Metagenome / Metatranscriptome Family F061116

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061116
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	64 residues
Representative Sequence	TDPPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAELPR
Number of Associated Samples	109
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.61 %
% of genes near scaffold ends (potentially truncated)	43.94 %
% of genes from short scaffolds (< 2000 bps)	93.18 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (21.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.152 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.51% Coil/Unstructured: 73.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF07991	IlvN	59.09
PF10369	ALS_ss_C	24.24
PF13710	ACT_5	5.30
PF02775	TPP_enzyme_C	4.55
PF01715	IPPT	1.52
PF00590	TP_methylase	0.76
PF01544	CorA	0.76
PF08447	PAS_3	0.76
PF01661	Macro	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0059	Ketol-acid reductoisomerase	Amino acid transport and metabolism [E]	118.18
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	59.09
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	1.52
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.76
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.97 %
Unclassified	root	N/A	28.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.97 %
Unclassified	root	N/A	28.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.45 %
Unclassified	root	N/A	28.03 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	28.03 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.91 %
Unclassified	root	N/A	28.03 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	60.61 %
Unclassified	root	N/A	28.03 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	46.21 %
Unclassified	root	N/A	28.03 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.52 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	28.03 %
Unclassified	root	N/A	28.03 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2.27 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.76 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.03 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2.27 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.52 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	0.76 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	0.76 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.03 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2.27 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1.52 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.76 %
Acidiphilium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp.	0.76 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.03 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2.27 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1.52 %
Arthrobacter sp. Hiyo8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Hiyo8	0.76 %
Acidiphilium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp.	0.76 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02JQQWJ	Not Available	510	Open in IMG/M
2170459017\|G14TP7Y01C8E6O	Not Available	623	Open in IMG/M
2199352025\|deepsgr__Contig_135670	Not Available	568	Open in IMG/M
3300001867\|JGI12627J18819_10263252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	693	Open in IMG/M
3300002568\|C688J35102_120894979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2093	Open in IMG/M
3300003219\|JGI26341J46601_10013704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2659	Open in IMG/M
3300004092\|Ga0062389_100998103	Not Available	1022	Open in IMG/M
3300004114\|Ga0062593_103463590	Not Available	506	Open in IMG/M
3300005329\|Ga0070683_101699700	Not Available	607	Open in IMG/M
3300005335\|Ga0070666_11033689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	610	Open in IMG/M
3300005347\|Ga0070668_101146549	Not Available	703	Open in IMG/M
3300005435\|Ga0070714_100710819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	970	Open in IMG/M
3300005436\|Ga0070713_100449588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp.	1210	Open in IMG/M
3300005436\|Ga0070713_102491763	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	500	Open in IMG/M
3300005437\|Ga0070710_11382093	Not Available	526	Open in IMG/M
3300005439\|Ga0070711_100603813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	916	Open in IMG/M
3300005439\|Ga0070711_101326409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	625	Open in IMG/M
3300005439\|Ga0070711_101461279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	596	Open in IMG/M
3300005533\|Ga0070734_10080262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1930	Open in IMG/M
3300005534\|Ga0070735_10043921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3004	Open in IMG/M
3300005534\|Ga0070735_10520585	Not Available	708	Open in IMG/M
3300005543\|Ga0070672_101612842	Not Available	582	Open in IMG/M
3300005548\|Ga0070665_102482385	Not Available	520	Open in IMG/M
3300005614\|Ga0068856_100260986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1748	Open in IMG/M
3300005712\|Ga0070764_11003528	Not Available	526	Open in IMG/M
3300005764\|Ga0066903_103681644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	825	Open in IMG/M
3300005764\|Ga0066903_105843476	Not Available	646	Open in IMG/M
3300005937\|Ga0081455_10067745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2973	Open in IMG/M
3300005937\|Ga0081455_10662391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	670	Open in IMG/M
3300006050\|Ga0075028_100629271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	640	Open in IMG/M
3300006052\|Ga0075029_100361538	Not Available	937	Open in IMG/M
3300006175\|Ga0070712_101179668	Not Available	666	Open in IMG/M
3300006893\|Ga0073928_10256154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1335	Open in IMG/M
3300006953\|Ga0074063_13271169	Not Available	530	Open in IMG/M
3300009093\|Ga0105240_12430932	Not Available	542	Open in IMG/M
3300009101\|Ga0105247_11108787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	625	Open in IMG/M
3300010361\|Ga0126378_10210103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2026	Open in IMG/M
3300010371\|Ga0134125_12092612	Not Available	615	Open in IMG/M
3300010376\|Ga0126381_100483764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1743	Open in IMG/M
3300010376\|Ga0126381_100542798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1646	Open in IMG/M
3300010398\|Ga0126383_13384632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	521	Open in IMG/M
3300012177\|Ga0153943_1156008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	502	Open in IMG/M
3300012212\|Ga0150985_102393864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1533	Open in IMG/M
3300012212\|Ga0150985_117439078	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012469\|Ga0150984_104657755	Not Available	656	Open in IMG/M
3300012469\|Ga0150984_118470797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. Hiyo8	522	Open in IMG/M
3300012951\|Ga0164300_10494159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	698	Open in IMG/M
3300012951\|Ga0164300_10691990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	616	Open in IMG/M
3300012961\|Ga0164302_11299061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	588	Open in IMG/M
3300013105\|Ga0157369_11719510	Not Available	637	Open in IMG/M
3300013297\|Ga0157378_13207622	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	508	Open in IMG/M
3300013306\|Ga0163162_11239845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	847	Open in IMG/M
3300013306\|Ga0163162_12714198	Not Available	570	Open in IMG/M
3300014325\|Ga0163163_10008149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	9291	Open in IMG/M
3300014501\|Ga0182024_12653464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300014745\|Ga0157377_11314849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	566	Open in IMG/M
3300014969\|Ga0157376_11900737	Not Available	632	Open in IMG/M
3300015371\|Ga0132258_10976631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2140	Open in IMG/M
3300015371\|Ga0132258_12228245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1375	Open in IMG/M
3300015372\|Ga0132256_102514816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	616	Open in IMG/M
3300015373\|Ga0132257_101725859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	803	Open in IMG/M
3300015374\|Ga0132255_103567050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300016270\|Ga0182036_10736157	Not Available	800	Open in IMG/M
3300016270\|Ga0182036_10801307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	767	Open in IMG/M
3300017947\|Ga0187785_10717464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	526	Open in IMG/M
3300018469\|Ga0190270_10433205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1230	Open in IMG/M
3300018469\|Ga0190270_11143187	Not Available	814	Open in IMG/M
3300018476\|Ga0190274_10253596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1598	Open in IMG/M
3300018476\|Ga0190274_10524939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1191	Open in IMG/M
3300020582\|Ga0210395_10013312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	6080	Open in IMG/M
3300020583\|Ga0210401_11565789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	516	Open in IMG/M
3300021168\|Ga0210406_10165054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1854	Open in IMG/M
3300021180\|Ga0210396_10658662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	907	Open in IMG/M
3300021180\|Ga0210396_10898668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	755	Open in IMG/M
3300021180\|Ga0210396_11610377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	530	Open in IMG/M
3300021388\|Ga0213875_10547279	Not Available	558	Open in IMG/M
3300021401\|Ga0210393_10085963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2495	Open in IMG/M
3300021402\|Ga0210385_10713229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	768	Open in IMG/M
3300021404\|Ga0210389_10926150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	678	Open in IMG/M
3300021404\|Ga0210389_11081296	Not Available	620	Open in IMG/M
3300021406\|Ga0210386_10229253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1580	Open in IMG/M
3300021420\|Ga0210394_11768632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	516	Open in IMG/M
3300021474\|Ga0210390_10998850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	684	Open in IMG/M
3300021475\|Ga0210392_10516579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	881	Open in IMG/M
3300021560\|Ga0126371_11679010	Not Available	759	Open in IMG/M
3300021560\|Ga0126371_11744304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	745	Open in IMG/M
3300022527\|Ga0242664_1118724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300022530\|Ga0242658_1236792	Not Available	511	Open in IMG/M
3300022718\|Ga0242675_1130273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	511	Open in IMG/M
3300022726\|Ga0242654_10330602	Not Available	568	Open in IMG/M
3300025898\|Ga0207692_10732578	Not Available	643	Open in IMG/M
3300025900\|Ga0207710_10153974	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300025916\|Ga0207663_10667730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	821	Open in IMG/M
3300025916\|Ga0207663_10689466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	808	Open in IMG/M
3300025916\|Ga0207663_10882240	Not Available	715	Open in IMG/M
3300025928\|Ga0207700_11135599	Not Available	698	Open in IMG/M
3300025934\|Ga0207686_10178510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1504	Open in IMG/M
3300025940\|Ga0207691_11143076	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300025944\|Ga0207661_11248774	Not Available	683	Open in IMG/M
3300025944\|Ga0207661_12106476	Not Available	510	Open in IMG/M
3300026078\|Ga0207702_10594507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1085	Open in IMG/M
3300026089\|Ga0207648_10243240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300027812\|Ga0209656_10314197	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300027825\|Ga0209039_10416323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	512	Open in IMG/M
3300027854\|Ga0209517_10185501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1297	Open in IMG/M
3300028379\|Ga0268266_12123540	Not Available	534	Open in IMG/M
3300028381\|Ga0268264_11820465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	619	Open in IMG/M
3300028793\|Ga0307299_10100099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1083	Open in IMG/M
3300028800\|Ga0265338_11148920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300030988\|Ga0308183_1047091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	853	Open in IMG/M
3300030990\|Ga0308178_1094875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	626	Open in IMG/M
3300031057\|Ga0170834_110896329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	693	Open in IMG/M
3300031091\|Ga0308201_10114402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	799	Open in IMG/M
3300031096\|Ga0308193_1052733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	615	Open in IMG/M
3300031099\|Ga0308181_1075413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	689	Open in IMG/M
3300031099\|Ga0308181_1149122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	546	Open in IMG/M
3300031114\|Ga0308187_10264130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	631	Open in IMG/M
3300031170\|Ga0307498_10454616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	515	Open in IMG/M
3300031366\|Ga0307506_10249149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	675	Open in IMG/M
3300031421\|Ga0308194_10144300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	728	Open in IMG/M
3300031572\|Ga0318515_10380466	Not Available	756	Open in IMG/M
3300031679\|Ga0318561_10174437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1161	Open in IMG/M
3300031792\|Ga0318529_10241762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	840	Open in IMG/M
3300031897\|Ga0318520_10882066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	563	Open in IMG/M
3300031947\|Ga0310909_10490009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300031954\|Ga0306926_10954933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1023	Open in IMG/M
3300032009\|Ga0318563_10177026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1148	Open in IMG/M
3300032174\|Ga0307470_10273149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1130	Open in IMG/M
3300032895\|Ga0335074_10821899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	862	Open in IMG/M
3300032898\|Ga0335072_10518904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1228	Open in IMG/M
3300033475\|Ga0310811_10315203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1787	Open in IMG/M
3300034672\|Ga0314797_098902	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.73%
Host-Associated	Host-Associated	26.52%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.42%
Plants	Host-Associated → Plants	25.76%
Aquatic	Environmental → Aquatic	5.30%
Fungi	Host-Associated → Fungi	0.76%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.61%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Sediment	Environmental → Aquatic → Sediment	1.52%
Roots	Host-Associated → Plants → Roots	1.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.48%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_06101820	2170459002	Grass Soil	VIIAGVRAMSGSTTAAPPTRETDTPGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAEAPR
4ZMR_04739570	2170459017	Switchgrass, Maize And Mischanthus Litter	MSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD
deepsgr_02199910	2199352025	Soil	MSGSTTAAPPTRETDTPGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAEAPR
JGI12627J18819_102632522	3300001867	Forest Soil	MSGLTNASTIPPRPPETSGRYLIVQPSGAGLTMLIDTVTGRSWFRIAAGTDHYAWRPMKFEPAPADIPR*
C688J35102_1208949793	3300002568	Soil	MSGFTSRDTETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDNRS*
JGI26341J46601_100137043	3300003219	Bog Forest Soil	MSGSLNAAPPTRETDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMRFEPATAELPR*
Ga0062389_1009981032	3300004092	Bog Forest Soil	MSGSTTFTPGPMRSNDVPGATGRYLIVQPSGTGLTMLIDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEFPR*
Ga0062593_1034635902	3300004114	Soil	MSGSTATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRIAAGTDHYAWRPMKFEPSSADLPR*
Ga0070683_1016997002	3300005329	Corn Rhizosphere	AMSGSTPGFSDTLPETNAPGRYMIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMQFEPKDADLPR*
Ga0070666_110336892	3300005335	Switchgrass Rhizosphere	MSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD*
Ga0070668_1011465492	3300005347	Switchgrass Rhizosphere	MSGFTSRDAETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAGGSDHYAWRPMKFEPSAAELPKDSRS*
Ga0070714_1007108191	3300005435	Agricultural Soil	MSGFTSRDTETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS*
Ga0070713_1004495881	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPM
Ga0070713_1024917631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSGTFRPSQQAASEPTGRFLIVQPSGAGLTMLVDTVTGKSWFRIAAGADHYAWRPMKFEPSPAELPT*
Ga0070710_113820931	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IQSWEIAIMSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR*
Ga0070711_1006038131	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD*
Ga0070711_1013264092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR*
Ga0070711_1014612791	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NSTITPRENNGPGRYVIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ*
Ga0070734_100802622	3300005533	Surface Soil	MSGSVTTAAPPPPPGQRTTEPTGRFLIVQPSGAGLTMLVDTMTGRSWFRIAAGTDHYAWRPMRFESTPAELPR*
Ga0070735_100439211	3300005534	Surface Soil	PAPRSNDTPGRYLIVQPSGAGLTMLVDTATGKSWFRIAAGTDHYAWRPMQFEATAAEGPQ
Ga0070735_105205851	3300005534	Surface Soil	MSATVTTATPSPLHRAAEPVGRFMIVQPSGAGLTMLIDTMTGRSWFRIAAGTDHYAWRPMKFEQSTAEPPR*
Ga0070672_1016128421	3300005543	Miscanthus Rhizosphere	MSGSTATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRITAGTDHYAWRPMKFEPSSADLPR*
Ga0070665_1024823851	3300005548	Switchgrass Rhizosphere	MPDTTSSTDAAGRYLIVQPSGAGLTMLVDTSTGRSWFRIAAGSDHYAWRPMKFEGAPADVPK*
Ga0068856_1002609862	3300005614	Corn Rhizosphere	MSGFTSRDTDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS*
Ga0070764_110035281	3300005712	Soil	MSGSTTFTPAPMRPNDVPGATGRYLIVQPSGTGLTMLIDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEIP
Ga0066903_1036816442	3300005764	Tropical Forest Soil	MSDSTPAADVPGRYLIVQPSGAGLTMLVDTLTGRSWFRIAAGADHYAWRPMKFEPSAAELPR*
Ga0066903_1058434762	3300005764	Tropical Forest Soil	MSGFTSRDAETPGRYMIVQPSGAGLTMLIDTVSGRSWFRIAAGTDHYAWRPMKFEPSPAE
Ga0081455_100677453	3300005937	Tabebuia Heterophylla Rhizosphere	MSGSVPTPQETETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMRFEPQSAEVPI*
Ga0081455_106623912	3300005937	Tabebuia Heterophylla Rhizosphere	MSGFASRDAETPGRYSIVQPSGAGLTMLIDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS*
Ga0075028_1006292712	3300006050	Watersheds	MSGSTTAAPPTRETDTPGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAEAPR*
Ga0075029_1003615382	3300006052	Watersheds	MSGSLNTAPPTRETDAPGRYLIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMKFEPSAADLPR*
Ga0070712_1011796681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR*
Ga0073928_102561543	3300006893	Iron-Sulfur Acid Spring	MSGSIGPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR*
Ga0074063_132711691	3300006953	Soil	GKHFSGEALDMSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD*
Ga0105240_124309321	3300009093	Corn Rhizosphere	LDMSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD*
Ga0105247_111087872	3300009101	Switchgrass Rhizosphere	MSGSTITPAPMRPNEVPGAAGRYLIVQPSGTGLTMLIDTVSGRSWFRIAAGADHYAWRPMKFEAAPAEIPR*
Ga0126378_102101032	3300010361	Tropical Forest Soil	MSGSLNAAPPTRETDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSAAEIPR*
Ga0134125_120926121	3300010371	Terrestrial Soil	MSGSTTPRDTETPGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMMFEPKSAELPR*
Ga0126381_1004837643	3300010376	Tropical Forest Soil	MSGSNRDAEKPGRFLIVQPSGAGLTMLVDTATGRSWFRIAAGADHYAWRPMKFEPSQAESPD*
Ga0126381_1005427983	3300010376	Tropical Forest Soil	MSGSTITPAPSRPNEVNGATGRYLIVQPSGTGLTMMVDTVSGRSWFRIAAGADHYAWRPMRFEATPAETPR*
Ga0126383_133846321	3300010398	Tropical Forest Soil	PGRYLIVQPSGAGLTMLVDTLTGRSWFRIAAGADHYAWRPMKFEPSAAELPR*
Ga0153943_11560081	3300012177	Attine Ant Fungus Gardens	IPPRNGADVPGRFIIVQPSGAGLTMLVDTVSGRSWFRIAAGTDHYAWRPMIFEPSPAEVPR*
Ga0150985_1023938643	3300012212	Avena Fatua Rhizosphere	MSDSTNTPPASQETGATGRYLIVQPAGAGLTMMVDTLGGRSWFRIAAGTDHYAWRPMKFEPSTAEIPR*
Ga0150985_1174390782	3300012212	Avena Fatua Rhizosphere	MSDSTITPTSSHETEASSHETKATGRYLIVQPAGAGLTMMVDTLTGRSWFRIAAGTDHYAWRPMKFEPSSAEAPR*
Ga0150984_1046577551	3300012469	Avena Fatua Rhizosphere	DTETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS
Ga0150984_1184707971	3300012469	Avena Fatua Rhizosphere	RIMSGSTTMPQDITEMPGRYLIVQPSGAGLTMMVDTITGRSWFRIAAGADHYAWRPMMFEPKDAELPR*
Ga0164300_104941592	3300012951	Soil	MSGFTSRDTETPGRYLIVQPSVAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDNRS*
Ga0164300_106919902	3300012951	Soil	AQPAGAGLTMLVDTMTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ*
Ga0164302_112990611	3300012961	Soil	QPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSAADLPSQ*
Ga0157369_117195102	3300013105	Corn Rhizosphere	MSGFTSRDTDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSAAELPKDSRS*
Ga0157378_132076222	3300013297	Miscanthus Rhizosphere	MSGSFRPSQQAASEPPGRFLIVQPSGAGLTMLVDTVTGKSWFRIAAGADHYAWRPMKFEPSPAELPT*
Ga0163162_112398452	3300013306	Switchgrass Rhizosphere	MSGFTSRDTDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDNRS*
Ga0163162_127141982	3300013306	Switchgrass Rhizosphere	ARERSSVGRGKHFSGEALDMSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD*
Ga0163163_100081496	3300014325	Switchgrass Rhizosphere	MSGFTSRETDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS*
Ga0182024_126534642	3300014501	Permafrost	MSGSMTTTPPPRTAEMPGRYLIVQPAGAGLTMMVDTATGKSWFRIAAGTDHYAWRPMKFEPSIAEGPR*
Ga0157377_113148491	3300014745	Miscanthus Rhizosphere	MSGSTPGFSDTLPETNAPGRYMIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMQFEPKDADLPR*
Ga0157376_119007372	3300014969	Miscanthus Rhizosphere	QNDLGSCHHRFRRIRAMSGSTITPAPMRPNEVPGAAGRYLIVQPSGSGLTMLIDTVSGRSWFRIAAGADHYAWRPMKFEAAPAEIPR*
Ga0132258_109766312	3300015371	Arabidopsis Rhizosphere	MSGSITAALPTRETDTPGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAEAPR*
Ga0132258_122282452	3300015371	Arabidopsis Rhizosphere	MSGSSDSLPETTATGRYVIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMQFEPKDADLPR*
Ga0132256_1025148162	3300015372	Arabidopsis Rhizosphere	ATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRIAAGTDHYAWRPMKFEPSSADLPR
Ga0132257_1017258592	3300015373	Arabidopsis Rhizosphere	MSGFTSRDTETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAETPKDSRS*
Ga0132255_1035670502	3300015374	Arabidopsis Rhizosphere	MSGSSDSLPETTATGRYLIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMQFEPKDADLPR*
Ga0182036_107361571	3300016270	Soil	MSGFTTTPQVADTPGRYLIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMKFEPSAADLPR
Ga0182036_108013071	3300016270	Soil	TDPPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAAELPR
Ga0187785_107174641	3300017947	Tropical Peatland	DAPGRYLIVQPSGAGLTMMVDTITGRSWFRIAAGADHYAWRPMKFEPTPADLPK
Ga0190270_104332052	3300018469	Soil	MSDSTNTPPQSHGAESPGRFLIVQPAGAGLTMMVDTMTGRSWFRIAAGTDHYAWRPMKFEPSSAEVPR
Ga0190270_111431871	3300018469	Soil	TTDAPGRYLIVQPSGAGLTMMVDTATGRSWFRIAAGADHYAWRPMQFEPAAADLPR
Ga0190274_102535962	3300018476	Soil	MSGSTTTQETGGPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSSADLPR
Ga0190274_105249392	3300018476	Soil	MSGSTATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRITAGTDHYAWRPMKFEPSSADLPR
Ga0210395_100133124	3300020582	Soil	MSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0210401_115657892	3300020583	Soil	MSGSLNTAPPTRETDAPGRYLIVQPSGAGLTMMVDTVTGRSWFRIAAGADHYAWRPMKFEPSAADLPR
Ga0210406_101650542	3300021168	Soil	MSGSIVPPPPRSNETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0210396_106586622	3300021180	Soil	FAPETIGEANDMSGLTNASTIPPRLPETSGRYLIVQPSGAGLTMLIDTVTGRSWFRIAAGTDHYAWRPMKFEPAPADIPR
Ga0210396_108986682	3300021180	Soil	VSESGLTTSPPQSAGEPGRYLIVQPSGPGLTMLIDTATGRSWFRITAGPDHYAWRPMKFEPAAAEVPS
Ga0210396_116103772	3300021180	Soil	MSGSVPPPPTTSIPPRNGADVPGRFIIVQPSGAGLTMLVDTVSGRSWFRIAAGTDHYAWRPMIFEPSPAEVPR
Ga0213875_105472792	3300021388	Plant Roots	MSGLSTSSRDGEIPGRYQIVQPSGAGLTMLIDTATGRSWFRIAAGSDHYAWRPMRFEPSPAELPKDSRS
Ga0210393_100859633	3300021401	Soil	MSGSTTITPAPMRPNDVPGAAGRYLIVQPSGTGLTMLIDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEIPR
Ga0210385_107132292	3300021402	Soil	FASVIIQSWEIAIMSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0210389_109261501	3300021404	Soil	YLIVQPSGTGLTMLIDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEIPR
Ga0210389_110812961	3300021404	Soil	VSEPGLTTSPPQSAGEPGRYLIVQPSGPGLTMLIDTATGRSWFRITAGPDHYAWRPMKFEPAAAEVP
Ga0210386_102292533	3300021406	Soil	MSGLTNASTIPPRPPETSGRYLIVQPSGAGLTMLIDTVTGRSWFRIAAGTDHYAWRPMKFEPAP
Ga0210394_117686322	3300021420	Soil	IAIMSGSIVPPPPRSNETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0210390_109988502	3300021474	Soil	LIVQPSGAGLTMLIDTVTGRSWFRIAAGTDHYAWRPMKFEPAPADIPR
Ga0210392_105165791	3300021475	Soil	GEPGRYLIVQPSGPGLTMLIDTATGRSWFRITAGPDHYAWRPMKFEPAAAEVPS
Ga0126371_116790101	3300021560	Tropical Forest Soil	MSGSTITPAPSRPNEVNGATGRYLIVQPSGTGLTMMVDTVSGRSWFRIAAGADHYAWRPMRFEATPAETPR
Ga0126371_117443042	3300021560	Tropical Forest Soil	MSGTNQDAEKPGRFLIVQPSGAGLTMLVDTATGRSWFRIAAGADHYAWRPMKFEPSPAESPD
Ga0242664_11187242	3300022527	Soil	MSGSTTITPAPMRPNDVPGAAGRYLIVQPSGTGLTMLVDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEFPR
Ga0242658_12367921	3300022530	Soil	GRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ
Ga0242675_11302732	3300022718	Soil	IAIMSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0242654_103306022	3300022726	Soil	GRYLIVQPSGTGLTMLIDTVSGRSWFRIAAGSDHYAWRPMKFEPAPAEIPR
Ga0207692_107325781	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSGSTTTPRETDVPGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRP
Ga0207710_101539743	3300025900	Switchgrass Rhizosphere	LIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS
Ga0207663_106677301	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD
Ga0207663_106894661	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0207663_108822401	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PNLAGRDWIMSGTFRPSPQAASEPTGRFLIVQPSGAGLTMLVDTVTGKSWFRIAAGADHYAWRPMKFEPSPAELPT
Ga0207700_111355992	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSDSTTTPRETGVPGRYLITQPSGPGLTILVDTVTGRSWFRITAGTDHYAWRP
Ga0207686_101785103	3300025934	Miscanthus Rhizosphere	EALDMSGANFGQESERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD
Ga0207691_111430762	3300025940	Miscanthus Rhizosphere	LIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDNRS
Ga0207661_112487741	3300025944	Corn Rhizosphere	MSGFTSRDTDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPS
Ga0207661_121064761	3300025944	Corn Rhizosphere	MSGSTATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRIAAGADHYAWRPMKFEPSPAELPD
Ga0207702_105945072	3300026078	Corn Rhizosphere	MSGFTSRDTDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDSRS
Ga0207648_102432403	3300026089	Miscanthus Rhizosphere	HRTMSGSTATPRDSDPPGRYIIVQPSGAGLTMLVDTITGRSWFRIAAGTDHYAWRPMKFEPSSADLPR
Ga0209656_103141972	3300027812	Bog Forest Soil	MSGSLNAAPPTRETDTPGRYLIVQPSGADLTMMVDTVTGRSWFRIAAGADHYAWRPMKFEPSAAEIPR
Ga0209039_104163232	3300027825	Bog Forest Soil	TPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMRFEPATAELPR
Ga0209517_101855012	3300027854	Peatlands Soil	MSGYATTEPSPPATEVPGRYLIVQPAGTGLTMMVDTATGRSWFRIAAGADHYAWRPMKFEPSTAEVPR
Ga0268266_121235402	3300028379	Switchgrass Rhizosphere	MPDTTSSTDAAGRYLIVQPSGAGLTMLVDTSTGRSWFRIAAGSDHYAWRPMKFEGAPADVPK
Ga0268264_118204651	3300028381	Switchgrass Rhizosphere	ERTGRFLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPAELPD
Ga0307299_101000992	3300028793	Soil	MSGSTTTPRATDVSGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ
Ga0265338_111489201	3300028800	Rhizosphere	MSGSTVTPAPMRPNDVAGTAGRYLIVQPSGTGLTMLIDTTSGRSWFRIAAGADHYAWRPMRFEPAAAEIPR
Ga0308183_10470912	3300030988	Soil	MSGTTTPETSVTGRYLIAQPAGAGLTMLVDTDTGRSWFRIAAGTDHYA
Ga0308178_10948752	3300030990	Soil	IMSGSTTTPRESFTTMPRETSVAGRYLIAQPAGAGLTMLVDTDTGRSWFRIAAGTDHYAWRPMKFEPSTADLPSQ
Ga0170834_1108963291	3300031057	Forest Soil	SVIIQSWEIAVMSGSIVPPPPRSSETPGRYLIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0308201_101144022	3300031091	Soil	ESFTTTPRETSVTGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSPADLPSQ
Ga0308193_10527332	3300031096	Soil	IMSSSTTTPRESFTTTPRETSVTGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSVADLPSQ
Ga0308181_10754132	3300031099	Soil	MSGTTTPETSVTGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYA
Ga0308181_11491221	3300031099	Soil	DSIMSGSTTTPRATDVSGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ
Ga0308187_102641301	3300031114	Soil	RRHRIMSGTTTPETSVTGRYLIAQPAGASLTMLVDTDTGRSWFRIAAGTDHYA
Ga0307498_104546162	3300031170	Soil	YLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADLPSQ
Ga0307506_102491491	3300031366	Soil	MSGSTTTSRENSTITPRENNGPGRYVIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSPADLPSQ
Ga0308194_101443002	3300031421	Soil	ESFTTTPRETSVTGRYLIAQPAGAGLTMLVDTVTGRSWFRIAAGTDHYAWRPMKFEPSAADFPSQ
Ga0318515_103804662	3300031572	Soil	MSGSLNAAPPTRETDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSAAEIPR
Ga0318561_101744372	3300031679	Soil	TDTPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGADHYAWRPMKFEPSAAEIPR
Ga0318529_102417622	3300031792	Soil	MSGFTTTPQVADTPGRYLIVQPSGAGLTMLVDTATGRSWFRIAAGTDHYAWRPMKFEPSPAEFPT
Ga0318520_108820661	3300031897	Soil	YLIVQPSGAGLTMLVDTATGRSWFRIAAGTDHYAWWPMKFEPTSADLPR
Ga0310909_104900093	3300031947	Soil	MSGFTTTPQVADTPGRYLIVQPSGAGLTMLVDTATGRSWFRIAAGTDHYAWR
Ga0306926_109549331	3300031954	Soil	MSGFTTTPQVADTPGRYLIVQPSGAGLTMLVDTATGRSWFRIAAGTDHYAWRPMKFEP
Ga0318563_101770262	3300032009	Soil	MSGFTTTPQVADTPGRYLIVQPSGAGLTMLVDTATGRSWFRIAAGTDHYEWRPMKFEPSPAEFPT
Ga0307470_102731491	3300032174	Hardwood Forest Soil	LIVQPAGAGLTMMVDTVTGKSWFRIAAGTDHYAWRPMKFEPSAAEGPR
Ga0335074_108218992	3300032895	Soil	MSGLTTSTVPAPTNSVPPRPAGEVPGRFMIVQPAGAGLTMLVDTMSGRSWFRIAAGTDHYAWRPMKFEPSPADVPT
Ga0335072_105189042	3300032898	Soil	MSGLSTASTIPPRSPDTPGRYLVVQPSGAGLTMLVDTATGRSWFRIAAGTDHYAWRPMQFEPKTAETPR
Ga0310811_103152032	3300033475	Soil	MSGSTVTPAPMRPNDVLGAAGRYLIVQPSGTGLTMLIDTMSGRSWFRIAAGADHYAWRPMKFEAAPAEIPR
Ga0314797_098902_114_317	3300034672	Soil	MSGFTSRDTETPGRYLIVQPSGAGLTMLVDTVTGRSWFRIAAGSDHYAWRPMKFEPSPAELPKDNRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences