Metagenome / Metatranscriptome Family F061202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	42 residues
Representative Sequence	LRSGKIDPTPLITRTFPLAEAEKAIRFAQQNGVMKVLLKA
Number of Associated Samples	112
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	89.39 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.758 % of family members)
Environment Ontology (ENVO)	Unclassified (25.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.303 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.59% β-sheet: 16.18% Coil/Unstructured: 63.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00731	AIRC	60.61
PF02441	Flavoprotein	6.82
PF05163	DinB	3.79
PF01040	UbiA	2.27
PF12680	SnoaL_2	2.27
PF12705	PDDEXK_1	2.27
PF02746	MR_MLE_N	0.76
PF00202	Aminotran_3	0.76
PF04226	Transgly_assoc	0.76
PF12006	DUF3500	0.76
PF08240	ADH_N	0.76
PF13560	HTH_31	0.76
PF04055	Radical_SAM	0.76
PF12867	DinB_2	0.76
PF00905	Transpeptidase	0.76
PF03471	CorC_HlyC	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.79
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.52
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.30 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.76 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.76 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.76 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107080215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300001593\|JGI12635J15846_10260406	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300001593\|JGI12635J15846_10632214	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300001867\|JGI12627J18819_10434213	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300002245\|JGIcombinedJ26739_101342828	Not Available	607	Open in IMG/M
3300002245\|JGIcombinedJ26739_101746177	Not Available	522	Open in IMG/M
3300002245\|JGIcombinedJ26739_101789144	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300004092\|Ga0062389_100966590	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300004479\|Ga0062595_100882600	Not Available	750	Open in IMG/M
3300005167\|Ga0066672_10236701	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005436\|Ga0070713_100903122	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005436\|Ga0070713_101504941	Not Available	653	Open in IMG/M
3300005439\|Ga0070711_100080322	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005446\|Ga0066686_10108837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1794	Open in IMG/M
3300005545\|Ga0070695_101887301	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005553\|Ga0066695_10321837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	973	Open in IMG/M
3300005555\|Ga0066692_10865020	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300005558\|Ga0066698_10219012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1306	Open in IMG/M
3300005712\|Ga0070764_10169694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1209	Open in IMG/M
3300006173\|Ga0070716_100367179	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006174\|Ga0075014_101009194	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006176\|Ga0070765_102112777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	526	Open in IMG/M
3300006354\|Ga0075021_10845072	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006606\|Ga0074062_11203401	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300006806\|Ga0079220_10929314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	679	Open in IMG/M
3300006806\|Ga0079220_11809094	Not Available	538	Open in IMG/M
3300006881\|Ga0068865_101367069	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300007258\|Ga0099793_10090034	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300007265\|Ga0099794_10397946	Not Available	719	Open in IMG/M
3300009038\|Ga0099829_10109773	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300009088\|Ga0099830_11172012	Not Available	638	Open in IMG/M
3300009143\|Ga0099792_10800484	Not Available	617	Open in IMG/M
3300009615\|Ga0116103_1036454	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300009792\|Ga0126374_11002669	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300010336\|Ga0134071_10142064	Not Available	1163	Open in IMG/M
3300010359\|Ga0126376_13012228	Not Available	521	Open in IMG/M
3300010360\|Ga0126372_10909506	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010362\|Ga0126377_11490732	Not Available	750	Open in IMG/M
3300010877\|Ga0126356_11159500	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300011269\|Ga0137392_10726241	Not Available	822	Open in IMG/M
3300011271\|Ga0137393_10380986	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300011271\|Ga0137393_11267102	Not Available	625	Open in IMG/M
3300012201\|Ga0137365_10979708	Not Available	614	Open in IMG/M
3300012202\|Ga0137363_10023677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4158	Open in IMG/M
3300012202\|Ga0137363_10882422	Not Available	759	Open in IMG/M
3300012203\|Ga0137399_10600796	Not Available	925	Open in IMG/M
3300012203\|Ga0137399_10713112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300012205\|Ga0137362_11323533	Not Available	606	Open in IMG/M
3300012349\|Ga0137387_11280572	Not Available	514	Open in IMG/M
3300012359\|Ga0137385_10332472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300012363\|Ga0137390_10666925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1004	Open in IMG/M
3300012582\|Ga0137358_10060997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2521	Open in IMG/M
3300012917\|Ga0137395_10550012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300012918\|Ga0137396_10397429	Not Available	1021	Open in IMG/M
3300012918\|Ga0137396_10628750	Not Available	794	Open in IMG/M
3300012922\|Ga0137394_11447217	Not Available	547	Open in IMG/M
3300012924\|Ga0137413_10140634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1564	Open in IMG/M
3300012927\|Ga0137416_10218908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1539	Open in IMG/M
3300012931\|Ga0153915_13088154	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014501\|Ga0182024_11794814	Not Available	686	Open in IMG/M
3300015203\|Ga0167650_1127752	Not Available	531	Open in IMG/M
3300016341\|Ga0182035_11346076	Not Available	640	Open in IMG/M
3300016404\|Ga0182037_10074121	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300017936\|Ga0187821_10067351	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300018021\|Ga0187882_1234037	Not Available	715	Open in IMG/M
3300018030\|Ga0187869_10176254	Not Available	1053	Open in IMG/M
3300018086\|Ga0187769_10436201	Not Available	986	Open in IMG/M
3300018468\|Ga0066662_11482525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300020579\|Ga0210407_10362833	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300020579\|Ga0210407_10657562	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300020579\|Ga0210407_11239737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300020580\|Ga0210403_10087867	All Organisms → cellular organisms → Bacteria → Acidobacteria	2512	Open in IMG/M
3300020580\|Ga0210403_10874287	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300020581\|Ga0210399_11342188	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300020583\|Ga0210401_10622978	Not Available	940	Open in IMG/M
3300021088\|Ga0210404_10466836	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300021168\|Ga0210406_10143684	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300021170\|Ga0210400_10061346	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2932	Open in IMG/M
3300021171\|Ga0210405_10250286	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300021180\|Ga0210396_10450488	Not Available	1129	Open in IMG/M
3300021180\|Ga0210396_11113841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300021401\|Ga0210393_10145498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1903	Open in IMG/M
3300021401\|Ga0210393_10350157	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300021405\|Ga0210387_10608270	Not Available	971	Open in IMG/M
3300021405\|Ga0210387_10708535	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300021407\|Ga0210383_10953677	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300021433\|Ga0210391_10236640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1434	Open in IMG/M
3300021433\|Ga0210391_11491565	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021474\|Ga0210390_10143279	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300021474\|Ga0210390_11540550	Not Available	525	Open in IMG/M
3300021475\|Ga0210392_10932615	Not Available	649	Open in IMG/M
3300021478\|Ga0210402_10819933	Not Available	856	Open in IMG/M
3300021479\|Ga0210410_10516164	Not Available	1066	Open in IMG/M
3300024249\|Ga0247676_1073161	Not Available	566	Open in IMG/M
3300025464\|Ga0208076_1067421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300025922\|Ga0207646_10714953	Not Available	895	Open in IMG/M
3300025939\|Ga0207665_10416873	Not Available	1025	Open in IMG/M
3300026320\|Ga0209131_1181853	Not Available	1012	Open in IMG/M
3300026328\|Ga0209802_1268499	Not Available	574	Open in IMG/M
3300026536\|Ga0209058_1329658	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026537\|Ga0209157_1375462	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026557\|Ga0179587_10618489	Not Available	713	Open in IMG/M
3300027042\|Ga0207766_1028063	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027070\|Ga0208365_1025183	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300027173\|Ga0208097_1006630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1217	Open in IMG/M
3300027590\|Ga0209116_1013088	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1673	Open in IMG/M
3300027775\|Ga0209177_10144034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300027783\|Ga0209448_10199149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	664	Open in IMG/M
3300027857\|Ga0209166_10022042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3961	Open in IMG/M
3300027867\|Ga0209167_10059607	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300027867\|Ga0209167_10471065	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300027875\|Ga0209283_10073521	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300027879\|Ga0209169_10272485	Not Available	888	Open in IMG/M
3300027903\|Ga0209488_10662681	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300029636\|Ga0222749_10168880	Not Available	1076	Open in IMG/M
3300030730\|Ga0307482_1182523	Not Available	629	Open in IMG/M
3300030844\|Ga0075377_11550686	Not Available	1022	Open in IMG/M
3300031231\|Ga0170824_104324991	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031708\|Ga0310686_118542388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2335	Open in IMG/M
3300031753\|Ga0307477_10197028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1402	Open in IMG/M
3300031770\|Ga0318521_10866437	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031771\|Ga0318546_10197948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1371	Open in IMG/M
3300031798\|Ga0318523_10552859	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031947\|Ga0310909_10277101	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300031962\|Ga0307479_12123369	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032055\|Ga0318575_10139829	Not Available	1198	Open in IMG/M
3300032063\|Ga0318504_10050475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1746	Open in IMG/M
3300032893\|Ga0335069_10005670	All Organisms → cellular organisms → Bacteria	18302	Open in IMG/M
3300032893\|Ga0335069_11391729	Not Available	759	Open in IMG/M
3300032893\|Ga0335069_11988531	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300033134\|Ga0335073_10001083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	36097	Open in IMG/M
3300033983\|Ga0371488_0257527	Not Available	851	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.42%
Aquatic	Environmental → Aquatic	6.82%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.67%
Freshwater	Environmental → Aquatic → Freshwater	5.30%
Sediment	Environmental → Aquatic → Sediment	1.52%
Peat	Environmental → Terrestrial → Peat	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.97%
Loam	Environmental → Terrestrial → Soil → Loam	15.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1070802152	3300000955	Soil	LRSGKVDPTPLITKTFPLEQAPEAIQFAQKRGVMKVLLKP*
JGI12635J15846_102604062	3300001593	Forest Soil	SLLHTGKVDPHQLITRTFPLSEAPAAIQFAQQPGVMKVLLKPE*
JGI12635J15846_106322141	3300001593	Forest Soil	SEKVDPRPLITRTFPLSEAPTAIKFAQQPGVMKVLLKPE*
JGI12627J18819_104342132	3300001867	Forest Soil	FDKAIALLRSGKVDPRALVTRTFSLSEARAAIRFAPQPGVMKVLLKAV*
JGIcombinedJ26739_1013428281	3300002245	Forest Soil	KVDPTALITRTFPLAEAGKAIQFVQENKVMKVLLKA*
JGIcombinedJ26739_1017461771	3300002245	Forest Soil	TAMALLRSGKVDPAPLITRTFPMSEAPQAIRFAQKPGVMKVLLKA*
JGIcombinedJ26739_1017891441	3300002245	Forest Soil	LITRTFPLSEAPAAIQDAQQPGVMKVLLKPESSL*
Ga0062389_1009665901	3300004092	Bog Forest Soil	DKAIALLYSGKVDLTSLVTRTFSMKGAAAAIRFAQKPGVMKVLLKT*
Ga0062595_1008826002	3300004479	Soil	DKALALLRSGKVDPTPLITRTLPLASVQKAITFAQQSGVMKVLLKPDAVRS*
Ga0066672_102367011	3300005167	Soil	LHSGAVDLKPLITRTFALKEAQKAMAFAESSGVLKVLLKP*
Ga0070713_1009031222	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PAALALLRSGRVDPRPLVSRVFSLKDAAEAIRSAQESSMMKVLLH*
Ga0070713_1015049412	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRAIALLRSGKIDPIPLVTRTFPLAEAPAAIQFAQHPGVMKVLLKVAG*
Ga0070711_1000803221	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GPFVQAIALLRSGKVNPTPLISRVVPLKDAPKAIIYAQKPGVMKVLLKS*
Ga0066686_101088371	3300005446	Soil	KAIALLRAGKVDPRSLVTRTFPLQEAPAAIAFAQKPAVMKVLLKSEYKSLKA*
Ga0070695_1018873011	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GKVDPTPLVTQTFPLAAAPQAIEFAQRRDVMKVLLSPAG*
Ga0066695_103218372	3300005553	Soil	LALLRASKVDPRPLISRTFSLAEAPRAVVHGQRSGVLKVLLKT*
Ga0066692_108650202	3300005555	Soil	IALLRSRKVDPRPLITRRFPLAEAPTAIRFAQQSGVMKVLLKS*
Ga0066698_102190123	3300005558	Soil	RAGKVDPRSLVTRTFPLQEAPAAIAFAQKPAVMKVLLKSEYKSLKA*
Ga0070764_101696941	3300005712	Soil	AIRLLREGKLDPSPLITRTFPLAEAAAAMAYAQEKDVMKVLLKP*
Ga0070716_1003671793	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RKIDPTLLITRGFPLAQAPSAMLFAQKRGVMKVLLRNEN*
Ga0075014_1010091941	3300006174	Watersheds	AKAIALLRSGQVDPTPLISRTFALADAAEAIAYAQGRGVMKVLLRAG*
Ga0070765_1021127772	3300006176	Soil	TKVDPRPLITRTFPLSEAPTAIDYAQQKDVMKVLLKP*
Ga0075021_108450723	3300006354	Watersheds	VNPTPLVTRTYPLAAAQQAVAFAQQTGVMKVLLKA*
Ga0074062_112034011	3300006606	Soil	KVDPVPLITMTFPLADAPKAIRFAQQHGVMKVLLKP*
Ga0079220_109293142	3300006806	Agricultural Soil	RSGQTNPASLITKTFPLAQAAEAIRFAQKPGVMKVLLRP*
Ga0079220_118090942	3300006806	Agricultural Soil	RFEQAIALLRAGTVDPRALITRVFSLDEAERAIEFAQRRGVMKVVLRCC*
Ga0068865_1013670692	3300006881	Miscanthus Rhizosphere	AIALLSSGKVDPRPLITRVFPLGEAPSAIRFGQQPDVMKVLLANG*
Ga0099793_100900341	3300007258	Vadose Zone Soil	VDPRPLITRRFPLAEAPAAIRFAQQSGVMKVLLKS*
Ga0099794_103979461	3300007265	Vadose Zone Soil	KIDLTPLITRAFPLSDAPAAIHFAQARGVMKVLLKPDSGTE*
Ga0099829_101097735	3300009038	Vadose Zone Soil	LRSGRVDPGPLISRIFELKNATDAIRYAQQPGVMKVLLHS*
Ga0099830_111720121	3300009088	Vadose Zone Soil	IDPTPLIIGTFPLSEAQTAIQFAQKKGVMKVLLKP*
Ga0099792_108004842	3300009143	Vadose Zone Soil	TFLRSGKIDLTPLITRTFTLSDAPAAIHFAQWRDAMKVLLKPDSGTE*
Ga0116103_10364543	3300009615	Peatland	PFAKAITLLRSGKVDPTPLISRTFALKAAPQAIAYAQKRGVMKVLLAAASPS*
Ga0126374_110026691	3300009792	Tropical Forest Soil	LGSGQVDPRPLVTCALPLSEAPSAIRYAQQAGVMKVLLENS*
Ga0134071_101420641	3300010336	Grasslands Soil	ALLRSRKVDPRPLITRRFPLAEAPTAIRFAQQSGVMKVLLKS*
Ga0126376_130122281	3300010359	Tropical Forest Soil	FAKAIALLRSGKVDPTPMISRVFELREAATAILFAQRKGTVKVLLQS*
Ga0126372_109095063	3300010360	Tropical Forest Soil	ALLRAGKVDPRPLITRSFSLGEAAAAIRFAQRRGVMKVLLRP*
Ga0126377_114907321	3300010362	Tropical Forest Soil	RLGKVDPRPLITRSFSLGEAAAAIRFAQRRGVMKVLLRP*
Ga0126356_111595001	3300010877	Boreal Forest Soil	KVDPTPQISRTFALKDAPAAIAHAQERGVMKVLLRND*
Ga0137392_107262413	3300011269	Vadose Zone Soil	DPTPLITRKFALAEAPTAIRFAQRPDVMKVLLSS*
Ga0137393_103809861	3300011271	Vadose Zone Soil	EVEPRPLITRIFSLADLSKAIQFAQKHGVMKVLLKP*
Ga0137393_112671022	3300011271	Vadose Zone Soil	PLITRTFSLSNAPAAMHFAQKSGVMKVLLKGHEG*
Ga0137365_109797081	3300012201	Vadose Zone Soil	KAIALLRAGKVDPRSLVTRTFPLQQAPAAIAFAQKPAVMKVLLTSEYKSLKA*
Ga0137363_100236776	3300012202	Vadose Zone Soil	SGKVDPAPLITRTFPLNDAPAALRFAQKSGVMKVLLKGHEG*
Ga0137363_108824222	3300012202	Vadose Zone Soil	EVDPAPLITRTFPLAEAAAAIRFAQQPGVMKVLLRA*
Ga0137399_106007961	3300012203	Vadose Zone Soil	SGEVDPTPLITRTFPLAQAQKAIVFAQKPGVMKVLLKP*
Ga0137399_107131122	3300012203	Vadose Zone Soil	GKVDPTPLITRTFPLKDAAAAIAFAQQYGVMKVLLRT*
Ga0137362_113235331	3300012205	Vadose Zone Soil	IDPTPHITRIFPLAEAEKAIRFAQQNGVMKVLLKA*
Ga0137387_112805721	3300012349	Vadose Zone Soil	RSGKVDPTPLITRTFPLTDAPAAVAFAQQPGVMKVLLHS*
Ga0137385_103324721	3300012359	Vadose Zone Soil	SGKVDPRPLITRRFPLAEASTAIRFAQQSGVMKVLLKS*
Ga0137390_106669251	3300012363	Vadose Zone Soil	GKIDPTPLITRKFALAEAPTAIRFAQRPDVMKVLLSS*
Ga0137358_100609975	3300012582	Vadose Zone Soil	RSLKIDPRPLITRTFALQEASAAMAFAQKPGVMKVLLRGENSQ*
Ga0137395_105500121	3300012917	Vadose Zone Soil	KVDPTPLITRTFPLTDAPAAVAFAQQPGVMKVLLHS*
Ga0137396_103974291	3300012918	Vadose Zone Soil	GEVDPTPLITRTFPLADAQKAIAFAQRTGVMKILLKP*
Ga0137396_106287501	3300012918	Vadose Zone Soil	SGEVDPTPLITCTFPLAEAQKAIAFAQRTGVMKILLKP*
Ga0137394_114472172	3300012922	Vadose Zone Soil	KIDPTPLITRTFPLAEAEKAIRFAQQNGVMKVLLKA*
Ga0137413_101406343	3300012924	Vadose Zone Soil	QAVALLRSGKIDPTALITRTFLLSDAPAAIRFAQEPGVMKVLLKPGSEKG*
Ga0137416_102189083	3300012927	Vadose Zone Soil	RSGKVDPRPLIMHILPLADAQKAMAIAQQSSVMKVLLKS*
Ga0153915_130881542	3300012931	Freshwater Wetlands	SGQVDPTPLISRTFPLAEAPAAIAYAQKPGVMKVLLKRN*
Ga0182024_117948141	3300014501	Permafrost	GKVDPQPLITRTFPLNEAPKAIKFAQEPGVMKVLLKADC*
Ga0167650_11277522	3300015203	Glacier Forefield Soil	AIALLRSQKVDPTLLITRVFPLRDAAKAIRYAQNSGVMKVLLRT*
Ga0182035_113460762	3300016341	Soil	TLLRSGKVDPTPLITRTFAMREAPQAIRYAQQPNVMKVLLRNEERTTKAG
Ga0182037_100741211	3300016404	Soil	RAKLIDPRPLITRTFSLSDASKAVEFAQRKGVLKVLLKP
Ga0187821_100673511	3300017936	Freshwater Sediment	LLRSGKVDPAPLITRRFSMKEAPAAIRFAQEPGVMKVLLNA
Ga0187882_12340371	3300018021	Peatland	LLRSGKVDPTPLISRTFALKAAPQAIAYAQKRGVMKVLLAAASPS
Ga0187869_101762541	3300018030	Peatland	KAITLLRSGKVDPTPLISRTFALKAAPQAIAYAQKRGVMKVLLTTSSPS
Ga0187769_104362013	3300018086	Tropical Peatland	RSGNVDPTPLISRTFALKDAPQAIAFAQRPSVLKVLLKT
Ga0066662_114825252	3300018468	Grasslands Soil	GAVDLKPLITRTFALKEAQKAMAFAESSGVLKVLLKP
Ga0210407_103628331	3300020579	Soil	LRAKLIDPRTLVTRTFPLSEASKAIKFAQKKGVLKVLLKP
Ga0210407_106575622	3300020579	Soil	VDPRTLVTRTFPLSEASKAIKFAQKKGVLKVLLKP
Ga0210407_112397371	3300020579	Soil	TPLITRTFSLRDAQRAIDFAQRPGVMKVLLHSPSEPL
Ga0210403_100878671	3300020580	Soil	LHSEEVDPRALVTHTFPMNEAPKAIRFAQKPGVMKVLLKA
Ga0210403_108742871	3300020580	Soil	AKAIALLRSGKVDPTPLITRMFPLAEAPAAIEFAQEANVMKVLLKAGPGKRSGAS
Ga0210399_113421882	3300020581	Soil	FAKSIALLRNGKVDPAPLVTRTFPLAEAAKAIEFAQQRDVMKVLLKP
Ga0210401_106229781	3300020583	Soil	GPFARALALLHSEEVDPRALVTHTFPMNEAPKAIRFAQKPGVMKVLLKA
Ga0210404_104668361	3300021088	Soil	KVNPTPLISRVVPLKDAPKAIIYAQKPGVMKVLLKS
Ga0210406_101436841	3300021168	Soil	AKLVDPRTLVTRTFPLSEASKAIKFAQKKGVLKVLLKP
Ga0210400_100613465	3300021170	Soil	SGEVDPTPLITRTFPLDQAPAAIQFARRAGIMKVLLQP
Ga0210405_102502861	3300021171	Soil	AIALLRSGKVDPTALISRAFALKNAPVAIVHAQKRGVMKVLLKA
Ga0210396_104504883	3300021180	Soil	LLPAGKVDPTPLISRTFELRDAPAAIKHAQKPGVMKVLLRNS
Ga0210396_111138411	3300021180	Soil	ALLRSGKVDPTPLISRTFALKDAPAAIKHAQKRGVMKVLLKA
Ga0210393_101454983	3300021401	Soil	VGPASLITRTFPMSEAAAAIRFAQKPGVMKILLKA
Ga0210393_103501571	3300021401	Soil	LLRSGKLDPTPLIARTFKMDEAPAAIRFAQKPGVMKVLLKAD
Ga0210387_106082702	3300021405	Soil	LLRAKKVDPRPLIARTYPLAEATAAMKFAQERGVLKVLLKP
Ga0210387_107085351	3300021405	Soil	AKLVDPRPLITRTFPLSEASKAMKFAQHDGVLKVLLKS
Ga0210383_109536772	3300021407	Soil	RSGKVVPAPLITKTFPMSEAPAAIRFAQKPGVMKVLLKA
Ga0210391_102366403	3300021433	Soil	LTLLRTGKIDPRQLISHTFPLAEAKEAMKFAQQRGVLKVLLKP
Ga0210391_114915652	3300021433	Soil	AKLVDPRPLITRTFPLSEASKAMKFAQKKGILKVLLKP
Ga0210390_101432791	3300021474	Soil	LRTGRVDPTPLISRVFPLQDAAAAIHYAQQRGVMKVLLKVEVRV
Ga0210390_115405501	3300021474	Soil	ALLRSGKVDPTPLISRTFSMKDAPTAILYAQQPNVMKVLLKKTDGATND
Ga0210392_109326152	3300021475	Soil	GPFAKAIGLLRSGKVDPTLLVSRTFALKNAPAAITYAQKHGVMKVLLKNA
Ga0210402_108199331	3300021478	Soil	GKLDPKPLIARTFKMDEAPAAIRFAQKPGVMKVLLKAC
Ga0210410_105161642	3300021479	Soil	AIAMLRSGKVDPTPLISRVFELKDAPAAIAHAQKRGVMKVLLRNT
Ga0247676_10731612	3300024249	Soil	IALLRTGKVDPTPLISRVFALKDAPAAIAFAQRRGVMKVLLKP
Ga0208076_10674212	3300025464	Arctic Peat Soil	DPRPLITRTFPLAQAPAAIQYAQRPGVVKVLLTPK
Ga0207646_107149532	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LLRAGKVDPRSLVTRTFPLQEAPAAIAFAQKPAVMKVLLKSEYKSLKA
Ga0207665_104168731	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RKIDPTLLITRGFPLAQAPSAMLFAQKRGVMKVLLRNEN
Ga0209131_11818531	3300026320	Grasslands Soil	IDPTPLITRTFPLLDAPAAIAFAQKSGVMKVVLKA
Ga0209802_12684992	3300026328	Soil	ANAIGLLRSCKIDPTPLITRKFALAEAPTAIRFAQRPGVMKVLLSS
Ga0209058_13296582	3300026536	Soil	ALLRAGKVDPRSLVTRTFPLQEAPAAIAFAQKPAVMKVLLKSEYKSLKA
Ga0209157_13754621	3300026537	Soil	ALLRSRKVDPRPLITRRFPLAEAPTAIRFAQQSGVMKVLLKS
Ga0179587_106184891	3300026557	Vadose Zone Soil	PRPLIARTFPLHEASAAIVFAQKSGVMKVLLKKEG
Ga0207766_10280632	3300027042	Tropical Forest Soil	LLRSGKIEPTALISRTFALKDAPKAIDYAQQSGVLKVLLKANSTL
Ga0208365_10251832	3300027070	Forest Soil	RKGIALLRSGKVDPRPLVTRVFPLAEADKAIQFAKKKGVMKVLLKA
Ga0208097_10066301	3300027173	Forest Soil	GKIDPTPLITHTFPLAEAAKAIDLAQRPGVMKVLLKPETERN
Ga0209116_10130881	3300027590	Forest Soil	VDPRPLITRTFPLSEAPAAMAYAQEKDAMKVLLKP
Ga0209177_101440343	3300027775	Agricultural Soil	QSGKLDLAPLITRTFPLSQAADAIQFAQRRGVMKVLLRN
Ga0209448_101991492	3300027783	Bog Forest Soil	PLISRVFPLKNAAKAIRYAQQPGVMKVLIKITPDEN
Ga0209166_100220425	3300027857	Surface Soil	AIALLHTLKVDPRPLITQAFPLKDASTAIAFAQESGVMKVLLTAD
Ga0209167_100596074	3300027867	Surface Soil	GKVDPRPLITRTFSLAETSAAIRFAQQPGVMKVLLKNV
Ga0209167_104710653	3300027867	Surface Soil	AIALLHTLKVDPRPLITQAFPLKDASTAIAFAQESGVMKVLLKANAQA
Ga0209283_100735214	3300027875	Vadose Zone Soil	LRSGKIDPTPLITRTFPLAEAEKAIRFAQQNGVMKVLLKA
Ga0209169_102724852	3300027879	Soil	KLDPSPLITRTFPLAEAAAAMAYAQEKDVMKVLLKP
Ga0209488_106626811	3300027903	Vadose Zone Soil	TFLRSGKIDLTPLITRTFTLSDAPAAIHFAQWRDAMKVLLKPDSGTE
Ga0222749_101688803	3300029636	Soil	EEVDPRALVTHTFPMNEAPKAIRFAQKPGVMKVLLKA
Ga0307482_11825232	3300030730	Hardwood Forest Soil	RSGKVDPTPLISRTFVLHDADAAIARAQKRGVMKVLLRNT
Ga0075377_115506863	3300030844	Soil	AIALLRSGKVDPTPLITRVFPLKDAPKDIVYAQKPGVMKVLLKS
Ga0170824_1043249911	3300031231	Forest Soil	REPKVDPRPLITRTFPLDEAPAAIAYAQEKNVMKVLLKP
Ga0310686_1185423885	3300031708	Soil	RSGRVDPRPLITRIFPLKDAAKAIRHAQERGVMKVLLKPAHQRE
Ga0307477_101970283	3300031753	Hardwood Forest Soil	KVDPRPLITRTFPLEEASAAVALAQKSGVMKVLLKNAAK
Ga0318521_108664372	3300031770	Soil	LRSGTIEPTALISRTFALKDAPKAIDYAQQSGVLKVLLKANSTL
Ga0318546_101979483	3300031771	Soil	ELLRSGKVDPRVLISRTFSLNDAAKALAYAQKRGVLKVLLKANQRSL
Ga0318523_105528592	3300031798	Soil	FEKAIALLQAGKVDPRPLITRSFSLGEAAAAVRFAQRRGVMKVLLRA
Ga0310909_102771013	3300031947	Soil	LRAKLIDPRPLITRTFSLSDASKAVEFAQRKGVLKVLLKP
Ga0307479_121233691	3300031962	Hardwood Forest Soil	AIALLTSGKIDPASLITRTFPLSDAPAAIRFAQKSGVMKVLLKSK
Ga0318575_101398293	3300032055	Soil	VELLRSGKVDPRVLISRTFSLNDAAKALAYAQKRGVLKVLLKANQRSL
Ga0318504_100504751	3300032063	Soil	VELLRSGKVDPKLLISRTFSLSDAAKALAYAQKRGVLKVLLKANQRSL
Ga0335069_100056701	3300032893	Soil	SDKVDPTPLISRTFSLADVPKAITYAQQPGVMKVILSNS
Ga0335069_113917291	3300032893	Soil	IELLRSGKVDPTPLISRTFSLEEAPEAVRYAQVRGVLKVLLKNEAR
Ga0335069_119885311	3300032893	Soil	DPSPLITKIFPLAKAAKAIEFAQKSGVMKVLLENRNEKI
Ga0335073_100010831	3300033134	Soil	KAIALLRSGRVDATPLITRTFPLAEAPQAIQFAQKPGVMKVLLKTDMKG
Ga0371488_0257527_731_850	3300033983	Peat Soil	DPTPLISRTFALKDAPQAIAYAQQSGVLKVLLAASSSVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences