Metagenome / Metatranscriptome Family F061077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061077
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	86 residues
Representative Sequence	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNERVVHLRREFLPGEES
Number of Associated Samples	98
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.79 %
% of genes near scaffold ends (potentially truncated)	30.30 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.758 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.939 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.970 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.04% β-sheet: 0.00% Coil/Unstructured: 46.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00933	Glyco_hydro_3	25.76
PF02265	S1-P1_nuclease	20.45
PF01915	Glyco_hydro_3_C	5.30
PF13370	Fer4_13	0.76
PF01609	DDE_Tnp_1	0.76
PF04909	Amidohydro_2	0.76
PF14310	Fn3-like	0.76
PF07691	PA14	0.76
PF13377	Peripla_BP_3	0.76
PF13407	Peripla_BP_4	0.76
PF02768	DNA_pol3_beta_3	0.76
PF03486	HI0933_like	0.76
PF13602	ADH_zinc_N_2	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	31.06
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.52
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.52
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.76
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.76
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.76
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.76
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.76
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.76
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.76
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.76
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.76
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.76
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.76
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.76
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.76
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.76 %
Unclassified	root	N/A	49.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.76 %
Unclassified	root	N/A	49.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.76 %
Unclassified	root	N/A	49.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.03 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	3.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.30 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	3.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	5.30 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5.30 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	5.30 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
unclassified Phyllobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae	0.76 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	5.30 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
unclassified Sorangiineae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae	0.76 %
Phyllobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae → Phyllobacteriaceae bacterium	0.76 %
unclassified Bauldia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia	0.76 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.24 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	5.30 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Sorangiineae bacterium NIC37A_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	0.76 %
Bauldia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.	0.76 %
Phyllobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae → Phyllobacteriaceae bacterium	0.76 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0570426	Not Available	575	Open in IMG/M
3300000789\|JGI1027J11758_12617786	Not Available	657	Open in IMG/M
3300001593\|JGI12635J15846_10034183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4033	Open in IMG/M
3300001867\|JGI12627J18819_10067855	Not Available	1483	Open in IMG/M
3300001867\|JGI12627J18819_10418885	Not Available	546	Open in IMG/M
3300002245\|JGIcombinedJ26739_100089241	Not Available	2875	Open in IMG/M
3300002245\|JGIcombinedJ26739_100354712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1347	Open in IMG/M
3300002245\|JGIcombinedJ26739_100558058	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300002245\|JGIcombinedJ26739_101659339	Not Available	537	Open in IMG/M
3300003219\|JGI26341J46601_10001922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6834	Open in IMG/M
3300003219\|JGI26341J46601_10015853	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300003219\|JGI26341J46601_10108369	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300003368\|JGI26340J50214_10035091	Not Available	1463	Open in IMG/M
3300003368\|JGI26340J50214_10035111	Not Available	1463	Open in IMG/M
3300003505\|JGIcombinedJ51221_10362454	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300004080\|Ga0062385_11242105	Not Available	511	Open in IMG/M
3300004479\|Ga0062595_100675368	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005187\|Ga0066675_10491991	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	916	Open in IMG/M
3300005332\|Ga0066388_100191127	Not Available	2663	Open in IMG/M
3300005332\|Ga0066388_105338205	Not Available	652	Open in IMG/M
3300005439\|Ga0070711_100481633	Not Available	1020	Open in IMG/M
3300005455\|Ga0070663_102075036	Not Available	512	Open in IMG/M
3300005546\|Ga0070696_101757434	Not Available	535	Open in IMG/M
3300005548\|Ga0070665_101356838	Not Available	720	Open in IMG/M
3300005764\|Ga0066903_100090049	All Organisms → cellular organisms → Bacteria	4070	Open in IMG/M
3300005764\|Ga0066903_101365080	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300005764\|Ga0066903_108714022	Not Available	516	Open in IMG/M
3300005994\|Ga0066789_10108674	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300006057\|Ga0075026_100588443	Not Available	652	Open in IMG/M
3300006176\|Ga0070765_100892782	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006176\|Ga0070765_101099639	Not Available	751	Open in IMG/M
3300006893\|Ga0073928_10947527	Not Available	588	Open in IMG/M
3300010043\|Ga0126380_10538444	Not Available	905	Open in IMG/M
3300010048\|Ga0126373_10942328	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300010048\|Ga0126373_11260497	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300010154\|Ga0127503_11279041	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010339\|Ga0074046_10394419	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300010341\|Ga0074045_10517588	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010343\|Ga0074044_10221966	Not Available	1252	Open in IMG/M
3300010360\|Ga0126372_13172419	Not Available	511	Open in IMG/M
3300010376\|Ga0126381_100244595	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300010376\|Ga0126381_101758649	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300010379\|Ga0136449_100420699	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2360	Open in IMG/M
3300010379\|Ga0136449_100568511	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300010398\|Ga0126383_12550433	Not Available	595	Open in IMG/M
3300012089\|Ga0153924_1004448	All Organisms → cellular organisms → Bacteria	4478	Open in IMG/M
3300012961\|Ga0164302_10064859	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1879	Open in IMG/M
3300012971\|Ga0126369_10361800	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300012971\|Ga0126369_10526394	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300013296\|Ga0157374_12236397	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300014164\|Ga0181532_10064702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2366	Open in IMG/M
3300014968\|Ga0157379_12034075	Not Available	568	Open in IMG/M
3300014969\|Ga0157376_12136506	Not Available	598	Open in IMG/M
3300016270\|Ga0182036_10309163	Not Available	1205	Open in IMG/M
3300016270\|Ga0182036_10493306	Not Available	969	Open in IMG/M
3300016270\|Ga0182036_10637008	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300016387\|Ga0182040_10108363	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300016422\|Ga0182039_10967022	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300016422\|Ga0182039_11259464	Not Available	669	Open in IMG/M
3300018037\|Ga0187883_10496989	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300020579\|Ga0210407_10134327	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300020579\|Ga0210407_10251164	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300020580\|Ga0210403_10626707	Not Available	867	Open in IMG/M
3300020582\|Ga0210395_10092989	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300021088\|Ga0210404_10564405	Not Available	646	Open in IMG/M
3300021170\|Ga0210400_10481165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1025	Open in IMG/M
3300021171\|Ga0210405_10103799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2244	Open in IMG/M
3300021171\|Ga0210405_11422509	Not Available	504	Open in IMG/M
3300021178\|Ga0210408_11077029	Not Available	619	Open in IMG/M
3300021180\|Ga0210396_10287898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1456	Open in IMG/M
3300021181\|Ga0210388_10553471	Not Available	1008	Open in IMG/M
3300021358\|Ga0213873_10053584	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300021358\|Ga0213873_10105644	Not Available	814	Open in IMG/M
3300021361\|Ga0213872_10001802	All Organisms → cellular organisms → Bacteria	13320	Open in IMG/M
3300021361\|Ga0213872_10043089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2057	Open in IMG/M
3300021361\|Ga0213872_10077473	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300021372\|Ga0213877_10087602	Not Available	934	Open in IMG/M
3300021372\|Ga0213877_10124824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	799	Open in IMG/M
3300021377\|Ga0213874_10146480	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300021388\|Ga0213875_10137725	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300021402\|Ga0210385_10207905	Not Available	1425	Open in IMG/M
3300021405\|Ga0210387_10266092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1502	Open in IMG/M
3300021405\|Ga0210387_10352016	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1301	Open in IMG/M
3300021407\|Ga0210383_10288820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1410	Open in IMG/M
3300021420\|Ga0210394_10420948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1176	Open in IMG/M
3300021420\|Ga0210394_10474510	Not Available	1101	Open in IMG/M
3300021432\|Ga0210384_11747828	Not Available	527	Open in IMG/M
3300021433\|Ga0210391_11215726	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300021439\|Ga0213879_10004249	Not Available	2729	Open in IMG/M
3300021444\|Ga0213878_10092105	Not Available	1223	Open in IMG/M
3300021478\|Ga0210402_11419479	Not Available	621	Open in IMG/M
3300021479\|Ga0210410_11592733	Not Available	546	Open in IMG/M
3300021560\|Ga0126371_10489647	Not Available	1377	Open in IMG/M
3300024288\|Ga0179589_10436961	Not Available	603	Open in IMG/M
3300025939\|Ga0207665_10370130	Not Available	1085	Open in IMG/M
3300026291\|Ga0209890_10111198	Not Available	941	Open in IMG/M
3300027439\|Ga0209332_1063670	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027537\|Ga0209419_1126150	Not Available	511	Open in IMG/M
3300027651\|Ga0209217_1150490	Not Available	644	Open in IMG/M
3300027660\|Ga0209736_1062108	Not Available	1047	Open in IMG/M
3300027684\|Ga0209626_1154677	Not Available	606	Open in IMG/M
3300027824\|Ga0209040_10252618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → unclassified Sorangiineae → Sorangiineae bacterium NIC37A_2	883	Open in IMG/M
3300027824\|Ga0209040_10339293	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300027874\|Ga0209465_10606283	Not Available	542	Open in IMG/M
3300027908\|Ga0209006_10046309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → unclassified Phyllobacteriaceae → Phyllobacteriaceae bacterium	3914	Open in IMG/M
3300027908\|Ga0209006_10323068	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300027908\|Ga0209006_10343695	Not Available	1265	Open in IMG/M
3300028047\|Ga0209526_10137666	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300028047\|Ga0209526_10546510	Not Available	749	Open in IMG/M
3300028379\|Ga0268266_11272630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.	711	Open in IMG/M
3300028759\|Ga0302224_10098786	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300028798\|Ga0302222_10419353	Not Available	523	Open in IMG/M
3300028906\|Ga0308309_10655267	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300028906\|Ga0308309_10834129	Not Available	801	Open in IMG/M
3300028906\|Ga0308309_11714674	Not Available	533	Open in IMG/M
3300029999\|Ga0311339_11227796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300030617\|Ga0311356_10137319	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300031573\|Ga0310915_10161656	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031708\|Ga0310686_104357450	All Organisms → cellular organisms → Bacteria	23662	Open in IMG/M
3300031754\|Ga0307475_11588020	Not Available	500	Open in IMG/M
3300031833\|Ga0310917_10128986	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300031890\|Ga0306925_10802961	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031890\|Ga0306925_11835322	Not Available	579	Open in IMG/M
3300031946\|Ga0310910_10706966	Not Available	796	Open in IMG/M
3300031947\|Ga0310909_11643527	Not Available	508	Open in IMG/M
3300031954\|Ga0306926_12054087	Not Available	641	Open in IMG/M
3300031962\|Ga0307479_10569743	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1115	Open in IMG/M
3300032160\|Ga0311301_10097112	All Organisms → cellular organisms → Bacteria	5809	Open in IMG/M
3300032180\|Ga0307471_102374961	Not Available	670	Open in IMG/M
3300032180\|Ga0307471_102998617	Not Available	599	Open in IMG/M
3300032892\|Ga0335081_10809839	Not Available	1118	Open in IMG/M
3300032955\|Ga0335076_10357913	Not Available	1346	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.39%
Host-Associated	Host-Associated	10.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.55%
Aquatic	Environmental → Aquatic	9.85%
Plants	Host-Associated → Plants	9.85%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.52%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Peat	Environmental → Terrestrial → Peat	3.03%
Roots	Host-Associated → Plants → Roots	1.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.97%
Loam	Environmental → Terrestrial → Soil → Loam	24.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.52%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.79%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.03%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.52%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_05704261	2228664022	Soil	MKTEDAITILDHFACTLLPIAWQMNNGNMKEAVRDSYEVALEVLKQRKTFHSRALAEIDNQPGEIDAHEFNEQVVHLRREFPSDEQS
JGI1027J11758_126177861	3300000789	Soil	MKTEDAITILDHFACTLLPIAXQMNNGNMKEAVXDSYEVALEVLKQRKSFHSRALAEVDSRPGEIDAHEFN
JGI12635J15846_100341834	3300001593	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNIKDAVKDSYEVALEVLKQRKAFHSRALAEIESRPGEIDAREFNDRVVHLRGESRPGEEN*
JGI12627J18819_100678551	3300001867	Forest Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRAAAYLHDN
JGI12627J18819_104188851	3300001867	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALGEIDSRPGEIDAHEFNERVVHLRREYYPGGES*
JGIcombinedJ26739_1000892412	3300002245	Forest Soil	MKTLDVVTVLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLKQRKGFHSRALSEMKIGETEVDAASFNELIGRAAGYLRYDEK*
JGIcombinedJ26739_1003547121	3300002245	Forest Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKGFHSRALAEIDSRPGEIDAHEFNDQVVHLRRELRQDDES*
JGIcombinedJ26739_1005580582	3300002245	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDRVLHLGSEYRPGEED*
JGIcombinedJ26739_1016593392	3300002245	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNIKDAVKDSYEVALEVLKQRKXFHSRALAEIESRPGEIDAREFNDRVVHLRGESRPGEEN*
JGI26341J46601_100019227	3300003219	Bog Forest Soil	MKTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRTEEVDADAFNDRVVHLRGRSSRES*
JGI26341J46601_100158531	3300003219	Bog Forest Soil	ACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRTEEVDADAFNDRVVHLRGRSSRES*
JGI26341J46601_101083691	3300003219	Bog Forest Soil	ILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRSEEVDADAFNDRVVYLRGRSNRES*
JGI26340J50214_100350912	3300003368	Bog Forest Soil	KTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRTEEVDADAFNDRVVHLRGRSSRES*
JGI26340J50214_100351112	3300003368	Bog Forest Soil	KTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRSEEVDADAFNDRVVYLRGRSNRES*
JGIcombinedJ51221_103624542	3300003505	Forest Soil	MKTDDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHSRALEEIESWPGEIDAHKFNDRVVHLPRELHPGEES*
Ga0062385_112421051	3300004080	Bog Forest Soil	MKTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRSEEVDADAFNDRVVHLRGRSIQES*
Ga0062595_1006753681	3300004479	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKTFHSRALAEIDNQPGEIDAHEFNEQVVHLRREFPSDEQS*
Ga0066675_104919912	3300005187	Soil	MKTKDAITILDHFACALLPVALQMNNGNLKDAVTDSYEGALEVLKQRKSFHTRALERIDVEPGELDALEFNERIVRPRKESRAGEEG*
Ga0066388_1001911272	3300005332	Tropical Forest Soil	MKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDPAEFNERIVHSSDDPRPGEER*
Ga0066388_1053382052	3300005332	Tropical Forest Soil	MKTQEAVTILDHFAFALLPIALQMNNGNVKDAVKDSYEVALEVLKQRKSFHDRALEQLQSYAAMIDAPEFNDRINRPKEI*
Ga0070711_1004816332	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNERVVHLRREFLPGEES*
Ga0070663_1020750362	3300005455	Corn Rhizosphere	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALVEIDSRPGEIDAHEFNERVVHLR
Ga0070696_1017574341	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKTFHSRALAEIDNQPGEIDTHEFNEQVVHLRREFPSDEQS*
Ga0070665_1013568382	3300005548	Switchgrass Rhizosphere	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALVEIDSRPGEIDAHEFNERVVHLRREYHPGEES*
Ga0066903_1000900492	3300005764	Tropical Forest Soil	MKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDAAEFNERIVHSSDDPRPGEER*
Ga0066903_1013650801	3300005764	Tropical Forest Soil	VLDHFACTLLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALTELKIGRREIDAASFNDQFGRTAEYLQDAEE*
Ga0066903_1087140221	3300005764	Tropical Forest Soil	MKTLDVVTTLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKNFHSRALMELKIGEREIDAASFNEQIGRAAGYLHDNEE*
Ga0066789_101086742	3300005994	Soil	VAFRHAIGCLGRAHRYTRHMKTEDAITILDHFACTLLPVTMQMNNGNMKDAVKDSYEVALEVLKQRKDFHSRALAEIDNGPGEIDAHEFNERVVYLRREIRSGEES*
Ga0075026_1005884431	3300006057	Watersheds	MKTLDAITILDYFACALLPVSLQMNNGNMKVAVTNSYACALEVLRQRKSFHNRALERSENPADPLDAAMFNERIVRPREDPAWGEE
Ga0070765_1008927821	3300006176	Soil	MKTLDGITILDYFACALLPVSLQMNNGKMKVAVTKSYGCALEVLRQRKSFHNRALERSESPAGPQDAAMFNERIVRPREDPAWGEE*
Ga0070765_1010996392	3300006176	Soil	MKTDDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRVVHLPRELHPGEES*
Ga0073928_109475272	3300006893	Iron-Sulfur Acid Spring	MTISLEQAETRAFRHAIGCLGRTHRYTRHMKTEDAITILDHFACTLLPVTMQMNNGNMKDAVKDSYEVALEVLKQRKDFHSRALAEIDSGPGEIDAHEFNERVVYLRREIRSGEES*
Ga0126380_105384441	3300010043	Tropical Forest Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALTELKIGEREIDAASFNEQIGRAAGYLRDNEE*
Ga0126373_109423282	3300010048	Tropical Forest Soil	SMKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDPAEFNERIVHSSDDPRPGEER*
Ga0126373_112604971	3300010048	Tropical Forest Soil	MKTLDVITVLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALAELKIGRREIDATSFNDQFGRTAEYLQDAEE*
Ga0127503_112790411	3300010154	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRVVHLPRELHPGEES*
Ga0074046_103944191	3300010339	Bog Forest Soil	MKTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHAMAVEESGSRSEEVDADAFNDRVVYLRGRSNRES*
Ga0074045_105175881	3300010341	Bog Forest Soil	MKTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRSEEVDADAFNDRVVYLRGRSNRES*
Ga0074044_102219661	3300010343	Bog Forest Soil	AITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRTEEVDADAFNDRVVHLRGRSSRES*
Ga0126372_131724191	3300010360	Tropical Forest Soil	MKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDPAEFNERIVHSSDDP
Ga0126381_1002445953	3300010376	Tropical Forest Soil	MKTQDAVTILDHFAFALLPIALQMNNGNVKDAVKDSYEVALEVLKQRKSFHDRALEQLQSYAAMIDAPEFNDRINRPKEI*
Ga0126381_1017586492	3300010376	Tropical Forest Soil	WALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDPAEFNERIVHSSDDPRPGEER*
Ga0136449_1004206991	3300010379	Peatlands Soil	MKTDEAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPAEIDAYEFNDRVVHLRREFRQGEES*
Ga0136449_1005685112	3300010379	Peatlands Soil	MKTDDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALVEIDSRPAEIDAYEFNDRVVHLRREFRPGEES*
Ga0126383_125504332	3300010398	Tropical Forest Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALTELKIGEREIDAASFNEQIGRVTGYLHDGTLVSS*
Ga0153924_10044484	3300012089	Attine Ant Fungus Gardens	MKTQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARALDESSNWIGEVDAEKFNDRVVHLRRRPGEESQVWDQSLSSPQ*
Ga0164302_100648592	3300012961	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALVEIDSRPGEIDAHEFNERVVHLRREYHPGEEN*
Ga0126369_103618002	3300012971	Tropical Forest Soil	MKTEDAVTILDHFAWALLPIALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEARAGRLDAAEFNERIVHSSDDPRPGEER*
Ga0126369_105263942	3300012971	Tropical Forest Soil	MKTLDVITVLDHFACTLLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALTELKIGEREIDAASFNEQIGRAAGYLRDNEE*
Ga0157374_122363971	3300013296	Miscanthus Rhizosphere	TRLMKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALVEIDSRPGEIDAHEFNERVVHLRREYHPGEES*
Ga0181532_100647022	3300014164	Bog	MKTHDAITILDHFACALLPVALQMNNGNMRGAVKDSYEGALEMLRQRAGFHARTLEESLTWSGEIDPEAFNNCVIRLGRSSGEES*
Ga0157379_120340751	3300014968	Switchgrass Rhizosphere	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKTFHSRALAEIDNQPREIDTHEFNEQVVHL
Ga0157376_121365061	3300014969	Miscanthus Rhizosphere	MKTEDAITILDHVACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKTFHSRALAEIDNQPGEIDAHEFNEQVVHLRREFPSDEQS*
Ga0182036_103091631	3300016270	Soil	SVESLMKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRATGYLHDNEE
Ga0182036_104933061	3300016270	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALMELKIGEREIDAASFNEQIGRATGYLHDGT
Ga0182036_106370082	3300016270	Soil	AFGSVESLMKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRATGYLHDNEE
Ga0182040_101083632	3300016387	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGAFEVLRQRKSFHSRALTELKIGEREIDAASFNEQIGRAAGYLRDNEE
Ga0182039_109670222	3300016422	Soil	MKTLDVVTTLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKTGEREIDAASFNEQIGRAAGYMHADEE
Ga0182039_112594642	3300016422	Soil	MKTLDVITVLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALAELKIGRREIDATSFNDQFGRTAEYLQDAEE
Ga0187883_104969891	3300018037	Peatland	TILDHFACALLPVALQMNNGNMRGAVKDSYEGALEVLRQRAGFHARAVEESQSWSGEVDPDAFNDRVVRLRRSSGAEN
Ga0210407_101343272	3300020579	Soil	MKTDDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHSRALEEIESWPGEIDAHKFNDRVVHLPRELHPGEES
Ga0210407_102511642	3300020579	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRVVHLPRELHPGEES
Ga0210403_106267072	3300020580	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHSRALEEIESWPGEIDAHKFNDRVVHLPRELHPGEES
Ga0210395_100929892	3300020582	Soil	MKTEDAVTILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNERVVHLRREFLPGEES
Ga0210404_105644052	3300021088	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRTGFHSRALAEIDSRPGEIDAHEFNDQVVHLRRELRPD
Ga0210400_104811651	3300021170	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKGFHSRALAEIDSRPGEIDAHEFNDQ
Ga0210405_101037991	3300021171	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKGFHSRALAEIDSRPGEIDAHEFNDQVVHLRRELRQDDES
Ga0210405_114225091	3300021171	Soil	MKTEDAITILDHFACTLLPVALQMNNGNIKDAVKDSYEVALEVLKQRKAFHSRALAEIESRPGEIDAREFNDRVVHLRGESRPGEEN
Ga0210408_110770291	3300021178	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKGFHSRALAEIDSRPGEIDAHEFNDQVVHLRRELRLDDQS
Ga0210396_102878982	3300021180	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNERVVHLRREFRLDEES
Ga0210388_105534711	3300021181	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRVVHLPRELHAGEES
Ga0213873_100535842	3300021358	Rhizosphere	MKTEDAVTILDHFASALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEGRSGRLDAAEFNERIVHSSDDPRPGEDR
Ga0213873_101056442	3300021358	Rhizosphere	MKTQDAITILDHFACTLLPVALQMNNGNMKDAVTDSYEVALEVLKQRQNFHTRALHELEDRAGKLDAAEFNDRVVRSSENLRAGEERS
Ga0213872_100018027	3300021361	Rhizosphere	MKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQGFHTRALNELEARAGRLDAAEFNERIVHSSGDPRPDEERS
Ga0213872_100430892	3300021361	Rhizosphere	MKTDDAITILDHFACALLPVALQMNNGNMKDAVKDSYEVALEVLRQRGNFHAQALEESGNRAEQIDAEVFNNQVVRGRGESRFGGQ
Ga0213872_100774732	3300021361	Rhizosphere	MKTQDAITILDHFACTLLPVALQMNNGNMKDAVTDSYEVALEVLKQRQNFHTRALHELEAHAGRLDAAEFNDRVVRSSENLRAGEERS
Ga0213877_100876022	3300021372	Bulk Soil	MKTDDAITILDHFACALLPVALQMNNGNMKDAVKDSYEVALEVLRQRANFHARALEESGNRAEQIDAGVFNERVVRGRGESLFGEQNQPEQQNF
Ga0213877_101248241	3300021372	Bulk Soil	MKTQDAITILDHFACTLLPVALQMNNGNMKDAVTDSYEVALEVLRQRQNFHTRALNELEARAGRLDAAEFNDRMVRSTENLRVGEARS
Ga0213874_101464802	3300021377	Plant Roots	ILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDTQPGQIDAREFNDRVVHLRGEYPPGEEDCAPSP
Ga0213875_101377252	3300021388	Plant Roots	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDTQPGQINAREFNDRVVHLRGEYPPGEEDCAPSP
Ga0210385_102079051	3300021402	Soil	VITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHSRALEEIESWPGEIDAHKFNDRVVHLPRELHPGEES
Ga0210387_102660922	3300021405	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNECVVHLRREFIPGEES
Ga0210387_103520161	3300021405	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRVVHL
Ga0210383_102888202	3300021407	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNERVVHLRREFLPGEES
Ga0210394_104209481	3300021420	Soil	MKTDDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKDFHSRALEEIETWPREIDAHKFNDRV
Ga0210394_104745102	3300021420	Soil	MKTEDAITILDHFACTLLPIAWQMNNGNMKEAVRDSYEVALEVLKQRKSFHSRALAEVDSRPGEIDAHEFNDQVVHLGRESHSDEQS
Ga0210384_117478281	3300021432	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRTGFHSRALAEIDSRPGEIDAHEFNDKVVHL
Ga0210391_112157262	3300021433	Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRAGEIDAHEFNDQVVHLRRESRPHDEN
Ga0213879_100042492	3300021439	Bulk Soil	ALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEGRSGRLDAAEFNERIVHSSDDPRPGEDR
Ga0213878_100921052	3300021444	Bulk Soil	MKTQDAITILDHFACTLLPVALQMNNGNMKDAVTDSYEVALEVLKQRQNFHTRALHELEARAGRLDAAEFNDRVVRSSENLRAGEERS
Ga0210402_114194792	3300021478	Soil	MKTEDVITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHSRALEEIESWPGEIDAHKFNDRVVHLARELHPGEES
Ga0210410_115927331	3300021479	Soil	TILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKGFHSRALAEIDSRPGEIDAHEFNDQVVHLRRELRQDDES
Ga0126371_104896471	3300021560	Tropical Forest Soil	ALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDPAEFNERIVHSSDDPRPGEER
Ga0179589_104369612	3300024288	Vadose Zone Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRKSFHSRALVEIDNRPWEIDAHEFNEQVVHLGREFRPDEQS
Ga0207665_103701303	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKTEDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDQVVHLRREFRPDDEN
Ga0209890_101111981	3300026291	Soil	VAFRHAIGCLGRAHRYTRHMKTEDAITILDHFACTLLPVTMQMNNGNMKDAVKDSYEVALEVLKQRKDFHSRALAEIDNGPGEIDAHEFNERVVYLRREIRSGEES
Ga0209332_10636702	3300027439	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNEQVVHLRREFHPGDES
Ga0209419_11261501	3300027537	Forest Soil	MKTEDAITILDHFACTLLPIALQMNNGNMKEAVKDSYEVALEVLKQRTGFHSRALAEIDSRPGEIDAHEFNDKVVHLRRELRPDDES
Ga0209217_11504902	3300027651	Forest Soil	VRSVAWCDSLVTLVVMKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKDFHSRALAEIDSGPGEIDAHEFNERVVYLRREIRSGEES
Ga0209736_10621081	3300027660	Forest Soil	VDFRHAIGCLGRTHRYTRHMKTEDAITILDHFACTLLPVTMQMNNGNMKDAVKDSYEVALEVLKQRKEFHSRALAEIDSGPGEIDAHEFNERVVYLRREIRSGEES
Ga0209626_11546772	3300027684	Forest Soil	MKTEDAITILDHFACTLLPVTMQMNNGNMKDAVKDSYEVALEVLKQRKDFHSRALAEIDSGPGEIDAHEFNERV
Ga0209040_102526181	3300027824	Bog Forest Soil	TQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRSEEVDADAFNDRVVYLRGRSNRES
Ga0209040_103392932	3300027824	Bog Forest Soil	TQDAITILDHFACALLPVALQMNNGNLKDAVKDSYEGALEVLRQRPSFHARAVEESGSRTEEVDADAFNDRVVHLRGRSSRES
Ga0209465_106062832	3300027874	Tropical Forest Soil	MKTEDAVTILDHFAWALLPVALQMNNGNMKDAVTDSYEMALEVLKQRQSFHTRALHELEAGAGRLDAAEFNERIVHSSDDPRPGEER
Ga0209006_100463091	3300027908	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKVFHSRALSEIENWPGEIDAHEFNDRVVHLGREIPPGGDN
Ga0209006_103230682	3300027908	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHNRALTEIESRAGEIEAHEFNDRVVRLRTEFRSGEES
Ga0209006_103436952	3300027908	Forest Soil	MKTEDAITLLDHFACTLLPVALQMNNGNTKDAVKDSYEVALEVLKQRKAFHGRALAEIESRPGEIDAHEFNDRVAHLRREFRPGEES
Ga0209526_101376662	3300028047	Forest Soil	MKTPDVVTVLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLKQRKGFHSRALSEMKIGETEVDAASFNELIGRAAGYLRYDEK
Ga0209526_105465101	3300028047	Forest Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDRVLHLGSEYRPGEED
Ga0268266_112726302	3300028379	Switchgrass Rhizosphere	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKAFHSRALVEIDSRPGEIDAHEFNERVVHLRREYHPGEES
Ga0302224_100987862	3300028759	Palsa	MKTQDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDQVVHLRREFRPDDEN
Ga0302222_104193531	3300028798	Palsa	MKTQDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDQVVH
Ga0308309_106552672	3300028906	Soil	MKTLDGITILDYFACALLPVSLQMNNGKMKVAVTKSYGCALEVLRQRKSFHNRALERSESPAGPQDAAMFNERIVRPREDPAWGEE
Ga0308309_108341292	3300028906	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDALEFNERVVHL
Ga0308309_117146742	3300028906	Soil	MKTEDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEGALEVLRQRKGFHNRALTEIESRAGEIEAHEFNDRVVRLRTEFRSDEES
Ga0311339_112277961	3300029999	Palsa	MKTEDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRRSFHSRALAEIDNRPGEIDAHEFNDQVVHLRREFRPDDEN
Ga0311356_101373191	3300030617	Palsa	RLMKTQDAITILDHFACTLLPIALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALAEIDSRPGEIDAHEFNDQVVHLRREFRPDDEN
Ga0310915_101616562	3300031573	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALTELKIGEREIDAASFNEQIGRAAGYLRDNEE
Ga0310686_1043574502	3300031708	Soil	MKTHDAITILDHFACALLPVALQMNNGNMRGAVKDSYEGALEVLRQRAGFHARAVGESQSWSGEVDPAAFNDRVVRLRRSSGEES
Ga0307475_115880202	3300031754	Hardwood Forest Soil	MKTQDVITVLDHFACALLPVALQMNNGNMRDAVTDSYEGALEVLKQRKSFHSRALEEIDVRLGELDAQKFNERIVLLRRGSEAGEEQH
Ga0310917_101289862	3300031833	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALMELKIGEREIDAASFNEQIGRATGYLHDGTLVSP
Ga0306925_108029611	3300031890	Soil	DVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRATGYLHDNEE
Ga0306925_118353222	3300031890	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRATGYLHDNEE
Ga0310910_107069661	3300031946	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALMELKIGEREIDAASFNEQIGRATGYL
Ga0310909_116435271	3300031947	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALMELKIGEREIDAASFNEQIGRATGYLHDG
Ga0306926_120540872	3300031954	Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRAAGYLHDEEE
Ga0307479_105697432	3300031962	Hardwood Forest Soil	MKTQDVITVLDHFACALLPVALQMNNGNMRDAVTDSYEGALEVLKQRKSFHSRALEEIDVRLGELDAQKFN
Ga0311301_100971123	3300032160	Peatlands Soil	MKTDDAITILDHFACTLLPVALQMNNGNMKDAVKDSYEVALEVLKQRKSFHSRALVEIDSRPAEIDAYEFNDRVVHLRREFRPGEES
Ga0307471_1023749611	3300032180	Hardwood Forest Soil	MKTLDVVTALDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKSFHSRALIELKIGEREIDAASFNEQIGRATGYLHDGTLVSS
Ga0307471_1029986172	3300032180	Hardwood Forest Soil	MKTLVVITPLDHFACALLPVALQMNNGNMKDAVTDSYEGALEVLRQRKGFHSRALIELKVGEREIDAASFNEQIGRAAGYLHDDEG
Ga0335081_108098391	3300032892	Soil	KTDDAITILDHFACALLPVALQMNNGNMKDAVKDSYEVALEVLRQRANFHARALEESGNRAEQIDAGVFNERVVRGRGESLFGEQNQPEQ
Ga0335076_103579131	3300032955	Soil	MKTDDAITILDHFACALLPVALQMNNGNMKDAVKDSYEVALEVLRQRANFHARALEESGNRAEQIDAGVFNERVVRGRGESLFGEQNQPEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences