Metagenome / Metatranscriptome Family F061062

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061062
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	79 residues
Representative Sequence	MSSFAAHILVSTSRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTD
Number of Associated Samples	97
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.69 %
% of genes near scaffold ends (potentially truncated)	96.97 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.848 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.96% β-sheet: 0.00% Coil/Unstructured: 66.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13701	DDE_Tnp_1_4	1.52
PF12697	Abhydrolase_6	1.52
PF09347	DUF1989	1.52
PF13924	Lipocalin_5	1.52
PF17172	GST_N_4	1.52
PF13378	MR_MLE_C	0.76
PF04116	FA_hydroxylase	0.76
PF08323	Glyco_transf_5	0.76
PF02517	Rce1-like	0.76
PF04909	Amidohydro_2	0.76
PF07969	Amidohydro_3	0.76
PF02668	TauD	0.76
PF02195	ParBc	0.76
PF02371	Transposase_20	0.76
PF01593	Amino_oxidase	0.76
PF10027	DUF2269	0.76
PF01738	DLH	0.76
PF00903	Glyoxalase	0.76
PF02775	TPP_enzyme_C	0.76
PF00449	Urease_alpha	0.76
PF01292	Ni_hydr_CYTB	0.76
PF14226	DIOX_N	0.76
PF02635	DrsE	0.76
PF03401	TctC	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	0.76
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0804	Urease alpha subunit	Amino acid transport and metabolism [E]	0.76
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.76
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.76
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.76
COG3038	Cytochrome b561	Energy production and conversion [C]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.76
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.76
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
All Organisms	root	All Organisms	40.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
cellular organisms	root	All Organisms → cellular organisms	40.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.15 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	9.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.27 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.52 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.52 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.76 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.58 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.52 %
unclassified Rhizomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium	0.76 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.76 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.58 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.52 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.76 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.76 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10066094	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300004633\|Ga0066395_10016189	All Organisms → cellular organisms → Bacteria → Proteobacteria	2878	Open in IMG/M
3300004633\|Ga0066395_10055409	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300004633\|Ga0066395_10884663	Not Available	540	Open in IMG/M
3300004635\|Ga0062388_101012808	Not Available	808	Open in IMG/M
3300005187\|Ga0066675_11445813	Not Available	503	Open in IMG/M
3300005332\|Ga0066388_101129591	Not Available	1330	Open in IMG/M
3300005332\|Ga0066388_102233941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300005332\|Ga0066388_105183017	Not Available	661	Open in IMG/M
3300005332\|Ga0066388_106342053	Not Available	597	Open in IMG/M
3300005332\|Ga0066388_108728433	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005531\|Ga0070738_10346467	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005542\|Ga0070732_10278538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1003	Open in IMG/M
3300005587\|Ga0066654_10462353	Not Available	694	Open in IMG/M
3300005712\|Ga0070764_10919507	Not Available	549	Open in IMG/M
3300005764\|Ga0066903_101655562	Not Available	1216	Open in IMG/M
3300005764\|Ga0066903_102877898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	933	Open in IMG/M
3300005764\|Ga0066903_102897180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300005764\|Ga0066903_103717650	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005764\|Ga0066903_104096908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	781	Open in IMG/M
3300005764\|Ga0066903_104478443	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005764\|Ga0066903_107645695	Not Available	557	Open in IMG/M
3300005995\|Ga0066790_10189409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	880	Open in IMG/M
3300006028\|Ga0070717_11571579	Not Available	596	Open in IMG/M
3300006031\|Ga0066651_10264527	Not Available	913	Open in IMG/M
3300006050\|Ga0075028_100165307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1177	Open in IMG/M
3300006176\|Ga0070765_101906448	Not Available	557	Open in IMG/M
3300006176\|Ga0070765_102151140	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006354\|Ga0075021_10061757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2180	Open in IMG/M
3300009143\|Ga0099792_10121631	Not Available	1403	Open in IMG/M
3300009143\|Ga0099792_11057618	Not Available	545	Open in IMG/M
3300009700\|Ga0116217_10485629	Not Available	777	Open in IMG/M
3300010046\|Ga0126384_11882908	Not Available	570	Open in IMG/M
3300010048\|Ga0126373_10292605	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300010049\|Ga0123356_11717488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300010358\|Ga0126370_10576081	Not Available	967	Open in IMG/M
3300010358\|Ga0126370_12284080	Not Available	535	Open in IMG/M
3300010359\|Ga0126376_10119172	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300010359\|Ga0126376_13092184	Not Available	515	Open in IMG/M
3300010360\|Ga0126372_10796617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300010362\|Ga0126377_10120091	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300010362\|Ga0126377_12627360	Not Available	579	Open in IMG/M
3300010376\|Ga0126381_100296328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2213	Open in IMG/M
3300010376\|Ga0126381_104957106	Not Available	511	Open in IMG/M
3300012096\|Ga0137389_10290377	Not Available	1382	Open in IMG/M
3300012202\|Ga0137363_10434122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	1097	Open in IMG/M
3300012205\|Ga0137362_10653616	Not Available	905	Open in IMG/M
3300012211\|Ga0137377_10785925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	885	Open in IMG/M
3300012357\|Ga0137384_11181487	Not Available	609	Open in IMG/M
3300012359\|Ga0137385_11222647	Not Available	613	Open in IMG/M
3300012362\|Ga0137361_11168935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	691	Open in IMG/M
3300012362\|Ga0137361_11831839	Not Available	524	Open in IMG/M
3300012683\|Ga0137398_10098145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1838	Open in IMG/M
3300012683\|Ga0137398_11061332	Not Available	559	Open in IMG/M
3300012944\|Ga0137410_10669304	Not Available	863	Open in IMG/M
3300012944\|Ga0137410_11332585	Not Available	622	Open in IMG/M
3300012971\|Ga0126369_10248902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300012971\|Ga0126369_10608084	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300014200\|Ga0181526_10864030	Not Available	569	Open in IMG/M
3300014325\|Ga0163163_10682886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300015374\|Ga0132255_104217243	Not Available	610	Open in IMG/M
3300016319\|Ga0182033_10105679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2082	Open in IMG/M
3300016319\|Ga0182033_10679638	Not Available	900	Open in IMG/M
3300016319\|Ga0182033_11607882	Not Available	588	Open in IMG/M
3300016341\|Ga0182035_11493534	Not Available	608	Open in IMG/M
3300016357\|Ga0182032_10382614	Not Available	1134	Open in IMG/M
3300016357\|Ga0182032_11068269	Not Available	691	Open in IMG/M
3300016387\|Ga0182040_10365145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1123	Open in IMG/M
3300016404\|Ga0182037_11299678	Not Available	641	Open in IMG/M
3300017943\|Ga0187819_10574477	Not Available	640	Open in IMG/M
3300017961\|Ga0187778_11105682	Not Available	552	Open in IMG/M
3300017970\|Ga0187783_10579878	Not Available	812	Open in IMG/M
3300017972\|Ga0187781_10347179	Not Available	1056	Open in IMG/M
3300017975\|Ga0187782_11578429	Not Available	518	Open in IMG/M
3300018034\|Ga0187863_10323643	Not Available	857	Open in IMG/M
3300018062\|Ga0187784_11163879	Not Available	612	Open in IMG/M
3300018072\|Ga0184635_10255633	Not Available	693	Open in IMG/M
3300019879\|Ga0193723_1149324	Not Available	628	Open in IMG/M
3300020006\|Ga0193735_1131392	Not Available	671	Open in IMG/M
3300020583\|Ga0210401_11284891	Not Available	590	Open in IMG/M
3300021171\|Ga0210405_11172692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300021180\|Ga0210396_11480840	Not Available	559	Open in IMG/M
3300021344\|Ga0193719_10319448	Not Available	649	Open in IMG/M
3300021388\|Ga0213875_10080103	Not Available	1524	Open in IMG/M
3300021476\|Ga0187846_10089934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1327	Open in IMG/M
3300021477\|Ga0210398_10894128	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300021478\|Ga0210402_11790670	Not Available	540	Open in IMG/M
3300021479\|Ga0210410_10554327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300021560\|Ga0126371_13144639	Not Available	558	Open in IMG/M
3300022722\|Ga0242657_1207785	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025916\|Ga0207663_10938230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300025928\|Ga0207700_11899435	Not Available	522	Open in IMG/M
3300026355\|Ga0257149_1069324	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026371\|Ga0257179_1027341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300026376\|Ga0257167_1068640	Not Available	554	Open in IMG/M
3300026508\|Ga0257161_1037220	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300026508\|Ga0257161_1116376	Not Available	559	Open in IMG/M
3300027030\|Ga0208240_1033062	Not Available	577	Open in IMG/M
3300027908\|Ga0209006_10258321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1497	Open in IMG/M
3300027908\|Ga0209006_11488155	Not Available	513	Open in IMG/M
3300028536\|Ga0137415_10298103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300028673\|Ga0257175_1081297	Not Available	622	Open in IMG/M
3300028814\|Ga0307302_10169080	Not Available	1062	Open in IMG/M
3300028906\|Ga0308309_11056357	Not Available	703	Open in IMG/M
3300030524\|Ga0311357_10972707	Not Available	749	Open in IMG/M
3300031719\|Ga0306917_10479659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	976	Open in IMG/M
3300031744\|Ga0306918_10353170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1141	Open in IMG/M
3300031744\|Ga0306918_10598670	Not Available	864	Open in IMG/M
3300031744\|Ga0306918_10852135	Not Available	711	Open in IMG/M
3300031781\|Ga0318547_10806825	Not Available	585	Open in IMG/M
3300031821\|Ga0318567_10893003	Not Available	503	Open in IMG/M
3300031890\|Ga0306925_11737991	Not Available	600	Open in IMG/M
3300031912\|Ga0306921_11868575	Not Available	644	Open in IMG/M
3300031941\|Ga0310912_11319030	Not Available	547	Open in IMG/M
3300031946\|Ga0310910_10403040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1084	Open in IMG/M
3300031946\|Ga0310910_10980893	Not Available	661	Open in IMG/M
3300031954\|Ga0306926_10226144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2322	Open in IMG/M
3300031954\|Ga0306926_10521778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1458	Open in IMG/M
3300032001\|Ga0306922_10218110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2048	Open in IMG/M
3300032001\|Ga0306922_11321983	Not Available	728	Open in IMG/M
3300032076\|Ga0306924_11204366	Not Available	819	Open in IMG/M
3300032160\|Ga0311301_10426020	All Organisms → cellular organisms → Bacteria → Proteobacteria	2015	Open in IMG/M
3300032180\|Ga0307471_102663437	Not Available	634	Open in IMG/M
3300032261\|Ga0306920_100899074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1295	Open in IMG/M
3300032261\|Ga0306920_102543857	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300032261\|Ga0306920_102917577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	648	Open in IMG/M
3300032783\|Ga0335079_10742305	Not Available	1022	Open in IMG/M
3300033289\|Ga0310914_10941875	Not Available	763	Open in IMG/M
3300033289\|Ga0310914_11223586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	653	Open in IMG/M
3300033290\|Ga0318519_11077306	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.97%
Host-Associated	Host-Associated	3.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Aquatic	Environmental → Aquatic	6.06%
Plants	Host-Associated → Plants	2.27%
Arthropoda	Host-Associated → Arthropoda	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.39%
Freshwater	Environmental → Aquatic → Freshwater	3.79%
Sediment	Environmental → Aquatic → Sediment	2.27%
Roots	Host-Associated → Plants → Roots	1.52%
Peat	Environmental → Terrestrial → Peat	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.39%
Loam	Environmental → Terrestrial → Soil → Loam	19.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.76%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_100660942	3300004268	Tropical Forest Soil	MSSFAAHILESTLRSRLLGSGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTDPNYPYN
Ga0066395_100161894	3300004633	Tropical Forest Soil	MSSFAAHILESTLRSRLLGSGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGP
Ga0066395_100554092	3300004633	Tropical Forest Soil	MSSFAAHILVPTLRGRFLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGP
Ga0066395_108846631	3300004633	Tropical Forest Soil	MSSFAARDLVSTLRNRLLAGGVVAGFLAVTLIPTFSVAAPAGDSIPQLGSRDFGWNANFWDFQLDPPQGSGHGPIKTDPKYPYNSQCQNG
Ga0062388_1010128082	3300004635	Bog Forest Soil	MSSFAAHLLVSTLRSRLLAGGVVAGFFAVTLIPSFSVAARAEESIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKT
Ga0066675_114458132	3300005187	Soil	MSPFASHMWVPTLRSRLLVSGVVAGFLVVTLIPPFCVAAFGTDSIPQLGGRDVAWNANFWDFQLDPPPGSARGPMKTDP
Ga0066388_1011295911	3300005332	Tropical Forest Soil	MSSFAAHILESTLRSRLVAGGVVAGFLAVTLIPSFSVAATVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIK
Ga0066388_1022339411	3300005332	Tropical Forest Soil	MSSFAAPILVPTSRNHLLAGGVVAGFLAVTLIPSFPVAARAEDRIPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTDPNYPYTSECQNGRCIA
Ga0066388_1051830172	3300005332	Tropical Forest Soil	MSSFAAPILVSTLRSHLLAGGVVAGFLAATLIPSFSLVARAEDSIPQLGSRDSGWNANFWDFQLDPPPG
Ga0066388_1063420532	3300005332	Tropical Forest Soil	MSSFAAHILVSALRSRLLTGGVVAGFLAVTLVPSFSVAGPVEDSIPQLGSRDFGWNANFWDFQLDPPPGS
Ga0066388_1087284331	3300005332	Tropical Forest Soil	MSSFAAHILESTLRSRLLAAGVVAGVLVTLIPSFSAAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYN
Ga0070738_103464671	3300005531	Surface Soil	MLKERFLQSNPPGDVEKTPMLSFAAHVLVSTLWSRLPARGVVAGLLAIGLIPSLSVAAPAENSIPQLGSRDFGWNANFWDFQLDPPPGSGHGPIK
Ga0070732_102785381	3300005542	Surface Soil	MSSFAAHILVSTLRSRLLAGGVVAGFLAATLIPSHSVAAPGADSIPQLGSGSWNANFWDFQLDPPQGS
Ga0066654_104623531	3300005587	Soil	MSPFASHMWVPTLRSRLLVSGVVAGFLVVTLIPPFCVAAFGTDSIPQLGGRDVGWNANFWDFQLDPPP
Ga0070764_109195072	3300005712	Soil	MSSFAAHISVSTLRSRLLAGGVVAGFLAVTVAPSFSEAARADDTIPQFGSRDFGWNVNFWDFQLDPPQGS
Ga0066903_1016555621	3300005764	Tropical Forest Soil	MSSFAARDLVSTLRNRLLAGGVVAGFLAVTLIPTFSVAAPAGDSIPQLGSRDFGWNANFWDFQLDPPQGSGHGPIKTDPK
Ga0066903_1028778981	3300005764	Tropical Forest Soil	MSSFAAHISISTWRRGLVAGSVLASLFAFILDPSFSMAVPAEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPM
Ga0066903_1028971802	3300005764	Tropical Forest Soil	MSSFAAQILVSTLRSRLLAGGVAAGFLAVTLVPSFSVAGPVEDSIPQLGSRDFGWNANFWDFQLAPP
Ga0066903_1037176503	3300005764	Tropical Forest Soil	MSSFAAHILVPTLRSRLVAGGVVAGFLAVTLIPAFSVAAPAEDSAPQLGSRDFGWNANFWDFQLDPPQGS
Ga0066903_1040969081	3300005764	Tropical Forest Soil	MSSLAAHILISTLRSRLLAGGVVAGCPALTVIPSCSVAAPAKDSVPQLGSLDSGWNVNFWDFQLDPPQGSGHGPIKTDP
Ga0066903_1044784432	3300005764	Tropical Forest Soil	MPSFAVHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGP
Ga0066903_1076456952	3300005764	Tropical Forest Soil	MSSFATHILVSTLRGRLLAGGVVAGFLAVTLIPSFSVGAPVEDPIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDP
Ga0066790_101894092	3300005995	Soil	MSSFAARILVSTLRSRLLAGGVVAGFLAVTLVPSFSVAAPVGDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPKY
Ga0070717_115715791	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRFAARLLIPTLIPTLRSRLLAGGVAAVLAAILVPAFSGPASAADSIPQLAPQGAGWAADFWDFQLDPPQGSGHGP
Ga0066651_102645272	3300006031	Soil	MSPFASHMWVPTLRSRLLVSGVVAGFLVVTLIPPVCVAAFGTDSIPQLGGRDVGWNANLWDFQLNPPPGSAHGPMQTDPRYPYT
Ga0075028_1001653071	3300006050	Watersheds	MSSLAARLLVSTLRGRLLAAGVVAGFLAVALVPSPAAAAPDSIPQLGSGDFGWNANFWDFQLDPPPGSGHGPMKTDPKYPYTSQCQNGG
Ga0070765_1019064481	3300006176	Soil	MSSFAAHILVSTLRSRLLAGGVVAGLLAVTLIPSFSVTAPAEDSIPKLGSRDFGWNVNFWDFQLDPPQGS
Ga0070765_1021511401	3300006176	Soil	MSSLAAHILVSTLRSRLLAGGVVAGFLAAALVPSLSAAAPVEDSIPQLGSRDFGWNANFWDFQL
Ga0075021_100617571	3300006354	Watersheds	MWSFAAHILVSTLRSRLLTGGVLAGFLAVTLVPSLSVAAPAGDSIPQLGSRDFGWNVNFWDFQLDPPPGSAHGPMK
Ga0099792_101216311	3300009143	Vadose Zone Soil	MSSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSMAAPVEDSTPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQIQNGGF
Ga0099792_110576182	3300009143	Vadose Zone Soil	VSSFAAHILVSTFWSRLLAGGVVAGFLAVSLVASFSVAGPVEESIPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTD
Ga0116217_104856292	3300009700	Peatlands Soil	MSSFAAHILASTLRSGLLGSGVVAGFLAVTLIPSFSAAARAEDSVPQLGSRDSGWNANFWDFQLDPPPGSAHGPIKTDPKYPYISQCQ
Ga0126384_118829081	3300010046	Tropical Forest Soil	MPSFAAHILESTLRSRLLAGGVVAGFLVTLIPSFSAAAAVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHG
Ga0126373_102926052	3300010048	Tropical Forest Soil	MEKTPMLSFAAHILVSTLRGRLLAGGVVAGFLAGILIPSFCVAAPVEDSLPRLGSGDFGWNANFWDFQLDPPQGSA
Ga0123356_117174882	3300010049	Termite Gut	MSSSAAHILVSTLPSRLLAGSVVAGFLAVTLISSVCVAAPVEESIPQLGSRDFGWNANFWDFQLDPPQGSAH
Ga0126370_105760811	3300010358	Tropical Forest Soil	MSSFAAHILESTLRSRLLGGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTDPNYPYNSQIQNGR
Ga0126370_122840801	3300010358	Tropical Forest Soil	MSSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQIQNGRFCT
Ga0126376_101191723	3300010359	Tropical Forest Soil	MSSFAAHILVSTLRSRLLAGSVVAGFLAVTLIPSFSGAAPAEDSIPQLGSRDSGWNANFWDFQLDPPPGSAH
Ga0126376_130921842	3300010359	Tropical Forest Soil	MSSFAAHILVPTLRSRLVAGGVVAGFLAVTLIPAFSVAAPAEDSAPQLGSRDFGWNANFWDFQL
Ga0126372_107966171	3300010360	Tropical Forest Soil	MSSFAAHILVSTLRSRLLAGRVVAGFLAVALIPSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLD
Ga0126377_101200913	3300010362	Tropical Forest Soil	MSSFAAHILVSTLRSRLLAGRVVAGFLAVALIPSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPIKTDPNYPYTSECQNGRCIA
Ga0126377_126273601	3300010362	Tropical Forest Soil	MWVLTLRNRLLLSGVVAGFLVVTLVSPFGVIASGADSIPQLGGRDVGWNANFWDFQLDPPAGSAHGPMKTDPRYPYTSQCQNG
Ga0126381_1002963281	3300010376	Tropical Forest Soil	MSSFAVHTFVSILRSRLLAGGAVAGLLAVTLALSFSVAAPAADSIPQLGSGDFGWNANFWDFQLDPPQGSGH
Ga0126381_1049571061	3300010376	Tropical Forest Soil	MEKTPMLSFAAHILVSTLRGRLLAGGVVAGFLAGILIPSFCVAAPVEDSLPRLGSGDFGWNANFWDFQLDPPQ
Ga0137389_102903772	3300012096	Vadose Zone Soil	MSSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNS
Ga0137363_104341222	3300012202	Vadose Zone Soil	MWSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTDPNYPYTSE
Ga0137362_106536162	3300012205	Vadose Zone Soil	MSSFSAPILVSTLRGRLLAGGVVAGFLAVTLVPSFSVAGPVEDTIPQLGSRDFGWNANFWDFQLDPPPGSGHGPMKTDPKYPYTSQCQNGGCF*
Ga0137377_107859251	3300012211	Vadose Zone Soil	MSSFAAHILVSTLRSHLLAGGVVAGFLAVTLIPSFSVAAPAGDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQIQNG
Ga0137384_111814872	3300012357	Vadose Zone Soil	MSSFAAHILISTLRSRLLAGGVVAGFLAVTLVPSFSVAAPAGDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQIQNGGFF
Ga0137385_112226471	3300012359	Vadose Zone Soil	MSSFAAHILISTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQ
Ga0137361_111689351	3300012362	Vadose Zone Soil	MSSFAAPILVSTLRSHLLAGGVVASFLAVTLIPSFSVVARAEDSTPQLGSRDSGWNANFWDFQLDPPPGSAH
Ga0137361_118318391	3300012362	Vadose Zone Soil	MSSFAAPILVSTLRSHLLAGSVVASFLAVTLIPSFSVAARAEDSTPQLGSRDSGWNANFWDFQLDPPPGSAHGPMKT
Ga0137398_100981451	3300012683	Vadose Zone Soil	MSSFSAPILVSTLRGRLLAGGVVAGFLAVTLVPSFSVAGPVEDTIPQLGSRDFGWNANFWDFQLDPPPGSAHG
Ga0137398_110613321	3300012683	Vadose Zone Soil	MSSFAAHISVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLD
Ga0137410_106693042	3300012944	Vadose Zone Soil	MSSFAAPILVSTLRSHLLAGGVVAGFLAVTLIPSFSVVARAEDSTPQLGSRDSSWNANFWDFQLDPPPGSAHGPMKTDPNY
Ga0137410_113325852	3300012944	Vadose Zone Soil	MLSFAGDILASTLRSRLLAGGVVAGFLAVTLVPSFSVAAPVGDSIPQLGSRGFGWNVNFWDFQLDP
Ga0126369_102489021	3300012971	Tropical Forest Soil	MSSFAAHILESTLRSRLLGSGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPI
Ga0126369_106080842	3300012971	Tropical Forest Soil	MPSFAAYILASTLRSRLLAGGVVAGFLAVALTPSFSLAAPVEESIPQLGSRDFGWNANFWDFQLDPPQGSAH
Ga0181526_108640301	3300014200	Bog	MSSFAAHILVSTLWSRLLAGGVIAGFLAVTLIPSFSAAAPAEDSIPQIASRDFGWNANFWDFQLDPPPGSAH
Ga0163163_106828861	3300014325	Switchgrass Rhizosphere	MWVSTLRSRLLAIGVVAGFLVVTLIPPFCGAASGTDSIPQLGGQNVRWNANFWDFQLDPPPDAAHGPMKTDPNYPYVSQCQNGGCN
Ga0181522_110338602	3300014657	Bog	MSPFAPLVSTLRSRLLAGGVVAGLLASPLIPSISVAGDAVPQLGSRDFGWSANFWDF
Ga0132255_1042172431	3300015374	Arabidopsis Rhizosphere	MSPFAAHLRVPTLRSHLLASGVVAGFLVVTLIPPFCVAAFGTDSIPQLGGRDVGWNANFWDFQLDPPAGSAHGPMKTDPRYP
Ga0182033_101056792	3300016319	Soil	MSSFAAHISISTSRRGLLAGSVLAGLSAFILDPSFSVAAPAEDSTPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTDPNYPYT
Ga0182033_106796381	3300016319	Soil	MSSFAAHILVSTLRGRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPLGSAHGPIKTDP
Ga0182033_116078821	3300016319	Soil	MSSFAACDLASTLRDRLLAGGVVAGFLAATLVPSFSVAAPAGDSIPQLGSLDSGWNVNFWDFQLDPPQGSGHGPIKTDPKYPYNSQIQNGG
Ga0182035_114935342	3300016341	Soil	MWSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPEDSIPQLGSRDFGWNVNFWDFQLDPPQGSG
Ga0182032_103826141	3300016357	Soil	MSSFAAHILPSTSRSRLLAGGVVAGFLAVTPIPSFSVAALAGDAIPQLGSGNFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQI
Ga0182032_110682692	3300016357	Soil	MWSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYNSQI
Ga0182040_103651451	3300016387	Soil	MSSFAAHILVSRLWSRLLANGVVVGFLAVTLISSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPP
Ga0182037_112996781	3300016404	Soil	MSSFAAHILPSTSRSRLLAGGVVAGFLAVTPIPSFSVAALAGDAIPQLGSGNFGWNVNFWDFQLDPPQGSAHG
Ga0187819_105744771	3300017943	Freshwater Sediment	MSSFAAHNRVPTWRRHWLTYGVVAAFLAVTFLPSFSARAENNIPQLGSRDFGWNVNFWDFQLDPPPGSGHGPMKTDPNYPYNSQIQN
Ga0187778_111056822	3300017961	Tropical Peatland	MSSFAAHVLISTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTDPNYPFNSQIQNGRLFTG
Ga0187783_105798781	3300017970	Tropical Peatland	MSSFTAHILVSTLRSHLLAGGVVAGFLAVALIPSFSVAEPAADTIPQLGSRDFGWNVNFWDFQLDPPPGSGH
Ga0187781_103471792	3300017972	Tropical Peatland	MRGKTAMSSFAAQILASTLRKHLLTSGVVAGFLAVAFAPSFSVVAHAGDSIPQLGSWNVNFWDFQLDPPPGSGHGP
Ga0187782_115784291	3300017975	Tropical Peatland	MRGKTAMSSFAAQILASTLRKHLLTSGVVAGFLAVAFVPSFSVVAHAGDSIPQLGSWNVNFWDFQLDPPPGSGTDR
Ga0187863_103236431	3300018034	Peatland	MSSFAAHILVSTLRSRLRAGGIVAGLLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAH
Ga0187784_111638791	3300018062	Tropical Peatland	MSSFAAHILLSTLRSHLLTSGVVAGFLAGTLIPSFSVAGPVEDSIPRLGSRDVGWSANFWDFQLDP
Ga0184635_102556331	3300018072	Groundwater Sediment	MAPFASHMWVSTVRSRLLVGGVVAGFLVVTLIPPFCVAASGTDSIPQLGGRDVGWNANFWDFQLDPPPGSGHGPMKTDPSYPYTSQCQNGG
Ga0193723_11493242	3300019879	Soil	MSPFASHMWVPTLRSRLLVSGVVAGFLVVTLIPPFCVAAFGTDSIPQLGGRDVGWNANFWDFQLDPPSGSAHGPMKTDPNYPYVSQCQN
Ga0193735_11313921	3300020006	Soil	MSPFASPMRVPTLRNRLLIRGVVAGFLMVTLISPFCVAAFGTDSVPQFGGRDVGWNANFWDFQLDPPPGSAHGPMKTDPRYPYASQCQNGG
Ga0210401_112848911	3300020583	Soil	MSSFAAHILVSTLRGCLLAGRVVAGFLAVTLVPSFSVAGPVDDTIPQLGSRDSGWNVNFWDFQLDPPPGSGHGPMKIDPKYPYRSQCQN
Ga0210405_111726921	3300021171	Soil	MSSFAAHILVSTLRNRLLAGGVVAGFLAVALVPSFSAAAPVGDSIPQLGSRDFGWNANFWDFQLDP
Ga0210396_114808401	3300021180	Soil	MSSLAAHILVPTLWSRLLAGRVVAGFLAVTLVPSFSVAGPVDDTIPQLGSRDSGWNVNFWDFQLDPPPGSGHGPMKIDPKYPYRSQCQNGGCS
Ga0193719_103194481	3300021344	Soil	MSPFASHMWVPTLRNRLLIRGVVAGFLVVTLIPPFCVAAFGTDSVPQFGGRDVGWNANFWDFQLDPPPGSAHGPMKTDPRYPYTSQCQNGG
Ga0213875_100801031	3300021388	Plant Roots	MSSFAAHIVELASRRRMLAGGAVAGFLAVTLMRSFAFAAPVEEHIPRLGDSGWNVNFWDF
Ga0187846_100899342	3300021476	Biofilm	MPSFAAYILASTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIK
Ga0210398_108941282	3300021477	Soil	MSSFAAHTLVSTLRSRLLAGGVVAGFLAVTFIPSFSLAAPVEDSIPRLGSRAFGWNVNFW
Ga0210402_117906701	3300021478	Soil	MSSFAARDLVSKLRNRLLAGAVVAGFLAVALIQSFSVAAPAGDSIPQLGSRDFGWNANFWDFQLDPPQGSGHGPIKTDPKYPYNSQCQNGG
Ga0210410_105543271	3300021479	Soil	MSSFAAHILVSTFWSRSLAGVVAGFLAVTLIPSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPPPGTAH
Ga0126371_131446391	3300021560	Tropical Forest Soil	MSFAAHILVSKLRYRLLTGAAFAGFLAVTLAPSFSVAAPADSIPKLGSREFGWNANFWDFQLDPPQGSGHGPMKTDPAYPYNSQIQFGHRFTGEL
Ga0242657_12077852	3300022722	Soil	MSSFAAHILVSTLRSRLLAVGVVAGLLAVTLVPSFSVAASVEGSIPLLGSRDFGWNANFWDFQLDPPQGSAHGPIK
Ga0207663_109382301	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSSFAARTLGSTLGSRLLAGVVVAGFLAATLIPSLSVAAEDSIPQLGSRVFGWNVNFWDFQLDPPQGSGHGPIKTDPKYPYNSQIQN
Ga0207700_118994351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSSIATHILVSTLRSRLLAGSVVAGFLAVTLIPSFSVAALAEDSIPRLGSLDSGWNANFWDFQLDPPQGSGH
Ga0257149_10693241	3300026355	Soil	MSSSAAHILVSTLRSHLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWSANFWDFQLDPPQGS
Ga0257179_10273412	3300026371	Soil	MSSFATHLSVSTLRSPLLAGGVVVGCLAVILIPSFSMAAPVKDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTH
Ga0257167_10686402	3300026376	Soil	MSSFAAPILVSTLRSHLLAGGVVAGFLAVTLIPSFSVVARAEDSVPQLGSRDSGWNANFWDFQLDPPPGSAHGPMKTDPNYPYTSQCQNGGCFGD
Ga0257161_10372201	3300026508	Soil	MSSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKTDPNYPYN
Ga0257161_11163762	3300026508	Soil	MSSFAAHILVSTLRSRLLAGSVVAGFLAITLIPSFSVAAPVENSIPQLGSRDFGWNVNFWDFQLDPPQGSGHGPIKTDP
Ga0208240_10330622	3300027030	Forest Soil	MSSFAAQVLVSTLQGRLRAGGVLAGFLAITLVPSFSVAGPVEDTIPQLGSRDFGWNVNFWDFQLDPPPGSGHGPMKTDPKYPYRSQCQN
Ga0209006_102583211	3300027908	Forest Soil	MSSLVSSLAAHLLVTLRGRLLAGGVVATLVAVALVPSPSAAAPESIPQLGSGDFGWNANFWDFQLDPPPGSGHGPMRTDPK
Ga0209006_114881551	3300027908	Forest Soil	MLSFVAHILVSTWRSCLLAGGVVAGFLAVTLAPSFSEGSPADDTIPQFGSRDFGWNVNFWDFQLDPPPGAAHGPMKTDPKYPYRS
Ga0137415_102981031	3300028536	Vadose Zone Soil	MSSFATHLSVSTLRSPLLAGGVVVGCLAVILIPSFSAAAPPEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTD
Ga0257175_10812971	3300028673	Soil	VSSFAAHILVSTFWSRLLAGGVVAGFLAVSLVASFSVAGPVEESIPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKTDPNYPYTSQCQNGGCF
Ga0307302_101690802	3300028814	Soil	MAPFASHMWVSTVRSRLLVSGVVAGFLVVTLISPFCVAAFGTDSIPQLGGRNVAWNANFWDFQLDPPPGSAHGPMKTDPNYPYVSQCQNGG
Ga0308309_110563572	3300028906	Soil	MSSFAAHISVSTLRSRLLAGGIVAGFLAVTVAPSFSEAARADDTIPQFGSRDFGWNVNFWDFQLDPPLGSGHGPMKTDPKYPYRS
Ga0311357_109727071	3300030524	Palsa	MSSFAAHILVSTLRSRLLAGGIVAGFLAVTVIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPQGSAHGPIKT
Ga0306917_104796592	3300031719	Soil	MSSFATHISISTSRRDLLAGSVLASLFAFILDPSFSVAAPAEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPM
Ga0306918_103531702	3300031744	Soil	MSSFAAHILVSRLWSRLLANGVVVGFLAVTLIPSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPP
Ga0306918_105986701	3300031744	Soil	MSSFAVHILVSTLRSRLLAGGLVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQ
Ga0306918_108521351	3300031744	Soil	MSSFAARDLVSTLRNRLLAGGVVAGFLAVTLIPTFSVAAPAGDSIPQLGSRDFGWNANFWDFQLDPPQGSGHGPIKSDPKYPYNIQCQN
Ga0318547_108068251	3300031781	Soil	MPSFAIHILVSTLWSCLLTGGAVAGLLAVTLISSLSVAAPVEDAIPQLGSLGFGWNVNFWDFQLDPPEGLGHGPIKTDPNYPYNSQIQNG
Ga0318567_108930032	3300031821	Soil	MSSFAVHTLVSILRSRLLAGGAVAGLLAVTLALSFSVAAPAADSIPQLGSGDFGWNANFWDFQLDPPQGSGHGPIKTDPN
Ga0306925_117379911	3300031890	Soil	MSSFAAHILVSTLRGRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNVNFWDFQLDPPLGSAHGPIKTDPNYPYNSQIQ
Ga0306921_118685752	3300031912	Soil	MSSLAAHILISTLRSRLLAGAVVAGSLAVPLIPSCSVAAPDKESVPQLGSLDSGWNVNFWDFQLDPPQGSGHGPIKTDPKYPYNSQI
Ga0310912_113190301	3300031941	Soil	MSSFAVHTLVSILRSRLLAGGAVAGLLAVTLALSFSVAAPAADSIPQLGSGDFGWNANFWDFQLDPPQGSGHGPI
Ga0310916_115058252	3300031942	Soil	MSSFAAHILPSTSRSRLLAGGVVAGFLAVTPIPSFSVAALAGDAIPQLGSGNFGWNVNFW
Ga0310910_104030402	3300031946	Soil	MSSFAAHISISTSRRGLLAGSVLAGLFAFILDPSFSVAAPGEDSIPQLGSRNFGWNVNFWDFQLDPPPGSAHGPIKTDPDYPYNSQ
Ga0310910_109808931	3300031946	Soil	MSSFAARDLVSTLRNRLLAGGVVAGFLAVTLIPTFSVAAPAGDSIPQLGSRDFGWNANFWDFQLDPPQGSGHGPIKTDPKYPYN
Ga0306926_102261441	3300031954	Soil	MSSFAAHILVSRLWSRLLANGVVVGFLAVTLISSFSAAAPAEDSIPQLGSRDFGWNANFWDFQLDPPPDSAHGPMKTDPNYPYT
Ga0306926_105217782	3300031954	Soil	MSSFAVHILVSTLRSRLLAGGLVAGFLAVTLIPSFLVAAAAEDSTPRLGSGDFGWNANFW
Ga0306922_102181101	3300032001	Soil	MSSFAAHISISTSRRGLLAGSVLAGLSAFILDPSFSVAAPAEDSTPQLGSRDFGWNANFWDFQLDPPPGSAHGPMKT
Ga0306922_113219832	3300032001	Soil	MSSFAACDLASTLRDRLLAGGVVAGFLAATLVPSFSVAALAGDSIPQLGSLDSGWNVNFWDFQLDPPQGSGHGPIKTDPKYPYNSQIQNGG
Ga0306924_112043661	3300032076	Soil	MSSFAVHILVSTLRSRLLAGGLVAGFLAVTLIPSFLVAAAAEDSTPRLGSGDFGWNANFWDFQLDPPQGSGHGPMKTDPNYPYNSQIQNGR
Ga0311301_104260201	3300032160	Peatlands Soil	MSSFAAHILVSTSRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSAHGPIKTD
Ga0307471_1026634371	3300032180	Hardwood Forest Soil	MSSFAAHIVGSTLRSRLLAGGVVAGFLGVALVPSFSVAAPGDSIPQLASGGAGWNANFWDFQLDPPAGSGHGP
Ga0306920_1008990743	3300032261	Soil	MSSFAAHISVSTSRRGLLAGSVLAGLFAFILDPSFSVAAPGEDSIPQLGSGNFGWNVNFWDFQLDPPPGSAHGPIKTD
Ga0306920_1025438572	3300032261	Soil	MSSFAAHILPSTLRGRLVVAGFLAVALVPPCSVAAPAADSIPQLGSLNSGWNANFWDFQLDPPTGSGHG
Ga0306920_1029175771	3300032261	Soil	MSSLAAHILISTLRSRLLAGAVASGSLAVTLIPSCSVAAPDKESVPQLGSLDSGWNVNFWDFQLDPPQGSGHGPIKTDPK
Ga0335079_107423052	3300032783	Soil	MPSFAIHILVSTLQSRSLASGVVAGFLAVTLIPSFSVAALAEDSIPRLGSVDSGWNANFWDFQLDPPQGA
Ga0310914_109418752	3300033289	Soil	MWSFAAHILVSTLRSRLLAGGVVAGFLAVTLIPSFSVAAPVEDSIPQLGSRDFGWNANFWDFQLDPPQGSG
Ga0310914_112235861	3300033289	Soil	MSSFAAHISISTSRRGLLAGGVLAGLSAFILDPSFSVAAPAEDSIPQLASRDFGWNANFWDFQLDPPPGSAHGPMKTDPNYPYTSECQNG
Ga0318519_110773062	3300033290	Soil	MSSFAADILASTLRSRLLAGGVVAGFLAVTLILPSFSAAALAEDSIPQLGSRDFGWNANFWDFQLDPPPGSAHGPIKTDPNYPYTSECQNGRCIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences