Metagenome / Metatranscriptome Family F061300

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061300
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	56 residues
Representative Sequence	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPNPVP
Number of Associated Samples	110
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.09 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	93.94 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.424 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.80% β-sheet: 22.78% Coil/Unstructured: 73.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01177	Asp_Glu_race	10.61
PF00069	Pkinase	6.06
PF00892	EamA	2.27
PF04972	BON	1.52
PF07676	PD40	1.52
PF00691	OmpA	1.52
PF03109	ABC1	1.52
PF13466	STAS_2	0.76
PF01370	Epimerase	0.76
PF01740	STAS	0.76
PF01479	S4	0.76
PF09752	ABHD18	0.76
PF02735	Ku	0.76
PF07638	Sigma70_ECF	0.76
PF01872	RibD_C	0.76
PF02518	HATPase_c	0.76
PF00753	Lactamase_B	0.76
PF08241	Methyltransf_11	0.76
PF08240	ADH_N	0.76
PF02371	Transposase_20	0.76
PF13302	Acetyltransf_3	0.76
PF13507	GATase_5	0.76
PF11175	DUF2961	0.76
PF00486	Trans_reg_C	0.76
PF01522	Polysacc_deac_1	0.76
PF13298	LigD_N	0.76
PF12695	Abhydrolase_5	0.76
PF00034	Cytochrom_C	0.76
PF05681	Fumerase	0.76
PF03551	PadR	0.76
PF01436	NHL	0.76
PF00106	adh_short	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	24.24
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	1.52
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.76
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.76
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.76
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.76
COG1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	Energy production and conversion [C]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.12 %
Unclassified	root	N/A	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	41.67 %
Unclassified	root	N/A	9.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.55 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	38.64 %
Unclassified	root	N/A	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.76 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	37.12 %
Unclassified	root	N/A	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.76 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	31.82 %
Unclassified	root	N/A	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.27 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.76 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	31.82 %
Unclassified	root	N/A	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.27 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.76 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	31.82 %
Unclassified	root	N/A	9.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.55 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.76 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.76 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.76 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100183294	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300004092\|Ga0062389_100639645	Not Available	1231	Open in IMG/M
3300004471\|Ga0068965_1252085	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300004473\|Ga0068919_1351599	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300005180\|Ga0066685_10552758	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300005329\|Ga0070683_100559709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1093	Open in IMG/M
3300005330\|Ga0070690_100336933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1091	Open in IMG/M
3300005334\|Ga0068869_101176564	Not Available	673	Open in IMG/M
3300005335\|Ga0070666_10497964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	883	Open in IMG/M
3300005339\|Ga0070660_101540772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	565	Open in IMG/M
3300005364\|Ga0070673_100965397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	792	Open in IMG/M
3300005434\|Ga0070709_11676100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	519	Open in IMG/M
3300005439\|Ga0070711_100114984	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300005535\|Ga0070684_100615514	Not Available	1010	Open in IMG/M
3300005539\|Ga0068853_100261218	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300005541\|Ga0070733_10961866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	573	Open in IMG/M
3300005556\|Ga0066707_10688721	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300005574\|Ga0066694_10184097	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005577\|Ga0068857_100037687	All Organisms → cellular organisms → Bacteria	4283	Open in IMG/M
3300005578\|Ga0068854_101067445	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005712\|Ga0070764_10226140	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300005764\|Ga0066903_100620925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1880	Open in IMG/M
3300005764\|Ga0066903_105626413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	659	Open in IMG/M
3300005921\|Ga0070766_10681083	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300006050\|Ga0075028_100502672	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300006050\|Ga0075028_100880148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	550	Open in IMG/M
3300006050\|Ga0075028_100889349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	548	Open in IMG/M
3300006162\|Ga0075030_100857920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	716	Open in IMG/M
3300006162\|Ga0075030_101340643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	561	Open in IMG/M
3300006163\|Ga0070715_10829750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	563	Open in IMG/M
3300006176\|Ga0070765_100987936	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300006237\|Ga0097621_102302457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	515	Open in IMG/M
3300006358\|Ga0068871_102390201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	504	Open in IMG/M
3300006638\|Ga0075522_10274376	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300006804\|Ga0079221_10584601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300009038\|Ga0099829_11788578	Not Available	503	Open in IMG/M
3300009090\|Ga0099827_10277529	All Organisms → cellular organisms → Bacteria → Acidobacteria	1414	Open in IMG/M
3300009093\|Ga0105240_12330305	Not Available	554	Open in IMG/M
3300009098\|Ga0105245_12768208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	543	Open in IMG/M
3300009523\|Ga0116221_1505966	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009523\|Ga0116221_1532424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	516	Open in IMG/M
3300009525\|Ga0116220_10222395	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300009551\|Ga0105238_10161256	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300009792\|Ga0126374_11086267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	633	Open in IMG/M
3300010048\|Ga0126373_10676655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1089	Open in IMG/M
3300010359\|Ga0126376_12601841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	554	Open in IMG/M
3300010360\|Ga0126372_12967808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	526	Open in IMG/M
3300010361\|Ga0126378_11431443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	783	Open in IMG/M
