Metagenome Family F061253

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061253
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	53 residues
Representative Sequence	VADESLVEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT
Number of Associated Samples	90
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.45 %
% of genes near scaffold ends (potentially truncated)	28.03 %
% of genes from short scaffolds (< 2000 bps)	89.39 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.697 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (28.030 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (29.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.45% β-sheet: 0.00% Coil/Unstructured: 38.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13560	HTH_31	53.03
PF01381	HTH_3	21.21
PF12728	HTH_17	6.82
PF13565	HTH_32	3.79
PF14659	Phage_int_SAM_3	0.76
PF02467	Whib	0.76
PF00376	MerR	0.76
PF13384	HTH_23	0.76
PF00326	Peptidase_S9	0.76
PF13358	DDE_3	0.76
PF14657	Arm-DNA-bind_4	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
All Organisms	root	All Organisms	30.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
cellular organisms	root	All Organisms → cellular organisms	30.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.91 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	3.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.09 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	3.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	3.79 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.52 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	3.79 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.52 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.70 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	3.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.52 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000443\|F12B_10375118	Not Available	616	Open in IMG/M
3300003373\|JGI25407J50210_10002766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4173	Open in IMG/M
3300003373\|JGI25407J50210_10039392	Not Available	1212	Open in IMG/M
3300003373\|JGI25407J50210_10082237	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005186\|Ga0066676_10965688	Not Available	568	Open in IMG/M
3300005347\|Ga0070668_101307363	Not Available	659	Open in IMG/M
3300005562\|Ga0058697_10264770	Not Available	807	Open in IMG/M
3300005562\|Ga0058697_10300273	Not Available	765	Open in IMG/M
3300005981\|Ga0081538_10014609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6138	Open in IMG/M
3300005981\|Ga0081538_10066591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2018	Open in IMG/M
3300005981\|Ga0081538_10292478	Not Available	601	Open in IMG/M
3300005981\|Ga0081538_10326256	Not Available	559	Open in IMG/M
3300006049\|Ga0075417_10045857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1871	Open in IMG/M
3300006058\|Ga0075432_10345871	Not Available	629	Open in IMG/M
3300006169\|Ga0082029_1122528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	3152	Open in IMG/M
3300006845\|Ga0075421_102359436	Not Available	558	Open in IMG/M
3300006846\|Ga0075430_100796860	Not Available	779	Open in IMG/M
3300006847\|Ga0075431_100550875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1141	Open in IMG/M
3300006918\|Ga0079216_10755268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300009100\|Ga0075418_11659177	Not Available	695	Open in IMG/M
3300009147\|Ga0114129_10386762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1846	Open in IMG/M
3300009147\|Ga0114129_10606005	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300009156\|Ga0111538_12177139	Not Available	697	Open in IMG/M
3300009156\|Ga0111538_13069656	Not Available	583	Open in IMG/M
3300009789\|Ga0126307_11027471	Not Available	666	Open in IMG/M
3300009789\|Ga0126307_11623704	Not Available	525	Open in IMG/M
3300009807\|Ga0105061_1016297	Not Available	965	Open in IMG/M
3300009810\|Ga0105088_1022579	Not Available	990	Open in IMG/M
3300009811\|Ga0105084_1109952	Not Available	526	Open in IMG/M
3300009840\|Ga0126313_10363597	Not Available	1142	Open in IMG/M
3300009840\|Ga0126313_10489847	Not Available	983	Open in IMG/M
3300010038\|Ga0126315_10017674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3522	Open in IMG/M
3300010039\|Ga0126309_10945765	Not Available	574	Open in IMG/M
3300010040\|Ga0126308_10076118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2009	Open in IMG/M
3300010040\|Ga0126308_10645343	Not Available	724	Open in IMG/M
3300010040\|Ga0126308_10751407	Not Available	673	Open in IMG/M
3300010041\|Ga0126312_10362133	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1028	Open in IMG/M
3300010041\|Ga0126312_10400093	Not Available	976	Open in IMG/M
3300010042\|Ga0126314_10403251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300010042\|Ga0126314_11225023	Not Available	561	Open in IMG/M
3300010044\|Ga0126310_11605780	Not Available	537	Open in IMG/M
3300010045\|Ga0126311_10343086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300010045\|Ga0126311_10811648	Not Available	755	Open in IMG/M
3300010045\|Ga0126311_11333789	Not Available	597	Open in IMG/M
3300010045\|Ga0126311_11356168	Not Available	592	Open in IMG/M
3300011000\|Ga0138513_100009128	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1209	Open in IMG/M
3300012021\|Ga0120192_10016458	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1131	Open in IMG/M
3300012208\|Ga0137376_11297310	Not Available	618	Open in IMG/M
3300012360\|Ga0137375_10819140	Not Available	747	Open in IMG/M
3300012901\|Ga0157288_10132977	Not Available	720	Open in IMG/M
3300012937\|Ga0162653_100011750	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1068	Open in IMG/M
3300012937\|Ga0162653_100038304	Not Available	714	Open in IMG/M
3300014487\|Ga0182000_10020463	Not Available	1742	Open in IMG/M
3300014487\|Ga0182000_10363175	Not Available	628	Open in IMG/M
3300014487\|Ga0182000_10383407	Not Available	617	Open in IMG/M
3300014488\|Ga0182001_10294227	Not Available	653	Open in IMG/M
3300014488\|Ga0182001_10390674	Not Available	601	Open in IMG/M
3300014497\|Ga0182008_10102156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418	Open in IMG/M
3300014965\|Ga0120193_10084409	Not Available	530	Open in IMG/M
3300017965\|Ga0190266_10054540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1434	Open in IMG/M
3300017965\|Ga0190266_11041035	Not Available	552	Open in IMG/M
3300017997\|Ga0184610_1127137	Not Available	825	Open in IMG/M
3300018027\|Ga0184605_10158896	Not Available	1019	Open in IMG/M
3300018051\|Ga0184620_10338969	Not Available	510	Open in IMG/M
3300018054\|Ga0184621_10147873	Not Available	846	Open in IMG/M
3300018054\|Ga0184621_10180519	Not Available	758	Open in IMG/M
3300018061\|Ga0184619_10107349	Not Available	1258	Open in IMG/M
3300018066\|Ga0184617_1036368	Not Available	1195	Open in IMG/M
3300018072\|Ga0184635_10193305	Not Available	812	Open in IMG/M
3300018076\|Ga0184609_10023969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2450	Open in IMG/M
3300018432\|Ga0190275_13628976	Not Available	500	Open in IMG/M
3300018465\|Ga0190269_10880560	Not Available	658	Open in IMG/M
3300018466\|Ga0190268_10391234	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300018466\|Ga0190268_10734495	Not Available	733	Open in IMG/M
3300019767\|Ga0190267_10148236	Not Available	1022	Open in IMG/M
3300019867\|Ga0193704_1048796	Not Available	831	Open in IMG/M
3300022694\|Ga0222623_10338707	Not Available	575	Open in IMG/M
3300022756\|Ga0222622_10054433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2278	Open in IMG/M
3300026704\|Ga0208581_100090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2325	Open in IMG/M
3300027209\|Ga0209875_1013463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300027577\|Ga0209874_1048808	Not Available	1103	Open in IMG/M
3300027718\|Ga0209795_10123457	Not Available	735	Open in IMG/M
3300027750\|Ga0209461_10045603	Not Available	878	Open in IMG/M
3300027873\|Ga0209814_10042003	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1903	Open in IMG/M
3300027909\|Ga0209382_10449889	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300027909\|Ga0209382_11621560	Not Available	639	Open in IMG/M
3300028712\|Ga0307285_10005011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	2675	Open in IMG/M
3300028717\|Ga0307298_10146133	Not Available	686	Open in IMG/M
3300028722\|Ga0307319_10131948	Not Available	807	Open in IMG/M
3300028722\|Ga0307319_10158124	Not Available	736	Open in IMG/M
3300028771\|Ga0307320_10472474	Not Available	506	Open in IMG/M
3300028787\|Ga0307323_10011658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	2948	Open in IMG/M
3300028793\|Ga0307299_10008032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	3700	Open in IMG/M
3300028799\|Ga0307284_10227976	Not Available	737	Open in IMG/M
3300028814\|Ga0307302_10228939	All Organisms → cellular organisms → Bacteria → Terrabacteria group	909	Open in IMG/M
3300028878\|Ga0307278_10249282	Not Available	788	Open in IMG/M
3300028878\|Ga0307278_10545525	Not Available	505	Open in IMG/M
3300028880\|Ga0307300_10018853	Not Available	1808	Open in IMG/M
3300028884\|Ga0307308_10605708	Not Available	525	Open in IMG/M
3300030510\|Ga0268243_1005048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	2302	Open in IMG/M
3300030510\|Ga0268243_1034819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300030511\|Ga0268241_10079920	Not Available	737	Open in IMG/M
3300030514\|Ga0268253_10212918	Not Available	634	Open in IMG/M
3300030516\|Ga0268255_10042892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1486	Open in IMG/M
3300030516\|Ga0268255_10105720	Not Available	845	Open in IMG/M
3300031548\|Ga0307408_100607806	Not Available	972	Open in IMG/M
3300031731\|Ga0307405_10670141	Not Available	855	Open in IMG/M
3300031731\|Ga0307405_10823302	Not Available	779	Open in IMG/M
3300031852\|Ga0307410_10252380	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1372	Open in IMG/M
3300031852\|Ga0307410_11471808	Not Available	599	Open in IMG/M
3300031901\|Ga0307406_11020708	Not Available	710	Open in IMG/M
3300031903\|Ga0307407_10145902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1532	Open in IMG/M
3300031903\|Ga0307407_10584754	Not Available	829	Open in IMG/M
3300031911\|Ga0307412_10750612	Not Available	842	Open in IMG/M
3300031911\|Ga0307412_10778270	Not Available	829	Open in IMG/M
3300031995\|Ga0307409_100058078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3002	Open in IMG/M
3300031995\|Ga0307409_101701694	Not Available	659	Open in IMG/M
3300031995\|Ga0307409_101966415	Not Available	614	Open in IMG/M
3300031995\|Ga0307409_102835217	Not Available	512	Open in IMG/M
3300031996\|Ga0308176_12892336	Not Available	510	Open in IMG/M
3300032002\|Ga0307416_100291585	Not Available	1615	Open in IMG/M
3300032002\|Ga0307416_101089951	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M
3300032002\|Ga0307416_102426516	Not Available	624	Open in IMG/M
3300032002\|Ga0307416_102496557	Not Available	615	Open in IMG/M
3300032002\|Ga0307416_103057632	Not Available	560	Open in IMG/M
3300032004\|Ga0307414_10959202	Not Available	786	Open in IMG/M
3300032005\|Ga0307411_10338068	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1222	Open in IMG/M
3300032005\|Ga0307411_10678337	Not Available	895	Open in IMG/M
3300032126\|Ga0307415_100295541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300032126\|Ga0307415_100590640	Not Available	986	Open in IMG/M
3300032159\|Ga0268251_10111662	Not Available	988	Open in IMG/M
3300034172\|Ga0334913_019274	Not Available	1534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.09%
Host-Associated	Host-Associated	40.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.76%
Plants	Host-Associated → Plants	40.91%
Aquatic	Environmental → Aquatic	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.55%
Sediment	Environmental → Aquatic → Sediment	8.33%
Roots	Host-Associated → Plants → Roots	5.30%
Phylloplane	Host-Associated → Plants → Phylloplane	5.30%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.27%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.30%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.30%
Sand	Environmental → Terrestrial → Soil → Sand	3.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.27%
Loam	Environmental → Terrestrial → Soil → Loam	1.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.06%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	5.30%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.30%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.52%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.52%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026704	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN606 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F12B_103751182	3300000443	Soil	MTDESLVEAIKTLRRDVEQLQRQLAATRXXXXXXEEELMRLGAMLXKAGRTTGGT*
JGI25407J50210_100027663	3300003373	Tabebuia Heterophylla Rhizosphere	VADESLVEAIEALRREVQQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT*
JGI25407J50210_100393923	3300003373	Tabebuia Heterophylla Rhizosphere	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGVMLLAAGRTTGGT*
JGI25407J50210_100822372	3300003373	Tabebuia Heterophylla Rhizosphere	VADASVVEAIETLRRDVEQLQRQLAATRAWCIGLEEEQTRLGAMLRATDWPTGGT*
Ga0066676_109656881	3300005186	Soil	VADESLVDAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGTMLLAAGRPTGGT*
Ga0070668_1013073632	3300005347	Switchgrass Rhizosphere	LRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0058697_102647702	3300005562	Agave	VADASVVAAIETLRREVDQLQRQLAATRAWCIGLEEEQTRLGAMLRATDWPTGGT*
Ga0058697_103002732	3300005562	Agave	MADESLVEAIEALRRELEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT*
Ga0081538_100146094	3300005981	Tabebuia Heterophylla Rhizosphere	VADASVVEAIETLRRDVEQLQRQLAATRVWCIGLEEEQTRLGAMLRATDWPTGGT*
Ga0081538_100665912	3300005981	Tabebuia Heterophylla Rhizosphere	VADESLVEAINGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLAAGRTTGGT*
Ga0081538_102924781	3300005981	Tabebuia Heterophylla Rhizosphere	VADASVVEAIETLRREVEQLQRQLAATRAWCIGLEEEQTRLGAMLRATDWPTGGT*
Ga0081538_103262561	3300005981	Tabebuia Heterophylla Rhizosphere	MTDESLVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0075417_100458575	3300006049	Populus Rhizosphere	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLVAAGRTTGGT*
Ga0075432_103458711	3300006058	Populus Rhizosphere	MTEESLVEAIKTLRRDLEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0082029_11225285	3300006169	Termite Nest	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT*
Ga0075421_1023594361	3300006845	Populus Rhizosphere	EQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0075430_1007968602	3300006846	Populus Rhizosphere	MTDESLVEAVKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTAGGT*
Ga0075431_1005508751	3300006847	Populus Rhizosphere	MTDESLVEAIKTLRRDLEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0079216_107552682	3300006918	Agricultural Soil	VADESLVEAIKTLRRDVKQLQRQVAATRAWCLGLEEEQVRLGAMLLAASRTTGRT*
Ga0075418_116591772	3300009100	Populus Rhizosphere	MNRQPTRRSSARVPEEDMTEESLVEAIKTLRRDLEQLQRQLAATRAWCVGLEEEQVRLGAMLLAASRTTGGP*
Ga0114129_103867622	3300009147	Populus Rhizosphere	VADESLVEAIKGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLVASRTTGGP*
Ga0114129_106060052	3300009147	Populus Rhizosphere	MNRQPTRRSSARVPEEDMTEESLVEAIKTLRRDLEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0111538_121771391	3300009156	Populus Rhizosphere	VADESLVEAIKTLRRDLEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWPAGGT*
Ga0111538_130696561	3300009156	Populus Rhizosphere	RLCTVKYQEELGVADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTIGRT*
Ga0126307_110274712	3300009789	Serpentine Soil	VEAIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGT*
Ga0126307_116237042	3300009789	Serpentine Soil	VEAIETLRREVEQLQRQLAATRAWCVGLEEEQTRLGAMLQAAGRTTGGT*
Ga0105061_10162971	3300009807	Groundwater Sand	VEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT*
Ga0105088_10225792	3300009810	Groundwater Sand	VEAIEALRREVEQLQRQLAATRACCVGLEEEQMRLGAMLLAAGRTTGGT*
Ga0105084_11099521	3300009811	Groundwater Sand	VADESLVEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTIGGS*
Ga0126313_103635973	3300009840	Serpentine Soil	VEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT*
Ga0126313_104898472	3300009840	Serpentine Soil	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAPGRTTGGT*
Ga0126315_100176741	3300010038	Serpentine Soil	SDGVAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLVAAGRTTGGT*
Ga0126309_109457651	3300010039	Serpentine Soil	VVDESLVEAIKGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLAASRTTGGA*
Ga0126308_100761182	3300010040	Serpentine Soil	VEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAPGRTTGGT*
Ga0126308_106453432	3300010040	Serpentine Soil	MADESVLEAIKILRRDVEQLQRQLAATRAWCVGLEEEQTRLGALVQGCGRASGGN*
Ga0126308_107514071	3300010040	Serpentine Soil	MTDEPLVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT*
Ga0126312_103621331	3300010041	Serpentine Soil	VADESLVEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT*
Ga0126312_104000931	3300010041	Serpentine Soil	VEAIETLRRDVEQLQRQLAATRAWCIGLEEEQTRLGAMLQGAGWPTGGT*
Ga0126314_104032511	3300010042	Serpentine Soil	QRQLAATRAWCLGLEEEQVRLGAMLVAAGRTTGGT*
Ga0126314_112250232	3300010042	Serpentine Soil	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT*
Ga0126310_116057802	3300010044	Serpentine Soil	GVADESLLEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT*
Ga0126311_103430862	3300010045	Serpentine Soil	VEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTKGRT*
Ga0126311_108116481	3300010045	Serpentine Soil	TLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT*
Ga0126311_113337892	3300010045	Serpentine Soil	VTDESLVEAIETLRREVEQLQWQLAATRAWCIGLEEEQMRLGAMLAAGGQQMEPKCLHP*
Ga0126311_113561682	3300010045	Serpentine Soil	MTDESLVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAAGRTTGGT*
Ga0138513_1000091281	3300011000	Soil	VEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTGGT*
Ga0120192_100164581	3300012021	Terrestrial	VEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAVGRTTGGT*
Ga0137376_112973101	3300012208	Vadose Zone Soil	RQLAATRAWCIGLEEEQTRLGTMLRATDKRTGGT*
Ga0137375_108191402	3300012360	Vadose Zone Soil	VGAIETLRREVEQLQRQLAATRAWCLGLEEEQIRLGAMLLAAGRTTGGT*
Ga0157288_101329772	3300012901	Soil	VEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGP*
Ga0162653_1000117503	3300012937	Soil	VADESLVETIKTLRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLLAASRTTG*
Ga0162653_1000383041	3300012937	Soil	VEAIEALRREVEQLQRQLAATRAWCLGLEEELMRLGAMLLAAGRTTGGT*
Ga0182000_100204633	3300014487	Soil	VADESLVEAIKGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLAASRTTGGT*
Ga0182000_103631751	3300014487	Soil	EEMADESVVEAIETLRRDVEQLQRQLAATRAWCVGLEEQQTRLGALVQRGVRTSGRT*
Ga0182000_103834072	3300014487	Soil	MTDESLVEAIKTLRQDVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT*
Ga0182001_102942271	3300014488	Soil	IQTLRREVEQLQRQLAATRAWCLGLEEEQVRLGAILLGAGRTIGGT*
Ga0182001_103906741	3300014488	Soil	VADESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLLAAGRTIGRV*
Ga0182008_101021562	3300014497	Rhizosphere	MNQQPARLCTVKYQEELGVADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTIGRT*
Ga0120193_100844092	3300014965	Terrestrial	VEAIDNLRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT*
Ga0190266_100545403	3300017965	Soil	MTDESVLKAIKTLRRDVEQLQQQLAATRAWCVGLEEEQIRLGAMLQAVGWTTGGT
Ga0190266_110410351	3300017965	Soil	VADESLVEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT
Ga0184610_11271372	3300017997	Groundwater Sediment	VADESLVEAIETLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT
Ga0184605_101588961	3300018027	Groundwater Sediment	MADESVVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT
Ga0184620_103389691	3300018051	Groundwater Sediment	VADESLVEAIETLRRDVEQLQRQLAATRVWCIGLEEEQMRLGSMLAAGGQQVEPKCLHP
Ga0184621_101478732	3300018054	Groundwater Sediment	VTDESLVEAIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGT
Ga0184621_101805191	3300018054	Groundwater Sediment	RDVEQLRRQLAATRAWCVGLEEEQMRLGAMLLAAGRRVGGT
Ga0184619_101073492	3300018061	Groundwater Sediment	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGS
Ga0184617_10363682	3300018066	Groundwater Sediment	VADKSVVEAIETLRRDVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGS
Ga0184635_101933052	3300018072	Groundwater Sediment	VADKSLVEAIETLRRDVQQLQRQLAATRAWCIGLEEEQMRLGAMLAAGGQQVEPKCLHP
Ga0184609_100239691	3300018076	Groundwater Sediment	MADEAVVEAIEALHRDVEQLQRQLAATRAWCVGLEEEQTRLGALVQGCGRTSGRT
Ga0190275_136289762	3300018432	Soil	VTDESLVEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGWTTGG
Ga0190269_108805602	3300018465	Soil	VADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTIGRT
Ga0190268_103912341	3300018466	Soil	MNQQPARLCTVKYQEELGVADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAM
Ga0190268_107344952	3300018466	Soil	MTDESLVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVSWTTGGT
Ga0190267_101482362	3300019767	Soil	VADESLVEAIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGT
Ga0193704_10487961	3300019867	Soil	VADESLVEAIETLRRDVEQLQRQLAATRAWCIGLEEEQMRLGAMLAAGGQQVEPKCLHP
Ga0222623_103387071	3300022694	Groundwater Sediment	VTDESLVQAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT
Ga0222622_100544331	3300022756	Groundwater Sediment	VEAIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGS
Ga0208581_1000902	3300026704	Soil	MTDESVVEAIETLRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLVAAGRTTGGT
Ga0209875_10134632	3300027209	Groundwater Sand	VTDESLVEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT
Ga0209874_10488082	3300027577	Groundwater Sand	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTIGGS
Ga0209795_101234572	3300027718	Agave	EVADASVVEAIETLRREVEQLQRQLAATRAWCIGLEEEQTRLGAMLRATDWPTGGT
Ga0209461_100456032	3300027750	Agave	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTTGGT
Ga0209814_100420035	3300027873	Populus Rhizosphere	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLVAAGRTTGGT
Ga0209382_104498895	3300027909	Populus Rhizosphere	GVADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTIGRT
Ga0209382_116215602	3300027909	Populus Rhizosphere	RDLEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT
Ga0307285_100050112	3300028712	Soil	VADESLVEAIETLRRDVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGS
Ga0307298_101461331	3300028717	Soil	VEAIETLRRDVEQLRRQLAATRAWCVGLEEEQMRLGAMLLAAGRRVGGT
Ga0307319_101319481	3300028722	Soil	MTDESLVEAIKTLRRDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT
Ga0307319_101581241	3300028722	Soil	MEAIETLRQEVKQLQRQLAATRAWCLGLEEEQTRLGAMLQGTGWPTGGS
Ga0307320_104724742	3300028771	Soil	RVAEEPLMEAIETLRQEVKQLQRQLAATRAWCLGLEEEQTRLGAMLQGTGWPTGGS
Ga0307323_100116583	3300028787	Soil	VTDESLVEAIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTIGG
Ga0307299_100080321	3300028793	Soil	VADESLVEAIETLRRDVEQLQRQLAATRAWCIGLEEEQMRLGAMLAAGGQQVPKC
Ga0307284_102279761	3300028799	Soil	SGTRRSEGVADESLVEAIETLRRDVEQLRRQLAATRAWCVGLEEEQMRLGAMLLAAGRRVGGT
Ga0307302_102289393	3300028814	Soil	ETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLVAGRTTGGT
Ga0307278_102492822	3300028878	Soil	VRYQEGEGVADESLVEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLVASRTTGGT
Ga0307278_105455251	3300028878	Soil	VADESLVEAIKTLRQDVEQLQRQLAATRAWCLGLEEEQVRLGAMLLVASRTTGGT
Ga0307300_100188534	3300028880	Soil	VADKSLVEAIETLRRDVEQLQRQLAATRAWCIGLEEEQMRLGAMLAAGGQQVEPKCLHP
Ga0307308_106057082	3300028884	Soil	REVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTIGGS
Ga0268243_10050482	3300030510	Soil	VADESLVEAIKGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLAASRTTGGT
Ga0268243_10348191	3300030510	Soil	MTDESLVEAIKTLRQDVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0268241_100799202	3300030511	Soil	EAIEALRREVEQLQQQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0268253_102129182	3300030514	Agave	VEQLQRQLAATRAWCLGLEEEQMRLGAMLVAAGRTTGGT
Ga0268255_100428922	3300030516	Agave	VTDESLVETIEALRREVEQLQRQLAATRAWCIGLEEEQMRLGAMLLAAGRTTGGT
Ga0268255_101057202	3300030516	Agave	VADASVVEAIETLRREVEQLQRQLAATRAWCIGLEEEQTRLGAMLRATDWLTGGT
Ga0307408_1006078063	3300031548	Rhizosphere	MTDESLVEAIKTLRQDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGGT
Ga0307405_106701412	3300031731	Rhizosphere	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLLAPGRTTGGT
Ga0307405_108233021	3300031731	Rhizosphere	IEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0307410_102523804	3300031852	Rhizosphere	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAPGRTTGGT
Ga0307410_114718082	3300031852	Rhizosphere	GVAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLLAAGRTTGGT
Ga0307406_110207082	3300031901	Rhizosphere	WQPARLCTVKYQEELGVADESLVEAIQTLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTIGRT
Ga0307407_101459021	3300031903	Rhizosphere	VTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0307407_105847542	3300031903	Rhizosphere	VADASVVEAIETLRREVEQLQRQLAATRAWCIGLEEEQTRLGAMLRTTDWPTGGT
Ga0307412_107506121	3300031911	Rhizosphere	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLVAAGRTTGGT
Ga0307412_107782702	3300031911	Rhizosphere	VADESLVEAIETLRQEVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0307409_1000580786	3300031995	Rhizosphere	RREVEQLQRQLAATRAWCIGLEEEQTRLGAMLRTTDWPTGGI
Ga0307409_1017016942	3300031995	Rhizosphere	VEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT
Ga0307409_1019664152	3300031995	Rhizosphere	PWRSKRRDGVTDESLVEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT
Ga0307409_1028352172	3300031995	Rhizosphere	DESLVEAIETLRWDVEQLQRQLAATRAWCVGLEEEQTRLGVVLQGAGWPTGGT
Ga0308176_128923362	3300031996	Soil	DESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0307416_1002915852	3300032002	Rhizosphere	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLVAAGRTTGGT
Ga0307416_1010899511	3300032002	Rhizosphere	LRREVEQLQRQLAATRAWCLGLEEEQVRLGAMLLAAGRTTGGT
Ga0307416_1024265162	3300032002	Rhizosphere	VEAIETLRQEVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0307416_1024965572	3300032002	Rhizosphere	RREVEQLQRQLAATRAWCLGLEEEQTRLGAMLQAAGRTKGRT
Ga0307416_1030576321	3300032002	Rhizosphere	RREVEQLQRQLAATRAWCIGLEEEQMRLGAMLQAASRTTGGT
Ga0307414_109592021	3300032004	Rhizosphere	RSDGVAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAPGRTTGGT
Ga0307411_103380681	3300032005	Rhizosphere	HVPEEDMTDESLVEAIKTLRQDVEQLQRQLAATRAWCVGLEEEQSRLGAMLQAVGWTTGG
Ga0307411_106783372	3300032005	Rhizosphere	VADESLVEAIEALRREVEQLQRQLAATRAWCVGLEEEQMRLGAMLLAAGRTTGGT
Ga0307415_1002955414	3300032126	Rhizosphere	VADESLVEAIETLRREVEQLQRQLAATRAWCLGLEEEQTRLGAMLLAAGRTIGGS
Ga0307415_1005906402	3300032126	Rhizosphere	VAEESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAMLLAAGRTTGGT
Ga0268251_101116623	3300032159	Agave	VADESLVEAIKGLRRDVEELQRQLAATRAWCLGLEEEQVRLGAMLLASSRTTGGT
Ga0334913_019274_853_1020	3300034172	Sub-Biocrust Soil	MTDESLVEAIEALRREVEQLQRQLAATRAWCLGLEEEQMRLGAILLGAGRTIGGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061253

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences