Metagenome / Metatranscriptome Family F061302

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061302
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	85 residues
Representative Sequence	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Number of Associated Samples	110
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.30 %
% of genes near scaffold ends (potentially truncated)	42.42 %
% of genes from short scaffolds (< 2000 bps)	89.39 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.424 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.848 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.22% Coil/Unstructured: 59.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00196	GerE	18.94
PF06745	ATPase	12.88
PF06305	LapA_dom	9.85
PF03631	Virul_fac_BrkB	1.52
PF11716	MDMPI_N	1.52
PF08241	Methyltransf_11	0.76
PF13460	NAD_binding_10	0.76
PF13466	STAS_2	0.76
PF01740	STAS	0.76
PF13411	MerR_1	0.76
PF12840	HTH_20	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	9.85
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
All Organisms	root	All Organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
cellular organisms	root	All Organisms → cellular organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	9.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.79 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	3.03 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.79 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	3.03 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.27 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	2.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3.79 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.03 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	2.27 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples	3.79 %
Kineosporia corallincola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	3.03 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	2.27 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
uncultured Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	3.79 %
Kineosporia corallincola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	3.03 %
Microbacterium sp. F2E	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. F2E	2.27 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig56598	Not Available	1312	Open in IMG/M
2228664022\|INPgaii200_c0868279	Not Available	576	Open in IMG/M
3300000956\|JGI10216J12902_103489208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2245	Open in IMG/M
3300003659\|JGI25404J52841_10053192	Not Available	850	Open in IMG/M
3300004479\|Ga0062595_102026466	Not Available	557	Open in IMG/M
3300005148\|Ga0066819_1023480	Not Available	529	Open in IMG/M
3300005165\|Ga0066869_10148596	Not Available	505	Open in IMG/M
3300005329\|Ga0070683_100722453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	954	Open in IMG/M
3300005330\|Ga0070690_101172843	Not Available	612	Open in IMG/M
3300005334\|Ga0068869_100107158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2121	Open in IMG/M
3300005336\|Ga0070680_100605103	Not Available	941	Open in IMG/M
3300005337\|Ga0070682_100043735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2770	Open in IMG/M
3300005337\|Ga0070682_100103848	Not Available	1881	Open in IMG/M
3300005338\|Ga0068868_102122131	Not Available	535	Open in IMG/M
3300005340\|Ga0070689_100527181	Not Available	1015	Open in IMG/M
3300005343\|Ga0070687_101535752	Not Available	502	Open in IMG/M
3300005355\|Ga0070671_100490062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. F2E	1057	Open in IMG/M
3300005356\|Ga0070674_100718336	Not Available	856	Open in IMG/M
3300005366\|Ga0070659_100485660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1051	Open in IMG/M
3300005367\|Ga0070667_101465956	Not Available	641	Open in IMG/M
3300005438\|Ga0070701_10027085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2804	Open in IMG/M
3300005439\|Ga0070711_100024033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3972	Open in IMG/M
3300005441\|Ga0070700_100129563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1701	Open in IMG/M
3300005441\|Ga0070700_100848168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300005455\|Ga0070663_100396935	Not Available	1127	Open in IMG/M
3300005456\|Ga0070678_100161571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300005539\|Ga0068853_100847356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300005543\|Ga0070672_100873052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. F2E	794	Open in IMG/M
3300005544\|Ga0070686_101316834	Not Available	604	Open in IMG/M
3300005547\|Ga0070693_100697635	Not Available	743	Open in IMG/M
3300005564\|Ga0070664_101181035	Not Available	722	Open in IMG/M
3300005615\|Ga0070702_100085502	Not Available	1900	Open in IMG/M
3300006163\|Ga0070715_10738675	Not Available	592	Open in IMG/M
3300006175\|Ga0070712_100603157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	929	Open in IMG/M
3300006606\|Ga0074062_12573142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1050	Open in IMG/M
3300006854\|Ga0075425_100526855	Not Available	1360	Open in IMG/M
3300006871\|Ga0075434_100049166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4186	Open in IMG/M
3300006871\|Ga0075434_100732898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	1005	Open in IMG/M
3300006903\|Ga0075426_10660795	Not Available	783	Open in IMG/M
3300006904\|Ga0075424_100244793	Not Available	1906	Open in IMG/M
3300006904\|Ga0075424_101356970	Not Available	755	Open in IMG/M
3300006953\|Ga0074063_13643763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	802	Open in IMG/M
3300006953\|Ga0074063_13820625	Not Available	616	Open in IMG/M
3300006954\|Ga0079219_10697487	Not Available	771	Open in IMG/M
3300007076\|Ga0075435_100122154	Not Available	2174	Open in IMG/M
3300009093\|Ga0105240_10516568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1326	Open in IMG/M
3300009098\|Ga0105245_10900111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. F2E	926	Open in IMG/M
3300009101\|Ga0105247_10290561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300009101\|Ga0105247_10381383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1000	Open in IMG/M
3300009162\|Ga0075423_11017021	Not Available	881	Open in IMG/M
3300009176\|Ga0105242_10369037	Not Available	1331	Open in IMG/M
3300009177\|Ga0105248_11027605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	931	Open in IMG/M
3300010147\|Ga0126319_1398343	Not Available	502	Open in IMG/M
3300010147\|Ga0126319_1470915	Not Available	701	Open in IMG/M
3300010154\|Ga0127503_10200458	Not Available	575	Open in IMG/M
3300010154\|Ga0127503_10354496	Not Available	663	Open in IMG/M
3300010154\|Ga0127503_10916872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300010373\|Ga0134128_12535239	Not Available	565	Open in IMG/M
3300010375\|Ga0105239_11735683	Not Available	723	Open in IMG/M
3300010397\|Ga0134124_10019899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5503	Open in IMG/M
3300010397\|Ga0134124_10220930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1730	Open in IMG/M
3300010401\|Ga0134121_10668541	Not Available	981	Open in IMG/M
3300011119\|Ga0105246_10002268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11603	Open in IMG/M
3300011119\|Ga0105246_10685215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	896	Open in IMG/M
3300012200\|Ga0137382_10173515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1472	Open in IMG/M
3300012208\|Ga0137376_11453270	Not Available	576	Open in IMG/M
3300012400\|Ga0134048_1121204	Not Available	638	Open in IMG/M
3300012951\|Ga0164300_10388352	Not Available	763	Open in IMG/M
3300012951\|Ga0164300_10601505	Not Available	649	Open in IMG/M
3300012955\|Ga0164298_10096916	Not Available	1552	Open in IMG/M
3300012955\|Ga0164298_10416728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	873	Open in IMG/M
3300012955\|Ga0164298_11294104	Not Available	558	Open in IMG/M
3300012957\|Ga0164303_10093074	Not Available	1472	Open in IMG/M
3300012957\|Ga0164303_10755998	Not Available	663	Open in IMG/M
3300012960\|Ga0164301_10127828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1514	Open in IMG/M
3300012984\|Ga0164309_10019745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3512	Open in IMG/M
3300012984\|Ga0164309_10515555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	918	Open in IMG/M
3300012985\|Ga0164308_11165335	Not Available	694	Open in IMG/M
3300012985\|Ga0164308_11737884	Not Available	580	Open in IMG/M
3300012986\|Ga0164304_10949575	Not Available	677	Open in IMG/M
3300012987\|Ga0164307_10384101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	1030	Open in IMG/M
3300012987\|Ga0164307_10610780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300012989\|Ga0164305_11792291	Not Available	554	Open in IMG/M
3300013297\|Ga0157378_10151491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2161	Open in IMG/M
3300013307\|Ga0157372_11536095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia corallincola	767	Open in IMG/M
3300014325\|Ga0163163_10041661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4492	Open in IMG/M
3300014326\|Ga0157380_10274892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1538	Open in IMG/M
3300014745\|Ga0157377_11227357	Not Available	582	Open in IMG/M
3300014968\|Ga0157379_10922715	Not Available	829	Open in IMG/M
3300020075\|Ga0206349_1556970	Not Available	746	Open in IMG/M
3300020082\|Ga0206353_10994143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	787	Open in IMG/M
3300021478\|Ga0210402_11295741	Not Available	656	Open in IMG/M
3300022756\|Ga0222622_10206030	Not Available	1308	Open in IMG/M
3300024317\|Ga0247660_1039899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300025321\|Ga0207656_10115718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1244	Open in IMG/M
3300025905\|Ga0207685_10617327	Not Available	583	Open in IMG/M
3300025911\|Ga0207654_10691628	Not Available	732	Open in IMG/M
3300025914\|Ga0207671_10176295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300025916\|Ga0207663_10036758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2947	Open in IMG/M
3300025918\|Ga0207662_10477059	Not Available	856	Open in IMG/M
3300025920\|Ga0207649_10609891	Not Available	840	Open in IMG/M
3300025922\|Ga0207646_11078966	Not Available	707	Open in IMG/M
3300025925\|Ga0207650_11098364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	677	Open in IMG/M
3300025931\|Ga0207644_10441123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300025934\|Ga0207686_11037689	Not Available	666	Open in IMG/M
3300025945\|Ga0207679_11624343	Not Available	592	Open in IMG/M
3300025949\|Ga0207667_12188753	Not Available	510	Open in IMG/M
3300025961\|Ga0207712_10293267	Not Available	1332	Open in IMG/M
3300025986\|Ga0207658_11129541	Not Available	716	Open in IMG/M
3300026023\|Ga0207677_10880507	Not Available	806	Open in IMG/M
3300026035\|Ga0207703_10587855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300026041\|Ga0207639_10430585	Not Available	1194	Open in IMG/M
3300026067\|Ga0207678_11259123	Not Available	655	Open in IMG/M
3300026075\|Ga0207708_10558286	Not Available	966	Open in IMG/M
3300026095\|Ga0207676_10306928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300026095\|Ga0207676_11810712	Not Available	609	Open in IMG/M
3300027775\|Ga0209177_10261303	Not Available	644	Open in IMG/M
3300028379\|Ga0268266_11294169	Not Available	704	Open in IMG/M
3300028380\|Ga0268265_12328562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300028718\|Ga0307307_10115671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.	825	Open in IMG/M
3300028787\|Ga0307323_10121201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	941	Open in IMG/M
3300028799\|Ga0307284_10166628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	856	Open in IMG/M
3300028884\|Ga0307308_10019118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3134	Open in IMG/M
3300031058\|Ga0308189_10317381	Not Available	615	Open in IMG/M
3300031082\|Ga0308192_1036711	Not Available	697	Open in IMG/M
3300031092\|Ga0308204_10251928	Not Available	573	Open in IMG/M
3300032174\|Ga0307470_10345001	Not Available	1030	Open in IMG/M
3300032174\|Ga0307470_10537156	Not Available	861	Open in IMG/M
3300032174\|Ga0307470_10870487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300032180\|Ga0307471_100415697	Not Available	1476	Open in IMG/M
3300032205\|Ga0307472_101054680	Not Available	766	Open in IMG/M
3300032205\|Ga0307472_102424555	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.09%
Host-Associated	Host-Associated	40.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	40.91%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.85%
Freshwater	Environmental → Aquatic → Freshwater	3.79%
Sediment	Environmental → Aquatic → Sediment	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.70%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.09%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.06%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.03%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_09403850	2124908045	Soil	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
INPgaii200_08682791	2228664022	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPXGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
JGI10216J12902_1034892083	3300000956	Soil	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
JGI25404J52841_100531922	3300003659	Tabebuia Heterophylla Rhizosphere	MTGQDNSSYVIIGPDGLQSSDSPHDHPHGDMVHVRLQDGLVHYQTAEDVSGVTYRVGRGGALLIESSKGEVVTAFGPAAWTWVTGAPAKGKA*
Ga0062595_1020264661	3300004479	Soil	DQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAIGDVVTAFGPAAWTWVTGAAAKGKV*
Ga0066819_10234802	3300005148	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0066869_101485962	3300005165	Soil	SDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0070683_1007224532	3300005329	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070690_1011728431	3300005330	Switchgrass Rhizosphere	MVDVRLWDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0068869_1001071583	3300005334	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070680_1006051032	3300005336	Corn Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070682_1000437355	3300005337	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0070682_1001038481	3300005337	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0068868_1021221311	3300005338	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTA
Ga0070689_1005271812	3300005340	Switchgrass Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070687_1015357522	3300005343	Switchgrass Rhizosphere	DSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070671_1004900622	3300005355	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0070674_1007183363	3300005356	Miscanthus Rhizosphere	IVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070659_1004856602	3300005366	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYQLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0070667_1014659561	3300005367	Switchgrass Rhizosphere	KQMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070701_100270852	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070711_1000240334	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0070700_1001295632	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHRDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070700_1008481682	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGDDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0070663_1003969353	3300005455	Corn Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0070678_1001615712	3300005456	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0068853_1008473563	3300005539	Corn Rhizosphere	DSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0070672_1008730522	3300005543	Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIQSAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0070686_1013168342	3300005544	Switchgrass Rhizosphere	PHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070693_1006976352	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0070664_1011810352	3300005564	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0070702_1000855023	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSHQDSSSSVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0070715_107386752	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	DGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0070712_1006031573	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0074062_125731422	3300006606	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDLVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0075425_1005268552	3300006854	Populus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESEKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0075434_1000491661	3300006871	Populus Rhizosphere	QSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYQLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0075434_1007328982	3300006871	Populus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESEKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0075426_106607951	3300006903	Populus Rhizosphere	MSHQDSSSSVIVGSEGLQSSDSPHDHPYDDMVDVRLPDGMVYYRTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0075424_1002447931	3300006904	Populus Rhizosphere	HPYDDMVDVRLPDGMVYYRTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0075424_1013569703	3300006904	Populus Rhizosphere	VIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYQLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0074063_136437632	3300006953	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPGAWTWVTGAAAKGKV*
Ga0074063_138206251	3300006953	Soil	LQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0079219_106974871	3300006954	Agricultural Soil	HGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0075435_1001221545	3300007076	Populus Rhizosphere	MSHQDSSSSVIVGSEGLQWSDSPHDHPYDDMVDVRLPDGMVYYRTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0105240_105165684	3300009093	Corn Rhizosphere	MTDQDNSSYGIVVSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0105245_109001112	3300009098	Miscanthus Rhizosphere	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0105247_102905612	3300009101	Switchgrass Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGHVVTVFGPAAWTWVTGTAAKGKV*
Ga0105247_103813831	3300009101	Switchgrass Rhizosphere	MVDVRLRDGMVHYQTGDDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0075423_110170211	3300009162	Populus Rhizosphere	MVDVRLPDGMVYYRTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0105242_103690372	3300009176	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLASSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0105248_110276052	3300009177	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0126319_13983431	3300010147	Soil	SDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAGKGKV*
Ga0126319_14709152	3300010147	Soil	EGVKQMTGQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0127503_102004581	3300010154	Soil	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0127503_103544962	3300010154	Soil	LIVCPIGEESGVQRKGVEEMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKREVVTVFGPAAWTWVTGAAAKGKV*
Ga0127503_109168721	3300010154	Soil	HGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0134128_125352391	3300010373	Terrestrial Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0105239_117356833	3300010375	Corn Rhizosphere	VDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0134124_100198996	3300010397	Terrestrial Soil	MVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0134124_102209303	3300010397	Terrestrial Soil	MTGQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPATWTWVTGTAAKGKV*
Ga0134121_106685411	3300010401	Terrestrial Soil	MVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0105246_1000226814	3300011119	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0105246_106852151	3300011119	Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWT
Ga0137382_101735152	3300012200	Vadose Zone Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0137376_114532702	3300012208	Vadose Zone Soil	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0134048_11212041	3300012400	Grasslands Soil	KEMTDQDNSSYVIVGSDGLQSRDSPHDHPHGDMVDVQLRDGMVHYQTDEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164300_103883522	3300012951	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDLVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164300_106015051	3300012951	Soil	MSDQDNSSYVIVGSEGLQSSDAPHDHPHGDMVDVRLRDGMVHYQTAEDVGGVAYRLGRGGALLLESAKGEVVTVFGPAAWTWVTGTAAKGKV*
Ga0164298_100969163	3300012955	Soil	DHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0164298_104167282	3300012955	Soil	MTDQDNSSYVIVGSEGLQSSDAPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0164298_112941042	3300012955	Soil	MTDQDNSSYVIVGSEGMQSSDSPHDHPHGDMVDVRLRDGMVHYQTAEDVGGVAYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164303_100930743	3300012957	Soil	EQMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDIVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164303_107559982	3300012957	Soil	MSDQDNSSYVIVGSEGLQSSDAPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0164301_101278282	3300012960	Soil	MTDQDNSSYVIVGSEGLQSSDAPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0164309_100197455	3300012984	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDIVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164309_105155552	3300012984	Soil	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAA
Ga0164308_111653351	3300012985	Soil	MTDQGNSSYVIVGSEGLQSSDSPHDHPHGDIVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164308_117378842	3300012985	Soil	DMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0164304_109495751	3300012986	Soil	HDHPHGDIVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164307_103841012	3300012987	Soil	MTDHDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0164307_106107802	3300012987	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV*
Ga0164305_117922911	3300012989	Soil	MTDQGNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0157378_101514911	3300013297	Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV*
Ga0157372_115360952	3300013307	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0163163_100416611	3300014325	Switchgrass Rhizosphere	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV*
Ga0157380_102748922	3300014326	Switchgrass Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVKVFGPAAWTWVTGTAAKGKV*
Ga0157377_112273571	3300014745	Miscanthus Rhizosphere	YVIVGSEALQSSDSPHDHPHGDVVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALFIESAKGDVVTVFGPAAWKWVTGAAAKGKV*
Ga0157379_109227152	3300014968	Switchgrass Rhizosphere	MVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTW
Ga0206349_15569701	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	HDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0206353_109941432	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYQLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0210402_112957412	3300021478	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0222622_102060301	3300022756	Groundwater Sediment	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV
Ga0247660_10398991	3300024317	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207656_101157182	3300025321	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0207685_106173271	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207654_106916281	3300025911	Corn Rhizosphere	YVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGDDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207671_101762952	3300025914	Corn Rhizosphere	MVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0207663_100367583	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207662_104770593	3300025918	Switchgrass Rhizosphere	SSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207649_106098912	3300025920	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207646_110789662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207650_110983642	3300025925	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAA
Ga0207644_104411232	3300025931	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV
Ga0207686_110376892	3300025934	Miscanthus Rhizosphere	MSDQDNSSYVIVGSEGLASSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0207679_116243431	3300025945	Corn Rhizosphere	SDLYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207667_121887531	3300025949	Corn Rhizosphere	SGKSPVSSRGSKEMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207712_102932671	3300025961	Switchgrass Rhizosphere	GLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207658_111295411	3300025986	Switchgrass Rhizosphere	KQMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207677_108805073	3300026023	Miscanthus Rhizosphere	SEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0207703_105878551	3300026035	Switchgrass Rhizosphere	MSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0207639_104305851	3300026041	Corn Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWPWVTGTAAKGKV
Ga0207678_112591231	3300026067	Corn Rhizosphere	SAGLIVRPIGEESGVQQRGKQMSDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0207708_105582863	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHRDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207676_103069281	3300026095	Switchgrass Rhizosphere	MSDQDNSSYVIVGSEALQSSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIQSAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0207676_118107122	3300026095	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWKWVTGAAAKGKV
Ga0209177_102613031	3300027775	Agricultural Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0268266_112941691	3300028379	Switchgrass Rhizosphere	QDNSSYVIVGSEGLQSSDSPHDHPHGDVVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0268265_123285622	3300028380	Switchgrass Rhizosphere	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPA
Ga0307307_101156712	3300028718	Soil	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEEVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV
Ga0307323_101212012	3300028787	Soil	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPGAWTWVTGAAAKGKV
Ga0307284_101666282	3300028799	Soil	MTDQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGK
Ga0307308_100191184	3300028884	Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV
Ga0308189_103173812	3300031058	Soil	GLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPGAWTWVTGAAAKGKV
Ga0308192_10367112	3300031082	Soil	DQDNSSYVIVGSDGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKREVVTVFGPAAWTWVTGAAAKGKV
Ga0308204_102519282	3300031092	Soil	GLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGAAAKGKV
Ga0307470_103450013	3300032174	Hardwood Forest Soil	MTDQDNSSYVRVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0307470_105371561	3300032174	Hardwood Forest Soil	NSSYVIVGSEGLASSDSPHDHPHGDMVDVRLPDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGAAAKGKV
Ga0307470_108704872	3300032174	Hardwood Forest Soil	MTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWT
Ga0307471_1004156971	3300032180	Hardwood Forest Soil	KEMTDQDNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGEVVTVFGPAAWTWVTGTAAKGKV
Ga0307472_1010546801	3300032205	Hardwood Forest Soil	LQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLGRGGALLIESAKGDVVTVFGPAAWTWVTGTAAKGKV
Ga0307472_1024245552	3300032205	Hardwood Forest Soil	QMTDQGNSSYVIVGSEGLQSSDSPHDHPHGDMVDVRLRDGMVHYQTGEDVGGVTYRLARGGALVIESAKGEVVTVFGPAAWTWVTGAAAKGKV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061302

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences