Metagenome / Metatranscriptome Family F061047

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061047
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	49 residues
Representative Sequence	IFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR
Number of Associated Samples	100
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	84.09 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (37.879 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (25.758 % of family members)
Environment Ontology (ENVO)	Unclassified (83.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (90.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF09718	Tape_meas_lam_C	7.58
PF13550	Phage-tail_3	3.79
PF00622	SPRY	0.76
PF13884	Peptidase_S74	0.76
PF13673	Acetyltransf_10	0.76
PF00583	Acetyltransf_1	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	43.18 %
Unclassified	root	N/A	37.88 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	18.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
cellular organisms	root	All Organisms → cellular organisms	36.36 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Viruses	superkingdom	All Organisms → Viruses	6.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.09 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.27 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.70 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.27 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	2.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
Rickettsiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia bacterium SCGC AAA164-M04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
Rickettsieae	tribe	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia bacterium SCGC AAA164-M04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
Rickettsia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia bacterium SCGC AAA164-M04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
spotted fever group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → spotted fever group	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia bacterium SCGC AAA164-M04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.88 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	18.94 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	11.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.27 %
Rickettsia hoogstraalii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → spotted fever group → Rickettsia hoogstraalii	1.52 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.52 %
Verrucomicrobia bacterium SCGC AAA164-M04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001589\|JGI24005J15628_10017821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-M04	3128	Open in IMG/M
3300001589\|JGI24005J15628_10031968	All Organisms → Viruses → Predicted Viral	2177	Open in IMG/M
3300001945\|GOS2241_1014894	Not Available	1467	Open in IMG/M
3300002231\|KVRMV2_100136304	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300002519\|JGI25130J35507_1094240	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300004460\|Ga0066222_1127549	Not Available	3268	Open in IMG/M
3300004829\|Ga0068515_106455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1490	Open in IMG/M
3300004829\|Ga0068515_107464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1384	Open in IMG/M
3300004829\|Ga0068515_115844	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300004951\|Ga0068513_1034773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	552	Open in IMG/M
3300005509\|Ga0066827_10323159	Not Available	522	Open in IMG/M
3300006029\|Ga0075466_1028396	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300006190\|Ga0075446_10009867	Not Available	3395	Open in IMG/M
3300006334\|Ga0099675_1539480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → spotted fever group → Rickettsia hoogstraalii	540	Open in IMG/M
3300006352\|Ga0075448_10179051	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300006404\|Ga0075515_10844501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → spotted fever group → Rickettsia hoogstraalii	505	Open in IMG/M
3300006565\|Ga0100228_1058000	Not Available	592	Open in IMG/M
3300006737\|Ga0098037_1016773	Not Available	2762	Open in IMG/M
3300006737\|Ga0098037_1022479	All Organisms → cellular organisms → Bacteria → Proteobacteria	2350	Open in IMG/M
3300006737\|Ga0098037_1088782	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300006750\|Ga0098058_1015699	All Organisms → cellular organisms → Bacteria → Proteobacteria	2239	Open in IMG/M
3300006750\|Ga0098058_1129874	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300006750\|Ga0098058_1162077	Not Available	588	Open in IMG/M
3300006754\|Ga0098044_1107192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300006754\|Ga0098044_1188900	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300006793\|Ga0098055_1031644	All Organisms → Viruses → Predicted Viral	2192	Open in IMG/M
3300006802\|Ga0070749_10099240	Not Available	1723	Open in IMG/M
3300006810\|Ga0070754_10041434	All Organisms → Viruses → environmental samples → uncultured marine virus	2493	Open in IMG/M
3300006810\|Ga0070754_10114132	unclassified Hyphomonas → Hyphomonas sp.	1322	Open in IMG/M
3300006916\|Ga0070750_10244696	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	780	Open in IMG/M
3300006919\|Ga0070746_10103136	Not Available	1420	Open in IMG/M
3300006919\|Ga0070746_10107706	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300006919\|Ga0070746_10248046	unclassified Hyphomonas → Hyphomonas sp.	832	Open in IMG/M
3300006921\|Ga0098060_1144955	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300007344\|Ga0070745_1026854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	2502	Open in IMG/M
3300007344\|Ga0070745_1032974	All Organisms → Viruses → environmental samples → uncultured marine virus	2213	Open in IMG/M
3300007345\|Ga0070752_1092988	unclassified Hyphomonas → Hyphomonas sp.	1301	Open in IMG/M
3300007346\|Ga0070753_1076908	unclassified Hyphomonas → Hyphomonas sp.	1327	Open in IMG/M
3300007346\|Ga0070753_1176285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	800	Open in IMG/M
3300008217\|Ga0114899_1052523	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300008219\|Ga0114905_1054498	Not Available	1462	Open in IMG/M
3300008219\|Ga0114905_1246256	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300008740\|Ga0115663_1071817	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300009001\|Ga0102963_1244008	Not Available	711	Open in IMG/M
3300009124\|Ga0118687_10343331	Not Available	569	Open in IMG/M
3300009414\|Ga0114909_1150980	Not Available	614	Open in IMG/M
3300009420\|Ga0114994_10401636	Not Available	907	Open in IMG/M
3300009425\|Ga0114997_10508493	Not Available	641	Open in IMG/M
3300009593\|Ga0115011_10436374	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300009593\|Ga0115011_12282378	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010148\|Ga0098043_1095683	unclassified Hyphomonas → Hyphomonas sp.	870	Open in IMG/M
3300010155\|Ga0098047_10418653	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012416\|Ga0138259_1044439	Not Available	647	Open in IMG/M
3300012920\|Ga0160423_10009719	Not Available	7555	Open in IMG/M
3300012920\|Ga0160423_10057998	Not Available	2796	Open in IMG/M
3300012920\|Ga0160423_10075654	Not Available	2402	Open in IMG/M
3300012920\|Ga0160423_11172698	unclassified Hyphomonas → Hyphomonas sp.	513	Open in IMG/M
3300017717\|Ga0181404_1011665	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300017724\|Ga0181388_1084163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	758	Open in IMG/M
3300017726\|Ga0181381_1115183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	564	Open in IMG/M
3300017726\|Ga0181381_1115338	unclassified Hyphomonas → Hyphomonas sp.	564	Open in IMG/M
3300017727\|Ga0181401_1065274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	970	Open in IMG/M
3300017728\|Ga0181419_1108121	Not Available	681	Open in IMG/M
3300017738\|Ga0181428_1139493	Not Available	567	Open in IMG/M
3300017756\|Ga0181382_1052719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1169	Open in IMG/M
3300017757\|Ga0181420_1021050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	2170	Open in IMG/M
3300017757\|Ga0181420_1156852	unclassified Hyphomonas → Hyphomonas sp.	676	Open in IMG/M
3300017758\|Ga0181409_1063463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1126	Open in IMG/M
3300017759\|Ga0181414_1037628	Not Available	1304	Open in IMG/M
3300017765\|Ga0181413_1052377	unclassified Hyphomonas → Hyphomonas sp.	1264	Open in IMG/M
3300017768\|Ga0187220_1078514	unclassified Hyphomonas → Hyphomonas sp.	995	Open in IMG/M
3300017769\|Ga0187221_1062437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1178	Open in IMG/M
3300017769\|Ga0187221_1087383	Not Available	963	Open in IMG/M
3300017772\|Ga0181430_1188003	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300017773\|Ga0181386_1054029	unclassified Hyphomonas → Hyphomonas sp.	1287	Open in IMG/M
3300017773\|Ga0181386_1123879	Not Available	798	Open in IMG/M
3300017773\|Ga0181386_1207896	unclassified Hyphomonas → Hyphomonas sp.	587	Open in IMG/M
3300017824\|Ga0181552_10063891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	2121	Open in IMG/M
3300020400\|Ga0211636_10155653	Not Available	902	Open in IMG/M
3300020401\|Ga0211617_10002298	Not Available	9304	Open in IMG/M
3300020401\|Ga0211617_10071545	Not Available	1450	Open in IMG/M
3300020410\|Ga0211699_10223584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	722	Open in IMG/M
3300020410\|Ga0211699_10301776	Not Available	624	Open in IMG/M
3300020420\|Ga0211580_10001897	Not Available	11098	Open in IMG/M
3300020424\|Ga0211620_10084431	All Organisms → Viruses → Predicted Viral	1369	Open in IMG/M
3300020460\|Ga0211486_10028240	Not Available	2731	Open in IMG/M
3300020462\|Ga0211546_10241409	Not Available	899	Open in IMG/M
3300020469\|Ga0211577_10504773	unclassified Hyphomonas → Hyphomonas sp.	732	Open in IMG/M
3300021958\|Ga0222718_10137504	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M
3300021958\|Ga0222718_10466162	unclassified Hyphomonas → Hyphomonas sp.	618	Open in IMG/M
3300021964\|Ga0222719_10072417	All Organisms → Viruses → Predicted Viral	2574	Open in IMG/M
3300021964\|Ga0222719_10639788	unclassified Hyphomonas → Hyphomonas sp.	612	Open in IMG/M
3300022227\|Ga0187827_10270998	Not Available	1108	Open in IMG/M
3300022907\|Ga0255775_1253797	Not Available	638	Open in IMG/M
3300022923\|Ga0255783_10047364	Not Available	2645	Open in IMG/M
3300022925\|Ga0255773_10009740	All Organisms → cellular organisms → Bacteria	7259	Open in IMG/M
3300022926\|Ga0255753_1075067	unclassified Hyphomonas → Hyphomonas sp.	1771	Open in IMG/M
3300022928\|Ga0255758_10209502	unclassified Hyphomonas → Hyphomonas sp.	899	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10150248	unclassified Hyphomonas → Hyphomonas sp.	1225	Open in IMG/M
3300025086\|Ga0208157_1020036	unclassified Hyphomonas → Hyphomonas sp.	2046	Open in IMG/M
3300025086\|Ga0208157_1039511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1316	Open in IMG/M
3300025086\|Ga0208157_1048209	unclassified Hyphomonas → Hyphomonas sp.	1154	Open in IMG/M
3300025097\|Ga0208010_1065211	unclassified Hyphomonas → Hyphomonas sp.	786	Open in IMG/M
3300025109\|Ga0208553_1013336	unclassified Hyphomonas → Hyphomonas sp.	2246	Open in IMG/M
3300025112\|Ga0209349_1079462	Not Available	967	Open in IMG/M
3300025118\|Ga0208790_1142002	Not Available	669	Open in IMG/M
3300025118\|Ga0208790_1152872	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300025138\|Ga0209634_1044563	All Organisms → Viruses → Predicted Viral	2233	Open in IMG/M
3300025151\|Ga0209645_1217955	Not Available	552	Open in IMG/M
3300025168\|Ga0209337_1094396	Not Available	1411	Open in IMG/M
3300025268\|Ga0207894_1052849	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	705	Open in IMG/M
3300025671\|Ga0208898_1107005	Not Available	837	Open in IMG/M
3300025759\|Ga0208899_1031623	Not Available	2469	Open in IMG/M
3300025759\|Ga0208899_1069639	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1414	Open in IMG/M
3300025853\|Ga0208645_1087053	unclassified Hyphomonas → Hyphomonas sp.	1335	Open in IMG/M
3300027686\|Ga0209071_1131972	Not Available	718	Open in IMG/M
3300027839\|Ga0209403_10231164	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300027906\|Ga0209404_10489034	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300029308\|Ga0135226_1013877	Not Available	679	Open in IMG/M
3300029309\|Ga0183683_1001328	Not Available	10269	Open in IMG/M
3300029309\|Ga0183683_1014908	unclassified Hyphomonas → Hyphomonas sp.	1782	Open in IMG/M
3300029318\|Ga0185543_1105290	unclassified Hyphomonas → Hyphomonas sp.	540	Open in IMG/M
3300029448\|Ga0183755_1005238	Not Available	6050	Open in IMG/M
3300029787\|Ga0183757_1006111	All Organisms → Viruses → Predicted Viral	3912	Open in IMG/M
3300031519\|Ga0307488_10003871	Not Available	12470	Open in IMG/M
3300031569\|Ga0307489_10277885	Not Available	1074	Open in IMG/M
3300031647\|Ga0308012_10002944	Not Available	8263	Open in IMG/M
3300031659\|Ga0307986_10448649	Not Available	505	Open in IMG/M
3300031785\|Ga0310343_10588668	Not Available	826	Open in IMG/M
3300032006\|Ga0310344_10579547	Not Available	961	Open in IMG/M
3300032820\|Ga0310342_103450455	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300034418\|Ga0348337_015057	All Organisms → cellular organisms → Bacteria → Proteobacteria	4174	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.48%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	37.88%
Unclassified	Environmental → Aquatic → Marine → Unclassified	18.94%
Coastal	Environmental → Aquatic → Marine → Coastal	17.42%
Strait	Environmental → Aquatic → Marine → Strait	15.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.55%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.27%
Inlet	Environmental → Aquatic → Marine → Inlet	0.76%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.76%
Harbor	Environmental → Aquatic → Marine → Harbor	0.76%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	18.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.42%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	15.15%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.55%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.55%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.76%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.76%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	25.76%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	15.15%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.39%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.55%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.03%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.03%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.03%
Marine Water	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water	2.27%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.52%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.52%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.76%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.76%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.76%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.76%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.76%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001945	Marine microbial communities from Galapagos, Equador - GS026	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004829	Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs	Environmental	Open in IMG/M
3300004951	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006404	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008740	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012416	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029308	Marine harbor viral communities from the Indian Ocean - SRB2	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031647	Marine microbial communities from water near the shore, Antarctic Ocean - #179	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24005J15628_100178211	3300001589	Marine	KLHKTVSEILQMSVDEFNMWLAYFQIQNDEHERQQRLAKAQR*
JGI24005J15628_100319681	3300001589	Marine	IFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR*
GOS2241_10148942	3300001945	Marine	LHNIFGLAEKLHKSASEILQMPVYEFNMWIAYFDLQKEEQDRQERIARARRGN*
KVRMV2_1001363043	3300002231	Marine Sediment	LHKTVSEILQMSVTEFNMWMAYFDLKKEEQDRQNRIAQMKRK*
JGI25130J35507_10942402	3300002519	Marine	HNIFSLAERLHKSASEILQMSVYEFNMWCAYFDLQREEQERQQRINKMKR*
Ga0066222_11275492	3300004460	Marine	LHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYFKLQSEEQERQNRIMKAGR*
Ga0068515_1064551	3300004829	Marine Water	ELHNVFGLAEKLHKTVAEILQMSVYEFNMWLAYFSLQSDERDRQERLARAKR*
Ga0068515_1074642	3300004829	Marine Water	ELHNVFGLAEKLHKTVAEILQMSVYEFNMWLAYFSLQSDERNRQERLAKAKR*
Ga0068515_1158442	3300004829	Marine Water	LHSLLALAEKLHKTLSEILQISVTEFNMWIAYYDLKKEESERQERINQMKR*
Ga0068513_10347731	3300004951	Marine Water	FGLAEKLHKTVAEILQMSVYEFNMWLAYFSLQSDERDRQERLARAKR*
Ga0066827_103231591	3300005509	Marine	KNNPEVYSVFALAERLHKTASEILQMPIYEFNMWCAYFDLQREDQERQQRINKSKR*
Ga0075466_10283961	3300006029	Aqueous	LYNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFDIQNEQRKK*
Ga0075446_100098672	3300006190	Marine	LHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR*
Ga0099675_15394802	3300006334	Marine	LHNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFEIQNEERERQERLERARR*
Ga0075448_101790512	3300006352	Marine	KLNSDPELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR*
Ga0075515_108445012	3300006404	Aqueous	MILKRIKKKLKNDPELHNLFGLAEKLHKSVSEILQMTVSEFNMWIAYYSLQSDERERQE
Ga0100228_10580001	3300006565	Marine	LHKTVAEIMLMSVEEFNLWLAYFNLQKEEHDRQERLAKAR*
Ga0098037_10167731	3300006737	Marine	RNNVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQNEERERQERLAKAQR*
Ga0098037_10224791	3300006737	Marine	RNNVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR*
Ga0098037_10887821	3300006737	Marine	KKLRNDVELHNIFGLAEKLHKTVSEILQMSVYEFNMWLAYFQIQIDERERQERLAKAR*
Ga0098058_10156991	3300006750	Marine	NNPELHNIFSLAERLHKSASEILQMSVYEFNMWCAYFDLKREDQERQERINKMKR*
Ga0098058_11298741	3300006750	Marine	NNPELHNIFSLAERLHKSASEILQMSVYEFNMWCAYFDLQREERERQERINKAKR*
Ga0098058_11620773	3300006750	Marine	MIQFRHLKKKIKNNPELHNIFSLAERLHKSASEILQMSVYEFNMWCAYYDLQREDLEKQQ
Ga0098044_11071921	3300006754	Marine	KKIKNTAEVYSIFALAETLHKTASEILQMSVSEFNMWIAYFDLKKEEQERQNRIAQMKRR
Ga0098044_11889001	3300006754	Marine	KKIKNSTEVHNLFALAEKLHKTLSEILQMSVTEFNMWLAYFDLKREEQDRQERLNQMKK*
Ga0098055_10316442	3300006793	Marine	VAEILQMSVQEFNMWIAYFGLQNDERERQERIIKARR*
Ga0070749_100992402	3300006802	Aqueous	VSEILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0070754_100414343	3300006810	Aqueous	LAEKLHKSVSEILQMSVSEFNMWIAYYSLQNDERERQERLAKARR*
Ga0070754_101141322	3300006810	Aqueous	EKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0070750_102446962	3300006916	Aqueous	SEILQMSVTEFNMWIAYYDLKHEESERQQRIAQMKRR*
Ga0070746_101031361	3300006919	Aqueous	KSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0070746_101077061	3300006919	Aqueous	KKLKSDPELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYSLQSDERERQERLARARR*
Ga0070746_102480461	3300006919	Aqueous	ILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0098060_11449551	3300006921	Marine	IMGTGNEDIEDYKKLKSDTELHNIYGLAERLHKTVSEILQMSVEEFNMWIAYFQIQQEERERQERLAKASR*
Ga0070745_10268543	3300007344	Aqueous	SVSEILQMSVSEFNMWIAYYSLQSDERERQERLARARR*
Ga0070745_10329743	3300007344	Aqueous	DPELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYSLQNDERERQERLAKARR*
Ga0070752_10929882	3300007345	Aqueous	SEILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0070753_10769082	3300007346	Aqueous	AEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR*
Ga0070753_11762852	3300007346	Aqueous	PELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYSLQSDERERQERLARARR*
Ga0114899_10525231	3300008217	Deep Ocean	AERLHKSASEILQMSVYEFNMWCAYFDLQREDQERQERINKSKR*
Ga0114905_10544982	3300008219	Deep Ocean	RLHKTASEILQMSVYEFNMWCAYFDLQREDQERQQRINKMKR*
Ga0114905_12462561	3300008219	Deep Ocean	ALAERLHKSASEILQMSVYEFNMWCAYFDLQREDRERQERINKMKR*
Ga0115663_10718171	3300008740	Marine	AEVYSIFALAETLHKTASEILQMSVSEFNMWIAYFGLKKEEQDRQNRIAQMKRR*
Ga0102963_12440083	3300009001	Pond Water	MFGLAEKLHKTVSEILQMSVTEFNMWMAYYKLQTEEQERQHRLMKARRGN*
Ga0118687_103433311	3300009124	Sediment	EILQMSVSEFNMWIAYFALQSDERERQERLARARR*
Ga0114909_11509802	3300009414	Deep Ocean	MYSVFALAEQLHKTASEILQMSVSEFNMWIAYFDLKKEEQERLHRIAQMKRR*
Ga0114994_104016361	3300009420	Marine	AEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR*
Ga0114997_105084931	3300009425	Marine	KLNSDPELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYFKLQSEEQERQNRIMKAGR*
Ga0115011_104363742	3300009593	Marine	MYSVFALAEQLHKTASEILQMSVSEFNMWIAYFDLKKEEQERQNRIAQMKRK*
Ga0115011_122823782	3300009593	Marine	LQMPVQEFNMWMAYFDLKKNEQERQNRIAQMKKR*
Ga0098043_10956831	3300010148	Marine	KLHKTVSEILQMSVYEFNMWLAYFQIQSDEIERQQRLAKAQR*
Ga0098047_104186532	3300010155	Marine	SLAERLHKSASEILQMSVYEFNMWCAYFDLQREERERQERINKAKR*
Ga0138259_10444391	3300012416	Polar Marine	LHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMK
Ga0160423_100097191	3300012920	Surface Seawater	NIFSLAEKLHKTVAEILQMTVDEFNMWIAYYQIQNEERDRQERIARAKSGK*
Ga0160423_100579983	3300012920	Surface Seawater	EKLHKTVSEILQMSVVEFNMWLAYFNLQNEERERQERIAKMKR*
Ga0160423_100756541	3300012920	Surface Seawater	NNAELHNIFGLAERLKKTVAEILEMSVDEFYLWIAYYEIQNEEKERQERLERARK*
Ga0160423_111726981	3300012920	Surface Seawater	LHNIFALGEKLHKTLPEILQMSVYEFNMWMAYFTLQQEEKERQDRLAKAKR*
Ga0181404_10116651	3300017717	Seawater	EKNSSEIYSVFALAERLHKTAFEILQMSVQEFNMWIAYYDLQREESERQQRINQMKR
Ga0181388_10841631	3300017724	Seawater	LAEKLHKTVSEILQMTVNEFTMWQAYFQLQNEERERQERIAKAK
Ga0181381_11151831	3300017726	Seawater	AELHNIFFLAEKLHKTVSEILQMSVDEFTMWQAYFQLQNDERERQERIAKAR
Ga0181381_11153381	3300017726	Seawater	KLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR
Ga0181401_10652742	3300017727	Seawater	HNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0181419_11081211	3300017728	Seawater	KKLRNNVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQNDEHERQQRLAKAQR
Ga0181428_11394932	3300017738	Seawater	NNVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQNDERERQERLAKAQR
Ga0181382_10527192	3300017756	Seawater	VSEILQMSVDEFNMWLAYFQIQSDERERSERLAKAQR
Ga0181420_10210502	3300017757	Seawater	HNNIGLVEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERSERLAKAQR
Ga0181420_11568522	3300017757	Seawater	HNNIGLVEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR
Ga0181409_10634631	3300017758	Seawater	ELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYFGLQSDERERQERIIKARR
Ga0181414_10376281	3300017759	Seawater	KTVSEILQMSVDEFNMWLAYFQIQNDERERQERLAKAQR
Ga0181413_10523771	3300017765	Seawater	ELHNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFEIQNEERQKQERLERAKR
Ga0187220_10785142	3300017768	Seawater	EKLHKTVSEILQMSVDEFNMWLAYFQIKSDEIERQQRITKAQR
Ga0187221_10624372	3300017769	Seawater	HKTVSEILQMSVDEFNMWLAYFQIQSDERERSERLAKAQR
Ga0187221_10873831	3300017769	Seawater	NIFGLAEKLHKTVFEILQMSVYEFNMWLAYFQIKSDERERQERLAKAQR
Ga0181430_11880032	3300017772	Seawater	LLALAEKLHKTLSEILQMSVTEFNMWCAYYDLQKEESERQQRINQMKR
Ga0181386_10540291	3300017773	Seawater	KLKNNVELHNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFEIQNEERQRQERLERARR
Ga0181386_11238791	3300017773	Seawater	VVAEKLHKTISEILQMSVAEFNMWIAYFELQIEERKKQEQLHRMKK
Ga0181386_12078961	3300017773	Seawater	LHNIFSLAEKLHKTVSEILQMSVYEFNMWLAYFQIQSDEIERQQRLAKAQR
Ga0181552_100638911	3300017824	Salt Marsh	KLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0211636_101556533	3300020400	Marine	LHNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFEIQNEERERQERLERARR
Ga0211617_100022986	3300020401	Marine	LHNIFSLAEKLHKSVSEILEMTVDEFNMWIAYFSLQSEEQDRQMRIAKARRGN
Ga0211617_100715453	3300020401	Marine	VFAVAEKLHKTVEEILQMSVFEFNMWIAYFDLQNDEIKRQQQLAKMKK
Ga0211699_102235842	3300020410	Marine	EKLHKSVSEILQMSVEEFTMWIAYFELQNQEQEKQIRLAKAQR
Ga0211699_103017761	3300020410	Marine	KKIKNNAEVYSIFALAETLHKTASEILQMSVSEFNMWIAYFDLKKEEQERQNRIAQMKRR
Ga0211580_100018971	3300020420	Marine	GLAEKLHKTVSEILQMSVEEFNMWIAYFQIQQEERERQERLAKASR
Ga0211620_100844313	3300020424	Marine	VFAVAEKLHKTVEEILQMSVFEFNMWIAYFDLQNDEIKRQQQLARMKK
Ga0211486_100282401	3300020460	Marine	FAVAEKLHKTVEEILQMSVFEFNMWIAYFDLQNDEIKRQQQLARMKK
Ga0211546_102414092	3300020462	Marine	VAEKLHKTISEILQMSVAEFNMWIAYFELQIEERKKQEQLHRMKK
Ga0211577_105047731	3300020469	Marine	EILQMSVDEFNMWLAYFQIKSDEIERQQRITKAQR
Ga0222718_101375041	3300021958	Estuarine Water	MFGLAEKLHKTVSEILQMSVTEFNMWMAYYKLQTEEQERQHRL
Ga0222718_104661622	3300021958	Estuarine Water	LKNDPELHNIFGLAEKLHKTVSEILQMSVTEFNMWMAYYKLQTEEQERQHRLMKARRGN
Ga0222719_100724172	3300021964	Estuarine Water	MFGLAEKLHKTVSEILQMSVTEFNMWMAYYKLQTEEQERQHRLMKARRGN
Ga0222719_106397882	3300021964	Estuarine Water	LYNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFDIQNEQRKK
Ga0187827_102709982	3300022227	Seawater	IFSLAERLHKSASEILQMSVYEFNMWCAYFDLQREDRERQERINKMKR
Ga0255775_12537972	3300022907	Salt Marsh	KKLKSDPELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0255783_100473643	3300022923	Salt Marsh	PELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0255773_100097401	3300022925	Salt Marsh	SEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0255753_10750671	3300022926	Salt Marsh	LAEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0255758_102095021	3300022928	Salt Marsh	TVSEILQMTVSEFNMWMAYYALQNAERERQERLARARR
(restricted) Ga0233432_101502482	3300023109	Seawater	DVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR
Ga0208157_10200361	3300025086	Marine	KKLRNDVELHNIFGLAEKLHKTVSEILQMSVYEFNMWLAYFQIQIDERERQERLAKAR
Ga0208157_10395111	3300025086	Marine	GLAEKLHKTVAEILQMSVQEFNMWIAYFGLQNDERERQERIIKARR
Ga0208157_10482092	3300025086	Marine	EKLHKTVSEILQMSVYEFNMWLAYFQIQSDEIERQQRLAKAQR
Ga0208010_10652112	3300025097	Marine	LYNIFALADRLHKTASEILQMPVYEFNMWCAYYDLQREDQERQERINKMKR
Ga0208553_10133362	3300025109	Marine	TKLYRHLKKIKNNPSLYNIFALADRLHKTASEILQMPVYEFNMWCAYYDLQREDQERQERINKMKR
Ga0209349_10794621	3300025112	Marine	VYSIFALAERLHKSASEILQMSVYEFNMWCAYFDLQREDRERQERINKMKR
Ga0208790_11420021	3300025118	Marine	IKNSTEVHNLFALAEKLHKTLSEILQMSVTEFNMWLAYFDLKREEQDRQERLNQMKK
Ga0208790_11528722	3300025118	Marine	NPELHNIFSLAERLHKSASEILQMSVYEFNMWCAYFDLQREDRERQERINKMKR
Ga0209634_10445632	3300025138	Marine	LRNDVELHNIFGLAEKLHKTVSEILQMSVDEFNMWLAYFQIQSDERERQERLAKAQR
Ga0209645_12179551	3300025151	Marine	SEILQMSVEEFNMWIAYFQIQNEERERQERLAKASR
Ga0209337_10943961	3300025168	Marine	SEILQMSVDEFNMWLAYFQIQSEERERQQRLAKAQR
Ga0207894_10528492	3300025268	Deep Ocean	IFALAERLHKSASEILQMPVYEFNMWCAYFDLQREDQERQQRINKSKR
Ga0208898_11070051	3300025671	Aqueous	VELHNLFGLAEKLHKSVSEILQMSVSEFNMWIAYYSLQNDERERQERLAKARR
Ga0208899_10316233	3300025759	Aqueous	SEILQMSVTEFNMWIAYYDLKHEESERQQRIAQMKRR
Ga0208899_10696392	3300025759	Aqueous	KLKNNVELYNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFDIQNEQRKK
Ga0208645_10870531	3300025853	Aqueous	GLAEKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR
Ga0209071_11319721	3300027686	Marine	KLNSDPELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR
Ga0209403_102311642	3300027839	Marine	ELYSIFALAERLHKTASEILQMSVQEFNMWLAYYDLQREDSERQNRINQMKR
Ga0209404_104890341	3300027906	Marine	LAETLHKTASEILQMSVSEFNMWIAYFDLKKEEQERQNRIAQMKRK
Ga0135226_10138772	3300029308	Marine Harbor	KKLKKNHELHNIFGLAEKLHKTVAEILQMSVYEFNMWLAYYSLQSDERQRQERLAKAKR
Ga0183683_10013283	3300029309	Marine	LAEKLHKSVSEILEMTVDEFNMWIAYFSLQSDEQDRQMRIAKARRGN
Ga0183683_10149083	3300029309	Marine	IFGLAEKLHKTVDEILQMSVEEFNMWIAYFQIQNEERERQERLAKAR
Ga0185543_11052901	3300029318	Marine	NIFGLAEKLHKTVAEILEMSVDEFYLWIAYYEIQSEQKERQQRLERARR
Ga0183755_10052381	3300029448	Marine	LAEKLHKTVSEILQMSVDEFNMWLAYFQIQNDERERQERLAKAQR
Ga0183757_10061112	3300029787	Marine	LHNIFGLAEKLHKTVAEILEMSVDEFYLWVAYFEIQNEERQRQERLERARR
Ga0307488_1000387114	3300031519	Sackhole Brine	KLHKTVAEILQMSVQEFNMWIAYFKLQSEEQERQNRIMKAGR
Ga0307489_102778854	3300031569	Sackhole Brine	LHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYFKLQSEEQERQNRIMKAGR
Ga0308012_100029447	3300031647	Marine	SDPELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR
Ga0307986_104486491	3300031659	Marine	PELHNLFGLAEKLHKTVAEILQMSVQEFNMWIAYYKLQSEEQERQNRIMKAGR
Ga0310343_105886683	3300031785	Seawater	LHNIFGLAEKLHKSASEILQMPVYEFNMWIAYFDLQKEEQDRQERIARARRGN
Ga0310344_105795472	3300032006	Seawater	LAEVLHKTASEILQMSVTEFNMWIAYFELRKEEEERQNRIAQMKRR
Ga0310342_1034504552	3300032820	Seawater	KIKNNPELHNIFSLAERLHKSASEILQMSVYEFNMWCAYFDLQREERERQERINKAKR
Ga0348337_015057_1_132	3300034418	Aqueous	EKLHKSVSEILQMSVSEFNMWIAYYALQSDERERQERLARARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters