Metagenome Family F061073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061073
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	89 residues
Representative Sequence	MTTTRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAG
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.97 %
% of genes near scaffold ends (potentially truncated)	18.18 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.424 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (6.061 % of family members)
Environment Ontology (ENVO)	Unclassified (32.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.79% β-sheet: 11.50% Coil/Unstructured: 40.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
c.37.1.20: Extended AAA-ATPase domain	d2fnaa2	2fna	0.60514
a.6.1.3: DNA-binding N-terminal domain of transcription activators	d1q06a_	1q06	0.60349
a.6.1.0: automated matches	d4ua1a_	4ua1	0.58968
a.6.1.3: DNA-binding N-terminal domain of transcription activators	d1r8da_	1r8d	0.58413
c.1.4.0: automated matches	d3sr7a_	3sr7	0.58303

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01556	DnaJ_C	35.61
PF00990	GGDEF	15.15
PF13591	MerR_2	12.88
PF13185	GAF_2	4.55
PF00570	HRDC	3.79
PF01207	Dus	3.79
PF09413	DUF2007	2.27
PF09382	RQC	1.52
PF07884	VKOR	1.52
PF09922	DUF2154	1.52
PF00702	Hydrolase	0.76
PF08768	THAP4_heme-bd	0.76
PF00069	Pkinase	0.76
PF13230	GATase_4	0.76
PF01272	GreA_GreB	0.76
PF00239	Resolvase	0.76
PF08668	HDOD	0.76
PF00486	Trans_reg_C	0.76
PF03104	DNA_pol_B_exo1	0.76
PF16124	RecQ_Zn_bind	0.76
PF00078	RVT_1	0.76
PF00092	VWA	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	35.61
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	3.79
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.03
COG4243	Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formation	General function prediction only [R]	1.52
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	0.76
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.76
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.42 %
Unclassified	root	N/A	7.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.42 %
Unclassified	root	N/A	7.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.42 %
Unclassified	root	N/A	7.58 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	75.00 %
Unclassified	root	N/A	7.58 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	56.82 %
Unclassified	root	N/A	7.58 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	56.82 %
Unclassified	root	N/A	7.58 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	27.27 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11.36 %
Unclassified	root	N/A	7.58 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	27.27 %
Unclassified	root	N/A	7.58 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.52 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.52 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	27.27 %
Unclassified	root	N/A	7.58 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.52 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.52 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003321\|soilH1_10060818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4340	Open in IMG/M
3300005258\|Ga0074071_1000486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	14372	Open in IMG/M
3300005330\|Ga0070690_100249466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1255	Open in IMG/M
3300005332\|Ga0066388_100792383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1541	Open in IMG/M
3300005332\|Ga0066388_101361615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300005332\|Ga0066388_108332560	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005334\|Ga0068869_100043088	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300005334\|Ga0068869_100268158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1369	Open in IMG/M
3300005334\|Ga0068869_101812702	Not Available	546	Open in IMG/M
3300005343\|Ga0070687_101270080	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300005441\|Ga0070700_100197536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300005458\|Ga0070681_11499202	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005459\|Ga0068867_101083042	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005467\|Ga0070706_101478445	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005615\|Ga0070702_100996872	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005764\|Ga0066903_105004901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300005842\|Ga0068858_101422805	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005842\|Ga0068858_102473730	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300005843\|Ga0068860_100629602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300005937\|Ga0081455_10109045	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300005944\|Ga0066788_10101232	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300005995\|Ga0066790_10518760	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300006028\|Ga0070717_10055665	All Organisms → cellular organisms → Bacteria → Proteobacteria	3264	Open in IMG/M
3300006046\|Ga0066652_100837498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300006046\|Ga0066652_101037921	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300006176\|Ga0070765_101189676	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300006177\|Ga0075362_10264433	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300006755\|Ga0079222_10322405	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006755\|Ga0079222_11367141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300006854\|Ga0075425_100158045	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300006854\|Ga0075425_100888523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1019	Open in IMG/M
3300006865\|Ga0073934_10756329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M
3300006871\|Ga0075434_100380035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300006903\|Ga0075426_10806851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300006904\|Ga0075424_100653300	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300007521\|Ga0105044_10027218	All Organisms → cellular organisms → Bacteria → Proteobacteria	7480	Open in IMG/M
3300009098\|Ga0105245_10000042	All Organisms → cellular organisms → Bacteria	140677	Open in IMG/M
3300009792\|Ga0126374_10129051	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300009792\|Ga0126374_11489522	Not Available	555	Open in IMG/M
3300009868\|Ga0130016_10005892	All Organisms → cellular organisms → Bacteria	26292	Open in IMG/M
3300010043\|Ga0126380_11382550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300010046\|Ga0126384_10767399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	860	Open in IMG/M
3300010047\|Ga0126382_11440430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300010358\|Ga0126370_10418859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1106	Open in IMG/M
3300010359\|Ga0126376_10629181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1020	Open in IMG/M
3300010371\|Ga0134125_10527143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1307	Open in IMG/M
3300010398\|Ga0126383_13182650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300010399\|Ga0134127_10020251	All Organisms → cellular organisms → Bacteria → Proteobacteria	5143	Open in IMG/M
3300010399\|Ga0134127_11180883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	831	Open in IMG/M
3300010400\|Ga0134122_10206685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1632	Open in IMG/M
3300010400\|Ga0134122_11386667	Not Available	716	Open in IMG/M
3300010401\|Ga0134121_10013251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6549	Open in IMG/M
3300010401\|Ga0134121_11811551	Not Available	637	Open in IMG/M
3300010403\|Ga0134123_11002100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300011428\|Ga0137456_1051794	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300011431\|Ga0137438_1004709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3776	Open in IMG/M
3300011438\|Ga0137451_1007362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3221	Open in IMG/M
3300011438\|Ga0137451_1179925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	668	Open in IMG/M
3300011442\|Ga0137437_1000334	All Organisms → cellular organisms → Bacteria → Proteobacteria	13984	Open in IMG/M
3300011442\|Ga0137437_1058609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1315	Open in IMG/M
3300012228\|Ga0137459_1008762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2804	Open in IMG/M
3300012228\|Ga0137459_1016984	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300012929\|Ga0137404_11103059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300012944\|Ga0137410_10588846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300012964\|Ga0153916_10034922	All Organisms → cellular organisms → Bacteria → Proteobacteria	4413	Open in IMG/M
3300013297\|Ga0157378_11990577	Not Available	631	Open in IMG/M
3300014325\|Ga0163163_10113234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2743	Open in IMG/M
3300014325\|Ga0163163_13224044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300014502\|Ga0182021_10370223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1696	Open in IMG/M
3300014968\|Ga0157379_12110141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300014969\|Ga0157376_10051977	All Organisms → cellular organisms → Bacteria	3405	Open in IMG/M
3300014969\|Ga0157376_11696740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300018432\|Ga0190275_10211384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1843	Open in IMG/M
3300018466\|Ga0190268_12330310	Not Available	506	Open in IMG/M
3300018920\|Ga0190273_11697480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	570	Open in IMG/M
3300019890\|Ga0193728_1051202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2006	Open in IMG/M
3300020061\|Ga0193716_1066372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1635	Open in IMG/M
3300021082\|Ga0210380_10397884	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300021362\|Ga0213882_10010729	All Organisms → cellular organisms → Bacteria → Proteobacteria	3318	Open in IMG/M
3300021377\|Ga0213874_10363056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	557	Open in IMG/M
3300024288\|Ga0179589_10224571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	828	Open in IMG/M
3300025310\|Ga0209172_10503993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	556	Open in IMG/M
3300025878\|Ga0209584_10129603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	943	Open in IMG/M
3300025918\|Ga0207662_10083211	All Organisms → cellular organisms → Bacteria → Proteobacteria	1956	Open in IMG/M
3300025918\|Ga0207662_10294674	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300025918\|Ga0207662_10580235	Not Available	779	Open in IMG/M
3300025927\|Ga0207687_10000043	All Organisms → cellular organisms → Bacteria → Proteobacteria	106920	Open in IMG/M
3300025927\|Ga0207687_10241261	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300025936\|Ga0207670_11720543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300025938\|Ga0207704_10579285	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300026023\|Ga0207677_10407921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1154	Open in IMG/M
3300026035\|Ga0207703_10827885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300026075\|Ga0207708_10308950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300026075\|Ga0207708_10363557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300026088\|Ga0207641_11301911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	727	Open in IMG/M
3300027787\|Ga0209074_10397085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300027823\|Ga0209490_10013559	All Organisms → cellular organisms → Bacteria → Proteobacteria	6977	Open in IMG/M
3300028380\|Ga0268265_10081159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2560	Open in IMG/M
3300028380\|Ga0268265_10295275	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300028381\|Ga0268264_10498947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1187	Open in IMG/M
3300028536\|Ga0137415_11083029	Not Available	614	Open in IMG/M
3300028794\|Ga0307515_10023077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10931	Open in IMG/M
3300028802\|Ga0307503_10056796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1519	Open in IMG/M
3300030294\|Ga0311349_10756386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	916	Open in IMG/M
3300030294\|Ga0311349_11673966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	588	Open in IMG/M
3300030521\|Ga0307511_10191914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1078	Open in IMG/M
3300031200\|Ga0307496_10041165	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031232\|Ga0302323_100173214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2161	Open in IMG/M
3300031238\|Ga0265332_10001034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	16378	Open in IMG/M
3300031507\|Ga0307509_10053285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4315	Open in IMG/M
3300031507\|Ga0307509_10230737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1654	Open in IMG/M
3300031616\|Ga0307508_10017788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6466	Open in IMG/M
3300031711\|Ga0265314_10372645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300031715\|Ga0307476_10003668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9196	Open in IMG/M
3300031720\|Ga0307469_10214935	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300031726\|Ga0302321_101243527	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300031902\|Ga0302322_100163869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2395	Open in IMG/M
3300031902\|Ga0302322_101715900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	769	Open in IMG/M
3300031918\|Ga0311367_11171148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	764	Open in IMG/M
3300031938\|Ga0308175_101240053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	830	Open in IMG/M
3300031938\|Ga0308175_102470723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	582	Open in IMG/M
3300031939\|Ga0308174_11758716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300032180\|Ga0307471_100938937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1032	Open in IMG/M
3300032205\|Ga0307472_102362752	Not Available	539	Open in IMG/M
3300032893\|Ga0335069_10310336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1875	Open in IMG/M
3300032955\|Ga0335076_10702838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300033179\|Ga0307507_10537070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	620	Open in IMG/M
3300033412\|Ga0310810_10089147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3700	Open in IMG/M
3300033487\|Ga0316630_12004709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	532	Open in IMG/M
3300034194\|Ga0370499_0028336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1306	Open in IMG/M
3300034268\|Ga0372943_0109184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.70%
Host-Associated	Host-Associated	29.55%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.09%
Plants	Host-Associated → Plants	29.55%
Aquatic	Environmental → Aquatic	10.61%
Wastewater	Engineered → Wastewater	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.61%
Roots	Host-Associated → Plants → Roots	7.58%
Sediment	Environmental → Aquatic → Sediment	6.06%
Peat	Environmental → Terrestrial → Peat	5.30%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.52%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Loam	Environmental → Terrestrial → Soil → Loam	14.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.30%
Ice	Environmental → Aquatic → Freshwater → Ice	1.52%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.27%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.52%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.06%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.55%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.52%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300005258	Microbial communities on the surface of bentonite enhanced biochar	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH1_100608185	3300003321	Sugarcane Root And Bulk Soil	VTRYTYQHLLELVEGDDELITLLVEEGEIVRGDDDVVTVDVERVLVARTLLRELEVSWPGIEIILRLRAELAEARKRLAERDQ*
Ga0074071_100048610	3300005258	Soil	VTRYTYQHLLELVDGDHELIALLVEEGEIVRGDDDVVTVDVERVLVARTLLREFEVSWPGIEIILRLRAELAEARKRLAERDQ*
Ga0070690_1002494662	3300005330	Switchgrass Rhizosphere	VTAARFTYRLLVELVGGDDDLIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEASGRERQDG*
Ga0066388_1007923833	3300005332	Tropical Forest Soil	MTARFTYQRLVELVDGDAELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIPIILRLRAELAAARGRIAELEASLGGRDRR*
Ga0066388_1013616152	3300005332	Tropical Forest Soil	MTAARFTYQHLVELVDQDHELIAQLVEDGVIEVRDDDRVIVDIDSVLAARTLRELDVDWSGIAIILRLRGELAAARRRIAELEASLTRRSD*
Ga0066388_1083325601	3300005332	Tropical Forest Soil	MTTSRFTYQRLVELVDDDHELIARLIEDGVIEVRSDDRVLVDVDSVLAARTLRELEVDWSGIAIILRLRGELAAARRRIEELEAGLR*
Ga0068869_1000430883	3300005334	Miscanthus Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS*
Ga0068869_1002681582	3300005334	Miscanthus Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDVDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER*
Ga0068869_1018127021	3300005334	Miscanthus Rhizosphere	RGVGAVTAARFTYRLLVELVGGDDDLIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR*
Ga0070687_1012700802	3300005343	Switchgrass Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEDGVIEVRDDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEGPADR*
Ga0070700_1001975361	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTARFTYQRLVELVDDDHELIARLVEEGVIEARDDDRAVVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEATDERSR*
Ga0070681_114992022	3300005458	Corn Rhizosphere	MTRFTYRQLAGLIGDDDELIAWLVDEGVIEIGSNDRALVDIDSVLAARTLRELEVDWSGIAIILRLRGELAEARRQIAELTAKLEGEHHRG*
Ga0068867_1010830422	3300005459	Miscanthus Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER*
Ga0070706_1014784452	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS*
Ga0070702_1009968722	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEDGVIEVRDDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEGPADR*
Ga0066903_1041350602	3300005764	Tropical Forest Soil	MTRVTYAALVTLVDGDVDLIEHLVEEGLIERRGDDRALVDVDRVLVARTLWRELEVEWPGIEVILRLRDELLEARRRIGELERALEDRQKA*
Ga0066903_1050049011	3300005764	Tropical Forest Soil	MTTARFTYQRLVELVDGDAELIAWLVDEGVIERRDDDRVTVDVDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEAGTEPPEH*
Ga0068858_1014228052	3300005842	Switchgrass Rhizosphere	VTRYTYQHLLELVDGDHELIARLVEVGEIVRRDDGDIVSVDVERVLVARTLYRELEVDLNGIEVILRLRDELTAARRRIAELEAKSGM*
Ga0068858_1024737302	3300005842	Switchgrass Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEKGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS
Ga0068860_1006296022	3300005843	Switchgrass Rhizosphere	MTGARFTYRRLVELVDGDDELIVHLIDEGVIEACGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEASGEREDG*
Ga0081455_101090451	3300005937	Tabebuia Heterophylla Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEDGVIEVRDDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGQ
Ga0066788_101012322	3300005944	Soil	MSRYTYQHLVELLDGDNELIARLVEEGEIVQRDDDVVLVDVDRVLLARTLLRELEVDWPGVEIILRMRDDLVAARRRIAELEKK*
Ga0066790_105187602	3300005995	Soil	MSRYTYQHLVELLDGDNELIARLVEEGEIVQRDDDVVVVDVDRVLLARTLLRELEVDWPGVEIILRMRDDLVAARRRIAELEKE*
Ga0070717_100556653	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTEARFTYQRLVALVGDDHELIAQLVEEGVIEEADGDRVLVDVDSVLAAQTLRELEVDWSGIAIILRLRDELAQARRRIAELEAALAARRP*
Ga0066652_1008374982	3300006046	Soil	MTAARFTYRRLVELVDGDDELIVHLVEEGVIEPCGDDRVTVDVDSVLAARTLRELDVDWSGIPIILRLRAELAIARRRIAELEAAAAGDR*
Ga0066652_1010379212	3300006046	Soil	MTRFTYRHLVELVEGDHALIERLIDEGLIERRADDRVIVDVDVVLVARTLWRDLEIEWAGIEVILRLRDELAAARRRIAELEAALSAREPDPR*
Ga0070765_1011896761	3300006176	Soil	MSRYTYQHLVELVDGDHELIARLVEEGVIEYEDDGVVPVDPDMVVLARTLWRELDVDWNGIPIIIRLTAQLAAARRRIAELERKRG*
Ga0075362_102644332	3300006177	Populus Endosphere	MTAARFTYQHLVELVDDDHELIARLVEEGVIEERDDDRVSVDVDSVLAARTLRELEVDWSGIAIILRLISELGAARRRIAELEAGGR*
Ga0079222_103224052	3300006755	Agricultural Soil	MTTARFTYQRLVELVDGDAELIGWLVDEGVIEQRDDDRVAVDVDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEADEPTKH*
Ga0079222_113671411	3300006755	Agricultural Soil	VTAARFTYRRLVELVGGDDDLIVRLVDEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR*
Ga0075425_1001580453	3300006854	Populus Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS*
Ga0075425_1008885232	3300006854	Populus Rhizosphere	MTTRFTYQRLVELVDGDDELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIPIILRLRAELAAARRRIAELEADEPKH*
Ga0073934_107563292	3300006865	Hot Spring Sediment	MTTRFTYQQLLALVEGDQELIANLVEQGIIERRDDDRVVVDVDRVLVARTLWRDLELDWAAIDVILRLRDQLVEARRRIAELEARLGRG*
Ga0075434_1003800352	3300006871	Populus Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRVVVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELETARGGRQS*
Ga0075426_108068511	3300006903	Populus Rhizosphere	MTTRFTYQRLVELVDGDDELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIPIILRLRAELAAARRRIAELEADEPK
Ga0075424_1006533002	3300006904	Populus Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRVVVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELETARGGRQS*
Ga0105044_100272186	3300007521	Freshwater	MSTNRFTYQRLVDLVDGDHELIARLVEEGVIERRADDVAIVDVDRVLVVRTLWRELELDWPAIEIVLRLGDELTTARARIAELERTLELDK*
Ga0105245_1000004259	3300009098	Miscanthus Rhizosphere	MTRYTYQHLLELVDGDHELIARLVEVGEIVRRDDGDIVSVDVERVLVARTLYRELEVDLNGIEVILRLRDELSAARRRIAELEAKSGM*
Ga0126374_101290512	3300009792	Tropical Forest Soil	VTAARFTYRRLVELVGGDDDLIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR*
Ga0126374_114895223	3300009792	Tropical Forest Soil	EMVDGDAELIAWLVDEGVIERHDDDHVTVDIDSVLAARTLRELDVDWSGIPIILRLRAELAVARRRIAELEAAGKR*
Ga0130016_1000589217	3300009868	Wastewater	VTRYTYQQLLELVEGDHELIALLVEEGEIVRSEDDFVTVDIERVLVARTLLRDLDVTWPGIEIILRLRSELAAARKRLADLDQT*
Ga0126380_113825502	3300010043	Tropical Forest Soil	MTAARFTYRRLVELVEGDDELIVQLVDEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAATDPDPDR*
Ga0126384_107673992	3300010046	Tropical Forest Soil	VTAARFTYRRLVELVGGDDDLIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELAIARRRIAELEAAAGREP*
Ga0126382_114404302	3300010047	Tropical Forest Soil	MSRYTYAQLVELVDGDHELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEADEPEH*
Ga0126370_104188591	3300010358	Tropical Forest Soil	VTARFTYQRLVELVDGDAELIAWLVDEGVIERHDDDHVTVDIDSVLAARTLRELDVDWSGIPIILRLRAELAAARLRIAELEAAAEPPKH*
Ga0126376_106291812	3300010359	Tropical Forest Soil	VTAARFTYRRLVELVGGDDELIVHLVDEGVIEPCGDDRVTVDIDSVLAARTLRELDVDWSGIPIILRLRAELAVARRRIAELEAAGKR*
Ga0134125_105271432	3300010371	Terrestrial Soil	VTRYTYQHLLELVDGDDELIALLVEEGEIVRGDDDVVQVDVERVLVARTLLRELEVSWPGIEIVLRLRGELLRLRAELAEARKRLAERGQ*
Ga0126383_131826502	3300010398	Tropical Forest Soil	MTTARFTYQRLVELVDGDAELIAWLVDEGVIERHDDDHVTVDIDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEAAAEPTKH*
Ga0134127_100202515	3300010399	Terrestrial Soil	MTAARFTYQRLVELVDDDHELIARLVEEGVIEVRDDDRVVVDVDSVLAARTLRELEVDWSGIAIILRLRDELARARRRIAELEATSRR*
Ga0134127_111808832	3300010399	Terrestrial Soil	MKASRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS*
Ga0134122_102066853	3300010400	Terrestrial Soil	MTARFTYQRLVELVDGDAELIAWLVDEGVIEQRDDDHVAVDVDSVFAARTLRELEVDWSGIPIILRLRAELAAARRRIAELEADEPKH*
Ga0134122_113866671	3300010400	Terrestrial Soil	RTRVVVAVTAARFTYPLRVELVGGDDDLIVHLVDGGVIKPGGYDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR*
Ga0134121_100132517	3300010401	Terrestrial Soil	MTTSRFTYQRLVELVDNDHELIAQLVEEGVIEQLTGDDRGDDRVLVDIDSVLAARTLRDLEVDWSGIAIILRLRAELADARRRIAELEAALSNSSSTGDR*
Ga0134121_118115511	3300010401	Terrestrial Soil	RLVELVDGDDELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIPIILRLRAELAAARRRIAELEADEPTEH*
Ga0134123_110021002	3300010403	Terrestrial Soil	VTAARFTYRRLVELVGGDDELIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEASGERQDGQDG*
Ga0137456_10517941	3300011428	Soil	MTTSRFTYQRLVELVDNDHELIAQLVEEGVIEHPSGGRADDLGDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRGELAAARRRIAELEAALESSTPTGDR*
Ga0137438_10047094	3300011431	Soil	MTATRFTYQRLVALVDDDHELIAQLVEDGVIEVRDDDSALVDVDSVLAARTLRELEVDWSGIAIILRLRDELAEARRRIAELEAPLAPRGP*
Ga0137451_10073622	3300011438	Soil	VTGARFTYQRLVELVDDDHELIAQLVEDGVIEQRDGDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAALAAHGG*
Ga0137451_11799252	3300011438	Soil	VTAHRFTYQRLVELVDNDHELIAQLVEEGVIEERDGDRVMVDVDSVLAARTLRELEVDWSGIAIILRLRDELAQARRRIAELEAALATREP*
Ga0137437_10003342	3300011442	Soil	VTGARFTYQRLVELVDDDHELIAQLVEDGVIEQRDGDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELARARRRIAELEAALAAHGG*
Ga0137437_10586091	3300011442	Soil	TARFTYQRLVELVDGDDELIGWLVDEGVIEHRGDDRVSVDLDGVLAARTLRELEVDWSGIPIILRLREELAAARRRIAELEAAPPAPPGPGS*
Ga0137459_10087622	3300012228	Soil	MTAARFTYERLVELVDDDHELIAQLVEDGVIEQRDGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAALAAHGG*
Ga0137459_10169843	3300012228	Soil	MTAARYTYQHLVELVDDDHELIAWLVEEGVIEERDDDRVVVDVDSVLAARTLRELEVDWSGIAIILRLRGELAEARRRVAELEAAVAPRDV*
Ga0137404_111030591	3300012929	Vadose Zone Soil	VTARLTYRHLVELVGDDELVAWLVDEGVIEQRDDDQVTVDVDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEADDPTEH*
Ga0137410_105888462	3300012944	Vadose Zone Soil	VTAARFTYRRLVELVGGDDDLIVRLVDEGVIEPCGEDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELAIARRRIAELEAASDR*
Ga0153916_100349226	3300012964	Freshwater Wetlands	MTRYTYRQLIELVEGDDELIAHLLEEGIIERGDDDRAIVDVDNVLVARTLWRDLEVEWSGIALILRLRAELAAARERIAELEAELAKR*
Ga0157378_119905772	3300013297	Miscanthus Rhizosphere	MTSTRFTYERLVALVDADHELIAHLVDDGVLEERDGDRAVVDVDSVMAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER*
Ga0163163_101132342	3300014325	Switchgrass Rhizosphere	MTRFTYRHLVELAGDDELIAWLVDEGVIEIGSNDRALVDIDSVLAARTLRELEVDWSGIAIILRLRGELAEARRQIAELTAKLEGEHHRG*
Ga0163163_132240441	3300014325	Switchgrass Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEATLANRK
Ga0182021_103702233	3300014502	Fen	MSRYTYQHLVELLDGDNELIARLVEEGEIVQRDDDVVVVDVDRVLLARTLLRELEVDWPGVEIILRLRDDLLAARRRIAELEKK*
Ga0157379_121101412	3300014968	Switchgrass Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRE
Ga0157376_100519774	3300014969	Miscanthus Rhizosphere	MTRYTYQHLLELVDGDHELIARLVEVGEIVRRDDGDIVSVDVERVLVARTLYRELEVDLNGIEVILRLRDELAAARRRIAELEDKSGM*
Ga0157376_116967401	3300014969	Miscanthus Rhizosphere	VTAERFTYRRLVELVGGDDELIVHLVDEGVIEPCGDDRVSVDVDSVLAARTLRELDVDWSGIPIILRLVAELASARRRIAELEATTDREG*
Ga0190275_102113842	3300018432	Soil	VTAARFTYAHLVELVEGDDELIVRLVDEGLIERRDDDRVLVDVDAVLVARTLWRDLDIEWPGIEVILRMRDELAAARRRILELEDKLSAKG
Ga0190268_123303102	3300018466	Soil	MKPSRFTYQRLVELVDDDHELIAQLVEEGVIEVRGDDRVIVDVDSVLAARTLRELEVDWSGIAIILRLRTELAAARRRIAELEARGRSS
Ga0190273_116974801	3300018920	Soil	MTGFTYQRLVELVEGDHDLIDRLVDEGVIERRDNDRVIVDVDVVLVARTLWRDLEVEWPGIEVILRLRDDLVRARRRIAELEAQLCQSESR
Ga0193728_10512023	3300019890	Soil	MTRFTYQHLLELVEGDQELIARLVEEGEIVRRDDGDVVTLDVERVLVARTLYRELEVDWAGIEVILRLRDELAARACE
Ga0193716_10663722	3300020061	Soil	MSRYTYQHLVELLDGDNELIARLVEEGEIVQRDDDVVLVDVDRVLLARTLLRELEVDWPGVEIILRMRDDLVAARRRIAELEKK
Ga0210380_103978841	3300021082	Groundwater Sediment	FTYQRLVELVDDDHELIAQLVEDGVIEQRDGDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAALAAHGG
Ga0213882_100107295	3300021362	Exposed Rock	VTRYTYQHLLELVDGDHELITLLVEEGEIVRGDNDVVTVNVEHVLVARTLLRDLDVSWPGIEIILRLRRELAEARKRLAERDQ
Ga0213874_103630562	3300021377	Plant Roots	MTRFTYQHLVELVEGDDELIAKLVEIGVIERADGDIVRVDVEHVMIARTLIRDLEIDGPAIDVILRLRDELARARRRIAELEQE
Ga0179589_102245711	3300024288	Vadose Zone Soil	WLVGLVGGDDELIVYLVDEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELAIARRRIAELEAASDRDR
Ga0209172_105039932	3300025310	Hot Spring Sediment	MTTRFTYQQLLALVEGDQELIANLVEQGIIERRDDDRVVVDVDRVLVARTLWRDLELDWAAIDVILRLRDQLVEARRRIAELEARLGRG
Ga0209584_101296032	3300025878	Arctic Peat Soil	MSRYTYQHLVELLDGDNELIARLVEEGEIVQRGDDVVLVDVDRVLLARTLVRELEVDWPGVEIILRMRDDLVAARRRIAELEKK
Ga0207662_100832112	3300025918	Switchgrass Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGRGGRQS
Ga0207662_102946742	3300025918	Switchgrass Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEDGVIEVRDDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAGSARDP
Ga0207662_105802351	3300025918	Switchgrass Rhizosphere	ARAMTTRFTYQRLVELVDGDDELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIPIILRLRAELAAARRRIAELEADEPKH
Ga0207687_1000004376	3300025927	Miscanthus Rhizosphere	MTRYTYQHLLELVDGDHELIARLVEVGEIVRRDDGDIVSVDVERVLVARTLYRELEVDLNGIEVILRLRDELSAARRRIAELEAKSGM
Ga0207687_102412612	3300025927	Miscanthus Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDVDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER
Ga0207670_117205432	3300025936	Switchgrass Rhizosphere	MTTTRFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRATVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAG
Ga0207704_105792852	3300025938	Miscanthus Rhizosphere	MTARFTYRRLVELVDGDDELIVHLVDEGVIEPCGDDRVTVDVDGVLAAQTLRELEVDWSGIPIILRLRAELAIARRRIAELEASGRGRQDR
Ga0207677_104079212	3300026023	Miscanthus Rhizosphere	VTAARFTYRRLVELVGGDDELIVRLVDEGVIESCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELASARRRIAELEETTDPERSRR
Ga0207703_108278852	3300026035	Switchgrass Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR
Ga0207708_103089501	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTARFTYQRLVELVDDDHELIARLVEEGVIEARDDDRAVVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEATDERSR
Ga0207708_103635572	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTATRFTYQRLVELVDDDHELIARLVEDGVIEVRDDDRVLVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEGPADR
Ga0207641_113019111	3300026088	Switchgrass Rhizosphere	RFTYQRLVELVDDDHELIARLVEEGVIEVRDGDRVVVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER
Ga0209074_103970851	3300027787	Agricultural Soil	VTAARFTYRRLVELVGGDDDLIVRLVDEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR
Ga0209490_100135598	3300027823	Freshwater	MSTNRFTYQRLVDLVDGDHELIARLVEEGVIERRADDVAIVDVDRVLVVRTLWRELELDWPAIEIVLRLGDELTTARARIAELERTLELDK
Ga0268265_100811592	3300028380	Switchgrass Rhizosphere	MTVVRYTYRQLIDLVEGDDELIAQLIEEGVIEERAGDRALVDIDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELEAAATGRER
Ga0268265_102952752	3300028380	Switchgrass Rhizosphere	MTTTRFSYQRLVELVDNDHELIEHLVEEGVIEHGAGDRGDDRVVVDIDSVLAAQTLRELEVDWSGIAIILRLRDELARARRRISELEAALAARAP
Ga0268264_104989472	3300028381	Switchgrass Rhizosphere	MTGARFTYRRLVELVDGDDELIVHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEASGEREDG
Ga0137415_110830292	3300028536	Vadose Zone Soil	LVDDDHELIARLLEDGVIEVRDHDRVLVDVDSVLAARTLRELDVDWSGIAIILRLRDELAAARRRIAELEASLARDEQRR
Ga0307515_1002307711	3300028794	Ectomycorrhiza	VTAQFTYRHLTELVGDDDELVAWLVDEGVIEVGDDERALVDVDSVLAARTLRELEVDWSGIALILRLRGELADARRRIDELAAELATRRQG
Ga0307503_100567961	3300028802	Soil	MSARYSYQRLVELVGGDDELIARLVEEGEIQRLDDDVALVNIDRVLVAHTLVRSLEIDWAGVDVILRLRDELAAARRRIAELEAELKQTRS
Ga0311349_107563862	3300030294	Fen	MSRYTYQHLVELVDGDNELIARLVEEGEIVQRDDDVVVVDVDRVLLARTLLRELEVDWPGVEIILRLRDDLLAARRRIAELEKK
Ga0311349_116739662	3300030294	Fen	VTTRYTYQHLVELVDGDHELIVHLVEEGIIERRGDDTAVVDVDRVLVARTLWRELELDWSAIEIILRLRDELAAARARLAELEP
Ga0307511_101919142	3300030521	Ectomycorrhiza	LVELVDGDEELIAWLVDESVTESSTESSTDGVADHVIEARGDDRVTVDLDSVLAARTLRELDVDWSGIPIILRLRRELAEARRRIAELEAAAGPPAHRR
Ga0307496_100411652	3300031200	Soil	MTAARFTYERLVALVDNDHELIAQLVEEGVIESWSDDRPGDVVLVDVDAVLAAQTLRELEVDWSGIAIILRLRDELAAARRRIAELEAALATRDA
Ga0302323_1001732141	3300031232	Fen	ARAVTTRYTYQHLVELVDGDHELIVHLVEEGIIERRGDDTAVVDVDRVLVARTLWRELELDWSAIEIILRLRDELAAARARLAELEP
Ga0265332_100010347	3300031238	Rhizosphere	VTARFTYRRLVELVDGDDELIVYLVDEGVIESCGDDRVTVDVDSVLAARTLRELEVDWSGIPIILRLRAELALARRRIAELEAADPEDG
Ga0307509_100532854	3300031507	Ectomycorrhiza	VTARFTYRRLVELVDGDDELIGWLVDEGVIERRADDQVTVDLDCVLAARTLRELEVDWSGIPIILRLREELAAARRRIAQLEADPPATGR
Ga0307509_102307373	3300031507	Ectomycorrhiza	TARFTYQRLVELVDGDAELIAWLVDEGVIEQRDDDQVAVDVDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEADDPTEH
Ga0307508_100177882	3300031616	Ectomycorrhiza	VTAARFTYQHLVALVDDDHELIARLIDEGVIEERGDDRAMVDVDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELETALAGRDR
Ga0265314_103726451	3300031711	Rhizosphere	MTRYTYQHLLELVDGDHELIARLVEVGEIVRRDDGDIVSVDVERVLVARTLYRELEVDLNGIEVILRLRDELTAARRRIAELEAESGM
Ga0307476_100036682	3300031715	Hardwood Forest Soil	VTAARFTYQWLVELVGGDDELIVQLVEEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAATDRER
Ga0307469_102149352	3300031720	Hardwood Forest Soil	VTAARFTYRRLVELVGGDDDLIVQLVDEGVIEPCGDDRVTVDIDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAASDRDR
Ga0302321_1012435272	3300031726	Fen	MTTARLTYQRLVALVDDDHELIAQLVEDGVIELREHDRALVDVDSVLAARTLRELEVDWSGIAIILRLRDELADARRRIAALEAALAARGP
Ga0302322_1001638694	3300031902	Fen	MTTRYTYQHLVELVGGDHELIARLVEEGEIECRDEVAIVDVDRVLVAQTLVRELELEWGAVEVILRMRDELVAARRRIAELERG
Ga0302322_1017159002	3300031902	Fen	VTTRYTYQHLVELVDGDHELIVHLVEEGIIERRGDDTAVVDVDRVLVARTLWRELELDWSAIEIILRLRDALAAARARLAELEP
Ga0311367_111711482	3300031918	Fen	MTTRFTYQHLLALVEGDHELIAHLVEEGLIERRADDRVLVDVEHVLVARTLWRELDVEWPGIEVILRLRDELAEARSRIAELEAKVTASGDAR
Ga0308175_1012400532	3300031938	Soil	MTARFTYRRLVELVDGDAELIGWLVDEGVIEQRDDDRVTVDVDSVLAARTLRELDVDWSGIPIILRLRAELAAARRRIAELEADDPEPDPEH
Ga0308175_1024707232	3300031938	Soil	MTRFTYKHLLELVDGDDELIARLVEEGEIVRRDDGDIVTVDVERVLVARTLLRELEVSWPGIEIILRLRGELAEARKRLAERDQ
Ga0308174_117587161	3300031939	Soil	MSARYTYQRLVDLVGGDDELIARLVEEGEIERVDDDVAIVNVDRVLIARTLVRELDVDWSGVEVILRLQEELGEARKRIAALE
Ga0307471_1009389372	3300032180	Hardwood Forest Soil	VTAARFTYRRLVELVGGDDDLIVRLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR
Ga0307472_1023627521	3300032205	Hardwood Forest Soil	LVDGDAELIAWLVDEGVIEQRDDDRVTVDLDSVLAARTLRELEVDWSGIAIILRLRGELAAARQRIAELEGATGRNDR
Ga0335069_103103362	3300032893	Soil	MTTRFTIQALLDLVEGDREVIEHLVEEGIIEIGEDYRAVVDVDIVLVARTLWRELAIDWSGIGVILRLTSDLARARQRIAELEALVAKP
Ga0335076_107028382	3300032955	Soil	VTAARFTYRRLVELVGGDDELIIHLVDEGVIEPCGDDRVTVDVDSVLAAQTLRELEVDWSGIPIILRLRAELALARRRIAELEAAADRDR
Ga0307507_105370701	3300033179	Ectomycorrhiza	LRQAGARGVDAVTAARFTYQHLVALVDDDHELIARLIDEGVIEERGDDRAMVDVDSVLAARTLRELEVDWSGIAIILRLRDELAAARRRIAELETALAGRDR
Ga0310810_100891474	3300033412	Soil	MTRFTYARLVELVDGDDELIEHLLEENIIERTGDRVMVDVDVVLVARTLWRDLEIEWPGIPVILRLRDELSRARVRIAELEAQLSREPGAR
Ga0316630_120047091	3300033487	Soil	MTTRFTYQALVELVEGDDELLVRLVDEGLIERRDDDRVLVDIDRVLAARTLWRDLEVDWNGIEVILRMREELLHARRQIAELEQKLAAARTR
Ga0370499_0028336_314_592	3300034194	Untreated Peat Soil	MTPFTYQRLVELVEGDHDLIEHLVDEGVIERRENDRVIVDVDVVLVARTLWRDLDVEWPGIEVILRMRAELAAARRRIAELEEKLASEPDPR
Ga0372943_0109184_955_1254	3300034268	Soil	MTARFTYRHLTELVGGDDELIAWLVDEGVIEVGDDARALVDVDSVLAARTLRELDVDWSGIALILRLRRELAEARHQIARLTAELEARHEADGGAGRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061073

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences