NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F061174

Metagenome / Metatranscriptome Family F061174

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F061174
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 58 residues
Representative Sequence LISRSRIACAVLALATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT
Number of Associated Samples 112
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.48 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 91.67 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.727 % of family members)
Environment Ontology (ENVO) Unclassified
(27.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.727 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 35.29%    β-sheet: 0.00%    Coil/Unstructured: 64.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF00939Na_sulph_symp 19.70
PF03737RraA-like 3.03
PF00005ABC_tran 1.52
PF07586HXXSHH 1.52
PF13483Lactamase_B_3 0.76
PF12674Zn_ribbon_2 0.76
PF10518TAT_signal 0.76
PF13450NAD_binding_8 0.76
PF02548Pantoate_transf 0.76
PF04909Amidohydro_2 0.76
PF01250Ribosomal_S6 0.76
PF01436NHL 0.76
PF00270DEAD 0.76
PF07690MFS_1 0.76
PF13620CarboxypepD_reg 0.76
PF12796Ank_2 0.76
PF00654Voltage_CLC 0.76
PF00932LTD 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG0471Di- and tricarboxylate antiporterCarbohydrate transport and metabolism [G] 19.70
COG1055Na+/H+ antiporter NhaD or related arsenite permeaseInorganic ion transport and metabolism [P] 19.70
COG0684RNA degradosome component RraA (regulator of RNase E activity)Translation, ribosomal structure and biogenesis [J] 3.03
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 0.76
COG0360Ribosomal protein S6Translation, ribosomal structure and biogenesis [J] 0.76
COG0413Ketopantoate hydroxymethyltransferaseCoenzyme transport and metabolism [H] 0.76


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000178|FW301_c1004939All Organisms → cellular organisms → Bacteria → Acidobacteria1827Open in IMG/M
3300000550|F24TB_10060635All Organisms → cellular organisms → Bacteria → Acidobacteria1458Open in IMG/M
3300004633|Ga0066395_10134014All Organisms → cellular organisms → Bacteria → Acidobacteria1237Open in IMG/M
3300005172|Ga0066683_10085117All Organisms → cellular organisms → Bacteria → Acidobacteria1908Open in IMG/M
3300005172|Ga0066683_10704560All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300005174|Ga0066680_10833688All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300005175|Ga0066673_10086441All Organisms → cellular organisms → Bacteria → Acidobacteria1658Open in IMG/M
3300005176|Ga0066679_10223446All Organisms → cellular organisms → Bacteria → Acidobacteria1207Open in IMG/M
3300005179|Ga0066684_10584278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300005180|Ga0066685_10196305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1384Open in IMG/M
3300005180|Ga0066685_10320071All Organisms → cellular organisms → Bacteria → Acidobacteria1075Open in IMG/M
3300005434|Ga0070709_10269139All Organisms → cellular organisms → Bacteria → Acidobacteria1234Open in IMG/M
3300005445|Ga0070708_100211536All Organisms → cellular organisms → Bacteria → Acidobacteria1817Open in IMG/M
3300005450|Ga0066682_10584792All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300005451|Ga0066681_10091485All Organisms → cellular organisms → Bacteria → Acidobacteria1729Open in IMG/M
3300005471|Ga0070698_100565400All Organisms → cellular organisms → Bacteria → Acidobacteria1077Open in IMG/M
3300005545|Ga0070695_101126752All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300005554|Ga0066661_10618093All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300005556|Ga0066707_10110916All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1698Open in IMG/M
3300005556|Ga0066707_10242387All Organisms → cellular organisms → Bacteria → Acidobacteria1174Open in IMG/M
3300005557|Ga0066704_10710562All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300005559|Ga0066700_10395680All Organisms → cellular organisms → Bacteria → Acidobacteria974Open in IMG/M
3300005560|Ga0066670_10922353All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300005568|Ga0066703_10234296All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1116Open in IMG/M
3300005569|Ga0066705_10274402All Organisms → cellular organisms → Bacteria → Acidobacteria1070Open in IMG/M
3300005576|Ga0066708_10394022All Organisms → cellular organisms → Bacteria → Acidobacteria889Open in IMG/M
3300005578|Ga0068854_101537634All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300005617|Ga0068859_102135386All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300005713|Ga0066905_100119486All Organisms → cellular organisms → Bacteria → Acidobacteria1835Open in IMG/M
3300005764|Ga0066903_100007631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9839Open in IMG/M
3300005764|Ga0066903_100623950All Organisms → cellular organisms → Bacteria → Acidobacteria1876Open in IMG/M
3300005764|Ga0066903_101605682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1233Open in IMG/M
3300006031|Ga0066651_10835751All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300006046|Ga0066652_101993055All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300006173|Ga0070716_101634230All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300006791|Ga0066653_10255362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium893Open in IMG/M
3300006796|Ga0066665_11374661All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006852|Ga0075433_11736402All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300006854|Ga0075425_100000215All Organisms → cellular organisms → Bacteria52614Open in IMG/M
3300006854|Ga0075425_100247092All Organisms → cellular organisms → Bacteria → Acidobacteria2053Open in IMG/M
3300006854|Ga0075425_102259989All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300006903|Ga0075426_10784106All Organisms → cellular organisms → Bacteria → Acidobacteria716Open in IMG/M
3300006904|Ga0075424_100246027All Organisms → cellular organisms → Bacteria1901Open in IMG/M
3300007076|Ga0075435_100728995All Organisms → cellular organisms → Bacteria → Acidobacteria862Open in IMG/M
3300007255|Ga0099791_10486373All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300009012|Ga0066710_100175461All Organisms → cellular organisms → Bacteria → Acidobacteria3020Open in IMG/M
3300009012|Ga0066710_101247313All Organisms → cellular organisms → Bacteria → Acidobacteria1152Open in IMG/M
3300009012|Ga0066710_104087730All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300009012|Ga0066710_104862608All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300009038|Ga0099829_10345236All Organisms → cellular organisms → Bacteria → Acidobacteria1225Open in IMG/M
3300009038|Ga0099829_11067556All Organisms → cellular organisms → Bacteria → Acidobacteria669Open in IMG/M
3300009089|Ga0099828_11068510All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300009090|Ga0099827_11859221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300009137|Ga0066709_103141810All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300009143|Ga0099792_10620763All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300009147|Ga0114129_10517769All Organisms → cellular organisms → Bacteria → Acidobacteria1556Open in IMG/M
3300009162|Ga0075423_10693911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1074Open in IMG/M
3300009553|Ga0105249_12047284All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300010159|Ga0099796_10177325All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
3300010360|Ga0126372_12802546All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300010398|Ga0126383_11408311All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300010399|Ga0134127_11169828All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300010401|Ga0134121_13167642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300010403|Ga0134123_11988220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300012096|Ga0137389_10686654All Organisms → cellular organisms → Bacteria → Acidobacteria880Open in IMG/M
3300012096|Ga0137389_11255678All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300012189|Ga0137388_10338279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1386Open in IMG/M
3300012198|Ga0137364_11450661All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300012203|Ga0137399_10688639All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300012203|Ga0137399_11286723All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300012204|Ga0137374_10468447All Organisms → cellular organisms → Bacteria → Acidobacteria985Open in IMG/M
3300012205|Ga0137362_10731290All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium850Open in IMG/M
3300012205|Ga0137362_11487199All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300012285|Ga0137370_10523727All Organisms → cellular organisms → Bacteria → Acidobacteria727Open in IMG/M
3300012353|Ga0137367_10362713All Organisms → cellular organisms → Bacteria → Acidobacteria1030Open in IMG/M
3300012354|Ga0137366_11140474All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300012361|Ga0137360_10943048All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300012361|Ga0137360_11273084All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300012362|Ga0137361_10809132All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300012362|Ga0137361_11120993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300012362|Ga0137361_11139365All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300012363|Ga0137390_10301768All Organisms → cellular organisms → Bacteria → Acidobacteria1584Open in IMG/M
3300012363|Ga0137390_11969038All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300012917|Ga0137395_10853877All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300012918|Ga0137396_11000100All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300012923|Ga0137359_10975530All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300012925|Ga0137419_11055563All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300012948|Ga0126375_10452043All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300012971|Ga0126369_13438503All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300015371|Ga0132258_12595348All Organisms → cellular organisms → Bacteria → Acidobacteria1266Open in IMG/M
3300016341|Ga0182035_10035262All Organisms → cellular organisms → Bacteria → Acidobacteria3274Open in IMG/M
3300018000|Ga0184604_10113355All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300018027|Ga0184605_10291034All Organisms → cellular organisms → Bacteria → Acidobacteria740Open in IMG/M
3300018054|Ga0184621_10108347All Organisms → cellular organisms → Bacteria → Acidobacteria987Open in IMG/M
3300018061|Ga0184619_10379314All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300018071|Ga0184618_10198049All Organisms → cellular organisms → Bacteria → Acidobacteria839Open in IMG/M
3300018482|Ga0066669_10360879All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300020021|Ga0193726_1001461All Organisms → cellular organisms → Bacteria18532Open in IMG/M
3300021407|Ga0210383_10507762All Organisms → cellular organisms → Bacteria → Acidobacteria1041Open in IMG/M
3300021432|Ga0210384_10108819All Organisms → cellular organisms → Bacteria2485Open in IMG/M
3300022721|Ga0242666_1124359All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300025910|Ga0207684_11170093All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300025922|Ga0207646_10199493All Organisms → cellular organisms → Bacteria → Acidobacteria1807Open in IMG/M
3300025922|Ga0207646_10262519All Organisms → cellular organisms → Bacteria → Acidobacteria1561Open in IMG/M
3300025981|Ga0207640_11692109All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300026089|Ga0207648_10361389All Organisms → cellular organisms → Bacteria → Acidobacteria1310Open in IMG/M
3300026118|Ga0207675_102744949All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300026304|Ga0209240_1149528All Organisms → cellular organisms → Bacteria → Acidobacteria732Open in IMG/M
3300026316|Ga0209155_1064221All Organisms → cellular organisms → Bacteria1400Open in IMG/M
3300026343|Ga0209159_1096155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1298Open in IMG/M
3300026542|Ga0209805_1011180All Organisms → cellular organisms → Bacteria4828Open in IMG/M
3300026550|Ga0209474_10004547All Organisms → cellular organisms → Bacteria11958Open in IMG/M
3300027645|Ga0209117_1154512All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300027651|Ga0209217_1180190All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300027874|Ga0209465_10106606All Organisms → cellular organisms → Bacteria → Acidobacteria1376Open in IMG/M
3300028718|Ga0307307_10147028All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300028784|Ga0307282_10219525All Organisms → cellular organisms → Bacteria → Acidobacteria911Open in IMG/M
3300028811|Ga0307292_10223338All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300028884|Ga0307308_10090831All Organisms → cellular organisms → Bacteria → Acidobacteria1451Open in IMG/M
3300029636|Ga0222749_10072074All Organisms → cellular organisms → Bacteria → Acidobacteria1570Open in IMG/M
3300031545|Ga0318541_10484626All Organisms → cellular organisms → Bacteria → Acidobacteria692Open in IMG/M
3300031561|Ga0318528_10252305All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300031561|Ga0318528_10298344All Organisms → cellular organisms → Bacteria → Acidobacteria865Open in IMG/M
3300031910|Ga0306923_10083894All Organisms → cellular organisms → Bacteria3574Open in IMG/M
3300031912|Ga0306921_11056710All Organisms → cellular organisms → Bacteria → Acidobacteria913Open in IMG/M
3300031942|Ga0310916_10800573All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300032035|Ga0310911_10309194All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300032076|Ga0306924_11430840All Organisms → cellular organisms → Bacteria → Acidobacteria736Open in IMG/M
3300032089|Ga0318525_10576138All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300032180|Ga0307471_100101621All Organisms → cellular organisms → Bacteria2611Open in IMG/M
3300032205|Ga0307472_101208007All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300032261|Ga0306920_104181024All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil18.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.58%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.06%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.30%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.27%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.52%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.52%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000178Pristine groundwater from Oak Ridge Integrated Field Research Center, Tennessee (resequenced)EnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FW301_100493933300000178GroundwaterMSRVRGYCALIAVATLLSSAPFAQAALPHLRGIGEIRDWFNAGKGHVRLILLLSPT*
F24TB_1006063533300000550SoilVRRLILRARIAWVMTAFAIVLATVPITAQTLDHLRGIGEIRDWFNAARGHVRLILLLSPT
Ga0066395_1013401423300004633Tropical Forest SoilMMSRARIACTVATIAAVLTVHPFAAPPLPHLRGIGEVRDWFNAGNGHVRLILLLSPT*
Ga0066683_1008511733300005172SoilMQRLIARSRIACAVLALATVFARVPFAAPPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0066683_1070456023300005172SoilMRRLIVRSRTACAVIAFAAVFARAPFAASTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0066680_1083368813300005174SoilMRRLIARSRIACAVLALATVFARVPFAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0066673_1008644123300005175SoilMIGRVRIACAAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAEKGRVRLILLLSPT*
Ga0066679_1022344633300005176SoilVIERVRIACTTIAIAAVLVVRPFAAPTLPHLRGIEDIRSWFNAEKGRVRLILLLSPT*
Ga0066684_1058427823300005179SoilMIGRVRIACAAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAGKGRVRLILLLSPT*
Ga0066685_1019630533300005180SoilMQRLIARSRIACAVLALATVFARVPFAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0066685_1032007113300005180SoilMRYLVVRARIACTAIALAIVLVQAPFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0070709_1026913923300005434Corn, Switchgrass And Miscanthus RhizosphereVIHRLRLACTVVAVAAVLAARPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT*
Ga0070708_10021153633300005445Corn, Switchgrass And Miscanthus RhizosphereVIERIRLACTAIAIAAVLATRPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT*
Ga0066682_1058479223300005450SoilMRRLISRSRIAAAVFAFAVVFESTAFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSTT
Ga0066681_1009148523300005451SoilMIGRVRIACAAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAERGRVRLILLLSPT*
Ga0070698_10056540013300005471Corn, Switchgrass And Miscanthus RhizosphereMRRLISRSRIAVAMVALAMVSECTTLAQSTLPHLRGIAELRDWFNAGKGHVRLILLLSPT
Ga0070695_10112675213300005545Corn, Switchgrass And Miscanthus RhizosphereVIHRLRLACTALAVAAVLAARPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT*
Ga0066661_1061809313300005554SoilVIERVRIACTTIAIAAVLAVRPLAAPTLPHLRGIEDIRSWFNAEKGRVRLILLLSPT*
Ga0066707_1011091633300005556SoilMPRLIARSRIACAVLALATVFARVPFAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0066707_1024238723300005556SoilVRHLISRSRITAAVLALALLFARTPFAASTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0066704_1071056223300005557SoilMRRLISRSRIACAVLALATVLARIPLASAALEHLHGIDDMRGWFNAGKGHVRLILLLSPT
Ga0066700_1039568013300005559SoilSRSRIACAVLALATVLARIPFASAALEHLHGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0066670_1092235323300005560SoilMIGRVRIACTAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAEKGRVRLILLLS
Ga0066703_1023429623300005568SoilMRRLISRSRIACAVLALATVLARIPFASAALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0066705_1027440213300005569SoilMIGRVRIACTAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAEKGRVRLILL
Ga0066708_1039402223300005576SoilMIGRVRIACTAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAEKGRVRLILLLSPT*
Ga0068854_10153763423300005578Corn RhizosphereMMSRVRGCCALIAVAILFSGATFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT*
Ga0068859_10213538623300005617Switchgrass RhizosphereMCFRGYRALIAVALFATVLAGVPSTAPTLPHLRGIGEVRDWFNAGKGHVRLVLLLSPT*
Ga0066905_10011948613300005713Tropical Forest SoilWAISMMSRARVACTVAAIAAVLTVHPFAAPPLPHLRGIGEVRDWFNGGNGHVRLILLLSPT*
Ga0066903_10000763153300005764Tropical Forest SoilMLTRLRTACAIAALGVVFGVQLFAAPAALPHLRGVGEIRDWFNAGRGHVRLILLLSPT*
Ga0066903_10062395023300005764Tropical Forest SoilMLSRIRTACTVVAIAALLAVRPLAAPTGALPHLRGIGEIRDWFNAGKGHVRLILLLSPT*
Ga0066903_10160568213300005764Tropical Forest SoilMMSRARIACTVAAIAAVLTVHPFAAPPLPHLRGIGEVRDWFNAGNGHVRLILLL
Ga0066651_1083575123300006031SoilSADERCKAMRRLISRSRIAVAMCALATVFECTTFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT*
Ga0066652_10199305523300006046SoilMLGRVRTASAVLAFAALVAVRPFAAATTLPHLRGIDEVRDWFNAGKGHVRLILLLSPT*
Ga0070716_10163423023300006173Corn, Switchgrass And Miscanthus RhizosphereVIERIRLACTAIAIAAVLATRPFAAPTLPHLRGIEEIRGWFNAEKGKVRLI
Ga0066653_1025536213300006791SoilMQRLIARSRIACAVLALATVFARVPFAAPALEHLHEIYDIRGWFNAGKGHRRLILLVSPK
Ga0066665_1137466123300006796SoilMIARARVAFTAVVFAAVLAMRPYAGAGPLPHLRGIGEIRDWFNASQGHVRLILLLSPT*
Ga0075433_1173640223300006852Populus RhizosphereMIARVRAACTLVALAVVLAARPGAAPTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT*
Ga0075425_100000215393300006854Populus RhizosphereMGRVRIACAAAALAALVAVRPLAAPTLPHLRGIEDIRSWFNAEKGRVRLVLLLSPT*
Ga0075425_10024709223300006854Populus RhizosphereVNHRLRLACTAVAVAAVLAARPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT*
Ga0075425_10225998913300006854Populus RhizosphereMLPRIRLACTVFAFAAVLAALPFAAPTLPHLHGVEEIRDWFNAGKGHVRLILLLSPT*
Ga0075426_1078410623300006903Populus RhizosphereVIHRLRLACTAVAVAAVLAARPVAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT*
Ga0075424_10024602753300006904Populus RhizosphereACTLVALAVVLAARPGAAPTLPHLRGIGEIRDWFNAGQGHVRLILLLSPT*
Ga0075435_10072899513300007076Populus RhizosphereMLPRIRLACTVVAFAAVLAARPFAAPTLPHLHGVEEIRDWFNAGKGHVRLILLLSPT*
Ga0099791_1048637313300007255Vadose Zone SoilDMRRLISRSRIACAVLALATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0066710_10017546143300009012Grasslands SoilMRCLVARARIACTAIALAIVLVQAPFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0066710_10124731333300009012Grasslands SoilMRRLISRSRIAAAVFAFAVVFESTAFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0066710_10408773023300009012Grasslands SoilMRRLIARSRIACAVIALATVFARVPFAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0066710_10486260823300009012Grasslands SoilMQRLIARSRIACAVLALATVFARVPFAAPPALEHLHGIDDIRGWFNAGKGHVRLILLLSP
Ga0099829_1034523623300009038Vadose Zone SoilVRHLISRSRIAAAVLALALLFATTPFAASTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0099829_1106755623300009038Vadose Zone SoilMRRLISRSRIAVAVLALAAMLASTLFAASTLPHLRGIGEVRDWFNASKGHVRLILLLSPT
Ga0099828_1106851013300009089Vadose Zone SoilKDMRRLIAHSRVVCAVLAFATVFARTPFAASTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT*
Ga0099827_1185922123300009090Vadose Zone SoilMRRLISRSRIAVAVLALTATLASTPFAASTLPHLRGIGEVRDWFNASKGHVRLILLLSPT
Ga0066709_10314181013300009137Grasslands SoilVIERVRIACTTIAIAAVLAVRPFAAPTLPHLRGIEDIRSWFNAEKGRVRLILLLSPT*
Ga0099792_1062076323300009143Vadose Zone SoilLRTRLRIACTIALAALLAPRPFAAPALPHLRGIGEIREWFNAGNGHVRLILLLSPT*
Ga0114129_1051776923300009147Populus RhizosphereVRRLILRARIAWVMTAFAIVLATVPIPAQTLDHLRGIGEIRDWFNAARGHVRLILLLSPT
Ga0075423_1069391123300009162Populus RhizosphereMITVAAALAAILSRLAVAAPSLSHLRGIGEVRDWFNAGKGHVRLILLLSPT*
Ga0105249_1204728423300009553Switchgrass RhizosphereMSGAIRHRGCCALIAIAILISRAPFAQSTLPHLRGIGEVRDWFNAGKGHVRLVLLLSPT*
Ga0099796_1017732513300010159Vadose Zone SoilRLISRSRIAVAMVALAMVFESTTLAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT*
Ga0126372_1280254623300010360Tropical Forest SoilDRVNGNGRAIGMLRRVRTACTMAAVAIVLAVRLSAASTLAHLHGIEEIRDWFNANNGHVRVILLLSPT*
Ga0126383_1140831123300010398Tropical Forest SoilVIGRLRTACTIAAIAVVLAVRPFAASTLPHLHGIDEIRDWFNSGKGHVRLILLLSPT*
Ga0134127_1116982823300010399Terrestrial SoilMSKEIRRFVRACSRGCGALIAIAILVSRAPLAQSTLPHLRGIGEVRDWFNAGKGHVRLVLLLSPT*
Ga0134121_1316764213300010401Terrestrial SoilGQRVIHRLRLACTVVAVAAVLAARPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT
Ga0134123_1198822013300010403Terrestrial SoilLVVVFAVARAAQSTLPHLRGIGEIRDWFNAGKGRVRLILLLSPT*
Ga0137389_1068665413300012096Vadose Zone SoilMRRLISRSRIACVALALATVFARIPFAAGALEHLHGIDDVRGWFNAGIGHVRLILLLSPT
Ga0137389_1125567823300012096Vadose Zone SoilSRIAVAVLALAAMLASTLFAASTLPHLRGIGEVRDWFNASKGHVRLILLLSPT*
Ga0137388_1033827933300012189Vadose Zone SoilMRRLISRSRIACVALALATVFARIPCAAGALEHLHGIDDMRGWFNAGKGHVRLILLLSPT
Ga0137364_1145066123300012198Vadose Zone SoilRRLISRSRIAVAMVALAMVVESTTLAQPTLPHLRGIGEVRDWFNASKGHVRLILLLSPT*
Ga0137399_1068863933300012203Vadose Zone SoilRLISRSRIAAAALALAVLFARTPFAASTLPHLRGIGELRDWFNAGKGHVRLILLLSPT*
Ga0137399_1128672323300012203Vadose Zone SoilMRRLISRSRIACAVLALATVLARIPFASAALEHLHGIDDIRGWFNAGKGHLRLILLLSPT
Ga0137374_1046844723300012204Vadose Zone SoilMRPSIARVRLLFAAIGLAIIFAGTPAAATLPHLRGISEIREWFNSGKGHVRLILLLSPT*
Ga0137362_1073129013300012205Vadose Zone SoilMRRLISRSRIACAVLALATVLVRIPVASAALEHLHGIDDIRGWFNAAQGHVRLILLLSPT
Ga0137362_1148719923300012205Vadose Zone SoilIACGALALATVLARVPSAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0137370_1052372723300012285Vadose Zone SoilMRRLISRSRIAVAMVALAMVVESTTLAQPTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0137367_1036271323300012353Vadose Zone SoilMARVRLLFAAIGLAIMFAGSPAAATLPHLRGIGEIREWFNAGKGHVRLILLLSPT*
Ga0137366_1114047413300012354Vadose Zone SoilMARVRLLFAAIGLAIMFAGSPAAATLPHLRGIGEIREWFNAGKGHVRLILLLSPT
Ga0137360_1094304813300012361Vadose Zone SoilDDQLRRQRKGGKDMRRLISRSRIACAVLAFATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0137360_1127308423300012361Vadose Zone SoilMRRLISRSRIAVAMVALAMVFESTTLAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0137361_1080913223300012362Vadose Zone SoilMRRLISRSRIACAVLALATVLVRIPVASAALEHLHGIDDIRGWFNEGKGHVRLILLLSPT
Ga0137361_1112099313300012362Vadose Zone SoilMRRLISRSRIACAVLAFATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT
Ga0137361_1113936513300012362Vadose Zone SoilLISRSRIAVAMVALAMVFESTTLAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT*
Ga0137390_1030176823300012363Vadose Zone SoilLSIACAVLALATVLARIPFASAALEHLHGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0137390_1196903823300012363Vadose Zone SoilLIRRSRLGCVVIALATVLAQSPHAATALPHLRGIDEIRDWFNAGKGHVRLILLLSPT*
Ga0137395_1085387723300012917Vadose Zone SoilLRTRLRIACTVIALAALLAPRPFAASALPHLRGIGEIRDWFNAGNGHVRLILLLSPT*
Ga0137396_1100010013300012918Vadose Zone SoilLISRSRIACAVLALATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0137359_1097553023300012923Vadose Zone SoilMLRRVRTACTVAAIAAVFAARSFAAPTLPHLHGIEDIRNWFNANKGHVRLILLLSPT*
Ga0137419_1105556323300012925Vadose Zone SoilRIARTRRLSRTRLVFQVDDQLRRQRKEGKDMRRLISRSRIACAVLALATVFARVPFAAPALEHLRGIDDIRGWFNAGKGHVRLILLLSPT*
Ga0126375_1045204323300012948Tropical Forest SoilMMSRARVACTVAAIAAVLTVHPFAAPPLPHLRGIGEVRDWFNGGNGHVRLILLLSPT*
Ga0126369_1343850313300012971Tropical Forest SoilARAAAAIALAALVTRPLSGATLPHLRGIDEIRDWFNSGRGHVRLILLLSPT*
Ga0132258_1259534823300015371Arabidopsis RhizosphereMSRITARSRLVFAAIAFAVVCARNPFAAATLPHLRGISEIRDWFNAGTGHVRLILLLSPT
Ga0182035_1003526233300016341SoilMAALAAVLAVRLSAASTLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0184604_1011335523300018000Groundwater SedimentMRRLISRSYIAVAMVALAMVFESTTLAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0184605_1029103413300018027Groundwater SedimentMRRLISRSRIAVVMFALAVVFESTAIAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0184621_1010834723300018054Groundwater SedimentMRRLISRSPIAVAVFALAVLLGSKPFAQSSLPHLRGIGEVRDWFNASKGHVRLILLLSPT
Ga0184619_1037931423300018061Groundwater SedimentVRSLISRSRIACTVLALATLFARVPFAAQPLQQLHGIDDIRGWFNAGQGHVRLILLLSP
Ga0184618_1019804913300018071Groundwater SedimentMRRLISRSRIAVAVLALAVVFARTPVAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0066669_1036087933300018482Grasslands SoilMRGLTSRSRITVALLALAVLFARTPFAASTLPHLRGIAEIRDWFNAGKGHVRLILLLSPT
Ga0193726_1001461113300020021SoilMRRVTARVRFACAVLGFAAVCAGSPSAAPALPHLRGIDELRTWFNAGKGHVRLILLLSPT
Ga0210383_1050776223300021407SoilMVQMVRSRLACAVIAFAAVFARAPFGFPRAPFAASTLPHLHGIGEIRDWFNAGKGQVRLILLLSPT
Ga0210384_1010881923300021432SoilMARLVRSHIACALIAFAAVFATRPFAASTLPHLHGIGEIRDWFNAGRGHVRLILLLSPT
Ga0242666_112435913300022721SoilMTMARMMRARLACALIAFAAVFARVPFAASTLPHLHGIGEIRDWFNAGKGQVRVILLLSP
Ga0207684_1117009323300025910Corn, Switchgrass And Miscanthus RhizosphereVRGVTSRIRIVCGALALGIVLAGTPFAAASLPHLHGIEEIRDWFNAGKGHVRLILLLSPT
Ga0207646_1019949333300025922Corn, Switchgrass And Miscanthus RhizosphereVIERIRLACTAIAIAAVLATRPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT
Ga0207646_1026251923300025922Corn, Switchgrass And Miscanthus RhizosphereMRRLISRSRIAVAMVALAMVSECTTLAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0207640_1169210923300025981Corn RhizosphereMMSRVRGYRALIAVAILFSGATFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0207648_1036138913300026089Miscanthus RhizosphereRVRGYCALIAVAILFPGATFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0207675_10274494913300026118Switchgrass RhizosphereMMSRVRGCCALIAVAILFSGATFAQSTLPHLRGIGEIRDWFNAGKGHVRLILLLSPT
Ga0209240_114952823300026304Grasslands SoilMLRRVRSACTVAAIAAVFAARSFAAPTLPHLHGIEDIRNWFNANKGHVRLILLLSPT
Ga0209155_106422123300026316SoilMIGRVRIACAAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAERGRVRLILLLSPT
Ga0209159_109615523300026343SoilMQRLIARSRIACAVLALATVFARGPFAAPALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0209805_101118033300026542SoilVIERVRIACTTIAIAAVLAVRPLAAPTLPHLRGIEDIRSWFNAEKGRVRLILLLSPT
Ga0209474_10004547103300026550SoilMIGRVRIACTAAALAALVAAGPFAAPTLPHLRGVEDIRTWFNAEKGRVRLILLLSPT
Ga0209117_115451233300027645Forest SoilMRRLMSSSRIACAVLALATVFARVPSAAAALEHLHGIDDIRSWFNAGKGHVRLILLLSPT
Ga0209217_118019023300027651Forest SoilMRRLISRARIACAVLALTTVFAGTFFAAPLLPHLRGIDELRDWFNAGKGHVRLILLLSPT
Ga0209465_1010660623300027874Tropical Forest SoilMMSRARIACTVATIAAVLTVHPFAAPPLPHLRGIGEVRDWFNAGNGHVRLILLLSPT
Ga0307307_1014702833300028718SoilMRRLISRSRIVVAMCALAMVFESTAFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0307282_1021952533300028784SoilMRRLISRSRIAVAMFALAMVFESTAFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0307292_1022333823300028811SoilMRRLISRSRIAVAMFALAMMFESTAFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0307308_1009083123300028884SoilMRRLISRSRIAVAMCALAMVFESTTFAQSTLPHLRGIGELRDWFNAGKGHVRLILLLSPT
Ga0222749_1007207423300029636SoilMRRLISRSRLACAVLALATVFARVPFAASALEHLHGIDDIRGWFNAGKGHVRLILLLSPT
Ga0318541_1048462623300031545SoilMAALAVVLAVRLSAAATLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0318528_1025230523300031561SoilMIGRLRTACTIAAIAAVLAARPFAASTLPHLHGIDEIRDWFNSGKGHVRLILLLSPT
Ga0318528_1029834413300031561SoilMRRRFRTACTMAARAAVLAVRLSAASTLAHLHGIEEIRDWFNANNGHVRVI
Ga0306923_1008389423300031910SoilMLRRFRTACTMAALAAVLAVRLSAASTLAHLHGIEEIRDWFNANSGHVRVILLLSPT
Ga0306921_1105671023300031912SoilMRRRFRTACTMAALAAVLAVRLSAASTLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0310916_1080057333300031942SoilINGHGRAIAMLRRCRTACTMAALAVVLAVRLSAAATLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0310911_1030919423300032035SoilMLRRCRTACTMAALAVVLAVRLSAAATLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0306924_1143084033300032076SoilACTIAALAVVLAVRLSAAATLAHLHGIEEIRDWFNANNGHVRVILLLSPT
Ga0318525_1057613813300032089SoilIGRLRTACTIAAIAAVLAARPFAASTLPHLHGIDEIRDWFNSGKGHVRLILLLSPT
Ga0307471_10010162113300032180Hardwood Forest SoilAIAIAAVLATRPFAAPTLPHLRGIEEIRGWFNAEKGKVRLILLLSPT
Ga0307472_10120800723300032205Hardwood Forest SoilVIERIRLACTAIAIAAVLATRPFATPPLPHLRGIEEIRGWFNAEKGKVRLILLLSPT
Ga0306920_10418102423300032261SoilIACTSIALATVLATSPFGASSLPHLHGIDELRDWFNAGKGHVRLILLLSPT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.