NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F061304

Metagenome Family F061304

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F061304
Family Type Metagenome
Number of Sequences 132
Average Sequence Length 43 residues
Representative Sequence HHYHIVALALEELQRELSTEQRAQLLQKLHEEMNRPNPS
Number of Associated Samples 113
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.97 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.273 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(9.091 % of family members)
Environment Ontology (ENVO) Unclassified
(18.939 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.091 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.27%    β-sheet: 0.00%    Coil/Unstructured: 53.73%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF08338DUF1731 31.06
PF00749tRNA-synt_1c 6.82
PF01712dNK 1.52
PF13462Thioredoxin_4 1.52
PF00909Ammonium_transp 1.52
PF07726AAA_3 0.76
PF00975Thioesterase 0.76
PF01435Peptidase_M48 0.76
PF04014MazE_antitoxin 0.76
PF14765PS-DH 0.76
PF01726LexA_DNA_bind 0.76
PF05598DUF772 0.76
PF13328HD_4 0.76
PF00069Pkinase 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 31.06
COG0008Glutamyl- or glutaminyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 6.82
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.03
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 1.52
COG1428Deoxyadenosine/deoxycytidine kinaseNucleotide transport and metabolism [F] 1.52


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.27 %
UnclassifiedrootN/A22.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10275442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300001593|JGI12635J15846_10142078All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300004479|Ga0062595_100431593Not Available959Open in IMG/M
3300005177|Ga0066690_10612757All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005454|Ga0066687_10558019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300005538|Ga0070731_11075417All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005541|Ga0070733_10613410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300005542|Ga0070732_10229762All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300005542|Ga0070732_10860327All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter553Open in IMG/M
3300005560|Ga0066670_10306359All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300005564|Ga0070664_101623129Not Available613Open in IMG/M
3300005610|Ga0070763_10324401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria851Open in IMG/M
3300005764|Ga0066903_105515937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria667Open in IMG/M
3300005921|Ga0070766_11176807All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005950|Ga0066787_10037504All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter896Open in IMG/M
3300006028|Ga0070717_10052993All Organisms → cellular organisms → Bacteria3344Open in IMG/M
3300006052|Ga0075029_100118394All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300006086|Ga0075019_10154135All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300006163|Ga0070715_10659143All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300006174|Ga0075014_100256406All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300006174|Ga0075014_101008461All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300006175|Ga0070712_101595326Not Available571Open in IMG/M
3300006176|Ga0070765_100205836Not Available1787Open in IMG/M
3300006796|Ga0066665_10244097All Organisms → cellular organisms → Bacteria1417Open in IMG/M
3300006914|Ga0075436_101123307All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009038|Ga0099829_11764888All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300009521|Ga0116222_1124261All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300009525|Ga0116220_10394727All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009700|Ga0116217_10309455All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300009824|Ga0116219_10277306All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300009824|Ga0116219_10596071All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300009839|Ga0116223_10864161All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300010379|Ga0136449_100498259Not Available2116Open in IMG/M
3300010398|Ga0126383_10233196Not Available1793Open in IMG/M
3300010398|Ga0126383_10447982All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300010398|Ga0126383_10450840All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300011120|Ga0150983_11583888All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300012199|Ga0137383_10607117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria800Open in IMG/M
3300012361|Ga0137360_10182450All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300012971|Ga0126369_10431669All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300014489|Ga0182018_10503408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300014489|Ga0182018_10757715All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300014495|Ga0182015_11047644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300014501|Ga0182024_10098872All Organisms → cellular organisms → Bacteria → Acidobacteria4258Open in IMG/M
3300015241|Ga0137418_10997896All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300016341|Ga0182035_11193446All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300016422|Ga0182039_10900175Not Available790Open in IMG/M
3300017822|Ga0187802_10239933Not Available700Open in IMG/M
3300017925|Ga0187856_1005141All Organisms → cellular organisms → Bacteria8483Open in IMG/M
3300017933|Ga0187801_10205077All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300017936|Ga0187821_10278656Not Available659Open in IMG/M
3300017961|Ga0187778_10092737All Organisms → cellular organisms → Bacteria1871Open in IMG/M
3300017974|Ga0187777_10076610All Organisms → cellular organisms → Bacteria2176Open in IMG/M
3300017995|Ga0187816_10045900All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300018006|Ga0187804_10293214All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300018035|Ga0187875_10690008All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300018046|Ga0187851_10771938Not Available541Open in IMG/M
3300018058|Ga0187766_10757311All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300018058|Ga0187766_11119118All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300018085|Ga0187772_10569539Not Available804Open in IMG/M
3300018088|Ga0187771_10906097Not Available748Open in IMG/M
3300018088|Ga0187771_11230213All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300018482|Ga0066669_10968478All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300020579|Ga0210407_10785262Not Available735Open in IMG/M
3300020583|Ga0210401_10289554All Organisms → cellular organisms → Bacteria1498Open in IMG/M
3300021403|Ga0210397_11455061All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300021405|Ga0210387_10913353All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300021406|Ga0210386_11276852All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300021407|Ga0210383_10948704All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300021407|Ga0210383_11689420All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300021407|Ga0210383_11745332All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300021420|Ga0210394_10873550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria783Open in IMG/M
3300021474|Ga0210390_10682037All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300021474|Ga0210390_11530841All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria527Open in IMG/M
3300025412|Ga0208194_1021190Not Available1040Open in IMG/M
3300025625|Ga0208219_1028431Not Available1548Open in IMG/M
3300025812|Ga0208457_1047137Not Available915Open in IMG/M
3300025915|Ga0207693_11356800Not Available530Open in IMG/M
3300025929|Ga0207664_11171355Not Available686Open in IMG/M
3300026078|Ga0207702_10884087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium885Open in IMG/M
3300026508|Ga0257161_1142438All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300026538|Ga0209056_10174159All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300026557|Ga0179587_10810825All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300027266|Ga0209215_1063281All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300027545|Ga0209008_1029607Not Available1274Open in IMG/M
3300027565|Ga0209219_1041173All Organisms → cellular organisms → Bacteria → Acidobacteria1151Open in IMG/M
3300027591|Ga0209733_1162328All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300027706|Ga0209581_1170712All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300027842|Ga0209580_10064796All Organisms → cellular organisms → Bacteria1727Open in IMG/M
3300027854|Ga0209517_10051833All Organisms → cellular organisms → Bacteria → Acidobacteria3090Open in IMG/M
3300027867|Ga0209167_10198884All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300027867|Ga0209167_10277953All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300027889|Ga0209380_10780957All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300027905|Ga0209415_10967897All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300027911|Ga0209698_10646596All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300028801|Ga0302226_10412807Not Available565Open in IMG/M
3300028866|Ga0302278_10116199Not Available1455Open in IMG/M
3300028906|Ga0308309_10163186Not Available1804Open in IMG/M
3300028906|Ga0308309_10477345Not Available1076Open in IMG/M
3300029943|Ga0311340_10290929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1563Open in IMG/M
3300029954|Ga0311331_10922769All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300030058|Ga0302179_10040279All Organisms → cellular organisms → Bacteria2136Open in IMG/M
3300030058|Ga0302179_10198337Not Available886Open in IMG/M
3300030580|Ga0311355_11668626All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300030688|Ga0311345_10256993Not Available1699Open in IMG/M
3300030693|Ga0302313_10233758All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300031057|Ga0170834_100415713All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031231|Ga0170824_108454281All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300031234|Ga0302325_12818660All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300031241|Ga0265325_10517262All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300031258|Ga0302318_10652318All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria531Open in IMG/M
3300031525|Ga0302326_10070645All Organisms → cellular organisms → Bacteria6463Open in IMG/M
3300031708|Ga0310686_109689027All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300031718|Ga0307474_10078107All Organisms → cellular organisms → Bacteria2460Open in IMG/M
3300031823|Ga0307478_11542578All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300031912|Ga0306921_10901358All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1004Open in IMG/M
3300031962|Ga0307479_11689306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300031962|Ga0307479_11700073All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300032160|Ga0311301_12248923Not Available623Open in IMG/M
3300032180|Ga0307471_102011712All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300032770|Ga0335085_10407851All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300032805|Ga0335078_11246315All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300032805|Ga0335078_11661684All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300032892|Ga0335081_10221369Not Available2591Open in IMG/M
3300032954|Ga0335083_10409062All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1157Open in IMG/M
3300032954|Ga0335083_10994486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300033004|Ga0335084_10439270All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300033158|Ga0335077_11603487All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300033158|Ga0335077_11891498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300034163|Ga0370515_0084962Not Available1372Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.58%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil6.06%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.06%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.30%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.55%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.79%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.03%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.03%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.27%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.27%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.52%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.76%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.76%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.76%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.76%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.76%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.76%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.76%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025812Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1027544213300000567Peatlands SoilRYAGAHHYHIVALALEELQRELNSDQRAQLLAKLLDEMHRDDPPN*
JGI12635J15846_1014207813300001593Forest SoilLALEELQRELSTEQRAQLLAKLHEEIDRSMPSGSA*
Ga0062595_10043159333300004479SoilHHYHIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ*
Ga0066690_1061275723300005177SoilPKFSGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNRPNQQ*
Ga0066687_1055801913300005454SoilAHHYHIVALALEELKRELSTEQRAQLLKKLHDEMNPPKPQ*
Ga0070731_1107541723300005538Surface SoilIVSLALEELQRELSTEQRAELLDKLQEEMKRPNPQ*
Ga0070733_1061341023300005541Surface SoilTTDPKFASAHHYHIVALALDELQRELSTDQRAQLLQKLQEEIKRSDPN*
Ga0070732_1022976213300005542Surface SoilHHYHVMALALEELQRELTTEQRADLLRKLQEEMNRPNPQ*
Ga0070732_1086032723300005542Surface SoilFAGAHHYHVMALALEELQRELSTEQRGQLLQKLHDEMNRSNPN*
Ga0066670_1030635943300005560SoilHHYHIVALALEELQRELSTQERSQLLQKLHDEMNRPNPQ*
Ga0070664_10162312913300005564Corn RhizosphereHIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ*
Ga0070763_1032440133300005610SoilHYHIVALALEELQRELTTEQRAQLLQKLQDEVNRPNQQ*
Ga0066903_10551593713300005764Tropical Forest SoilHHYHIVALALEELKRELSTEQRAQLLEKLHEEMNRPNPQ*
Ga0070766_1117680713300005921SoilAGAHHYHIVALALEELKRELTTEQREELLAKLLDEMHRDLPEC*
Ga0066787_1003750413300005950SoilADPKYAGAHHYHVVALALQELRRELTSDQRAATLAKLLDEMHVDDPPSQN*
Ga0070717_1005299363300006028Corn, Switchgrass And Miscanthus RhizosphereDITTDPKFAGAHHYHIVALALEELKRELSTEQRAQLLEKLHDEMNHPGQQ*
Ga0075029_10011839413300006052WatershedsTADSKFAGAHHYHIVALALEELKRELSTEQRIQLLEKLHEEMNRPNPQ*
Ga0075019_1015413543300006086WatershedsHIVALALEELKRELSTEQRAQLLQKLHDEMNHPGQQ*
Ga0070715_1065914313300006163Corn, Switchgrass And Miscanthus RhizosphereSDPQYAGAHHYHIVALALEELQRELKTSQRPELLGKLIREMQQGIAPKKN*
Ga0075014_10025640633300006174WatershedsHHYHIVALALEELQRELSTEQRTELLEKLQQEMNHPNPQ*
Ga0075014_10100846123300006174WatershedsITADPKYSGAHHYHIVALALEELQRELTTEQRAQLLEKLHQEMNRPNPL*
Ga0070712_10159532613300006175Corn, Switchgrass And Miscanthus RhizosphereGAHHYHIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ*
Ga0070765_10020583643300006176SoilKFAGAHHYHVVALALEELQRELSTDQRAELLQKLLEEMNHPKPS*
Ga0066665_1024409723300006796SoilVHHYHIVALALEELQKELNSDTRAQVLAKLLDELHRKDGSS*
Ga0075436_10112330713300006914Populus RhizosphereYHIVALALEELKRELSTEERAQLLQKLHDEMNRPNQQ*
Ga0099829_1176488813300009038Vadose Zone SoilTADPKFAGTHHYHIVALALEELQRELSTEQRAQLLQKLHDEMNRSNPS*
Ga0116222_112426123300009521Peatlands SoilDPKYAGAHHYHIVAVALEELQRELNGDQRAEVLAKLLDEMYRDHPPSQS*
Ga0116220_1039472713300009525Peatlands SoilRYAGAHHYHVVALALEELKRELTTEQRAALLAKLLDEMHRDSGAN*
Ga0116217_1030945513300009700Peatlands SoilVALALEELQRELSTEQRAELLQKLHDEMNRFNPQ*
Ga0116219_1027730623300009824Peatlands SoilTDPKFAGAHHYHIVALALEELQRELSTDQRAQLLDKLQEEMRRSNPN*
Ga0116219_1059607113300009824Peatlands SoilHIVALALEELRREMSTEQRAELLQKLQEEMRRSEPN*
Ga0116223_1086416123300009839Peatlands SoilDPKYAGAHHYHVVALALEELRRELNSDVRAELLAKLLDEMNGDKPPGQS*
Ga0136449_10049825913300010379Peatlands SoilTDPKYAGAHHYHIVALALEELRREMSTEQRAELLQKLQEEMRRSEPN*
Ga0126383_1023319613300010398Tropical Forest SoilITADPKFAGAHHYHIVALALEELKRELSTEQRAQLLEKLHDEMNRPNPQ*
Ga0126383_1044798213300010398Tropical Forest SoilTCDPKFAGAHHYHIVALALEELQKELSTEQRAELLQKLHDEMNRPNQQ*
Ga0126383_1045084013300010398Tropical Forest SoilKYAGAHHYHIVALALEELQRELGTDQRAQLLEKLQDEVNRPNQQ*
Ga0150983_1158388813300011120Forest SoilHHYHIVALALEELQRELSTEQRAQLLQKLHEEMNRPNPS*
Ga0137383_1060711733300012199Vadose Zone SoilHIVALALEELQRELSTEQRAQLLQKLHDEMNRSNPS*
Ga0137360_1018245013300012361Vadose Zone SoilHIVALALEELQRELSTEQRAQLLQKLQEEMGRPDSTRIQ*
Ga0126369_1043166913300012971Tropical Forest SoilKFAGAHHYHIVALALEELKRELTTEQRAQLLQKLHDEMNRSTPQ*
Ga0182018_1050340813300014489PalsaTDPKYAGAHHYHIVSLALEELQRELSTEQRAQLLQKLQEEMNRSEPN*
Ga0182018_1075771513300014489PalsaTTDPKFAGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEVNRSGEKSGPPN*
Ga0182015_1104764413300014495PalsaTTDPKFAGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNRSGEKSGPPN*
Ga0182024_1009887243300014501PermafrostSDPKYAGAHHYHIVALALEELQRELKCEQRAALLTKLLDEMHRDDSDPKAN*
Ga0137418_1099789613300015241Vadose Zone SoilGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMGRSSPN*
Ga0182035_1119344613300016341SoilDPKFAGAHHYHIVALALEELKRELSTEQRAQLLEKLHEEMNRPNPQ
Ga0182039_1090017513300016422SoilVHHYHIVALALEELQRELSTEERAHLLAKLQEEMHKDQLPN
Ga0187802_1023993313300017822Freshwater SedimentHYHIVALALEELQRELHSDQRAQLLAKLLDEMHRDDPPN
Ga0187856_100514113300017925PeatlandITTDPKYAAAHHYHIVALALEELQRELGTEQRDQLLEKLQEEMNDPNPQ
Ga0187801_1020507733300017933Freshwater SedimentYHIVALALEELQRELSSEQRAQLLQKLHDEMNRSDQQ
Ga0187821_1027865623300017936Freshwater SedimentIVALALEELQRELTTEQRAQLLQKLHDEMNRPSPQ
Ga0187778_1009273753300017961Tropical PeatlandAGTHHYHIVALALEELRRELSSEQRAELLEKLQEEMKRPNPQ
Ga0187777_1007661013300017974Tropical PeatlandHHYHIVALALEELRRELSSEQRAELLEKLQEEMKRPNPQ
Ga0187816_1004590013300017995Freshwater SedimentPKYSGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNRSNPQ
Ga0187804_1029321413300018006Freshwater SedimentAHHYHIVALALEELKRELTTEQRAQLLEKLHEEMNHPNPQ
Ga0187875_1069000813300018035PeatlandITTDPRFAGAHHYHIVALALEELQRELSTDQRAELLQKLQEEMRRSEPE
Ga0187851_1077193813300018046PeatlandAGAHHYHIVSLALEELRRELCTEQRAELLQKLQEEMNRSENT
Ga0187766_1075731113300018058Tropical PeatlandHHYHIVALALEELQRELSTEQRAELLQKLQEEMRRTNPS
Ga0187766_1111911813300018058Tropical PeatlandAHHYHIVALALDELQRELTTEQRVQLLEKLQKEMNGPNPQ
Ga0187772_1056953923300018085Tropical PeatlandIVALALEELQRELTTDQRAELLDKLSKEMDHPNPQ
Ga0187771_1090609713300018088Tropical PeatlandHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNHPSQQ
Ga0187771_1123021313300018088Tropical PeatlandITSDPKYAGAHHYHIVALALEELKRELNSEQRAELLTKLLDEMHRDHPPS
Ga0066669_1096847813300018482Grasslands SoilFAGTHHYHIVALALEELQRELTTEQRAQLLQKLHDEMNRSNPQ
Ga0210407_1078526223300020579SoilITKDPKYAGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMRRSNPN
Ga0210401_1028955413300020583SoilIVALALEELQRELSTEQRAQLLQKLQEEMNRSNPN
Ga0210397_1145506113300021403SoilALEELQRELSTEQRAQLLQKLQDEMKAPGSSDKGLDS
Ga0210387_1091335313300021405SoilKFAGAHHYHIVALALEELQRELSTEQRTQLLQKLQEEMNRSSEEPKN
Ga0210386_1127685213300021406SoilHVVALALEELQRELSTDQRAELLQKLLEEMNHPNPS
Ga0210383_1094870423300021407SoilDPRFAGAHHYHIVALALEELQRELSTEQRTQLLQKLQEEMNRSGDGPKN
Ga0210383_1168942023300021407SoilKFAGAHHYHIVALALEELQRELSTEQRTQLLQKLQEEMNRSGDQPKN
Ga0210383_1174533223300021407SoilHHYHIVALALEELRRELSTEQRAQLLDKLQKEMEPPPPQ
Ga0210394_1087355013300021420SoilHHYHVVALALEELQRELSTEQRAQLLQKLQDEINRSNPS
Ga0210390_1068203713300021474SoilHYHVVALALEELQRELSTEQRAQLLQKLQDEINRSNPS
Ga0210390_1153084123300021474SoilAHHYHIVALALEELQRELSTEQRAQLLAKLQDEINRPNPQ
Ga0208194_102119023300025412PeatlandHHYHVIALALEELRRELGTEQRAQLLQKLQEEMNRPDPL
Ga0208219_102843123300025625Arctic Peat SoilAAHHYHIVALALEELKRELSSEQRAALLDKLREEMQRGSSNSS
Ga0208457_104713713300025812PeatlandHHYHIVALALEELRREMSTEQRAELLQKLQEEMRRSEPN
Ga0207693_1135680013300025915Corn, Switchgrass And Miscanthus RhizosphereHHYHIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ
Ga0207664_1117135513300025929Agricultural SoilIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ
Ga0207702_1088408713300026078Corn RhizosphereNITSDPKFSGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNRPNQQ
Ga0257161_114243813300026508SoilHHYHVVALALEELQRELSTDQRAELLQKLLEEMNHPNPS
Ga0209056_1017415923300026538SoilVHHYHIVALALEELQKELNSDTRAQVLAKLLDELHRKDGSS
Ga0179587_1081082523300026557Vadose Zone SoilDPKFAGAHHYHIVALALEELKRELNTEQKAQLLAKLQDEMNTSGENCSPQE
Ga0209215_106328113300027266Forest SoilHYHIVALALEELKRELSTEQRAQLLEKLHDEMNHPGQQ
Ga0209008_102960713300027545Forest SoilTTDPKYAGAHHYHIVALALEELRRELSTEQRTDLLQKLQDEMRRSEPN
Ga0209219_104117313300027565Forest SoilHHYHIVALALEELQRELGSPDRAALLAKLLDEMHNDSPN
Ga0209733_116232823300027591Forest SoilYHIVALALEELRRELNSDTRAEVLAKLLDEMHRDEAPKNLPIKPSS
Ga0209581_117071233300027706Surface SoilYHIVALALEELQRELSTEQRAQLLQKLHDEMNRPNQQ
Ga0209580_1006479623300027842Surface SoilYHVMALALEELQRELSTEQRGQLLQKLHDEMNRSNPN
Ga0209517_1005183313300027854Peatlands SoilYAAAHHYHIVALALEELQRELTTEQRAALLQKLQEEMNGPNPQ
Ga0209167_1019888413300027867Surface SoilPKYAGAHHYHIVALALEELQRELSTEQRAQLLAKLQEEMNRLKPQ
Ga0209167_1027795313300027867Surface SoilHYHIVALALEELQRELTTEQRAQLLQKLHDEMNRSIQQ
Ga0209380_1078095713300027889SoilYAGAHHYHIVALALEELKRELTTEQREELLAKLLDEMHRDLPEC
Ga0209415_1031997813300027905Peatlands SoilHYHIVALALEELQRELKCEQRAALLAKLLDEMHRDDSASKAN
Ga0209415_1096789723300027905Peatlands SoilHHYHVVALALEELKRELTTEQRAALLAKLLDEMHRDSGAN
Ga0209698_1064659623300027911WatershedsHHYHIVALALEELKRELSTEQRAELLQKLSEEMGRPDVPASGKPN
Ga0302226_1041280713300028801PalsaPKFAGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEMNRSGDKSGPPN
Ga0302278_1011619933300028866BogHHYHIVALALEELQRELTTEQRAGLLQKLLEEMRRSETE
Ga0308309_1016318643300028906SoilKFAGAHHYHVVALALEELQRELSTDQRAELLQKLLEEMNHPKPS
Ga0308309_1047734523300028906SoilVHHYHIVALALEELRRELSTEQRTDLLQKLQEEMRRSEPN
Ga0311340_1029092913300029943PalsaPKFAGAHHYHIVALALEELQRELSTEQRTQLLQKLQEEMKGPNSQ
Ga0311331_1092276913300029954BogIVALALEELQRELTTEQRAGLLQKLQEEMRRSETE
Ga0302179_1004027943300030058PalsaAHHYHIVALALEELQRELSTEQRAELLQKLQEEMNRSSPD
Ga0302179_1019833713300030058PalsaALALEELQRELSTEQRAQLLQKLQEEMNGPDSQCQ
Ga0311355_1166862613300030580PalsaAGAHHYHIVALALEELQRELGTEERAQLLAKLQEEIDRSGPTGSTST
Ga0311345_1025699313300030688BogADPKYSAAHHYHIVALALEELQRELTTEQRAGLLQKLQEEMRRSETE
Ga0302313_1023375823300030693PalsaGAHHYHIVALALEELQRELSTEQRAELLQKLLEEMRRSDHASGSSN
Ga0170834_10041571323300031057Forest SoilAGAHHYHIVALALEELQRELSTEQRTELLQKLKEEMTRSESN
Ga0170824_10845428133300031231Forest SoilAHHYHIVALALEELQRELTTDQRAQLLAKLQEEMNRAKPQ
Ga0302325_1281866033300031234PalsaIVALALEELQRELSTEQRAQLLAKLHEEIDRSMPSGSA
Ga0265325_1051726213300031241RhizosphereKYAGAHHYHVVALALEELKRELTTEQRDQLLAKLLDEMHRDLPQC
Ga0302318_1065231823300031258BogPKYSSAHHYHIVALALEELQRELTTEQRAGLLQKLQEEMRRSETE
Ga0302326_1007064513300031525PalsaTDPKFAGAHHYHIVALALEELQRELSTEQRTQLLQKLQEEMNGPNSQGQ
Ga0310686_10968902713300031708SoilITTDPRFAGAHHYHIVALALEELQRELSTEQRAQLLDKLQEEMRRSNPH
Ga0307474_1007810713300031718Hardwood Forest SoilIMALALEELKRELTTEQRAQLLQKLHDEMNPPNPK
Ga0307478_1154257823300031823Hardwood Forest SoilYHVMALALEELQRELSTEQRAQLLQKLQDEINRSTPTGSALE
Ga0306921_1090135813300031912SoilDPKFAGAHHYHIVALALEELKRELSTEQRAQLLEKLHEEMNRLNPQ
Ga0307479_1168930623300031962Hardwood Forest SoilNITTDPKFAGAHHYHIVALALEELQRELTTDQRTQLLEKLQEEMRRSNPN
Ga0307479_1170007313300031962Hardwood Forest SoilAHHYHVVALALEELQRELSTEQRAELLHKLQEEINRTSPSEPC
Ga0311301_1224892313300032160Peatlands SoilIVALALEELQRELTTEQRAALLQKLQEEMNGPNPQ
Ga0307471_10201171233300032180Hardwood Forest SoilPKFAGAHHYHVVALALEELQRELSTEQRTQLLQKLHDEMNRSNPS
Ga0335085_1040785113300032770SoilDPKFAGAHHYHIVALALEELKQELSSDQRAQLLQKLHEEMERPNQQ
Ga0335082_1149329313300032782SoilHHYHIVALALEELKRELNTDQRNELLAKLTDEMNRDVPPKTDT
Ga0335078_1124631543300032805SoilHYHIVALALEELRRELSTEQRAELLEKLHEEMNRTRLQ
Ga0335078_1166168413300032805SoilDITTDPKFAGAHHYHIVALALEELQRELTTEQRAQLLQKLQEEMNRPNQQ
Ga0335081_1022136913300032892SoilTTDPKFAGAHHYHIVALALEELKRELSTEQRAELLQKLHDEMNRTDQQ
Ga0335083_1040906233300032954SoilDPKYAGAHHYHIVALALEELKRELNTDQRNELLAKLTDEMNRDVPPKTDT
Ga0335083_1099448623300032954SoilTADPKFAGAHHYHIVALALEELQRELTTEERAQLLQKLQEEMNRPNQQ
Ga0335084_1043927043300033004SoilHHYHIVALALEELQRELTSEQRAQLLQKLHDEMNRSNPQ
Ga0335077_1160348733300033158SoilHYHIVALALEELQRELTTEQRAQLLEKLHEEMNRSNPQ
Ga0335077_1189149833300033158SoilKDPKFAGAHHYHIVALALEELKRELTSEERIQLLEKLHEEMNRPNQ
Ga0370515_0084962_1225_13713300034163Untreated Peat SoilFAGAHHYHIVALALEELQRELSTEQRAQLLQKLQEEIDRSGDTSCPTN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.