3300010361\|Ga0126378_13071319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	532	Open in IMG/M
3300010366\|Ga0126379_11401291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	805	Open in IMG/M
3300010366\|Ga0126379_13408119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	532	Open in IMG/M
3300010375\|Ga0105239_13520675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	509	Open in IMG/M
3300010398\|Ga0126383_11428528	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300010399\|Ga0134127_11212017	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010400\|Ga0134122_13092711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	520	Open in IMG/M
3300011064\|Ga0138525_1096308	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300011088\|Ga0138576_1172106	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300011269\|Ga0137392_11616484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	506	Open in IMG/M
3300012202\|Ga0137363_11201468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300012202\|Ga0137363_11291182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	618	Open in IMG/M
3300012206\|Ga0137380_10192284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1853	Open in IMG/M
3300012362\|Ga0137361_10873066	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012362\|Ga0137361_11634816	Not Available	565	Open in IMG/M
3300012683\|Ga0137398_11071923	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012917\|Ga0137395_10145424	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300012931\|Ga0153915_12972955	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012960\|Ga0164301_10347422	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300013296\|Ga0157374_10573539	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300013296\|Ga0157374_10687045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1036	Open in IMG/M
3300013296\|Ga0157374_11374691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	729	Open in IMG/M
3300013308\|Ga0157375_10198420	All Organisms → cellular organisms → Bacteria → Acidobacteria	2162	Open in IMG/M
3300014495\|Ga0182015_10926786	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014654\|Ga0181525_10374134	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300015371\|Ga0132258_12271481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1361	Open in IMG/M
3300016294\|Ga0182041_11300743	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300016294\|Ga0182041_11737769	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300016319\|Ga0182033_10513385	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300016387\|Ga0182040_10490763	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300016404\|Ga0182037_10642019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	904	Open in IMG/M
3300016404\|Ga0182037_10862517	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300016404\|Ga0182037_11204544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	665	Open in IMG/M
3300016404\|Ga0182037_12012975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	518	Open in IMG/M
3300018006\|Ga0187804_10146964	All Organisms → cellular organisms → Bacteria → Acidobacteria	991	Open in IMG/M
3300018034\|Ga0187863_10496393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300020004\|Ga0193755_1079388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300021168\|Ga0210406_10911277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	661	Open in IMG/M
3300021178\|Ga0210408_11077267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	619	Open in IMG/M
3300021406\|Ga0210386_11360166	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021477\|Ga0210398_11486053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	528	Open in IMG/M
3300021478\|Ga0210402_10528759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1095	Open in IMG/M
3300021559\|Ga0210409_11723446	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021560\|Ga0126371_11825985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	729	Open in IMG/M
3300021560\|Ga0126371_13173473	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300025324\|Ga0209640_10652173	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300025913\|Ga0207695_10904774	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300025932\|Ga0207690_10850610	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300025941\|Ga0207711_11360523	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025944\|Ga0207661_11055047	Not Available	748	Open in IMG/M
3300026023\|Ga0207677_11418819	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300026555\|Ga0179593_1167704	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300027889\|Ga0209380_10137070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1428	Open in IMG/M
3300027911\|Ga0209698_10581653	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300027911\|Ga0209698_10927408	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300028536\|Ga0137415_10981549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	656	Open in IMG/M
3300028800\|Ga0265338_11230691	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300029943\|Ga0311340_10655469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	908	Open in IMG/M
3300029999\|Ga0311339_11453106	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300030879\|Ga0265765_1064150	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031234\|Ga0302325_10930152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300031525\|Ga0302326_10490259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1867	Open in IMG/M
3300031525\|Ga0302326_13521031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	520	Open in IMG/M
3300031525\|Ga0302326_13716417	Not Available	502	Open in IMG/M
3300031720\|Ga0307469_10151531	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300031833\|Ga0310917_10993817	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300031910\|Ga0306923_10911463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	962	Open in IMG/M
3300031912\|Ga0306921_11174574	Not Available	856	Open in IMG/M
3300032059\|Ga0318533_11209832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	553	Open in IMG/M
3300032063\|Ga0318504_10553606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	552	Open in IMG/M
3300032174\|Ga0307470_11186220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	619	Open in IMG/M
3300032261\|Ga0306920_102572856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	698	Open in IMG/M
3300032261\|Ga0306920_102918812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	648	Open in IMG/M
3300032783\|Ga0335079_11078923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300032783\|Ga0335079_11951902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	567	Open in IMG/M
3300032805\|Ga0335078_11382284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	797	Open in IMG/M
3300032893\|Ga0335069_12199257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	577	Open in IMG/M
3300032955\|Ga0335076_11376922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	591	Open in IMG/M
3300033405\|Ga0326727_11027504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	597	Open in IMG/M
3300033829\|Ga0334854_050484	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300034115\|Ga0364945_0272530	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.82%
Host-Associated	Host-Associated	18.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.97%
Plants	Host-Associated → Plants	18.18%
Aquatic	Environmental → Aquatic	9.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.36%
Peat	Environmental → Terrestrial → Peat	6.06%
Sediment	Environmental → Aquatic → Sediment	5.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.30%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Roots	Host-Associated → Plants → Roots	1.52%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.24%
Loam	Environmental → Terrestrial → Soil → Loam	10.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.52%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.30%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004471	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1001832943	3300004092	Bog Forest Soil	MTMSSGAFVDLKNLIPGAVLDVETKSRHYHIECLGGNAIRISGHPEYCPTPVPAHLHGSIDKEGALEFGLI
Ga0062389_1006396451	3300004092	Bog Forest Soil	MTSAEFVDCKSLARGCTIDVETKSRHYRIECLGGNVIRISGHPEYCPDPVLAHLHGSVDQEGTLEFGLIGRGK
Ga0068965_12520851	3300004471	Peatlands Soil	MTSVELVDCMSLPPGSLLDVETRNRHYRIECLGGGAIRISGHPEYC
Ga0068919_13515991	3300004473	Peatlands Soil	MTSVELVDCMSLPPGSLLDVETRNRHYRIECLGGGAIRISGHP
Ga0066685_105527581	3300005180	Soil	MTSVELVDCNSLARGSLIDVETKSRHYRIECLGGNAIRISGHPQYCPD
Ga0070683_1005597092	3300005329	Corn Rhizosphere	MTSAEFVDCQSLAPGALVDVETRNRHYRIECLGGSAIRISGHPEYCPTPVEGRLEGSADKAGVLEPGLIGRGRYLK
Ga0070690_1003369333	3300005330	Switchgrass Rhizosphere	MTISTELLDLKNLGPRFSIDVETSSRHYKIECLGGNAIRISGHPEYCPEPVRAWLQGS
Ga0068869_1011765642	3300005334	Miscanthus Rhizosphere	MESTEMLNCENLLPGSMIDVETKSRHYRIECLGGSSIRVSGHPEYCPEPVSASLQGSVDQEGVLE
Ga0070666_104979641	3300005335	Switchgrass Rhizosphere	MTISTELLDLKNLGPSFSIDVETSSRHYKIECLGGNAIRISGHPEYCPEPVRAWLQGSIDREGAMEFGVIGR
Ga0070660_1015407722	3300005339	Corn Rhizosphere	MESTEMLKCDNLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPQYCPEPVSASLQGSVDHEGVLELGFIGCGMRMI
Ga0070673_1009653972	3300005364	Switchgrass Rhizosphere	MQKSGEFLDCAKLRPGSFIEVETKNRHYQIECLGGDAIRISGHPQYCPRLVDARLKGSLNREGLLDHG
Ga0070709_116761001	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAIPQISAELVDCKSLVRGSLIDVETKDRHYRIECLGGNAVRISGHPEYCPDPVRAKLHGSVDKEGIVELGL
Ga0070711_1001149843	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAEFVDCRSLLRGSLIDVETKSRHYRIECLGGNAIRISGHPEYCPDPVPAHL
Ga0070684_1006155142	3300005535	Corn Rhizosphere	MESTEMLKCDNLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPEYCPEPVAASLQGSVDKEGVLE
Ga0068853_1002612184	3300005539	Corn Rhizosphere	MESTEMLKCDNLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPQYCPEPVSASLQGSVDHEGVLELGF
Ga0070733_109618662	3300005541	Surface Soil	VTSAEFVDCRNLPPGSLLDVETRNRHYTIEYLGGNEVRVSGHPEFCPVPVDWKLQ
Ga0066707_106887211	3300005556	Soil	MTSVELVDCNSLARGSLIDVETKSRHYRIECLGGNAIRISGHP
Ga0066694_101840972	3300005574	Soil	MTSVELVDCNSLARGSLIDVETKSRHYRIECLGGNAIRISGHPQYCPDPVPAPLLGSI
Ga0068857_1000376871	3300005577	Corn Rhizosphere	MESTEMLKCENLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPEYCPEP
Ga0068854_1010674452	3300005578	Corn Rhizosphere	MLSTQLLDCRNLVPGSLIDVETKSRHYRIEYLGGNSIRVSGHPEFCPNPVVASLQGSLDRDGTLETGFIACGM
Ga0070764_102261401	3300005712	Soil	MTSAEFVDCKNLRTGSFIDVETTSRHYRIECLGGNAIRISGHPDYCPDPVPAQLHGS
Ga0066903_1006209253	3300005764	Tropical Forest Soil	MISAEFVEFSSLAPGSLLDIETKNRQYHIECLGGRAIRVSGHPEYCPTPVPGTLQGAADKHGLAEPDLIGKGKYFQFLLDHHRP
Ga0066903_1056264131	3300005764	Tropical Forest Soil	SAELVDCNSLAPGSRIDVETKSRHYQIECLGGNALPISAE*
Ga0070766_106810832	3300005921	Soil	MTSAEFVDCKNLTRGSFIDVETTSRHYRIECLGGNAIRISGHPDYCPDPVPAQLHGSVN
Ga0075028_1005026721	3300006050	Watersheds	MTSAEFVDCNNLVRGSMIDVETKSRHYQIECLGGNSIRVSGHPDYCPTPMPAQLQGSLDKEGAL
Ga0075028_1008801481	3300006050	Watersheds	MDSVELLDCSNLAPGSLIDVETKSRHYSIECLGGTAIRISGHPDYCPAPVAARLHGSLDSEGSM
Ga0075028_1008893491	3300006050	Watersheds	VDLKGLSRGSLIDVETMSRHYRIECLRSNAIRISGHLDYCPQPVAAQLSGSIDE
Ga0075030_1008579203	3300006162	Watersheds	MTSAEVVDCTSLASGSVIDVETKSRHYRIECLGGNAINISG
Ga0075030_1013406431	3300006162	Watersheds	MAARLLKKCPEVTIMLSAEMLDCRSLVPGSLIDVETKSRHYRIEYLGGNSIRVSGHPEFCPDPVLASLQGALDQDGTLEVGCIACGLK
Ga0070715_108297501	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQESGEFLDCANLRPGSFIEVETENRHYQIECLGGDAIRISGHPQYCPRPVDARFKG
Ga0070765_1009879362	3300006176	Soil	MTSAEFVDCKKLVTGSLIEVETTSRHYRIECLGGNAIR
Ga0097621_1023024572	3300006237	Miscanthus Rhizosphere	MTSAEFVDCQSLAPGALVDGETRNRHYRIECLGGSAIRISGHPEYCPTPVAGKLQGSSDKAGVLEPGLIGRGRYL
Ga0068871_1023902011	3300006358	Miscanthus Rhizosphere	MTISTELLDLKNLGPRFSIDVETSSRHYKIECLGGNAIRISGHPEYCPEPVRAW
Ga0075522_102743761	3300006638	Arctic Peat Soil	MLPTEMVNCKNLMPGSTIDVETNSRHYRIECLGGNSIRVSGHPDYCPDPVNASLQGSVDQDG
Ga0079221_105846011	3300006804	Agricultural Soil	MQNSAELLDFNRLEPGSVVDVETKSRHYRIECLGGSAVRISGHPQFCP*
Ga0099829_117885781	3300009038	Vadose Zone Soil	VEATMMSTEMLDCTSLTAGSLIDVETKSRHYRIECLGGNSVRISGHPDYCPEPVPAQLQG
Ga0099827_102775291	3300009090	Vadose Zone Soil	MTSAELVDCKSLVCGSLIDVETKSRHYRIECLGGSAIRISGHPEYCPHPVPAQLHGSVDKEGVLEL
Ga0105240_123303052	3300009093	Corn Rhizosphere	MMESTEMLKCDNLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPQYCPEPVSASLQGSVD
Ga0105245_127682082	3300009098	Miscanthus Rhizosphere	MTISTELLDLKNLGPRFSIDVETSSRHYKIECLGGNAIRISGHPEYCPEPVRAWLQGSIDREGAMEF
Ga0116221_15059661	3300009523	Peatlands Soil	MTSAELVDCHNLVRGSLIDVETKSRHYRIECLGGNAIRISGHPEYCPDPVPAQLQGS
Ga0116221_15324241	3300009523	Peatlands Soil	MRSTELLDCKSLEPGSLIDVETTSRHYRIECLGGSSIRISGHPRFCPAPVVAQLE
Ga0116220_102223951	3300009525	Peatlands Soil	MMTSAEYVDFTNLAHGVRIDVETKNRHYLIECLGGGAILISGHPEFCPA
Ga0105238_101612565	3300009551	Corn Rhizosphere	MMASAELLDYKNLAPGSRIDVETKSRHYFIECLGGNSVRISGHPEYCPEPVQAQLEGSVDREGTLEVG
Ga0126374_110862672	3300009792	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRIS
Ga0126373_106766551	3300010048	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPQYCPHPVPAW
Ga0126376_126018411	3300010359	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPNPVP
Ga0126372_129678081	3300010360	Tropical Forest Soil	MTSAELVDCNSLAPGSRIEVETKSRHYQIECLGGNAIRVSGHPEYCPNPVPARVHGSLDKEGGLEFV*
Ga0126378_114314431	3300010361	Tropical Forest Soil	MTSAELVDCNGLAPRSRIDVETKSRHYQIECLGGNAVRISGHPEYCPN
Ga0126378_130713192	3300010361	Tropical Forest Soil	MTSAELVDCNNPASGSRIEVETKSRHYEIECLGGNAIRISGHPEYCPNPV
Ga0126379_114012912	3300010366	Tropical Forest Soil	MTSAELLDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPQYCP
Ga0126379_134081191	3300010366	Tropical Forest Soil	MLPSVELLDFNQLEAGSVVDVETKSRHYQIECLGGSSVRISGHP
Ga0105239_135206751	3300010375	Corn Rhizosphere	MRSAELLDCKSLEPGSLIDVETTSRHYKIECLGGRAIRISGHPQYCPDPVDAEIQGSVTREGFLE
Ga0126383_114285282	3300010398	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHP
Ga0134127_112120171	3300010399	Terrestrial Soil	MLSTQLLDCRNLVPGSLIDVETKSRHYRIEYLGGNSIRVSGHPEFCPNPVVASLQGSLD
Ga0134122_130927111	3300010400	Terrestrial Soil	MLSTQLLDCRNLVPGSLIDVETKSRHYRIEYLGGNSVRVSGHPEFCPNPVNASLHGALDRDGTVEAG
Ga0138525_10963083	3300011064	Peatlands Soil	MTSVELVDCMSLPPGSLLDVETRNRHYRIECLGGGAIRISGHPEYCPSPVPARLQ
Ga0138576_11721063	3300011088	Peatlands Soil	MTSVELVDCMSLPPGSLLDVETRNRHYRIECLGGGAIRISGHPE
Ga0137392_116164842	3300011269	Vadose Zone Soil	MTSAELVDCKSLARGSLVDVETKSRHYRIECLGGNAINISGHPEY
Ga0137363_112014681	3300012202	Vadose Zone Soil	MTSAEFVDCKSLLRGSLIDVETKSRHYRIECLGGNAIRISATLST
Ga0137363_112911823	3300012202	Vadose Zone Soil	MLPCNVFAGADINRLRVGSVLDIETKSRHYQIECLGGSAIRISGHPEYCPRPQAAQLHG
Ga0137380_101922841	3300012206	Vadose Zone Soil	LARGSLIDVETKSRHYRIECLGGNAIRISGHPQYCPDPVPAQLHGSVDKEG
Ga0137361_108730662	3300012362	Vadose Zone Soil	MTSAEFVDCKSLLRGSLIDVETKSRHYRIECLGGNAIRISGHPEYCPDPVPAQLHGSVDRKAYSSWALSGAECA*
Ga0137361_116348162	3300012362	Vadose Zone Soil	MASDAVKKPRMTSAELVDCKSLVRGSLIDVETKNRHYHIVCLGGNAIRISG
Ga0137398_110719232	3300012683	Vadose Zone Soil	MMMSTEMLNCNELAPGSMIDVETKSRHYKIECLGGTDIRVSGHPDYCPEPVRASLQGSVDKEGTLEPGCINRGMRMILLLDEV
Ga0137395_101454242	3300012917	Vadose Zone Soil	MKSAELVDCKSLVRGSLIDVETKNRHYRIECLGGNAIRISGHPEYCPDPVLAQLHGSVDKEG
Ga0153915_129729552	3300012931	Freshwater Wetlands	MVSTEMLDWTSLAPGSLIDVETKSRHYLIECLGGNAVRISGHPEYCPE
Ga0164299_112608812	3300012958	Soil	MGMMSSTMTVEMLDYASLPPGSHVDVETRNRHYRIECLGGSSVRISGHPDYCPTPVEG
Ga0164301_103474221	3300012960	Soil	MMESTEMLNCGNLLPGSMIDVETKSRHYRIECLGGTSVRVSGHPEYCPEPVSASLQGSVDQEGVLELGFIG
Ga0157374_105735393	3300013296	Miscanthus Rhizosphere	MESTEMLNCENLLPGSMIDVETKSRHYRIECLGGSSIRVSGHPEYCPEPVSASLQGSVDQEGVLELGFIGRG
Ga0157374_106870452	3300013296	Miscanthus Rhizosphere	MSSSMTSAEFVDCQSLAPGALVDVETRNRHYRIECLGGSAIRISGHPEYCPTPVEGRLEGSADKAGVLEPGLIGRGR
Ga0157374_113746911	3300013296	Miscanthus Rhizosphere	MLSTQLLDCRNLVPGSLIDVETKSRHYRIEYLGGNSIRVSGHPEFCPNPVVASLQGSLDR
Ga0163162_126515111	3300013306	Switchgrass Rhizosphere	MMTLSQVLAGVDLKTLPSGSLIDVETESRHYQIECLGGNAISISGHPNYCPSPVPAELQGSVDQGGELEL
Ga0157375_101984203	3300013308	Miscanthus Rhizosphere	LIEIETKSRHYRIEYPGGDTIRISGHPEHCPRPVTAQLKGSINEHGVLELGIIKRGMRIMFRLNE
Ga0182015_109267862	3300014495	Palsa	MTSTEFVDCKSLARGSLIDVETKSRHYRIECLGGNAIRISGHPDYCPNPVPAQLQGSLN
Ga0181525_103741341	3300014654	Bog	MTSAEFVDCKSLVRGSFIDVETKSRHYHIECLGGNAIRISGHPEYCPDPVAAQLHGSVNREGTLE
Ga0132258_122714811	3300015371	Arabidopsis Rhizosphere	MTSTEAVDCTNLAGGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPEPV
Ga0182041_113007431	3300016294	Soil	MTSAELVDCKSLAPGSRIEVETKSRHYQIECLGGNSVRISGHPEYCPN
Ga0182041_117377692	3300016294	Soil	MTSAELVDCNSLAPGSRIEVETKSRHYQIECLGGNSVRISGHPEYCP
Ga0182033_105133851	3300016319	Soil	MTSAELVDSHSLAPGSRIEVETKSRHYQIECLGGNVI
Ga0182040_104907631	3300016387	Soil	MTSAELVDYNSLAPGSRIDVETTSRHYQIECLGGNAIRISGHPQYCPHPVPAWLHGSLDKEGALEF
Ga0182037_106420191	3300016404	Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPHPVSAWLHGSLDQ
Ga0182037_108625171	3300016404	Soil	MNMTSAELVDSNSLVPGSRIEVETKSRHYQIECLGGNAIRISGHPEYCPNPVPAR
Ga0182037_112045441	3300016404	Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPE
Ga0182037_120129752	3300016404	Soil	MTSAELVDCNSLAPGSWIDVETKSRHYQIECLGGNSVRISGRPQYCPNPLPARLHGSLD
Ga0187804_101469642	3300018006	Freshwater Sediment	MDTSVEMVDCQNLTPGSLLDVETKTRHYKIECLGGNKIRISGHPEFC
Ga0187863_104963932	3300018034	Peatland	MTSTELVDCNSLVRGSLIDVETKSRHYQIECLGGYAIRISG
Ga0187770_109431102	3300018090	Tropical Peatland	MTSTECVDCAGLPPGSLLEVETRNRQYRIECLGGGAIRISGHPDYCARLVPGR
Ga0193755_10793881	3300020004	Soil	SLVRGSLIDVETKSRHYRIECLGGNAIRISGHPEHCPDPVLAQLHGSVDKEGILELGLIGRGCA
Ga0210406_109112771	3300021168	Soil	MTMASAELLVCKTLAPGSLIDVETKSRHYRIECLGGNAIRISGHPDYCPEPAPAQLQGSVDKEGTL
Ga0210408_110772671	3300021178	Soil	VEAVVTTPAEVLECVRLESLNPGSLIDVETKSHRYHIECLGGETIRISGHPQYCPHPVPARLQGSINKEG
Ga0210386_113601662	3300021406	Soil	MTSAEMVNCNNLAQGSLIDVETKSRHYRIECLGGNAIRISGHPELCPDPVPAQIHGSV
Ga0210398_114860532	3300021477	Soil	MVQFSAEGVNPATLPPGSSIDVETKSRHYRIECLGGREIRISGHPDYCLTPVPAYLHGSINNEGVVVSDLIERG
Ga0210402_105287592	3300021478	Soil	MRSTELLDCKSLEPGSLVDVETTSRHYRIECLGGSLIRISGHPQFCPTP
Ga0210409_117234462	3300021559	Soil	MTSTEFVDCKSLMRGSVIDVETKSRHYRIECLGGSAIRISGHPDYCPDPVPARLHGS
Ga0126371_118259851	3300021560	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAI
Ga0126371_131734731	3300021560	Tropical Forest Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIEWLGGNAIRISGHPKYC
Ga0209640_106521733	3300025324	Soil	MTTISGTLVDLASLSPGSLLDVETKSRHYRIECLGGNAIRISGHPELCPEPVAARLHGSLDKEGSLEIGLI
Ga0207695_109047742	3300025913	Corn Rhizosphere	MVSTEMLKCDNLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPEYCPEPVAASLQGS
Ga0207690_108506101	3300025932	Corn Rhizosphere	MKCENLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPEYCPE
Ga0207711_113605231	3300025941	Switchgrass Rhizosphere	MESTEMLNCENLLPGSMIDVETKSRHYRIECLGGSSIRVSGHPEYCPEPVSASLQGSVDQEGVL
Ga0207661_110550471	3300025944	Corn Rhizosphere	MESTEMLKCENLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPEYCPEPVP
Ga0207677_114188191	3300026023	Miscanthus Rhizosphere	MTTSSTAFVDVKNLIPGALLDVETKSRHYRIECLGGNEVRISGHPDYCPEPVSAFLQG
Ga0179593_11677044	3300026555	Vadose Zone Soil	MRSTELLDCKSLEPGSLIDVETTSRHYRIEYLGGSTIRISGHPRFCPTPVVAHLEGSVTSEGT
Ga0209380_101370703	3300027889	Soil	MRSTEMLDCKSLEPGSFIDVETTSRHYQIECLGGSRIRISGHPRF
Ga0209698_105816531	3300027911	Watersheds	MASIEMLDWTSLAPGSWIDVETKSRHYRIECLGGNAVRISGHPDYCPE
Ga0209698_109274081	3300027911	Watersheds	MESTEMLKCENLLPGSMIDVETKSRHYRIECLGGTSIRVSGHPQYCPDPVPASLQGSVDQEGVLELG
Ga0137415_109815491	3300028536	Vadose Zone Soil	MTSAELVDCNSLARGSLIDVETKSRHYRIECLGGNAIRISGHPQYCPD
Ga0265338_112306912	3300028800	Rhizosphere	MVSMEMLDWTSLAPGSWIDVETKSRRYRIECLGGNAV
Ga0311340_106554691	3300029943	Palsa	MTSAELIDCKSMVRGSLIDVETKSRHYRIECLGGYAIRISGHP
Ga0311339_114531062	3300029999	Palsa	MTSAELIDCKSMVRGSLIDVETKSRHYRIECLGGYAIR
Ga0265765_10641501	3300030879	Soil	MATAELVECKSLERGSLIDVETKSRHYQIECLGGNVIRISGHPEFC
Ga0302325_109301521	3300031234	Palsa	MTSTELLDYRNLANGAVIDVETKSRHYRIECLGGNSINISGHPEYCPQPVSA
Ga0302326_104902592	3300031525	Palsa	MTSAEFVDCTSLAAGSVIDVETKSRHYRIECLGGNAISISGHPEYCPEPVVARLHG
Ga0302326_135210312	3300031525	Palsa	MMSSELLNCKKLERGSLIDVETKSRHYRIECLGGNSIRISGHPDYCPEP
Ga0302326_137164171	3300031525	Palsa	MVLMTSVELVDCAGLAPGSFVDVETKNRHYRIECLGGSDMRISGHPEYCPSPV
Ga0307469_101515312	3300031720	Hardwood Forest Soil	MTSTEFVDCKSLMRGSVIDVETKSRHYRIECLGGNAIRISGHPDYCPDPVPARLHGTVD
Ga0310917_109938171	3300031833	Soil	MTSAELVDSNGLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPKPVPA
Ga0306923_109114632	3300031910	Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPNPVSAW
Ga0306921_111745741	3300031912	Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPHPVSAWLH
Ga0318533_112098321	3300032059	Soil	MTSAELVDPHSLAPGSRIEVETKSRHCQIECLGGNAIRIC
Ga0318504_105536062	3300032063	Soil	MTSAELVDFNSLAPGSRIEVETKSRHYQIECLGGNAVRISGHPEYCPN
Ga0307470_111862201	3300032174	Hardwood Forest Soil	MPSSWHPISLASAELVDCKSLLRGSLIDVETKSRHYRIECLGGNAIRISG
Ga0306920_1025728561	3300032261	Soil	MTSAELVDCNSLAPGSRIDVETKSRHYQIECLGGNAIRISGHPEYCPHPVSAWLHGSLDQEGT
Ga0306920_1029188122	3300032261	Soil	MISAEFVECSSLPPGSLLDIETKNRQYHVECLGGRAIRISGHPEYCPTPVPGTLQ
Ga0335079_110789232	3300032783	Soil	MTSAEVVDCRSLTPGSLVEVETKSRHYHIECLGGNEIRISGHPQICPNPVPARL
Ga0335079_119519022	3300032783	Soil	MLTSAEFVNCDSLPPGSLLDVETKNRHYSIEYLGGGAIRISGHPEYCPTPSRGILLPAVI
Ga0335078_113822842	3300032805	Soil	MRSAEQLDCKSLEPGSLIDVETTSRHYRIECLGGSTVRVSGHPRFCPTPVLAQLEG
Ga0335069_121992572	3300032893	Soil	MMSAEYVDFHCLSPGAVIEVQTKNRHYQIKCLGGDAIRISGHPEYCPDPVPAHLQGSTDKSGVLE
Ga0335076_113769222	3300032955	Soil	MTSAETVDCRSLTPGSLVDVETKSRHYRIECLGGNSIRISGHPV
Ga0326727_110275042	3300033405	Peat Soil	MTSAEYVNCAGLPPGSLLEVETRNRQYRIECLGGGAIRISGHPEYCPNPVPGRVLESG
Ga0334854_050484_2_166	3300033829	Soil	MTSAELVDCKSLVRGSLIDVETKSRHYRIECLGGNAIRISGHPQYCPDPVPAQLQ
Ga0364945_0272530_342_524	3300034115	Sediment	MTSAELIDFQSLTPGSRVDVQTRNRHYQIECLGGNAMRISGHPDYCPDPVPGLLEGSANR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061300

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences