Metagenome / Metatranscriptome Family F061195

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061195
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	58 residues
Representative Sequence	LARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPQAPRRAVAMPQPLAAG
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	94.70 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (30.303 % of family members)
Environment Ontology (ENVO)	Unclassified (75.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.788 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.29% β-sheet: 0.00% Coil/Unstructured: 84.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01740	STAS	7.58
PF14361	RsbRD_N	5.30
PF13581	HATPase_c_2	2.27
PF10531	SLBB	0.76
PF13424	TPR_12	0.76
PF01035	DNA_binding_1	0.76
PF00440	TetR_N	0.76
PF13522	GATase_6	0.76
PF01186	Lysyl_oxidase	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.76
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	56.82 %
Unclassified	root	N/A	15.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.27 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	56.82 %
Unclassified	root	N/A	15.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.27 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	53.79 %
Unclassified	root	N/A	15.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	53.79 %
Unclassified	root	N/A	15.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.52 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	53.79 %
Unclassified	root	N/A	15.91 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	1.52 %
delta proteobacterium NaphS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	53.79 %
Unclassified	root	N/A	15.91 %
Desulfuromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas	0.76 %
Pelobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter	0.76 %
delta proteobacterium NaphS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	53.79 %
Unclassified	root	N/A	15.91 %
Pelobacter propionicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter → Pelobacter propionicus	0.76 %
Desulfuromonas acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → Desulfuromonas acetoxidans	0.76 %
delta proteobacterium NaphS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1009879	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300002560\|JGI25383J37093_10082068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300002912\|JGI25386J43895_10194863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter → Pelobacter propionicus	508	Open in IMG/M
3300002915\|JGI25387J43893_1008312	Not Available	1400	Open in IMG/M
3300005172\|Ga0066683_10837694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300005174\|Ga0066680_10110259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1693	Open in IMG/M
3300005175\|Ga0066673_10072922	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300005175\|Ga0066673_10627497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → Desulfuromonas acetoxidans	623	Open in IMG/M
3300005178\|Ga0066688_10755099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300005180\|Ga0066685_10169967	Not Available	1488	Open in IMG/M
3300005180\|Ga0066685_11035018	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005181\|Ga0066678_10709863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300005186\|Ga0066676_11020741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300005187\|Ga0066675_10363894	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005446\|Ga0066686_10960138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300005447\|Ga0066689_10437602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300005451\|Ga0066681_10284354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1009	Open in IMG/M
3300005467\|Ga0070706_101278048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300005540\|Ga0066697_10089729	Not Available	1782	Open in IMG/M
3300005540\|Ga0066697_10113146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1587	Open in IMG/M
3300005540\|Ga0066697_10732455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300005552\|Ga0066701_10046515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2360	Open in IMG/M
3300005557\|Ga0066704_10447739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	853	Open in IMG/M
3300005557\|Ga0066704_11001993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300005560\|Ga0066670_10171584	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005566\|Ga0066693_10028570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1746	Open in IMG/M
3300005569\|Ga0066705_10003160	All Organisms → cellular organisms → Bacteria	6625	Open in IMG/M
3300005574\|Ga0066694_10078449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300005575\|Ga0066702_10423484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → delta proteobacterium NaphS2	814	Open in IMG/M
3300005576\|Ga0066708_10218594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1201	Open in IMG/M
3300006173\|Ga0070716_100881567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300006796\|Ga0066665_10377911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1164	Open in IMG/M
3300006797\|Ga0066659_11105120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	663	Open in IMG/M
3300006800\|Ga0066660_11577191	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006854\|Ga0075425_101242801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M
3300009012\|Ga0066710_102739421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	701	Open in IMG/M
3300009012\|Ga0066710_104041145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300009012\|Ga0066710_104922810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300009137\|Ga0066709_103690710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300009137\|Ga0066709_104639280	Not Available	502	Open in IMG/M
3300009162\|Ga0075423_12352486	Not Available	580	Open in IMG/M
3300010122\|Ga0127488_1010010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300010126\|Ga0127482_1150620	Not Available	538	Open in IMG/M
3300010301\|Ga0134070_10049065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1422	Open in IMG/M
3300010303\|Ga0134082_10001121	All Organisms → cellular organisms → Bacteria	9456	Open in IMG/M
3300010303\|Ga0134082_10236090	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300010321\|Ga0134067_10113240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	939	Open in IMG/M
3300010321\|Ga0134067_10475584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300010323\|Ga0134086_10210573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	729	Open in IMG/M
3300010325\|Ga0134064_10020600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1863	Open in IMG/M
3300010326\|Ga0134065_10371047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300010326\|Ga0134065_10459014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300010335\|Ga0134063_10162434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1040	Open in IMG/M
3300010335\|Ga0134063_10566394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300010337\|Ga0134062_10036174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1966	Open in IMG/M
3300010337\|Ga0134062_10287578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300010905\|Ga0138112_1139947	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300011271\|Ga0137393_11452797	Not Available	575	Open in IMG/M
3300012198\|Ga0137364_10806941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	709	Open in IMG/M
3300012208\|Ga0137376_10303297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1386	Open in IMG/M
3300012208\|Ga0137376_10697729	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012208\|Ga0137376_11699857	Not Available	522	Open in IMG/M
3300012211\|Ga0137377_11729701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300012224\|Ga0134028_1007871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300012285\|Ga0137370_10121846	Not Available	1487	Open in IMG/M
3300012349\|Ga0137387_10157009	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300012351\|Ga0137386_11005313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M
3300012353\|Ga0137367_10746465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	680	Open in IMG/M
3300012359\|Ga0137385_11321748	Not Available	584	Open in IMG/M
3300012380\|Ga0134047_1154927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	691	Open in IMG/M
3300012397\|Ga0134056_1344454	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012400\|Ga0134048_1256530	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012400\|Ga0134048_1258472	Not Available	534	Open in IMG/M
3300012404\|Ga0134024_1332451	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300012407\|Ga0134050_1209101	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012409\|Ga0134045_1135165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1549	Open in IMG/M
3300012923\|Ga0137359_11119363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300012927\|Ga0137416_10683729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	900	Open in IMG/M
3300012972\|Ga0134077_10443009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300012975\|Ga0134110_10007786	All Organisms → cellular organisms → Bacteria	4016	Open in IMG/M
3300012975\|Ga0134110_10026104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2271	Open in IMG/M
3300012976\|Ga0134076_10368742	Not Available	634	Open in IMG/M
3300012976\|Ga0134076_10464189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300014150\|Ga0134081_10275969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300014157\|Ga0134078_10414192	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300015054\|Ga0137420_1144510	Not Available	1016	Open in IMG/M
3300015356\|Ga0134073_10155684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300015359\|Ga0134085_10364749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300017656\|Ga0134112_10406215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300017659\|Ga0134083_10337495	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	646	Open in IMG/M
3300018431\|Ga0066655_11051747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300018431\|Ga0066655_11317126	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018433\|Ga0066667_10002445	All Organisms → cellular organisms → Bacteria	7400	Open in IMG/M
3300018433\|Ga0066667_10018256	All Organisms → cellular organisms → Bacteria	3647	Open in IMG/M
3300018433\|Ga0066667_12257659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300018468\|Ga0066662_10556382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1062	Open in IMG/M
3300018468\|Ga0066662_11285720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300018482\|Ga0066669_10351754	Not Available	1224	Open in IMG/M
3300020022\|Ga0193733_1012678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2375	Open in IMG/M
3300020170\|Ga0179594_10047103	Not Available	1444	Open in IMG/M
3300021086\|Ga0179596_10002175	All Organisms → cellular organisms → Bacteria	5352	Open in IMG/M
3300025910\|Ga0207684_10049592	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300025922\|Ga0207646_11137296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300025922\|Ga0207646_11209909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300026296\|Ga0209235_1051302	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300026297\|Ga0209237_1032374	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300026297\|Ga0209237_1260565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300026298\|Ga0209236_1095292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1349	Open in IMG/M
3300026300\|Ga0209027_1057892	Not Available	1448	Open in IMG/M
3300026307\|Ga0209469_1060009	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300026309\|Ga0209055_1086323	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300026313\|Ga0209761_1257068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	665	Open in IMG/M
3300026316\|Ga0209155_1011123	All Organisms → cellular organisms → Bacteria	3920	Open in IMG/M
3300026318\|Ga0209471_1022420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3167	Open in IMG/M
3300026335\|Ga0209804_1191657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	868	Open in IMG/M
3300026523\|Ga0209808_1150184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	898	Open in IMG/M
3300026529\|Ga0209806_1053758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1879	Open in IMG/M
3300026529\|Ga0209806_1054219	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300026530\|Ga0209807_1256029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300026532\|Ga0209160_1211796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300026536\|Ga0209058_1188517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300026547\|Ga0209156_10278289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	763	Open in IMG/M
3300026548\|Ga0209161_10175939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1214	Open in IMG/M
3300027643\|Ga0209076_1086341	Not Available	892	Open in IMG/M
3300027681\|Ga0208991_1173382	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027748\|Ga0209689_1103155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1467	Open in IMG/M
3300027882\|Ga0209590_10365793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	930	Open in IMG/M
3300032180\|Ga0307471_103714445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.73%
Host-Associated	Host-Associated	2.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.73%
Plants	Host-Associated → Plants	2.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.91%
Loam	Environmental → Terrestrial → Soil → Loam	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	30.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	28.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10098791	3300002557	Grasslands Soil	ILTAAERALARRSPARPVIERWDGRAAERIARVVCDDERFELDTPLAARPPHSPRRAVAIPQPLGAG*
JGI25383J37093_100820681	3300002560	Grasslands Soil	AERIARVVCDDECFDLNEGTALPQTPRRAVAIPQPLAAG*
JGI25386J43895_101948631	3300002912	Grasslands Soil	AAERALARRSPARPVIERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPHPLGTG*
JGI25387J43893_10083121	3300002915	Grasslands Soil	RSPARPVIERWDGRAAERIARVVCDDERFELDTPLAARPPHSPRRAVAIPQPLGAG*
Ga0066683_108376942	3300005172	Soil	RPVIERWDGQAAERIARVVCEGERFELDGAVAAPSHAARRAVAIPQPLGAG*
Ga0066680_101102593	3300005174	Soil	VIERWDGQAAERIARVVCEGERFELDGAVAAPSHAARRAVAIPQPLGAG*
Ga0066673_100729221	3300005175	Soil	ARPVIERWDGQAAERIARVVCEGERFELDGAVAAPSHAARRAVAIPQPLGAG*
Ga0066673_106274971	3300005175	Soil	RDAVLAAAERALARRSPARPVIERWDGRAAERIARVVCEGERFELDAPPAAALPHAPRRAVAIPQPLGAG*
Ga0066688_107550991	3300005178	Soil	LIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0066685_101699671	3300005180	Soil	ARPVIERWDGRAAERIARVVCENERFELDSPLAAGLPHAPRRAVAIPQPLGAG*
Ga0066685_110350181	3300005180	Soil	LIERWDGHAAERIVRVVCDDECFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0066678_107098631	3300005181	Soil	PARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0066676_110207411	3300005186	Soil	FAAAERALAQRSPARPVIERWDGRAAERIARVLCDDEPFELDVPLAATSPHTPRRAVAIPQPFGAG*
Ga0066675_103638944	3300005187	Soil	LGAVERAVARRSPARPLIERWDGHAAERIVRVLCDGELDAAAPLPHPPRRARALPQPLAAS*
Ga0066686_109601382	3300005446	Soil	RSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0066689_104376021	3300005447	Soil	CTHGTNRLVLPRGDSVLAAAERALGRRSPARPVIERWDGKAAERIVAVVCDDARFDVDGAAASPPQVARRAAAIPVPLGAS*
Ga0066681_102843542	3300005451	Soil	LAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0070706_1012780482	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RAAILAAAERGLSRRSPARPVIERWDGHAAERIARVVCDGERFELDGASAERLMPRRAVAIPQPLGAG*
Ga0066697_100897294	3300005540	Soil	VIERWDGRAAERIARVVCENERFELDSPLAAGLPHAPRRAVAIPQPLGAG*
Ga0066697_101131461	3300005540	Soil	ARRSPARPLIERWDGHAAERIARVVCDDACFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0066697_107324552	3300005540	Soil	ARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0066701_100465151	3300005552	Soil	ERAVARRSPARPLIERWDGHAAERIVRVLCDGELDAAAPLPHPPRRARALPQPLAAS*
Ga0066704_104477392	3300005557	Soil	GTNRLVLPRGDSVLAAAERALGRRSPARPVIERWDGKAAERIVAVVCDDARFDVDGAAASPPQVARRAAAIPVPLGAS*
Ga0066704_110019932	3300005557	Soil	AAAERALARRSPARPLIERWDGHAAERIARVVCDDESFDLNEGTALPQAPRRAVAMPQPLGAG*
Ga0066670_101715841	3300005560	Soil	AILAAAERALGRRSPARPVIERWDGQAAARIAQVVCDGERFELDGALAAPAHAPRRAVAIPQPLGAS*
Ga0066693_100285703	3300005566	Soil	ARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0066705_1000316010	3300005569	Soil	ARRSPARPVIERWDGRAAERIARVVCENERFELDSPLAAGLPHAPRRAVAIPQPLGAG*
Ga0066705_108932191	3300005569	Soil	IERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPQPFGAG*
Ga0066694_100784493	3300005574	Soil	LGAVERAVARRSPARPVIERWDGHAAERIVRVLCEGELDAAAPPPHAPRRARVLPQPLAAG*
Ga0066702_104234841	3300005575	Soil	ILAAAEHALARRSPARPVIERWDGRAAERIARVVCEDERFELDAPLAATPPHASRRAVAIPQPLGAD*
Ga0066708_102185942	3300005576	Soil	PARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0070716_1008815671	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VAAAERALARRSPARPVIERWDGKAAERIARVVCDGEQFALDGGPAAQPQREPRRAVAIPQPLAS*
Ga0066665_103779113	3300006796	Soil	HSPARPVIERWDGQAAERIARVVCDGEGFELDGAVAAPAHAPRRAVAIPQPLGAG*
Ga0066659_111051202	3300006797	Soil	RSPARPIIERWDGRAAERIAQVVCDGERFELDAPDAASRTPRHAVAIPQPLGAG*
Ga0066660_115771912	3300006800	Soil	WAVARRSPARPLIERWDGHAAERIVRVLCDGELDGAASPPHPPRRARAMPQPLAAG*
Ga0075425_1012428011	3300006854	Populus Rhizosphere	AERIARVVCDDECFDPNEGTALPQAPRRAVAIPQPLAAG*
Ga0075436_1000616401	3300006914	Populus Rhizosphere	ERWDGRAAERIARVVCDDERFEVDAPQAATPARTPRRAVAIPQPLGAG*
Ga0066710_1027394212	3300009012	Grasslands Soil	GLARRSPARPVIERWDGRAAERIARVVCDGERFELDGGVAAQPHEPRRAVAIPQPLGAE
Ga0066710_1040411451	3300009012	Grasslands Soil	ARPVIERWDGRAAERIARVVCDGERFELDGGVAARPHEPRRAVAIPQPLGAE
Ga0066710_1049228101	3300009012	Grasslands Soil	LARHSPARPVIERWDGQAAERIARVVCEGERFELDGAVAAPSHAARRAVAIPQPLGAG
Ga0066709_1036907101	3300009137	Grasslands Soil	RSPARPVIERWDGRAAERIARVVCDGERFELDGGVAAQPHEPRRAVAIPQPLGAE*
Ga0066709_1046392802	3300009137	Grasslands Soil	RSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPASRRAVAMPQPLAAG*
Ga0075423_123524862	3300009162	Populus Rhizosphere	WDGHAAERIARVVCDDECFDPNEGTALPQAPRRAVAMPQPLAAG*
Ga0127488_10100102	3300010122	Grasslands Soil	LARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0127482_11506201	3300010126	Grasslands Soil	RSPARPLIERWDGHAAERIARVVCDEECFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0134070_100490653	3300010301	Grasslands Soil	SPARPLIERWDGHAAERIARVVCDEECFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0134082_100011217	3300010303	Grasslands Soil	MLNAVDRAVARRSPARPVIERWDGRAAERIVRVLCDGELVDLDSTAAAPPHLPRRAVALPQPLAAS*
Ga0134082_102360901	3300010303	Grasslands Soil	LLGAVERAVARRSPARPLIERWDGHAAERIVRVLCEGELDAAAPPPHAPRRARALPQPLAAG*
Ga0134067_101132401	3300010321	Grasslands Soil	LPKRDAILAGAERALAQRSPARPVIERWDGRAAERIARVVCADERFDVDGPLAATPPHAPRRAIAIPQPLGAG*
Ga0134067_104755841	3300010321	Grasslands Soil	PKRDAVLAAAERALARRSPARPVIERWDGRAAERIARVVCEDERFELDAPPAAALPHAPRRAVAIPQPLGAG*
Ga0134086_102105731	3300010323	Grasslands Soil	ILAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134064_100206001	3300010325	Grasslands Soil	WDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134065_103710471	3300010326	Grasslands Soil	AAERALARRSPARPVIERWDGRAAERIARVVCDDERFELDSPLAAGLPHAPRRAVAIPQPFGAG*
Ga0134065_104590141	3300010326	Grasslands Soil	RWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134063_101624341	3300010335	Grasslands Soil	RALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0134063_105663941	3300010335	Grasslands Soil	RALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134062_100361743	3300010337	Grasslands Soil	RAVARRSPARPVIERWDGRAAERIVRVLCDGELVDLDSTAAAPPHLPRRAVALPQPLAAT
Ga0134062_102875781	3300010337	Grasslands Soil	ERALAQRSPARPVIERWDGRAAERIARVVCADERFDVDGPLAATPPHAPRRAIAIPQPLGAG*
Ga0138112_11399471	3300010905	Grasslands Soil	LNAVERAVARRSPARPVIERWDGRAAERIVRVLCDGELVDLDGTAAAPPRPPRRAVAMPQPLAAS*
Ga0137393_114527971	3300011271	Vadose Zone Soil	RIARVVCDDECFDPNEGTALPQAPRRAVAMPQPLAAG*
Ga0137364_108069412	3300012198	Vadose Zone Soil	GAILAAAERALARRSPARPLIERWDGHAADRIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0137376_103032971	3300012208	Vadose Zone Soil	LARRSPARPLIERWDGHAAERIARVVCEDECFDLNEGTALPQAPRRAVAMPQPLGAG*
Ga0137376_106977291	3300012208	Vadose Zone Soil	QPRRDAIVAAAERGLRRRSPARPIIERWDGRAAERIAQVVCDGERFELDAPDAASRTPRHAVAIPQPLGAG*
Ga0137376_116998571	3300012208	Vadose Zone Soil	ARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPASRRAVAMPQPLAAG*
Ga0137377_117297011	3300012211	Vadose Zone Soil	AILAAAERGLARHSPARPVIERWDGQAAERIARVVCDGEGFELDGAVAAPAHAPRRAVAIPQPLGAG*
Ga0134028_10078711	3300012224	Grasslands Soil	GHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0134028_11964811	3300012224	Grasslands Soil	ERWDGRAAERIARVVCDGERFELDGGVAAQPHEPRRAVAIPQPLGAE*
Ga0137370_101218461	3300012285	Vadose Zone Soil	TNRLVLPKRDAILAAAERALARRSPARPVLERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPQPLGAG*
Ga0137387_101570093	3300012349	Vadose Zone Soil	DAILTAAERALARRSPARPVIERWDGQAAERIARVVCDGESFELDGAVAAPAHAPRRAVAIPQPLGAA*
Ga0137386_110053131	3300012351	Vadose Zone Soil	LIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0137367_107464652	3300012353	Vadose Zone Soil	WDGRAAERIVRVVCDEECFPLDEETTPRVARRAVAIPHPLAAG*
Ga0137385_113217481	3300012359	Vadose Zone Soil	ERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134047_11549271	3300012380	Grasslands Soil	VLPQRGVILAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134044_10475832	3300012395	Grasslands Soil	ERWDGQAAERIARVVCDGERFELDSGATAPAREPRRAVAIPQPLGAG*
Ga0134056_13444541	3300012397	Grasslands Soil	RAVPRRSPARPVIERWDGRAAERIVRVLCDGELVDLDSTAAAPPHLPRRAVALPQPLAAS
Ga0134048_12565301	3300012400	Grasslands Soil	RAVARRSPARPLIERWDGHAAERIVRVLCDGELDAAAPLPHAPRRARALPQPLAAS*
Ga0134048_12584721	3300012400	Grasslands Soil	GHAAERIARVVCDDACFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0134024_13324513	3300012404	Grasslands Soil	GLARRSPARPVIERWDGRAAERIARVVCDGERFELDGGVAAQPHEPRRAVAIPQPLGAE*
Ga0134050_12091011	3300012407	Grasslands Soil	RAVACRSPARPLIERWDGHAAERIVRVLCDGELDAAEALPHPPRRARAVPRPLVAS*
Ga0134045_11351651	3300012409	Grasslands Soil	ARPLIERWDGRAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0137359_111193632	3300012923	Vadose Zone Soil	QAQRDAILAAAERGLARHSPARPVIERWDGRAAERIARVVCEGERFELDGAVAAPAHAARRAVAIPQPLGAG*
Ga0137416_106837291	3300012927	Vadose Zone Soil	HGTNRLVQAQCDPILAAAERALARRSPARPLIERWDGKAAERIARVVCDGERFALDGGPAAQPQREPRRAVAIPQPLAS*
Ga0134077_104430091	3300012972	Grasslands Soil	IERWDGRAAERIARVVSDGERFELDGGAAVQPREPRRAVAIPQPLGAS*
Ga0134110_100077861	3300012975	Grasslands Soil	PLIERWDGHAAERIVRVVCDDECFDPNEGTALPPAPRRAVAMPQPLAAG*
Ga0134110_100261041	3300012975	Grasslands Soil	PLIERWDGHAAERIVRVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG*
Ga0134076_103687421	3300012976	Grasslands Soil	PLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG*
Ga0134076_104641891	3300012976	Grasslands Soil	LVLAKRDAILAAAERALARRSPARPVIERWDGRAAERIARVVCDDERFELDAPLAAMSPHIPRRAVAIPQPLGAG*
Ga0134081_102759691	3300014150	Grasslands Soil	RGLARRSPARPVLERWDGQAAQRIAQVVCDGERFELDGGTATPPREARRAVGIPQPLGAA
Ga0134078_104141921	3300014157	Grasslands Soil	AQRDAILAAAERGLARGSPARPVIERWDGRAAERIARVVCDGERFELDGGVAAQPHEPRRAVAIPQPLGAE*
Ga0137420_11445101	3300015054	Vadose Zone Soil	SPAALARRSPARPVIERWDGKAAERIARVACDGERYGLDGGPAAQLQREPRRAVAIPQPLAS*
Ga0134073_101556842	3300015356	Grasslands Soil	DAILAAAERGLARRSPARPVLERWDGQAAQRIAQVVCDGERFELDGGTATPPREARRAVAIPQPLGAA*
Ga0134085_103647492	3300015359	Grasslands Soil	WDGHAAERIARVVCDDECFDLNEGTALPQAPRRAVAIPQPLGAG*
Ga0134112_104062151	3300017656	Grasslands Soil	LARRSPARPVIERWDGQAAERIAQVVCDGERFELDGAVAAPAHALRRAVAIPQPLGAG
Ga0134083_103374952	3300017659	Grasslands Soil	AAERALARRSPARPLIERWDGHAAERIARVVCDDACFDPNEGTALPPAPRRAVAMPQPLAAG
Ga0066655_110517471	3300018431	Grasslands Soil	ARRSPARPLIERWDGHAAERIARVVCDDACFDPNEGTALPPAPRRAVAMPQPLAAG
Ga0066655_113171261	3300018431	Grasslands Soil	SPARPVIERWDGRAAERIVRVLCDGELVDLDSTAAAPPHLPRRAVALPQPLAAS
Ga0066667_1000244510	3300018433	Grasslands Soil	ERGLARRSPARPVIERWDGRAAERIARVVCDGERFELDGGVAARPHEPRRAVAIPQPLGA
Ga0066667_100182561	3300018433	Grasslands Soil	AAAERGLARRSPARPVLERWDGQAAQRIAQVVCDGERFELDGGTATPPREARRAVAIPQPLGAA
Ga0066667_122576591	3300018433	Grasslands Soil	RALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG
Ga0066662_105563822	3300018468	Grasslands Soil	AERIARAVCDDECFDLNEGTALPQAPRRAVAMPQPLAAG
Ga0066662_112857202	3300018468	Grasslands Soil	RGAILAAAERALARRSPARPLIERWDGRAAERVARVVCDDECFDLDEGTALPQAPRRAVAIPQPLGAG
Ga0066669_103517542	3300018482	Grasslands Soil	SPARPVIERWDGRAAERIARVVCEDERFELDSPLAAGLPHAPRRAVAIPQPLGAV
Ga0193733_10126783	3300020022	Soil	MPRRDPVLAAAERALARRSPTRPVIERWDGQAAERIARVVCDNACFDVDGAAAPAPHVLRRAVAMPQPLRAG
Ga0179594_100471031	3300020170	Vadose Zone Soil	RSPARPVIERWDGKAAERIARVVCEGERFAPDGGPAAQPQREPRRAVAIPQPLAS
Ga0179596_100021751	3300021086	Vadose Zone Soil	AAERGLARHSPARPVIERWDGKAAERIARVVCDGERFGLDAGPAAQLQREPRRAVAIPQPLAS
Ga0207684_100495925	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPQAPRRAVAMPQPLAAG
Ga0207646_111372961	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ILAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPQAPRRAVAMPQPLAAG
Ga0207646_112099091	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RGAILAAAERALARRSPARPLIERWDGHAAERIVRVVCDDECFDPNEGTALPQAPRRAVAMPLPLAAG
Ga0209235_10513021	3300026296	Grasslands Soil	LARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPAARRAVAMPQPLAAG
Ga0209237_10323744	3300026297	Grasslands Soil	IERWDGHAAERIARVVCDDECFNPNEGTALPPAARRAVAMPQPLAAG
Ga0209237_12605651	3300026297	Grasslands Soil	DAILAAAERALARRSPARPVIERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPHPLGTG
Ga0209236_10952923	3300026298	Grasslands Soil	SPARPMIERWDGQAAERIARVVCDDECFDLNEGTALPQTPRRAVAIPQPLAAG
Ga0209027_10578922	3300026300	Grasslands Soil	PARPVIERWDGRAAERIARVVCEDERFELDTPLAAALPHAPRRAVAIPQPLGAG
Ga0209469_10600092	3300026307	Soil	NRLVQPQRDAILAAAERALGRRSPARPVIERWDGQAAARIAQVVCDGERFELDGALAAPAHAPRRAVAIPQPLGAS
Ga0209055_10863232	3300026309	Soil	RDAILAAAERALGRRSPARPVIERWDGQAAARIAQVVCDGERFELDGALAAPAHAPRRAVAIPQPLGAS
Ga0209761_12570681	3300026313	Grasslands Soil	HGTNRLLLPQCGAILAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTTLPPAPRRAVAMPQPLAAG
Ga0209155_10111236	3300026316	Soil	ARRSPARPVIERWDGRAAERIACVLCDDERFELDVPLAATSPHTPRRAVAIPQPFGAG
Ga0209471_10224201	3300026318	Soil	ERAMARRSPARPVIERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPQPLGAG
Ga0209804_11916573	3300026335	Soil	RSPARPVIERWDGRAAERIARVVCEGEHFELDSPLAAGLPHAPRRAVAIPQPFGAG
Ga0209808_11501841	3300026523	Soil	WDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG
Ga0209806_10537581	3300026529	Soil	LIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG
Ga0209806_10542193	3300026529	Soil	LIERWDGHAAERIARVVCDDECFDPNEGTALPPAARRAVAMPQPLAAG
Ga0209807_12560291	3300026530	Soil	SPARPVIERWDGRAAERIARVLCDDERFELDVPLAATSPHTPRRAVAIPQPLGAG
Ga0209160_12117962	3300026532	Soil	RGAILAAAERALARRSPARPLIERWDGHAAERIARVVCDDESFDLNEGTALPQAPRRAVAMPQPLGAG
Ga0209058_11885171	3300026536	Soil	NRLVLPQRGVILAAAERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTAVPQAPRRAVAMPQPLAAG
Ga0209156_102782892	3300026547	Soil	TNRLVQAQRDAILAAAERGLARRSPARPVLERWDGQAAQRIAQVVCDGERFELDGGTATPPREARRAVGIPQPLGAA
Ga0209161_101759392	3300026548	Soil	ERALARRSPARPLIERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG
Ga0209076_10863412	3300027643	Vadose Zone Soil	LARRSPARPVIERWDGKAAERIARVACDGERYGLDGGPAAQLQREPRRAVAIPQPLAS
Ga0208991_11733822	3300027681	Forest Soil	VRAQRDAILAAAERGLAQRSPARPVIERWDGQAAERIARVVCDGETFEFDGAAAERLMPRRAVAIPQPLGAG
Ga0209689_11031551	3300027748	Soil	IERWDGHAAERIARVVCDDECFDPNEGTALPPAPRRAVAMPQPLGAG
Ga0209590_103657932	3300027882	Vadose Zone Soil	PLIERWDGHAAERIARVVCEDECFDLNEGTALPQAPRRAVAMPQPLGAG
Ga0307471_1037144451	3300032180	Hardwood Forest Soil	ARPVIERWDGQAAERIARVVCDEERFDVDGAAAVPTGRRAVAIPQPLGAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061195

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences