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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F061285 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 132 |
| Average Sequence Length | 44 residues |
| Representative Sequence | LSTFKKHKPLERKVADDLVKTHERNEKLREKKINTSFLDLF |
| Number of Associated Samples | 116 |
| Number of Associated Scaffolds | 132 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 8.11 % |
| % of genes near scaffold ends (potentially truncated) | 41.67 % |
| % of genes from short scaffolds (< 2000 bps) | 54.55 % |
| Associated GOLD sequencing projects | 106 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.44 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (79.545 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (12.121 % of family members) |
| Environment Ontology (ENVO) | Unclassified (57.576 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.667 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 43.48% β-sheet: 0.00% Coil/Unstructured: 56.52% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.44 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 132 Family Scaffolds |
|---|---|---|
| PF06737 | Transglycosylas | 12.88 |
| PF01832 | Glucosaminidase | 8.33 |
| PF06067 | DUF932 | 6.06 |
| PF01464 | SLT | 2.27 |
| PF00534 | Glycos_transf_1 | 1.52 |
| PF00535 | Glycos_transf_2 | 1.52 |
| PF03567 | Sulfotransfer_2 | 1.52 |
| PF05175 | MTS | 1.52 |
| PF01521 | Fe-S_biosyn | 1.52 |
| PF01370 | Epimerase | 1.52 |
| PF00085 | Thioredoxin | 0.76 |
| PF13640 | 2OG-FeII_Oxy_3 | 0.76 |
| PF00154 | RecA | 0.76 |
| PF10985 | DUF2805 | 0.76 |
| PF01755 | Glyco_transf_25 | 0.76 |
| PF00182 | Glyco_hydro_19 | 0.76 |
| PF05050 | Methyltransf_21 | 0.76 |
| PF12705 | PDDEXK_1 | 0.76 |
| PF10688 | Imp-YgjV | 0.76 |
| PF04765 | DUF616 | 0.76 |
| COG ID | Name | Functional Category | % Frequency in 132 Family Scaffolds |
|---|---|---|---|
| COG0316 | Fe-S cluster assembly iron-binding protein IscA | Posttranslational modification, protein turnover, chaperones [O] | 1.52 |
| COG4841 | Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family | Function unknown [S] | 1.52 |
| COG0468 | RecA/RadA recombinase | Replication, recombination and repair [L] | 0.76 |
| COG3179 | Chitinase, GH19 family | Carbohydrate transport and metabolism [G] | 0.76 |
| COG3306 | Glycosyltransferase involved in LPS biosynthesis, GR25 family | Cell wall/membrane/envelope biogenesis [M] | 0.76 |
| COG3979 | Chitodextrinase | Carbohydrate transport and metabolism [G] | 0.76 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 79.55 % |
| All Organisms | root | All Organisms | 20.45 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 12.12% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 9.09% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 8.33% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 7.58% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 6.82% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 6.06% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 6.06% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 6.06% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 6.06% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 4.55% |
| Surface Seawater | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater | 3.79% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 2.27% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 2.27% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 1.52% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine | 1.52% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 1.52% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 1.52% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 1.52% |
| Saline Lake | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake | 1.52% |
| Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 1.52% |
| Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 1.52% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.76% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.76% |
| Freshwater | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater | 0.76% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 0.76% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.76% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 0.76% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.76% |
| Freshwater And Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine | 0.76% |
| Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 0.76% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
| 3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
| 3300000265 | Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10 | Environmental | Open in IMG/M |
| 3300000928 | Marine plume microbial communities from the Columbia River - 25 PSU | Environmental | Open in IMG/M |
| 3300001347 | Pelagic Microbial community sample from North Sea - COGITO 998_met_06 | Environmental | Open in IMG/M |
| 3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
| 3300001938 | Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005 | Environmental | Open in IMG/M |
| 3300001946 | Marine microbial communities from North James Bay, Santigo Island, Equador | Environmental | Open in IMG/M |
| 3300002242 | Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat | Environmental | Open in IMG/M |
| 3300003345 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA | Environmental | Open in IMG/M |
| 3300003617 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA | Environmental | Open in IMG/M |
| 3300004279 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m | Environmental | Open in IMG/M |
| 3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
| 3300004460 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
| 3300004642 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI047_10m_RNA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005239 | Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine | Environmental | Open in IMG/M |
| 3300005913 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1 | Environmental | Open in IMG/M |
| 3300005914 | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ | Environmental | Open in IMG/M |
| 3300005941 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 | Environmental | Open in IMG/M |
| 3300006027 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006164 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA | Environmental | Open in IMG/M |
| 3300006350 | Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m | Environmental | Open in IMG/M |
| 3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006869 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
| 3300007516 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 | Environmental | Open in IMG/M |
| 3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
| 3300007552 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 | Environmental | Open in IMG/M |
| 3300007555 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 | Environmental | Open in IMG/M |
| 3300007609 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG | Environmental | Open in IMG/M |
| 3300007653 | Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3 | Environmental | Open in IMG/M |
| 3300007960 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG | Environmental | Open in IMG/M |
| 3300009002 | Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 | Environmental | Open in IMG/M |
| 3300009086 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 | Environmental | Open in IMG/M |
| 3300009183 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG | Environmental | Open in IMG/M |
| 3300009420 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 | Environmental | Open in IMG/M |
| 3300009441 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome | Environmental | Open in IMG/M |
| 3300009443 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 | Environmental | Open in IMG/M |
| 3300009476 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 | Environmental | Open in IMG/M |
| 3300009495 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 | Environmental | Open in IMG/M |
| 3300009505 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 | Environmental | Open in IMG/M |
| 3300009512 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 | Environmental | Open in IMG/M |
| 3300010297 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA | Environmental | Open in IMG/M |
| 3300010318 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA | Environmental | Open in IMG/M |
| 3300012928 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG | Environmental | Open in IMG/M |
| 3300012936 | Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG | Environmental | Open in IMG/M |
| 3300013010 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA | Environmental | Open in IMG/M |
| 3300016766 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
| 3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
| 3300017721 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG | Environmental | Open in IMG/M |
| 3300017732 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11 | Environmental | Open in IMG/M |
| 3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
| 3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017818 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017985 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018036 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018041 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018421 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019276 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020165 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1 | Environmental | Open in IMG/M |
| 3300020462 | Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986) | Environmental | Open in IMG/M |
| 3300021085 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 | Environmental | Open in IMG/M |
| 3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
| 3300021350 | Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021368 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550 | Environmental | Open in IMG/M |
| 3300021389 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127 | Environmental | Open in IMG/M |
| 3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300021961 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D | Environmental | Open in IMG/M |
| 3300021964 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D | Environmental | Open in IMG/M |
| 3300022066 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2) | Environmental | Open in IMG/M |
| 3300022068 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2) | Environmental | Open in IMG/M |
| 3300022822 | Saline water microbial communities from Ace Lake, Antarctica - #293 | Environmental | Open in IMG/M |
| 3300022841 | Saline water microbial communities from Ace Lake, Antarctica - #291 | Environmental | Open in IMG/M |
| 3300022927 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG | Environmental | Open in IMG/M |
| 3300023273 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG | Environmental | Open in IMG/M |
| 3300023709 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024228 | Seawater microbial communities from Monterey Bay, California, United States - 41D | Environmental | Open in IMG/M |
| 3300024231 | Seawater microbial communities from Monterey Bay, California, United States - 43D | Environmental | Open in IMG/M |
| 3300024266 | Seawater microbial communities from Monterey Bay, California, United States - 75D | Environmental | Open in IMG/M |
| 3300024314 | Seawater microbial communities from Monterey Bay, California, United States - 70D | Environmental | Open in IMG/M |
| 3300024318 | Seawater microbial communities from Monterey Bay, California, United States - 46D | Environmental | Open in IMG/M |
| 3300024321 | Seawater microbial communities from Monterey Bay, California, United States - 31D | Environmental | Open in IMG/M |
| 3300024326 | Seawater microbial communities from Monterey Bay, California, United States - 64D | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300025070 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025085 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025120 | Marine viral communities from the Pacific Ocean - LP-28 (SPAdes) | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025276 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes) | Environmental | Open in IMG/M |
| 3300025543 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025636 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025641 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes) | Environmental | Open in IMG/M |
| 3300025666 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes) | Environmental | Open in IMG/M |
| 3300025684 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025771 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025821 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes) | Environmental | Open in IMG/M |
| 3300025830 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes) | Environmental | Open in IMG/M |
| 3300025879 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026097 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
| 3300026453 | Seawater microbial communities from Monterey Bay, California, United States - 56D | Environmental | Open in IMG/M |
| 3300027188 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes) | Environmental | Open in IMG/M |
| 3300027216 | Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027522 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027714 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300027813 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes) | Environmental | Open in IMG/M |
| 3300028127 | Seawater microbial communities from Monterey Bay, California, United States - 49D | Environmental | Open in IMG/M |
| 3300028130 | Seawater microbial communities from Monterey Bay, California, United States - 22D | Environmental | Open in IMG/M |
| 3300029319 | Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516 | Environmental | Open in IMG/M |
| 3300029448 | Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082 | Environmental | Open in IMG/M |
| 3300032073 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416 | Environmental | Open in IMG/M |
| 3300034166 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSum2010_1000212618 | 3300000101 | Marine | MKNKKLSTFKKKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF* |
| DelMOWin2010_100059839 | 3300000117 | Marine | MAKKPVKKFSTFKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF* |
| LP_A_09_P04_10DRAFT_10129604 | 3300000265 | Marine | NKFSTWKKKKPLERKVADDLVKQSELNDKLREKKLGTDFLDLF* |
| OpTDRAFT_101982061 | 3300000928 | Freshwater And Marine | NKFSTWKKKKPLERKVADDLVKQSETNEKLREKKINPSFLDLF* |
| JGI20156J14371_1000116342 | 3300001347 | Pelagic Marine | MLFINMEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF* |
| JGI24006J15134_1000025140 | 3300001450 | Marine | MAKKPLNKFSTFKKRKPLERRVADSLVKTHERNEKLKEKDINTSFLDLF* |
| GOS2221_10216161 | 3300001938 | Marine | DFPPGKRKSHLRRQTADNLVRTHERNEKLREKKINTSFLDLF* |
| GOS2244_10014782 | 3300001946 | Marine | MANKKTNKFSTWKKKKPLERKVADDLVKQSEINDKLREKSIGTGFLDLF* |
| KVWGV2_108806101 | 3300002242 | Marine Sediment | KRRKSHERKVADDLVKQHERNEKLREKEIGKKFLDLF* |
| JGI26080J50196_10035455 | 3300003345 | Marine | MAKQRTNKLSTFKKHKPLERKVADDLVRTHERNEKLREKKINTSFLDLF* |
| JGI26082J51739_101536941 | 3300003617 | Marine | MAKKKTSKLSTFKKNKPLERKVADDLVRLHERNEKLREKEIGTSFLDLF* |
| Ga0066605_1000608010 | 3300004279 | Marine | MKNKKLSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSFLDLF* |
| Ga0065861_12097771 | 3300004448 | Marine | SKKKTNKLSTFKKHKPLERRVADDLVRLSERNEKLRDKEIGTSFLDLFN* |
| Ga0066222_12744171 | 3300004460 | Marine | MSKKKTNKLSTFKKHKPLERRVADDLVRLSERNEKLRDKEIGTSFLDLFN* |
| Ga0066612_12902481 | 3300004642 | Marine | KLSTFKKKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF* |
| Ga0073579_10933903 | 3300005239 | Marine | MAKKTINKFSTFKKRKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF* |
| Ga0073579_15882981 | 3300005239 | Marine | MAQKKVNKYSTFKKKKPLERRVADDLVRQSEQNEKLREKNIGTSFLDLF* |
| Ga0075108_1000211116 | 3300005913 | Saline Lake | MKKTKTAKLSTFKKHKSLERKVADDLVRLHERNEKLRDKTIDISFLDLF* |
| Ga0075117_11050841 | 3300005914 | Saline Lake | KSLERKVADDLVRLHERNEKLRDKTIDISFLDLF* |
| Ga0070743_1000049712 | 3300005941 | Estuarine | MTKKKTSKLSTFKKNKPLERKVADDLVRLHERNEKLREKEIGTSFLDLF* |
| Ga0075462_101734551 | 3300006027 | Aqueous | INMAKKPVKKFSTFKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF* |
| Ga0075462_101771732 | 3300006027 | Aqueous | NKFSTWKRKKPLERKVADDLVRKSELNDKLRDKKIDTSFLDLF* |
| Ga0075441_100164877 | 3300006164 | Marine | MKKKLSTFKKKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF* |
| Ga0075441_101718162 | 3300006164 | Marine | MAKKRTNKLSTFKKQKPLERRVADDLVRKHERNELLREKDIGTSFLDLF* |
| Ga0099954_15216152 | 3300006350 | Marine | WKKRKPLERKVADDLVKQSELNDKLREKNIGKGFLDLF* |
| Ga0098037_10703121 | 3300006737 | Marine | VNKFSTFIKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF* |
| Ga0098048_100038729 | 3300006752 | Marine | MAKKPINKFSTFKKRKPLERRVADSLVKTHEKNEKLKEKNINTSFLDLF* |
| Ga0075477_100189064 | 3300006869 | Aqueous | LKGKRPKPHTQKVADYLVKKHEENEKLREKRIDTSFLDLF* |
| Ga0075477_104141432 | 3300006869 | Aqueous | KKKKPLERKVADDLVKQHERNEKLREKRIGTGFLDMFN* |
| Ga0098051_11785151 | 3300006924 | Marine | KKPLERKVADDLVKQSEKNEKLREKSIGTSFLDLF* |
| Ga0105050_101289542 | 3300007516 | Freshwater | MKKTKTAKLSTFKKHKSLERKVADDLVRLHERNEKLRDKTIDISFFDLF* |
| Ga0099847_10059868 | 3300007540 | Aqueous | MADKKINKFSTFKKKKPLERRVADDLVRKSEQNEKLREKNINTSFLDLF* |
| Ga0099847_10499195 | 3300007540 | Aqueous | DKKINKFSTFKKKKPLERRVADDLVRKSEQNEKLREKNINTSFLDLF* |
| Ga0102818_10271831 | 3300007552 | Estuarine | TWKKKKPLERKVADDLVKQSELNDKLREKSIGTGFLDLF* |
| Ga0102817_10622692 | 3300007555 | Estuarine | MSSKGKTNKKLSTFKAKKPLERQVADKLVKLSERNDQLKEKTINKDIFDLF* |
| Ga0102817_11178502 | 3300007555 | Estuarine | MAKKTVKKFSTFKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF* |
| Ga0102945_100554012 | 3300007609 | Pond Water | MERTKNSKLSTFKSKKPLERRVADELVKKHETNEKLRQKVIGTSFLDLF* |
| Ga0102868_10837041 | 3300007653 | Estuarine | KPKLKGKRPKPLERKVADDLIKLHERNEKLREKNIKTDFFKLF* |
| Ga0099850_11784601 | 3300007960 | Aqueous | TELKGKRRKPLERKVADDLVKRHELNDRLREKKIDTKFLDLF* |
| Ga0102810_10699023 | 3300009002 | Estuarine | MAKKPINKFSTFKKHKPLERRVADSLVKTHERNEKLKEKNINTSFLDLF* |
| Ga0102812_107243761 | 3300009086 | Estuarine | KKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF* |
| Ga0114974_105481072 | 3300009183 | Freshwater Lake | KGKRPKPLERKVADDLIKIHERNEKLREKNIKTDFFKLF* |
| Ga0114994_100200086 | 3300009420 | Marine | MAKNKSNKFSTFKKRKPLERRVADDLVKKHERNEQLRDKEIGTSFLDLF* |
| Ga0115007_106602311 | 3300009441 | Marine | KSNKFSTWKKQKPLERRVADDLVRQSEKNEKLREKNIDTSFLDLF* |
| Ga0115557_10009102 | 3300009443 | Pelagic Marine | MEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF* |
| Ga0115555_10561171 | 3300009476 | Pelagic Marine | IIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF* |
| Ga0115571_14071012 | 3300009495 | Pelagic Marine | MLFINMEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLGKKEIGTSFLDLF* |
| Ga0115564_104984782 | 3300009505 | Pelagic Marine | MLCINMEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF* |
| Ga0115003_100669443 | 3300009512 | Marine | MKSKKLNKLSTFKKHKPLERKVADTLVKLHERNEELRKKDIGTSFLDKF* |
| Ga0129345_11922331 | 3300010297 | Freshwater To Marine Saline Gradient | KKKPLERKVADNLVKLHERNEKLRDKKIDTSFLDLF* |
| Ga0136656_10243371 | 3300010318 | Freshwater To Marine Saline Gradient | TELKGKRRKPLERKVADDLVKSHELNDRLREKKIDTKFLDLF* |
| Ga0163110_111282231 | 3300012928 | Surface Seawater | KNKFSTWKKRKPLERKVADDLVKQTELNDKLREKNIGKGFLDLF* |
| Ga0163109_102235511 | 3300012936 | Surface Seawater | TWKKKKPLERRVADDLVKKSELNDKLREKKIDTDFLDLF* |
| Ga0163109_103605691 | 3300012936 | Surface Seawater | KKKKPLERRVADDLVKKSELNDKLREKRIDTNFLDLF* |
| Ga0163109_112270822 | 3300012936 | Surface Seawater | LKGKRRKPLERKVADDLVKQHELNDKLREKKINTKFLDLF* |
| Ga0163109_113774741 | 3300012936 | Surface Seawater | KKPLERKVADNLVKKSEQNEKLREKNINTSFLDLF* |
| Ga0129327_104034274 | 3300013010 | Freshwater To Marine Saline Gradient | NKFSTFKKKKPLERRVADDLVRKSEQNEKLREKNINTSFLDLF* |
| Ga0182091_14092612 | 3300016766 | Salt Marsh | KNKFSTWKKKKPLERKIADDLVKQSELNDKLREKKLGTSFLDLF |
| Ga0181369_100019418 | 3300017708 | Marine | MKDKKVNKFSTFKKKKSLERRVADDLVRTHERNEKLRDKNINTSFLDLF |
| Ga0181390_10224754 | 3300017719 | Seawater | MANKKTNKFSTWKKKKPLERKVADDLVKQSEINDKLREKSIGTGFLDLF |
| Ga0181373_10979812 | 3300017721 | Marine | TFKKKKPLERRVADDLVKKSEQNEKLREKNTNTSFLDLF |
| Ga0181415_10574881 | 3300017732 | Seawater | RDRKKPLERKVADDLVKQSELNDKLREKNIGKGFLDLF |
| Ga0181385_10292771 | 3300017764 | Seawater | KKKKPLERIVADNLVKQHERNEKLRDKEIGTTFLDLF |
| Ga0181386_11976941 | 3300017773 | Seawater | LSTFKKKKPLERKVADDLIKKSEQNEKLREKNIDTSFLDLF |
| Ga0181380_100022318 | 3300017782 | Seawater | MAEKKNNKFSTWKKRKPLERKVADDLVKQSELNDKLREKNIGKGFLDLF |
| Ga0181565_109902471 | 3300017818 | Salt Marsh | KKPLERKVADDLVKQHERNEKLREKRIGTSFLDMFN |
| Ga0181590_107916381 | 3300017967 | Salt Marsh | RKNFLPSSKKPLERKVADKLVDTHQKNEKLREKKIGTSFLDLF |
| Ga0181576_104213251 | 3300017985 | Salt Marsh | TWKKKKPLERKVADDLVKRSELNDKLREKNIGTSFLDLF |
| Ga0181600_100868993 | 3300018036 | Salt Marsh | MNMSNKQKNRFSTWKKKKPLERQTADNLVRTHERNEKFREKKINTSFLDLF |
| Ga0181601_1002443810 | 3300018041 | Salt Marsh | NKFSTWKKKKPLERKVADDLVKQHERNEKLREKRIGTSFLDLFN |
| Ga0181592_102928951 | 3300018421 | Salt Marsh | NKFSTWKKKKPLERKVADDLVKQSELNDKLRDKKIGTSFLDLF |
| Ga0182067_15135591 | 3300019276 | Salt Marsh | NKFSTWKKKKPLERKVADKLVNTHERNEKLREKEIGTKFLDMFN |
| Ga0206125_100239757 | 3300020165 | Seawater | MAKKTINKFSTFKKRKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF |
| Ga0211546_103322212 | 3300020462 | Marine | FKRRKSHERKVADDLVKQHERNEKLREKEIGKKFLDLF |
| Ga0206677_102807621 | 3300021085 | Seawater | STWKKKKPLERRVADDLVKKSELNDKLREKKIDTNFLDLF |
| Ga0206682_1000096635 | 3300021185 | Seawater | MKNKKLSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSFLDLF |
| Ga0206692_17314571 | 3300021350 | Seawater | KKPLERKVADDLVKQSEKNEKLREKSIGTSFLDLF |
| Ga0213860_102444022 | 3300021368 | Seawater | MAKKPVKKFSTFKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF |
| Ga0213868_102999503 | 3300021389 | Seawater | FKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF |
| Ga0222717_101656914 | 3300021957 | Estuarine Water | KGKFSTWKKRKPLERQVADKLVKTHERNEKLKDKNINTSFLDLF |
| Ga0222717_101751924 | 3300021957 | Estuarine Water | QLKGKRRKPLERKVADDLVKQHELNDKLREKKINTKFLDLF |
| Ga0222717_102469192 | 3300021957 | Estuarine Water | MAKKPIKKFSTFKKHKPLERRVADSLVKTHERNEKLKEKSINTSFLDLF |
| Ga0222718_103640092 | 3300021958 | Estuarine Water | MAKKPINKFSTFKKRKPLERRVADNLVKTHEKNEKLKEKNINTSFLDLF |
| Ga0222714_103210381 | 3300021961 | Estuarine Water | KRPKPLERKVADDLVKIHERNEKLREKSIKTDFFKLF |
| Ga0222719_102486221 | 3300021964 | Estuarine Water | KKKPLERKVADDLVKKSEQNQKLREKNIGTSFLDLF |
| Ga0222719_105033981 | 3300021964 | Estuarine Water | PIKKFSTFKKHKPLERRVADSLVKTHERNEKLKEKSINTSFLDLF |
| Ga0222719_105566071 | 3300021964 | Estuarine Water | FSTWKKRKPLERQVADKLVKTHERNEKLKEKNINTSFLDLF |
| Ga0224902_1037861 | 3300022066 | Seawater | MKTNKNKKFSTFKRRKSHERKVADDLVRQHERNEKLREIEIGKKFLDLF |
| Ga0212021_10323043 | 3300022068 | Aqueous | STWKKKKPLERRVADDLVKKSELNDKLRDKKIDTSFLDLF |
| Ga0222646_100020121 | 3300022822 | Saline Water | MKKTKTAKLSTFKKHKSLERKVADDLVRLHERNEKLRDKTIDISFFDLF |
| Ga0222644_10101412 | 3300022841 | Saline Water | MKKTKTAKLSTFKKHKSLERKVADDLVRLHERNEKLRDKTIDISFLDLF |
| Ga0255769_102049953 | 3300022927 | Salt Marsh | TWKKKKPLERKVADDLVKQHERNEKLREKRIGTGFLDMFN |
| Ga0255763_13068942 | 3300023273 | Salt Marsh | MSNKQKNRFSTWKKKKPLERQTADNLVRTHERNEKFREKKINTSFLDLF |
| Ga0232122_10437071 | 3300023709 | Salt Marsh | LSTFKKHKPLERKVADDLVKTHERNEKLREKKINTSFLDLF |
| Ga0228633_10690431 | 3300024228 | Seawater | STFKKKKPLERRIADDLVRKSEQNEKLREKDIGTSFLDLF |
| Ga0233399_11397842 | 3300024231 | Seawater | KKKKPLERRIADDLVRKSEQNEKLREKDIGTSFLDLF |
| Ga0228661_10046248 | 3300024266 | Seawater | FSTFKKKKPLERRVADDLVKKSEQNEKLREKNIGTSFLDLF |
| Ga0228657_10694441 | 3300024314 | Seawater | KKKKPLERRVADDLVKKSEQNEKLREKNIGTSFLDLF |
| Ga0233400_10358321 | 3300024318 | Seawater | MKNKKLSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSFL |
| Ga0228626_10399424 | 3300024321 | Seawater | FIIMKNKKLSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSFLDLF |
| Ga0228652_10473733 | 3300024326 | Seawater | MKNKKLSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSF |
| Ga0244775_1000078716 | 3300024346 | Estuarine | MTKKKTSKLSTFKKNKPLERKVADDLVRLHERNEKLREKEIGTSFLDLF |
| Ga0208667_10730732 | 3300025070 | Marine | MAKKPINKFSTFKKRKPLERRVADSLVKTHEKNEKLKEKNINTSFLDLF |
| Ga0208792_10174401 | 3300025085 | Marine | TFKAKKPLERKVADKLVDTHQKNEKLREKKIDTSFLDLF |
| Ga0209535_10223979 | 3300025120 | Marine | KPINKFSTFKKHKPLERRVADSLVKTHERNEKLKEKNINTSFLDLF |
| Ga0209336_1000677412 | 3300025137 | Marine | MAKKPINKFSTFKKHKPLERRVADSLVKTHERNEKLKEKNINTSFLDLF |
| Ga0209336_100758012 | 3300025137 | Marine | MAKKPLNKFSTFKKRKPLERRVADSLVKTHERNEKLKEKDINTSFLDLF |
| Ga0208814_100050811 | 3300025276 | Deep Ocean | MKKKLSTFKKKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF |
| Ga0208303_10058815 | 3300025543 | Aqueous | MADKKINKFSTFKKKKPLERRVADDLVRKSEQNEKLREKNINTSFLDLF |
| Ga0209136_10061328 | 3300025636 | Marine | MAKQRTNKLSTFKKHKPLERKVADDLVRTHERNEKLREKKINTSFLDLF |
| Ga0209136_11821211 | 3300025636 | Marine | FSTFKKKKPLERRIADDLVRKSEQNEKLREKDIGTSFLDLF |
| Ga0209833_10301282 | 3300025641 | Pelagic Marine | MAQKKVNKYSTFKKKKPLERRVADDLVRQSEQNEKLREKNIGTSFLDLF |
| Ga0209601_10137202 | 3300025666 | Pelagic Marine | MLFINMEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF |
| Ga0209652_10297205 | 3300025684 | Marine | MAKKKTSKLSTFKKNKPLERKVADDLVRLHERNEKLREKEIGTSFLDLF |
| Ga0209652_11278682 | 3300025684 | Marine | LFIYMAKQRTNKLSTFKKHKPLERKVADDLVRTHERNEKLREKKINTSFLDLF |
| Ga0208427_10531043 | 3300025771 | Aqueous | LKGKRPKPHTQKVADYLVKKHEENEKLREKRIDTSFLDLF |
| Ga0209600_10106811 | 3300025821 | Pelagic Marine | MEKTKIIKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF |
| Ga0209832_10610564 | 3300025830 | Pelagic Marine | IKFSTFKKSKTVERKVADSLVKLHERNEKLRKKEIGTSFLDLF |
| Ga0209555_102664862 | 3300025879 | Marine | MAKQKAGKLSTFKKHKPLERKIADDLVRTHERNEKLREKKIDTSFLDLF |
| Ga0209953_100311314 | 3300026097 | Pond Water | MERTKNSKLSTFKSKKPLERRVADELVKKHETNEKLRQKVIGTSFLDLF |
| Ga0228644_10246774 | 3300026453 | Seawater | KKPLERKVADDLVKKSELNDKLREKKIDTNFLDLF |
| Ga0208921_10001651 | 3300027188 | Estuarine | FIIMTKKKTSKLSTFKKNKPLERKVADDLVRLHERNEKLREKEIGTSFLDLF |
| Ga0208677_10225543 | 3300027216 | Estuarine | LKGKRPKPLERKVADDLIKLHERNEKLREKNIKTDFFKLF |
| Ga0209384_10091706 | 3300027522 | Marine | MAKKRTNKLSTFKKQKPLERRVADDLVRKHERNELLREKDIGTSFLDLF |
| Ga0209815_11569532 | 3300027714 | Marine | KLSTFKKKKPLERKIADDLVRTHERNEKLRDKNINTSFLDLF |
| Ga0209090_102180192 | 3300027813 | Marine | MAKNKSNKFSTFKKRKPLERRVADDLVKKHERNEQLRDKEIGTSFLDLF |
| Ga0233401_10598061 | 3300028127 | Seawater | KFSTWKKKKPLERQVADKLVKTHERNEKLKEKNINTSFLDLF |
| Ga0228619_10381541 | 3300028130 | Seawater | LSTFKKKKPLERKIADDLVRTHIRNEKLRDKNINTSFLDLF |
| Ga0183748_11234482 | 3300029319 | Marine | VNKFSTFKKKKPLERKVADDLIKKSEQNEKLREKNIGTSFLDLF |
| Ga0183755_10073386 | 3300029448 | Marine | MKLFTFKKKKSHERKVADDLVKLHQRNEKLRNKKINTSFLDLF |
| Ga0315315_101667446 | 3300032073 | Seawater | NKLFINMAKKTVNKFSTFKKHKPLERRVADSLVKTHERNEKLKDKNINTSFLDLF |
| Ga0335016_0748291_3_122 | 3300034166 | Freshwater | KGKRPKPLERKVADDLIKLHERNEKLREKNIKTDFFKLF |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |