Metagenome / Metatranscriptome Family F061306

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061306
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	58 residues
Representative Sequence	MPVHHDRSRVHEARISGLAITLSVAALILVVVYVVGGYANRIVIEVVAISTPAASTH
Number of Associated Samples	113
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.06 %
% of genes near scaffold ends (potentially truncated)	28.03 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.939 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (28.788 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.697 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.65% β-sheet: 0.00% Coil/Unstructured: 42.35%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00384	Molybdopterin	29.55
PF00535	Glycos_transf_2	14.39
PF00486	Trans_reg_C	9.85
PF02769	AIRS_C	6.06
PF13714	PEP_mutase	3.03
PF10604	Polyketide_cyc2	1.52
PF04324	Fer2_BFD	0.76
PF02604	PhdYeFM_antitox	0.76
PF01568	Molydop_binding	0.76
PF00890	FAD_binding_2	0.76
PF00903	Glyoxalase	0.76
PF07837	FTCD_N	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.94 %
Unclassified	root	N/A	6.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.94 %
Unclassified	root	N/A	6.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.94 %
Unclassified	root	N/A	6.06 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.94 %
Unclassified	root	N/A	6.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	29.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13.64 %
Unclassified	root	N/A	6.06 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	21.97 %
Unclassified	root	N/A	6.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.52 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.67 %
Unclassified	root	N/A	6.06 %
Chloroflexi bacterium RBG_19FT_COMBO_55_16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	5.30 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.76 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.67 %
Unclassified	root	N/A	6.06 %
Chloroflexi bacterium RBG_19FT_COMBO_55_16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	5.30 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.76 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	16.67 %
Unclassified	root	N/A	6.06 %
Chloroflexi bacterium RBG_19FT_COMBO_55_16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	5.30 %
Pelolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Pelolinea	0.76 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig14546	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig232346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	949	Open in IMG/M
3300000956\|JGI10216J12902_116645525	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300002568\|C688J35102_119593436	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300003321\|soilH1_10132354	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300004081\|Ga0063454_100067669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1530	Open in IMG/M
3300004114\|Ga0062593_100971554	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300004156\|Ga0062589_100624673	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300004156\|Ga0062589_101047510	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300004463\|Ga0063356_105397802	Not Available	549	Open in IMG/M
3300004479\|Ga0062595_100691091	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300004479\|Ga0062595_101623655	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005093\|Ga0062594_100446285	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005093\|Ga0062594_100495529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1031	Open in IMG/M
3300005174\|Ga0066680_10716228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	612	Open in IMG/M
3300005329\|Ga0070683_102249775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	523	Open in IMG/M
3300005338\|Ga0068868_101371507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	659	Open in IMG/M
3300005406\|Ga0070703_10245321	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005440\|Ga0070705_100556130	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005444\|Ga0070694_100138065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1768	Open in IMG/M
3300005444\|Ga0070694_100272452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1288	Open in IMG/M
3300005445\|Ga0070708_100684567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	966	Open in IMG/M
3300005445\|Ga0070708_101594602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300005447\|Ga0066689_10541051	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005459\|Ga0068867_100755697	Not Available	863	Open in IMG/M
3300005467\|Ga0070706_100125579	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300005468\|Ga0070707_102306827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300005471\|Ga0070698_101358730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300005471\|Ga0070698_101747070	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005554\|Ga0066661_10331584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	934	Open in IMG/M
3300005556\|Ga0066707_10057392	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005577\|Ga0068857_100595326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Pelolinea	1045	Open in IMG/M
3300005587\|Ga0066654_10569365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300005598\|Ga0066706_10940779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300005614\|Ga0068856_101873464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	611	Open in IMG/M
3300005764\|Ga0066903_104267314	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005843\|Ga0068860_100730872	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300006031\|Ga0066651_10352894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300006046\|Ga0066652_100383753	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300006163\|Ga0070715_10628969	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006173\|Ga0070716_100064764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2126	Open in IMG/M
3300006806\|Ga0079220_10564818	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006852\|Ga0075433_11166746	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006854\|Ga0075425_102985422	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006903\|Ga0075426_10722847	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006904\|Ga0075424_101109305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300006954\|Ga0079219_10040548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1927	Open in IMG/M
3300009012\|Ga0066710_100184357	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300009098\|Ga0105245_10096670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2726	Open in IMG/M
3300009098\|Ga0105245_11509304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	723	Open in IMG/M
3300009143\|Ga0099792_10333584	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009162\|Ga0075423_10898406	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300009177\|Ga0105248_12274808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300010039\|Ga0126309_10595477	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010044\|Ga0126310_10252141	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010373\|Ga0134128_11960285	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300011444\|Ga0137463_1255697	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300011444\|Ga0137463_1321673	Not Available	562	Open in IMG/M
3300011996\|Ga0120156_1027616	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300012004\|Ga0120134_1012237	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012200\|Ga0137382_11330099	Not Available	506	Open in IMG/M
3300012207\|Ga0137381_10270030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300012212\|Ga0150985_103753228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300012361\|Ga0137360_11247466	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012361\|Ga0137360_11319773	Not Available	623	Open in IMG/M
3300012362\|Ga0137361_11259134	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012922\|Ga0137394_10239050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1552	Open in IMG/M
3300012929\|Ga0137404_12008446	Not Available	539	Open in IMG/M
3300012930\|Ga0137407_11257472	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012930\|Ga0137407_11664446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300012955\|Ga0164298_10666844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300012957\|Ga0164303_10470305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300012957\|Ga0164303_10788822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300012958\|Ga0164299_10690581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300012986\|Ga0164304_11001831	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012986\|Ga0164304_11472244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300012986\|Ga0164304_11530622	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012987\|Ga0164307_10940594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300012987\|Ga0164307_11747500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300012989\|Ga0164305_11694774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300013306\|Ga0163162_11152883	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300013503\|Ga0120127_10010950	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300013758\|Ga0120147_1029275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1025	Open in IMG/M
3300013772\|Ga0120158_10022915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5041	Open in IMG/M
3300014497\|Ga0182008_10050880	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300014829\|Ga0120104_1015653	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300014969\|Ga0157376_10306238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300015203\|Ga0167650_1094814	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300015371\|Ga0132258_10127008	All Organisms → cellular organisms → Bacteria	6072	Open in IMG/M
3300015371\|Ga0132258_11543224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1677	Open in IMG/M
3300015372\|Ga0132256_100621745	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300015374\|Ga0132255_103941521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300018000\|Ga0184604_10180040	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018027\|Ga0184605_10505943	Not Available	525	Open in IMG/M
3300018059\|Ga0184615_10153706	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300018071\|Ga0184618_10081939	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300019883\|Ga0193725_1026771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1554	Open in IMG/M
3300019888\|Ga0193751_1040841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2075	Open in IMG/M
3300020082\|Ga0206353_10441038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300021080\|Ga0210382_10024753	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300021080\|Ga0210382_10403351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	605	Open in IMG/M
3300021080\|Ga0210382_10452626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300021344\|Ga0193719_10091504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1323	Open in IMG/M
3300021344\|Ga0193719_10275932	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300021415\|Ga0193694_1035827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	696	Open in IMG/M
3300024325\|Ga0247678_1075562	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025910\|Ga0207684_10009343	All Organisms → cellular organisms → Bacteria	8663	Open in IMG/M
3300025910\|Ga0207684_11532314	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300025916\|Ga0207663_10824935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300025917\|Ga0207660_10230589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1456	Open in IMG/M
3300025918\|Ga0207662_10627688	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300025922\|Ga0207646_10001518	All Organisms → cellular organisms → Bacteria	28512	Open in IMG/M
3300025949\|Ga0207667_11242247	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025961\|Ga0207712_11502174	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300026089\|Ga0207648_10836170	Not Available	858	Open in IMG/M
3300026285\|Ga0209438_1057321	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300026929\|Ga0207461_1001568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	885	Open in IMG/M
3300027526\|Ga0209968_1000342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	7789	Open in IMG/M
3300027903\|Ga0209488_10008100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7837	Open in IMG/M
3300028380\|Ga0268265_10026609	All Organisms → cellular organisms → Bacteria	4118	Open in IMG/M
3300028381\|Ga0268264_11483822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	689	Open in IMG/M
3300028721\|Ga0307315_10131053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300028768\|Ga0307280_10341744	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028778\|Ga0307288_10152683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	870	Open in IMG/M
3300028799\|Ga0307284_10037624	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300028807\|Ga0307305_10036550	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300028824\|Ga0307310_10109354	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300028828\|Ga0307312_10151564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1471	Open in IMG/M
3300028880\|Ga0307300_10026537	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300031152\|Ga0307501_10176285	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300032002\|Ga0307416_101479730	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300032174\|Ga0307470_11197984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_19FT_COMBO_55_16	617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.03%
Host-Associated	Host-Associated	21.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.45%
Plants	Host-Associated → Plants	21.97%
Aquatic	Environmental → Aquatic	6.82%
Unclassified	Environmental → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.85%
Sediment	Environmental → Aquatic → Sediment	4.55%
Freshwater	Environmental → Aquatic → Freshwater	2.27%
Unclassified	Environmental → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.79%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.27%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.06%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.03%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026929	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00832480	2124908016		MPVQRDRARVQEARIAGLAIMLSAAALILVVVYLVGGYASRVVVVLVDSVPAASVR
Perma_A_C_01222160	2124908032	Soil	MPVHRDRSRVHEARISGLAIMLSVVALALVLVYVVGGYANRIVVEVVAIPGPTVSAAP
JGI10216J12902_1166455252	3300000956	Soil	VSVHRDRSRVTEARVAGLAIVLSVAALALVVVYLVAGYVDHVAIQIVNAAPSIPTSTP*
C688J35102_1195934362	3300002568	Soil	MTAQRDRSRVQEARVAGLAITLSVAALILVVVYVVGGFASRVVIEVVSAVPTASAR*
soilH1_101323543	3300003321	Sugarcane Root And Bulk Soil	MHSPRDRSRIHEARVAGLAITLSAAALVLVLVYVVGGFANRVVVQVVFDTPSPSTSIQ*
Ga0063454_1000676691	3300004081	Soil	VPVHRDRSRSHEARVAGLAITLSTLALILVVVYVVGGYARHVVVEIVESTTPVSSAR*
Ga0062593_1009715542	3300004114	Soil	VHRDRSRVHEARISGLAITFSVATLILVVVYVVGGYANRIVIEVVSISAPAASTH*
Ga0062589_1006246731	3300004156	Soil	MPVHHDRSRVHEARISGLAITLSVAALILVVVYVVGGYANRIVIEVVAISTPAASTH*
Ga0062589_1010475102	3300004156	Soil	MPVHRDRSRVHEARISGLAITFSVATLILVVVYVVGGYANRIVIEVVSISAPAASTH*
Ga0063356_1053978021	3300004463	Arabidopsis Thaliana Rhizosphere	GCYPPPVPVHHDRSRVHEARISGLAIMLSVAALILVLAYLVGGYANHVVIEVVSYPGSSASP*
Ga0062595_1006910912	3300004479	Soil	MSVHRDRSRVHEARIAGLAITLSAAALILVLVYVVGGYATRVVIEVVDAASPAALTVAESAAP*
Ga0062595_1016236552	3300004479	Soil	VPVHRDRSRVHEARISGLAITLSVAALALVVVYVVGGFANRVVIEVVAIPGSAASASP*
Ga0062594_1004462852	3300005093	Soil	MPVHHDRSRVHEARISGLAIMLSVTALILVVVYLVGGYTNRIVIEIVAISTPAASTH*
Ga0062594_1004955291	3300005093	Soil	MPAHRDRSRVAEARISGLAITLSVAALILALVYVVGGYANHVVVVIVDSVPTASVR*
Ga0066680_107162282	3300005174	Soil	MPTHRQRSSAHEARIAGLAITLSAAALILVLVYVVGGYARRIVVEIVPAAPAASAR*
Ga0070683_1022497751	3300005329	Corn Rhizosphere	MPVHRDRSRVHEARISGLAITLSLAALILVLVYVVGGYATTIVVEVVAIPGASVSAAP*
Ga0068868_1013715072	3300005338	Miscanthus Rhizosphere	MSVHRDRSRVHEARIAGLAITLSAAALILVLVYVVGGYATRVVTEVVDAASPAALTVAESAAP*
Ga0070703_102453211	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHHDRSRVHEARISGLAIMLSVTALILVVVYLVGGYANRIVIEIVAISTPAASTH*
Ga0070705_1005561301	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPAHRQRSSAQEARLAGLAITLSALALILVVVYVVGGYAHRIVVEIVPAAPQASIR*
Ga0070694_1001380651	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RESGGTDRLPRMPAHRDRSRVAEARISGLAITLSVAALILALVYVVGGYANHVVVVIVDSVPTASVR*
Ga0070694_1002724521	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPAHRQRSSAQEARLAGLAITLSALALILVVVYVVGGYAHRIVVEIVPAA
Ga0070708_1006845673	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHRDRSRVHEARVAGLAITLSVAALILVLVYVIGGYASHVIVVIVDSTPAASVR*
Ga0070708_1015946021	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHNDRSRVHEARISGLAITLSLVALILVVVYSVGGYATRIVVEVVTIPVP
Ga0066689_105410512	3300005447	Soil	MPAHRQRSSAHEARVAGLAITLSAAALILVLVYVVGGYARRIVVEIVPAAPAASAR*
Ga0068867_1007556971	3300005459	Miscanthus Rhizosphere	RVHEARISGLAITLSVAALILVIAYVVGGFANRVIVEVVAIPAAGASSAPFH*
Ga0070706_1001255792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPAHRQRSSAHEARIAGLAITLSAAALILVLVYVVGGYARRIVVEIVPAAPAASAR*
Ga0070707_1023068271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHKDRSRVHESRVAGLAITLSCAALILVIVYVVGGYANRIVVEVVDLRSPAATAR*
Ga0070698_1013587301	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGLANRVVIQVVAIPGSSISASP*
Ga0070698_1017470701	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	HEARIAGLAITLSAAALILVLVYVVGGYARRVIVEIVPVAPAASVR*
Ga0066661_103315841	3300005554	Soil	MPAHRQRSSAHEARVAGLAITLSAAALILVLVYVVGGYARRVIVEIVPVAPAASVR*
Ga0066707_100573923	3300005556	Soil	MVAAHRDRSRVHEARVSGLAITLSVAALALVVLYVVGGFANRVVIQVAAIPGSAVSASP*
Ga0068857_1005953262	3300005577	Corn Rhizosphere	MPVHRDRSRVHEARISGLAITLSLAALILVLVYLVGGYATRIVVEVVAIPGASVSAAP*
Ga0066654_105693652	3300005587	Soil	VRAPRDRSRPQEARVAGVAITLSVAALVLVLMYVIGGYAHHVVIEVVSVAAPVASPR*
Ga0066706_109407792	3300005598	Soil	MPVHRDRSRIHEARISGLAIMLSAASLILVVVYVVGGFANRIAVEVVSIPGAGVSAPPTR
Ga0068856_1018734642	3300005614	Corn Rhizosphere	SRLMSVHRDRSRVHEARIAGLAITLSAAALILVLVYVVGGYATRVVIEVVDAASPAALTVAESAAP*
Ga0066903_1042673142	3300005764	Tropical Forest Soil	MSTQRDRSRITEARVAGLAITLSVVALALVLVYIVGGYVDHVAVQIVNAAATIPAQTP*
Ga0068860_1007308721	3300005843	Switchgrass Rhizosphere	EARISGLAISLSLAALVLAVVYSVGGYANRVVIEVVAIPGVSVSASPPS*
Ga0066651_103528942	3300006031	Soil	MPVHRDRSRVQEARISGLAITLSAAALILVVVYVVGGFANRIVIEVVAVPRFSSPNASTR
Ga0066652_1003837532	3300006046	Soil	MVAAHRDRSRVHEARISGLAITLSVAALALVALYVVGGFANRVVIQVVAIPGSAVSASP*
Ga0070715_106289692	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSVHRDRSRVHEARVAGLAITLSAAALILVLVYVVGGYATRVVIEVVDAASPAALTVAESAAP*
Ga0070716_1000647643	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPAHRQRSSAHEARIAGLAITLSAAALILVLVYVVGGYARRVIVEIVPVAPAASVR*
Ga0079220_105648182	3300006806	Agricultural Soil	MPVHRDRSRVHEARLAGLAITLSTLALILVVVYVVGGYARHVVIEIVDSAGPVSSSR*
Ga0075433_111667462	3300006852	Populus Rhizosphere	SSGECPIRSARESGGTDRLPRMPAHRDRSRVAEARISGLAITLSVAALILALVYVVGGYANHVVVVIVDSVPTASVR*
Ga0075425_1029854222	3300006854	Populus Rhizosphere	RVQEARIAGLAILLATAALILVVVYVVGGLANRTVIQIVDAATPAAQLP*
Ga0075426_107228472	3300006903	Populus Rhizosphere	MPVHRDRSRIHEARVAGLAITLSLASLVLVLVYVIAGFANHVIVVVVDAPSAAASVH*
Ga0075424_1011093052	3300006904	Populus Rhizosphere	VSDHRDRSRVQEARIAGLAILLATAALILVVVYVVGGLANRTVIQIVDVATPAAQLP*
Ga0079219_100405483	3300006954	Agricultural Soil	MPVHRDRSRVHEARLAGLAITLSTLALILVVVYVVGGYARHVVIEIVDSAAPV
Ga0066710_1001843573	3300009012	Grasslands Soil	MVAAHRDRSRVHEARVSGLAITLSVAALALVVLYVVGGFANRVVIQVAAIPGSAVSASP
Ga0105245_100966703	3300009098	Miscanthus Rhizosphere	MSVHRDRSRVHEARVAGLAITLSAAALILILVYVVGGYATRVVIEVVDAASPAALTVAESAAP*
Ga0105245_115093042	3300009098	Miscanthus Rhizosphere	SPPMPVHHDRSRVHEARISGLAIMLSVTALILVVVYLVGGYANRIVIEIVAISTPAASTH
Ga0099792_103335842	3300009143	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSSIPASP*
Ga0075423_108984062	3300009162	Populus Rhizosphere	MPVHRDRSRVAEARIAGLAITLSVAALILVLVYVVGGFANHVVLVIVDSTPAASVS*
Ga0105248_122748082	3300009177	Switchgrass Rhizosphere	VSDHRDRSRVQEARIAGLAILLATAALILVVVYVVGGLANRTVIQIVDAATPAAQLP*
Ga0126309_105954771	3300010039	Serpentine Soil	VPVHHDRSRVHEARAAGLAITLSVAALILVVAYLVGGYANRVVVEIVTALPTASVTAP*
Ga0126310_102521413	3300010044	Serpentine Soil	MPVHRDRSRTHEARLAGLAITLSAFALILVVVYVVGGYARHVVVELVDSAAPVSSSR*
Ga0134128_119602852	3300010373	Terrestrial Soil	VSDHRDRSRVQEARIAGLAILLATAALILVVVYVVGGLANRTVIQIDDVATPAAQLP*
Ga0137463_12556972	3300011444	Soil	VPVHHDRSRVHEARISGLAITLSLAALILVVVYLVGGYANQIVVEVVAIPLPSASAPR*
Ga0137463_13216731	3300011444	Soil	MPVHHDRSRAYEARMSGLAITLSAAALILVVVYVVGGYANRIVIEVVAVPGFASPTAST
Ga0120156_10276162	3300011996	Permafrost	VPAHRQRSGVHEARVAGLAITLSVAALILVLVYVIGDYAHRVVVEIVPVVPTASTR*
Ga0120134_10122372	3300012004	Permafrost	VPAHRQRSGVHEGRVAGLAITLSVAALILVLVYVIGDYAHRVVVEIVPVVPTASTR*
Ga0137382_113300992	3300012200	Vadose Zone Soil	VSVHRDRSRVQEARVAGLAIMLAAAAMILVIVYVVGGLANRTVIQIVDAATPAANLP*
Ga0137381_102700303	3300012207	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAVP
Ga0150985_1037532282	3300012212	Avena Fatua Rhizosphere	VPVHRDRSRSHEARVAGLAITLSTLALILVVVYVVGGYARHVVVEIVGSTTPVSSAR*
Ga0137360_112474662	3300012361	Vadose Zone Soil	MPVHRDRSRVQEARISGLAITLSAAALILVVVYVVGGFANRIVIEVVAVPGFSSPNASTR
Ga0137360_113197731	3300012361	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIRVVAIPGLAVSASP*
Ga0137361_112591342	3300012362	Vadose Zone Soil	MVPVHRDRSRVHEARISGLAITLSVAALALVVLYVVGGFANRVVIRVVAIPGLAVSASP*
Ga0137394_102390502	3300012922	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSTVSASP*
Ga0137404_120084462	3300012929	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVLVYLVGGFANRVVIQVVAIPGSTVSASP*
Ga0137407_112574721	3300012930	Vadose Zone Soil	MPVHHDRSRVHEARISGLAITLSLAALILVVIYLVGGYANRIVVEVVTIPFPSASGPP*
Ga0137407_116644461	3300012930	Vadose Zone Soil	MPVHRDRSRVHEARISGLAITLSAAALILVVVYVVGGFANRILIQVVAVPGFSSP
Ga0164298_106668442	3300012955	Soil	MSVHRDRSRVHEARVAGLAITLSAAALILVIVYVVGGYATRVVIEVVDAASPAAVTVAES
Ga0164303_104703052	3300012957	Soil	MPVHHDRSRVQEARIAGLAITLSLAALILVVVYVVGGYAHHVVVVIVDSVPTASVR*
Ga0164303_107888222	3300012957	Soil	VQPHRQRASGQAWRIAGLAITVSAAALILVVVYLVGGYANRIVVEVVAIPLPSVSAAP*
Ga0164299_106905812	3300012958	Soil	MPVHRDRSRVHEARVAGLAITLSAAALILVIVYVVGGYATRVVIEVVD
Ga0164304_110018312	3300012986	Soil	MSVHRDRSRVHEARVAGLAITLSAAALILVVVYVVGGYATRVVIEVVDAASPSALTVAESAAP*
Ga0164304_114722442	3300012986	Soil	VPPHRQRASAHESRIAGLAITVSAAALILVVVYLVGGYANRIVVEVVAIPLPSVSAAP*
Ga0164304_115306222	3300012986	Soil	MPVHHDRSRVQEARIAGLAITLSLAALILVLVYVVGGYAHHVVVVIVDSVPTASVR*
Ga0164307_109405942	3300012987	Soil	MSVHRDRSRVHEARVAGLAITLSAAALILVLVYVVGGYATRVVIEVVDAASPSALTV
Ga0164307_117475002	3300012987	Soil	VSDHRDRSRVQEARIAGLAILLATAALILVVVYTVGGLANRTVIQIVDAATPAAQLP*
Ga0164305_116947741	3300012989	Soil	VPDHRDRSRVQEGRVAGLAILLATAALILVVVYVVGGLANRTVIQIVDVATPAAQLP*
Ga0163162_111528832	3300013306	Switchgrass Rhizosphere	MPVHRDRSRVHEARIAGLAITLSAAALILVLVYVVGGYATRVVTEVVDAALPAALTVAESAAP*
Ga0120127_100109501	3300013503	Permafrost	PAHRQRSGVHEGRVAGLAITLSVAALILVLVYVIGDYAHRVVVEIVPVVPTASTR*
Ga0120147_10292752	3300013758	Permafrost	VPAHRQRSGVHEARVAGLAITLSVAALILVLVYVIGDYAHRVVVEIVSVVPTASTR*
Ga0120158_100229154	3300013772	Permafrost	VPAHRQRSGVHEARVAGLAITLSVAALILVLVYVIGDYAHRVVIEIVPVVPTASTR*
Ga0182008_100508801	3300014497	Rhizosphere	HSSDACLLASGAMPVHRDRSRVQEARISGLAIMLSVAALVLVLGYVVGGYANRVVVQVVFDPSPAASTR*
Ga0120104_10156533	3300014829	Permafrost	VPAHRQRSGVHEGRIAGLAITLSVAALILVLVYVIGDYAHRVVVEIVPVVPTASTR*
Ga0157376_103062382	3300014969	Miscanthus Rhizosphere	VPDHRDRSRVQEGRVAGLAILLATAALILVVVYVVGGLANRTVIQIVDAATPAAQLP*
Ga0167650_10948141	3300015203	Glacier Forefield Soil	VVPVHHDRSRVQEARISGLAIMLSAAALILVVVYVVGGYANRIVVEVVTIPGPVVSAAPS
Ga0132258_101270083	3300015371	Arabidopsis Rhizosphere	MPVHRDRSRVHEARYAGLAIMLSVAALILVVVYLVGGYANRVVIEVVDFSSPAAVTTP*
Ga0132258_115432241	3300015371	Arabidopsis Rhizosphere	VSDHRDRSRVQEARVAGLAILLATAALILVVVYVVGGLANRTVIQIVDVATPAAQLP*
Ga0132256_1006217453	3300015372	Arabidopsis Rhizosphere	MPVHRDRSRVHEARFAGLAIMLSVAALILVVVYLVGGYANRVVIEVVDFSSPAAVTTP*
Ga0132255_1039415212	3300015374	Arabidopsis Rhizosphere	MPVQRDRSRVHEARYAGLAIMLSVAALILVVVYLVGGYANRVVIEVVDFSSPAAVTTP*
Ga0184604_101800402	3300018000	Groundwater Sediment	VPVHRDRSRVHEARIAGLAISLSLAALIFVIAYVVGGYANRVVVRVVTESGQGVTASP
Ga0184605_105059431	3300018027	Groundwater Sediment	VPVHRDRSRVYEARISGLAITLSVAALALVVAYVVGGYANRVVIQVVAIPGSSISASP
Ga0184615_101537062	3300018059	Groundwater Sediment	MPVHHDRSRVHEARISGLAILLSVAALILVLVYVVGGYANRVVIEVVTIPGPSVSAAP
Ga0184618_100819392	3300018071	Groundwater Sediment	MPVHRDRSRVYEARISGLAITLSVAALALVVAYVVGGYANRVVVQVVAIPGSSISASP
Ga0193725_10267713	3300019883	Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSSISASP
Ga0193751_10408411	3300019888	Soil	VPAHRQRSNVQEARIAGLAIMLSVAVLILVVVYLVGGYAQRVIVEIVPVAPAASSS
Ga0206353_104410383	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHRDRSRVHEARLAGLAITLSTLALILVVVYVVGGYARHVVIEIVDNAAPVSSSR
Ga0210382_100247533	3300021080	Groundwater Sediment	MPAHRQRASAQEARIAGLAISLSVAALILCLVYVVGGYAHHVVVEIVPISGPAASTR
Ga0210382_104033511	3300021080	Groundwater Sediment	PTVPVHRDRSRVYEARISGLAITLSVAALALVVAYVVGGYANRVVIQVVAIPGSSISASP
Ga0210382_104526261	3300021080	Groundwater Sediment	MVPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSSISASP
Ga0193719_100915042	3300021344	Soil	VPVHRDRSRVREARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSTAPASP
Ga0193719_102759322	3300021344	Soil	VPVHRDRSRVHEARIAGLAISLSLAALILVIAYVVGGYANRVVVRVVTESGQGVTASP
Ga0193694_10358272	3300021415	Soil	MPVHRDRSRVYEARISGLAITLSVAALALVVAYVVGGYANRVVIQVVAIPGSSISASP
Ga0247678_10755621	3300024325	Soil	AQEARLAGLAITLSALALILVVVYVVGGYAHRIVVEIVPAAPQASIR
Ga0207684_100093433	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHRDRSRVYEARISGLAITLSAAALILALVYVVGGFANKIVVEVVAAPGFASPHASTR
Ga0207684_115323143	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RESGGTDRLPRMPAHRDRSRVAEARISGLAITLSVAALILALVYVVGGYANHVVVVIVDSVPTASVR
Ga0207663_108249352	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSDHRDRSRVQEARIAGLAILLATAALILVVVYVVGGLANRTVIQIVDVAT
Ga0207660_102305893	3300025917	Corn Rhizosphere	MPAHRDRSRVAEARISGLAITLSVAALILALVYVVGGYANHVVVVIVDSVPTASVR
Ga0207662_106276882	3300025918	Switchgrass Rhizosphere	MPAQRQRSSAQEARLAGLAITLSALALILVVVYVVGGYAHRIVVEIVPAAPQASIR
Ga0207646_100015187	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPVHRDRSRVHEARVAGLAITLSVAALILVLVYVIGGYASHVIVVIVDSTPAASVR
Ga0207667_112422471	3300025949	Corn Rhizosphere	MPVHHDRSRVHEARISGLAIMLSVTALILVVVYLVGGYANRIVIEIVAISTPAASTH
Ga0207712_115021742	3300025961	Switchgrass Rhizosphere	MPVHRDRSRVHEARISGLAITLSVAALILVIAYVVGGFANRVIVEVVAIPAAGASSAPFH
Ga0207648_108361702	3300026089	Miscanthus Rhizosphere	VHEARISGLAITLSVAALILVIAYVVGGFANRVIVEVVAIPAAGASSAPFH
Ga0209438_10573213	3300026285	Grasslands Soil	MPVHHDRSRVHEARISGLAITLSLAALILVVIYLVGGYANRIVVEVVTIPFPSASGPP
Ga0207461_10015682	3300026929	Soil	MPVHRDRSRVHEARISGLAITFSVATLILVVVYVVGGYANRIVIEVVSISAPAASTH
Ga0209968_10003421	3300027526	Arabidopsis Thaliana Rhizosphere	RAPSGPGRRCGRGCYPPPVPVHHDRSRVHEARISGLAIMLSVAALILVLAYVVGGYANHVVIEVVGINPGSSASP
Ga0209488_100081003	3300027903	Vadose Zone Soil	VPVHRDRSRVYEARISGLAITLSVAALALVVVYVVGGFANRVVIQVVAIPGSSIPASP
Ga0268265_100266093	3300028380	Switchgrass Rhizosphere	MPVHHDRSRVHEARISGLAIMLSVTALILVVVYLVGGYTNRIVIEIVAISTPAASTH
Ga0268264_114838222	3300028381	Switchgrass Rhizosphere	VHEARISGLAISLSLAALVLAVVYSVGGYANRVVIEVVAIPGVSVSASPPS
Ga0307315_101310531	3300028721	Soil	VPVHHDRSRALEARLAGLAITLSAAALILVVVYVVGGYTNRVVVEIVTALPSASLTVLP
Ga0307280_103417441	3300028768	Soil	VHRDRSRIHEARVAGLAITLGVAALILVVVYVVGGYANRVVVEIVAIPGAAASTAPR
Ga0307288_101526833	3300028778	Soil	VPVHHDRSRALEARLAGLAITLSAAALILVVVYVVGGYANRVVVEIVTALPSASLTVLP
Ga0307284_100376241	3300028799	Soil	VHEARISGLAITLSLAALVLVVVYAVGGYAHRVVIEVVDFPGQSISASPPS
Ga0307305_100365503	3300028807	Soil	MPAHRQRASTHEARIAGLAITLSVAALVLVLAYVVGGYAHRIVVEIVPMAPSASTR
Ga0307310_101093542	3300028824	Soil	MPVHRDRSRVHEARISGVAITLSLAALILVVVYLVGGYANRIVVEVVAIPGASVNAVP
Ga0307312_101515642	3300028828	Soil	MPVHRDRSRIHEARVAGLAITLGVAALILVVVYVVGGYANRVVVEIVAIPGAAASTAPR
Ga0307300_100265371	3300028880	Soil	VPVHRDRSRVHEARIAGLAISLSLAALIFVIAYVVGGYANRVVVRVVTE
Ga0307501_101762851	3300031152	Soil	DRSRVHEARISGLAITLSLAALILVVVYLVGGYANRIVVEVVAIPGASVGVLP
Ga0307416_1014797303	3300032002	Rhizosphere	AIGPGRRCGGGGCYPPPVPVHHDRSRVHEARISGLAIMLSVAALILVLAYVVGGYANHVVIEVVGIYPGSSASP
Ga0307470_111979841	3300032174	Hardwood Forest Soil	PPMPAHRDRSRVHEARVAGLAILLSVAALILVVTYLVGGYANRVVIQVVEMSSPAAVTTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061306

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences