	820	Open in IMG/M
3300010046\|Ga0126384_10671018	Not Available	915	Open in IMG/M
3300010046\|Ga0126384_11490571	Not Available	633	Open in IMG/M
3300010048\|Ga0126373_10660063	Not Available	1102	Open in IMG/M
3300010048\|Ga0126373_12120238	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010358\|Ga0126370_10349946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300010358\|Ga0126370_11642169	Not Available	616	Open in IMG/M
3300010360\|Ga0126372_10606491	Not Available	1051	Open in IMG/M
3300010360\|Ga0126372_11758394	Not Available	662	Open in IMG/M
3300010361\|Ga0126378_12399032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300010362\|Ga0126377_10339090	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300010366\|Ga0126379_10878475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300010366\|Ga0126379_10911454	Not Available	982	Open in IMG/M
3300010376\|Ga0126381_100518871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300010376\|Ga0126381_101145053	Not Available	1124	Open in IMG/M
3300010398\|Ga0126383_11944330	Not Available	676	Open in IMG/M
3300010863\|Ga0124850_1063110	Not Available	1141	Open in IMG/M
3300010999\|Ga0138505_100070393	Not Available	517	Open in IMG/M
3300012198\|Ga0137364_10225710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1378	Open in IMG/M
3300012971\|Ga0126369_10254473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1730	Open in IMG/M
3300012971\|Ga0126369_11403457	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300012989\|Ga0164305_11238588	Not Available	649	Open in IMG/M
3300015357\|Ga0134072_10251430	Not Available	637	Open in IMG/M
3300015371\|Ga0132258_10516183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2990	Open in IMG/M
3300018431\|Ga0066655_10867697	Not Available	616	Open in IMG/M
3300018433\|Ga0066667_10640402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300018482\|Ga0066669_10798382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300021168\|Ga0210406_10117624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2249	Open in IMG/M
3300021560\|Ga0126371_13235097	Not Available	551	Open in IMG/M
3300022726\|Ga0242654_10326310	Not Available	571	Open in IMG/M
3300025898\|Ga0207692_10025582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2759	Open in IMG/M
3300025905\|Ga0207685_10179389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300025905\|Ga0207685_10772253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300025915\|Ga0207693_10740865	Not Available	760	Open in IMG/M
3300025916\|Ga0207663_10532657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300025928\|Ga0207700_10047387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3185	Open in IMG/M
3300025929\|Ga0207664_10301827	Not Available	1409	Open in IMG/M
3300025929\|Ga0207664_10906837	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300028784\|Ga0307282_10043382	Not Available	1988	Open in IMG/M
3300028784\|Ga0307282_10160980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300028784\|Ga0307282_10254211	Not Available	844	Open in IMG/M
3300028784\|Ga0307282_10450764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300028793\|Ga0307299_10158525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300028819\|Ga0307296_10722995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	544	Open in IMG/M
3300028828\|Ga0307312_10741719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300028828\|Ga0307312_10966222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300028875\|Ga0307289_10268924	Not Available	701	Open in IMG/M
3300028875\|Ga0307289_10299590	Not Available	662	Open in IMG/M
3300030902\|Ga0308202_1100770	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.64%
Host-Associated	Host-Associated	11.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.64%
Plants	Host-Associated → Plants	11.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Loam	Environmental → Terrestrial → Soil → Loam	42.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	29.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.03%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	28.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01564690	2088090014	Soil	MIGRLSLVGMSKRTNPKKPAKSWRVIIMRSRGELLGYVEALDRERAEAVAIKLFALDDDPRRRLLTERL
GPIPI_02039410	2088090014	Soil	MKIAKRKPTAPKLRSWRVVIMRSRGEYLGSVEAPDRERAEAVAIKQFESDQDQRRRLLIRERQ
INPgaii200_06899642	2228664022	Soil	KKPANLRSWRVIIIRGKGEYLGSVEAPDCDRAEAVAIKQFALDDDQRRRLLIRERD
INPhiseqgaiiFebDRAFT_1015395991	3300000364	Soil	KPANLRSWRVIIIRGKGEYLGSVEAPDCDRAEAVAIKQFALDDDQRRRLLIRERD*
INPhiseqgaiiFebDRAFT_1019473642	3300000364	Soil	VSWRTHPKKPAXVRSWRVHHRRSRGEYLGSVEAPDRERAVGVAIKQFDLDQDQQAVLLIRERP*
AF_2010_repII_A01DRAFT_10042512	3300000580	Forest Soil	VSRRTNPKQPLRSWRVIIMRSKGEHIGTVEAPDCERAEAVAIKQFDLDRDQRSRLLIRERQ*
AF_2010_repII_A100DRAFT_10899951	3300000655	Forest Soil	SCRTCPMKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
JGI1027J12803_1010522962	3300000955	Soil	VSWRTHPKKPANVRSWRVHHRRSRGEYLGSVEAPDRERAVGVAIKQFDLDQDQQAVLLIRERP*
JGI1027J12803_1065904592	3300000955	Soil	ACHTSAMKTARKKPTAPNLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFDLNQDQRGRLLVRTPIIALQ*
JGI12627J18819_103231111	3300001867	Forest Soil	VAYVCWRVAYPKRKKPIPAKLRSWRVIIVRSKGEYLGSVEAPDRERAKAVAVKLFDLDQDQRSRLLIRERM*
Ga0062595_1003669491	3300004479	Soil	MIGRLSLVGMSKRTNPKKPAKSWRVIIMRSRGELLGYVEALDRERAEAVAIKLFALDDDPRRRLLTERL*
Ga0062595_1010092682	3300004479	Soil	MKIAKRKPTAPKLRSWRVVIMRSRGEYLGSVEAPDRERAEAVAIKQFESDQDQRRRLLIRERQ*
Ga0062595_1018293181	3300004479	Soil	YLARVSRRTNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV*
Ga0066684_101213151	3300005179	Soil	DVIALHRARARLNTPYNLRSWRVVIIRSKGEYLGSVEAPDRERAGAAAIKQFDLDQDQRRRQLIRERS*
Ga0066388_1003349542	3300005332	Tropical Forest Soil	VPPRKITKQRPTAAKLRSWRVTIIRKHGQYLGTVEAPDCERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0066388_1003862831	3300005332	Tropical Forest Soil	VSKRTNPKKPPRSWRVIIIRSKGEHLGSVEAPDRERAAAVAIKQFALDDDQRSRLLIRERL*
Ga0066388_1005404214	3300005332	Tropical Forest Soil	MISARKKSTTAKLRSWRVIIMRSKGEHLGTVEAPDRERAEAGAVKAFGLDADQRGRLLIRERQ*
Ga0066388_1013024651	3300005332	Tropical Forest Soil	MKTARKKPTAASLRSWRVIIIRAKGEYLGSVEAPDRERAEVVAIKQFALDDDQRSRLLIRERQ*
Ga0066388_1016906542	3300005332	Tropical Forest Soil	MKGARKKPASANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRKRP*
Ga0066388_1026455231	3300005332	Tropical Forest Soil	VRAEIILCSPKGRSPWRVIIIRSKGEYLGSVEAPDRERAAAVAIKQFDLDPDQRGRMLIRERL*
Ga0066388_1034483052	3300005332	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSRGEHIGTVEAPDRERAEAAAIKQFALDDDQRSRLLIRERQP*
Ga0066388_1041054312	3300005332	Tropical Forest Soil	MKGARKKPTAANMRSWRVIIIRSKGEYLGSVEVPAGDRAEAIAIKQFDDQRSRLLNPGAALTGLRYRSG*
Ga0066388_1053385851	3300005332	Tropical Forest Soil	FVPGPRPRRPAAANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066388_1066963611	3300005332	Tropical Forest Soil	MSRRTDPKKPANLRSWRVIIMRSKGEHIGTVEAPDREMAEAVAIKQFDLDQDQRRRLLSGSGFNRALT*
Ga0066388_1069287731	3300005332	Tropical Forest Soil	MKGVRKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDREKAEAVAIKQFDLDQDQ
Ga0066388_1069973841	3300005332	Tropical Forest Soil	VHRAMPPRKITRQRPTAAKLRSWRVIIIRSKGEYFGSVEAPDRERAQAVAIKQFALDNDQRSRLLIRERL*
Ga0066388_1070480901	3300005332	Tropical Forest Soil	MLRPAPKKKKTTPTKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAVKQFELGQDQRRRLLIRERL*
Ga0070660_1011850231	3300005339	Corn Rhizosphere	LSGHYFGGVSSRTNLKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0070714_1000233294	3300005435	Agricultural Soil	VSRRTNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV*
Ga0070714_1008890252	3300005435	Agricultural Soil	MFGAMSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR*
Ga0070714_1010962762	3300005435	Agricultural Soil	GVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0070713_1001625211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLI
Ga0070713_1007749392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKKKPAAANLRRWRVIIIRSEGEYLGSVEAPDRERAEAVTTKLFDLDQDQRSRLLIRERL*
Ga0070710_100556842	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLTTVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0066681_109656421	3300005451	Soil	MKTARKMPTVTNLRSWAVTIIRSKGEYLDSVEAPRERAEAVAVKQFDLDQDQRSRLLIRERL*
Ga0066670_101379454	3300005560	Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEAPRERAEAVAIKQFDLDQEQRSRLLIRKRA*
Ga0066905_1002172293	3300005713	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDREKAEAVAIKQFALDDDQRSRLLIRERP*
Ga0066903_1000656618	3300005764	Tropical Forest Soil	VSQRTRLKKPAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
Ga0066903_1008664983	3300005764	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAVKQFELDRDQRRRLLIRERL*
Ga0066903_1010926713	3300005764	Tropical Forest Soil	VPKRTHPKKPPRSWRVIIIRSKGEYLGSVEALDRERAEAIAIKQFALDNDQRSRLLIRERP*
Ga0066903_1012550812	3300005764	Tropical Forest Soil	MKTPKNITRQKPAAAKLRSRRVIIIRSKGEHLGTVEAPDRERAEAVAIKEFALDGDQRSRLLIRERH*
Ga0066903_1013396572	3300005764	Tropical Forest Soil	VRPCSVLRISIMSRRTHPKEPANLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0066903_1018551222	3300005764	Tropical Forest Soil	MLQRTGWIHRAVSPKKITRQRPAAANLRSWRVIIIRSKREYPGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERT*
Ga0066903_1021408401	3300005764	Tropical Forest Soil	VPPRKITRQRPTAANLRSWRVIIIRSKGEYLGSVEAPNRERAEAVAVKEFGLDAEQRGRLLIREQS*
Ga0066903_1026365812	3300005764	Tropical Forest Soil	MKGARKKPAAANLRSWRVIIMRSRGEHIGTVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1032075633	3300005764	Tropical Forest Soil	VSKRAKPRNPAQQRSWRVVLIRAKREHLGVVQAPDRERAEAVAIKEFGLDKRGRLLIREQS*
Ga0066903_1034504852	3300005764	Tropical Forest Soil	VSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFELDQNQRRRLLIRERL*
Ga0066903_1038368943	3300005764	Tropical Forest Soil	MKDAGEKPAAANLRSWRAIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1039611401	3300005764	Tropical Forest Soil	MKGARNKPAAAKLRSWRVIIIGSRGEYLASVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1040881092	3300005764	Tropical Forest Soil	VSKRTDPKKPPRSWRVIIIRSKGEHLGSVEAPDRERAEAVAIRQFALDDDQRSRLLIRERQ*
Ga0066903_1041903582	3300005764	Tropical Forest Soil	PAAANLRSWRVIIIRSKGEHLGTVEAPDRERAEAVAVKRFALDDDQRSRLLIRERQ*
Ga0066903_1043004251	3300005764	Tropical Forest Soil	VSKRNPQKPANLRSWRVIIIRSRGEYLGSVEAPDRDRAEAVAVKQFALDADQRRRLLIRERL*
Ga0066903_1047550613	3300005764	Tropical Forest Soil	MYAAVLRPAPKKKKTTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDGDQRRRLLIRERS*
Ga0066903_1051478153	3300005764	Tropical Forest Soil	LSTEEGLKPAANLRSWRVIVIRNKGEYLGSVEAPDRERVEAVAIKQFALDDDQRSRLLIRERP*
Ga0066903_1067778312	3300005764	Tropical Forest Soil	CGHYLASVSRRIPLKKLTKLRSWRVIIMRSKGEHIGTVEAPDRERAEVVAIKQFDLDQERRRRLLIRERV*
Ga0066903_1068818392	3300005764	Tropical Forest Soil	MQHGRDMKAPNKSKRVAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAAAIKQFDLDQDQRRRLLIRERH*
Ga0066903_1071425422	3300005764	Tropical Forest Soil	MSRRTDPKKPANLRSWRVIIMRSKGEHIGTVEAPDREMAEAVAIKQFDLDQDQQRRLLSGSGFNRALT*
Ga0066903_1074130481	3300005764	Tropical Forest Soil	MKGVRKKPTATHLRSWRVIIMRSKGEYLGSVEAPDREKAEAVAIKQFDLDQDQRGRLLILERL*
Ga0066903_1082051351	3300005764	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
Ga0066903_1083875291	3300005764	Tropical Forest Soil	LSTNDGRTKENPNLRSWRVIIIRSKGEYAPSRERPEAVAIKQFALEDDQCSRLLIRERQ*
Ga0066652_1003724581	3300006046	Soil	LQGPVPAHYLAAVSPRKITRQRPAAAKLRSWAVTIIRSKGEYLGSVEAPDREQAETVAIKQFDLDQDQRSRLLIRERL*
Ga0070715_100281372	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR*
Ga0070716_1000509272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFGAMSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ*
Ga0070712_1006260593	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAGKKPAAANPRSWRVIIIRSKGEYLGSVEAPDRERAAAVAIKQFQLDTDQRSRLLIRERV*
Ga0079222_106584762	3300006755	Agricultural Soil	MKAPNKTTKSKRVAAKLRSWRVIIMRHRGEHLGTVEAPERERAELVAVKLFDLDDDRRRRLLIRERS*
Ga0079222_124342342	3300006755	Agricultural Soil	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0066658_105050993	3300006794	Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEHPRERAEAVAIKQFDLDQEQRSRLLIRKRA*
Ga0066665_109318851	3300006796	Soil	MYDGVLRSPRNKPTAAKLRSWAVTIILGKGEYLGSVEAPDRERAEAVAIKQFELDQDQRRRLLIRERP*
Ga0079220_102235392	3300006806	Agricultural Soil	MSKRIRPQKPPNLRSWRVIIIRSKGEYLGSVEAPDRERAELVAVKLFDLDRGQRSRLLIRERQ*
Ga0075421_1007205362	3300006845	Populus Rhizosphere	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSIEAPDRERAEAVAIKQFALDQDQRRRVLIRERQ*
Ga0075431_1006470052	3300006847	Populus Rhizosphere	KLRSWRVIIMRSRGEYLGSLEAPDREKAEAVAIKLFALDGDQRRRLPIV*
Ga0075425_1012535061	3300006854	Populus Rhizosphere	PTAAKLRSWRVIIMRSKGENLGIVEALDRERAEAVAIKLFDLDQDQRSRLLIRERL*
Ga0075425_1012750372	3300006854	Populus Rhizosphere	MLTTVSRRTNPKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0075434_1006147933	3300006871	Populus Rhizosphere	VSQRTRLKKSAKLRSWRVVIMRSRGEYLGSVEAPDREKAEAVAIKLFALDGDQRRRLPIV
Ga0075434_1013241611	3300006871	Populus Rhizosphere	AAKLRSWRVIIMRHRGEHLGTVEAPNCKRAEAVAVKLFDLDHDQRRRLLIRERL*
Ga0075434_1018690772	3300006871	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL*
Ga0075424_1005069653	3300006904	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGENLGIVEALDRERAEAVAIKLFDLDQDQRSRLLIRERL*
Ga0075424_1010226662	3300006904	Populus Rhizosphere	MKTAKRKPTAPKLRSWRVIIMRSRGEYLGSVEAPDREKAEAVAIKLFALDGDQRRRLPIV
Ga0075424_1021640202	3300006904	Populus Rhizosphere	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQEQRSRLLIRERQ*
Ga0079219_120976432	3300006954	Agricultural Soil	GTKPANLRSWRVIIMRSRESERAEAVAIKQFGLDQDQRLRLLIRERQ*
Ga0075418_120266671	3300009100	Populus Rhizosphere	MKTAKRKPTAPKLRSWRVIIMRSRGEYLGSVEAPDREKAEAVAIKLFDLDQDQRGRLLILERQ*
Ga0111538_118516752	3300009156	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ*
Ga0075423_116295942	3300009162	Populus Rhizosphere	LLERWSLVTKRVQKRTAAKLRSWRVIIMRRKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0126374_105873122	3300009792	Tropical Forest Soil	VSKRTNSPKPANLRSWHVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126384_106710181	3300010046	Tropical Forest Soil	MSRRTHPKEPANLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126384_114905712	3300010046	Tropical Forest Soil	ANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126373_106600633	3300010048	Tropical Forest Soil	VSKRTNPQKLLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKPFALDDDQRSRLLIRERP*
Ga0126373_121202382	3300010048	Tropical Forest Soil	VSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDRERAKTVAVKQLELDQDQRRRLLIRERQ*
Ga0126370_103499461	3300010358	Tropical Forest Soil	TRHICYSLLCGDYLARVSRRIPLKKPTKRRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIRQFELDQDQRRRLLIRERQ*
Ga0126370_116421691	3300010358	Tropical Forest Soil	VSKRTNPKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRSRLLIRERV*
Ga0126372_106064912	3300010360	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126372_117583941	3300010360	Tropical Forest Soil	MKGARKKPTAANMRSWRVIIIRSKGEYLGSVEVPAGDRAEAIAIKQFDNQRSRLLNPGAALTGLRYRSG*
Ga0126378_123990321	3300010361	Tropical Forest Soil	LSTLLKRTHPQKPPRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0126377_103390902	3300010362	Tropical Forest Soil	VSKRTNSSKPANLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126379_108784752	3300010366	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0126379_109114541	3300010366	Tropical Forest Soil	CGHYLAGVSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDSERAEAVAIKQFELDQNQRRRLLIRERL*
Ga0126381_1005188712	3300010376	Tropical Forest Soil	VRKRTSPKPATLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126381_1011450531	3300010376	Tropical Forest Soil	KLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126383_119443301	3300010398	Tropical Forest Soil	VSKRTNSSKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0124850_10631102	3300010863	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0138505_1000703932	3300010999	Soil	VCRRTNPKKPANLRSWRVIIIRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERH*
Ga0137364_102257102	3300012198	Vadose Zone Soil	LRSWRVIVIRIKGEYLGSVEAPNHERAEAVPIKQFALDDDQPSRLLIRERLSPAPQVDLK
Ga0126369_102544731	3300012971	Tropical Forest Soil	VSKRTHPRKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0126369_114034571	3300012971	Tropical Forest Soil	RLVIATMLQRTGWIHRAVSPKKITRQRPAAANLRSWRVIIIRSKREYPGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0164305_112385881	3300012989	Soil	MKTTRKKSTAAKLRSWRVIIMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL*
Ga0134072_102514301	3300015357	Grasslands Soil	VSKRTHPKKAADFRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFELDQDQRRRLLIRERP*
Ga0132258_105161834	3300015371	Arabidopsis Rhizosphere	MRAIGFFDSVSKRTHPKKPAKSWRVVIMRSKGEYLGSVEAPDRERAEAVAIKLFDLDQDQRSRLLIREQV*
Ga0066655_108676971	3300018431	Grasslands Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEAPDREWAEAVAIKQFALDDDQRSRLLIRERL
Ga0066667_106404021	3300018433	Grasslands Soil	LDSPRSADYPAPVSRRTNPQKPLRSWRVTIIRSKGEYLGSVEAPDRERAEAVAIKYFDLDQDQRGRLLILERS
Ga0066669_107983821	3300018482	Grasslands Soil	SVLRSPRKKAAAAKLRSWRIIIIRSKGEYLGSVEAPDRERAEAAAIKYFDLDQDQRGRLLILERS
Ga0210406_101176244	3300021168	Soil	MSRRIHPKKPANLRSRRVIIMRSRGEYLGSVEGPDRERAEAVAIKQYALDDDQRRRLLIRERQ
Ga0126371_132350971	3300021560	Tropical Forest Soil	VSKRTNSPKPANLRSWHVIITRSKGEYLGSVEAPNRERAEAVAIKQFALDDDHRSRLLIRERP
Ga0242654_103263101	3300022726	Soil	MMIARKKPTAAKLRSWRVIIMRNKGEYLGAVEAPDRERAEAVAIKQFALDQDQRRRLLVRERH
Ga0207692_100255823	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207685_101793891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207685_107722531	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAGKKPAAANPRSWRVIIIRSKGEYLGSVEAPDRERAKAVAVKQFDLDQDQRR
Ga0207693_107408651	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AKLRSWRVIIMRSRGEYLGSVEAPDRERAEDVAIKLFELDDDQRRRLLIRLR
Ga0207663_105326572	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207700_100473871	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VQSRCPKKKKPAAANLRRWRVIIIRSEGEYLGSVEAPDRERAEAVTTKLFDLDQDQRSRLLIRERL
Ga0207664_103018272	3300025929	Agricultural Soil	TNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV
Ga0207664_109068372	3300025929	Agricultural Soil	PTMLTTVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL
Ga0307282_100433822	3300028784	Soil	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL
Ga0307282_101609801	3300028784	Soil	MAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIREMH
Ga0307282_102542111	3300028784	Soil	MLRPAVTSPRKTARNKPTAANLRSWRVIILRSRGEYLGSVEAPDRERAEAVAIKQFDLDLEQRRRLLIREVT
Ga0307282_104507642	3300028784	Soil	MSTRLNPKKPAKLRSWRVIIMRSRGEYLGSIEAPDRQTAEAAAIKLFDLDQDQRSRLLIRERV
Ga0307299_101585252	3300028793	Soil	VRRPKKKTATKLRSWRVVTMRSRGELLGYVEALDRERAEAVAIKQFDLDQDQRRRPLIRERQG
Ga0307296_107229951	3300028819	Soil	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDYQRS
Ga0307312_107417191	3300028828	Soil	CRTSPIMAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERD
Ga0307312_109662223	3300028828	Soil	PAKLRSWRVIIMRSRGEYLGSIEAPDRQTAEAAAIKLFDLDQDQRSRLLIRERV
Ga0307289_102689241	3300028875	Soil	MAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERV
Ga0307289_102995901	3300028875	Soil	MRTARRKPTAAKLRSWRVIIMRSRGELLGYVEALDRERAEGEAIKLFDLDQDQRGRLLILERA
Ga0308202_11007701	3300030902	Soil	MKTARKKPTAAKLRSWRVIIMRSRGELLGYVEALDRERAEGEAIKLFDLDQDQRGRLLILERA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061330

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences