Metagenome Family F061039

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061039
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	103 residues
Representative Sequence	MAEQQTATCRECSRTISPEDTIVFGDGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCTRRFPLREVASLDSFGIRTYVCGWCHTDLTDSIRAHLYGCAM
Number of Associated Samples	98
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.46 %
% of genes near scaffold ends (potentially truncated)	79.55 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.848 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.273 % of family members)
Environment Ontology (ENVO)	Unclassified (34.848 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.80% β-sheet: 16.54% Coil/Unstructured: 61.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF04392	ABC_sub_bind	3.03
PF12836	HHH_3	2.27
PF00528	BPD_transp_1	2.27
PF00072	Response_reg	1.52
PF12867	DinB_2	1.52
PF12911	OppC_N	0.76
PF13551	HTH_29	0.76
PF08734	GYD	0.76
PF09900	DUF2127	0.76
PF08327	AHSA1	0.76
PF14534	DUF4440	0.76
PF01799	Fer2_2	0.76
PF09723	Zn-ribbon_8	0.76
PF13450	NAD_binding_8	0.76
PF00378	ECH_1	0.76
PF13683	rve_3	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.03
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.85 %
Unclassified	root	N/A	15.15 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	77.27 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	77.27 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	77.27 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	77.27 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	77.27 %
Unclassified	root	N/A	15.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12147472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300000955\|JGI1027J12803_106031375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1766	Open in IMG/M
3300004268\|Ga0066398_10198777	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300004479\|Ga0062595_102590763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300005171\|Ga0066677_10119555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1415	Open in IMG/M
3300005177\|Ga0066690_10023580	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300005177\|Ga0066690_10031072	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300005179\|Ga0066684_10225948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1220	Open in IMG/M
3300005180\|Ga0066685_10991279	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300005180\|Ga0066685_11100439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300005181\|Ga0066678_10241743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1165	Open in IMG/M
3300005332\|Ga0066388_108581522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300005445\|Ga0070708_100831942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300005447\|Ga0066689_10651285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300005471\|Ga0070698_100251909	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300005540\|Ga0066697_10146800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1392	Open in IMG/M
3300005558\|Ga0066698_10078607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2141	Open in IMG/M
3300005559\|Ga0066700_10034298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2999	Open in IMG/M
3300005561\|Ga0066699_11260241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300005568\|Ga0066703_10529715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300005568\|Ga0066703_10716839	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300005569\|Ga0066705_10256354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1109	Open in IMG/M
3300005586\|Ga0066691_10763426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300005598\|Ga0066706_10350100	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1171	Open in IMG/M
3300005713\|Ga0066905_100000846	All Organisms → cellular organisms → Bacteria → Proteobacteria	9587	Open in IMG/M
3300005713\|Ga0066905_101285984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300005713\|Ga0066905_101793650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300005764\|Ga0066903_102222014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1058	Open in IMG/M
3300005764\|Ga0066903_107406097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300006034\|Ga0066656_10514985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300006194\|Ga0075427_10019047	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300006796\|Ga0066665_11219794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300006796\|Ga0066665_11460148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300006797\|Ga0066659_10976149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300006852\|Ga0075433_11818061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300006880\|Ga0075429_100955454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300006903\|Ga0075426_11324765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300006969\|Ga0075419_11210058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300007076\|Ga0075435_100331371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1304	Open in IMG/M
3300009012\|Ga0066710_102230690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	798	Open in IMG/M
3300009089\|Ga0099828_10770754	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	862	Open in IMG/M
3300009094\|Ga0111539_13409541	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300009100\|Ga0075418_11151758	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	840	Open in IMG/M
3300009100\|Ga0075418_12154675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	608	Open in IMG/M
3300009137\|Ga0066709_104454303	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300009147\|Ga0114129_12793998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300009162\|Ga0075423_11346416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300009162\|Ga0075423_12114775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300009162\|Ga0075423_12154585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300009792\|Ga0126374_10908613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300009792\|Ga0126374_11159742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300009795\|Ga0105059_1066691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300009804\|Ga0105063_1074233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532	Open in IMG/M
3300010046\|Ga0126384_11365155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300010047\|Ga0126382_12339676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300010048\|Ga0126373_11869569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300010304\|Ga0134088_10323278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300010336\|Ga0134071_10694396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300010359\|Ga0126376_10086396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2349	Open in IMG/M
3300010359\|Ga0126376_11806832	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300010362\|Ga0126377_12542880	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300010362\|Ga0126377_12876796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300010366\|Ga0126379_10819443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1030	Open in IMG/M
3300010366\|Ga0126379_10888521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300010376\|Ga0126381_100748543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1400	Open in IMG/M
3300010376\|Ga0126381_104883072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300010398\|Ga0126383_10315369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1569	Open in IMG/M
3300010398\|Ga0126383_13453056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300011270\|Ga0137391_10643676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300012198\|Ga0137364_10881359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300012199\|Ga0137383_10595015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300012200\|Ga0137382_10577635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	802	Open in IMG/M
3300012353\|Ga0137367_10464481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	893	Open in IMG/M
3300012357\|Ga0137384_10945898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300012358\|Ga0137368_10227580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1305	Open in IMG/M
3300012361\|Ga0137360_10369989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1203	Open in IMG/M
3300012361\|Ga0137360_11289957	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300012362\|Ga0137361_11009044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300012685\|Ga0137397_10206344	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1462	Open in IMG/M
3300012685\|Ga0137397_10829671	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300012917\|Ga0137395_10804995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300012944\|Ga0137410_11205513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300012948\|Ga0126375_10459851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300012948\|Ga0126375_11048471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300012971\|Ga0126369_10368052	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1465	Open in IMG/M
3300012971\|Ga0126369_10522425	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300012976\|Ga0134076_10466343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300014154\|Ga0134075_10306408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300017659\|Ga0134083_10290529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300018053\|Ga0184626_10318025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300018431\|Ga0066655_11266377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300018468\|Ga0066662_11381537	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300025910\|Ga0207684_10106405	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300025910\|Ga0207684_10953878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300025922\|Ga0207646_10278313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1512	Open in IMG/M
3300025923\|Ga0207681_10248854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1387	Open in IMG/M
3300026309\|Ga0209055_1016056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3724	Open in IMG/M
3300026313\|Ga0209761_1021867	All Organisms → cellular organisms → Bacteria	3986	Open in IMG/M
3300026313\|Ga0209761_1331853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300026325\|Ga0209152_10075835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1227	Open in IMG/M
3300026326\|Ga0209801_1184025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	855	Open in IMG/M
3300026332\|Ga0209803_1017431	All Organisms → cellular organisms → Bacteria	3617	Open in IMG/M
3300026335\|Ga0209804_1025177	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300026335\|Ga0209804_1164406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	979	Open in IMG/M
3300026524\|Ga0209690_1089461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1281	Open in IMG/M
3300027748\|Ga0209689_1044910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2515	Open in IMG/M
3300031740\|Ga0307468_100957726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300031740\|Ga0307468_101433280	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300031747\|Ga0318502_10587995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300031890\|Ga0306925_12095256	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300031954\|Ga0306926_10124165	All Organisms → cellular organisms → Bacteria → Proteobacteria	3185	Open in IMG/M
3300032090\|Ga0318518_10291207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.61%
Host-Associated	Host-Associated	14.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.85%
Plants	Host-Associated → Plants	14.39%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.88%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_121474721	3300000789	Soil	MAEQQTATCPQCSQPLSPEDTIVFGHGRLGHLHCRRPRVLSAEERTVLFIYCRDHIVAKCVDCGRQSYLREVASLDSVGIRSRGCPWCRADLTDSIRAHLYG
JGI1027J12803_1060313753	3300000955	Soil	MAEQQTATCPQCSQPLSPEDTIVFGHGRLGHLHCRRPRVLSAEERTVLFIYCRDHIVAKCVDCGRQSYLREVASLDSVGIRSRGCPWCRADLTDSIRAHLYGCAMLPEE
Ga0066398_101987771	3300004268	Tropical Forest Soil	MTDPLTATCPQCLQPISPEDTIVYGFGVLGHLDCRRPRVLSADERTLPFIYCRDHPVAQCVRCTVNFYLREIASLDQFSIRSHECPWCYADMTDSIRTHVYGCALVPAKVRRRAQAARDAARSLVKR
Ga0062595_1025907631	3300004479	Soil	MADQQTATCPECSQMISPEDTIVFGHGRLGHLDCRRPRVLSDEERTALFIYCRDHTVAQCLRCGEQFQLRQVTSLDSVGIRSYTCPWC
Ga0066677_101195552	3300005171	Soil	MAEQQTATCRECSRTISPGDTLVFGYGRLGHLVCRRPRVLSAEERTLAFLYCRDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDSIRAHLY
Ga0066690_100235801	3300005177	Soil	MAEQQTATCPECSRTISPGDTIVFGHGRLGHLVCRRPRVLSAEERTLLLIYFGTTQSLSAFVAQEFHLREVASIDQFGIRSHGCPWCHTDLTDSIRAHLYGCAMLPV
Ga0066690_100310724	3300005177	Soil	MAEPQTATCPQCSLTISPEDTIVFGFGILGHLDCRQPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGC
Ga0066684_102259481	3300005179	Soil	MTEQQTATCPECSRTISPEDTIIFGFGIVGHLDCRRPRVLSAEERTLLFVYCRDHPVAECVRCAVKFHLREIASIGQFDIRSHGCLLCHTDLTDGIRAHLYGCAMLPV
Ga0066685_109912791	3300005180	Soil	MAEQQTATCRECSRTISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFIHCRDHQVAECVGCTGRFYLREVTSLDLGVRAYKCPWCHTDLTDSIRAHL
Ga0066685_111004391	3300005180	Soil	MAEQQTATCPECSRTISPGTIVFGHGLLGHLNCRRPRVLSAEERTLLFHPLSGHQFAECVGSTGRFYLREVTSLDLGVRAYKCPWCHTDLTDSIRAHLYG
Ga0066678_102417433	3300005181	Soil	MAEPQTATCPQCSLTISPEDTIVFGFGILGHLDCRQPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCSR
Ga0066388_1085815221	3300005332	Tropical Forest Soil	MAEQQTATCPQCSRMISPEDTIVFGRGRLGHLDCRRPRVLSAEERTLALLYCGDHEVAECATCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDRIRAHLYGCAMLPAEVRRRAQVTR
Ga0070708_1008319421	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAEQQTATCPECSQMISPEDTIVVGFGLLGHLDCRRPRVLSAEERILLVIYCRDHQVAECVGCTRTFHLREVASLDLGVRVYKCPWRHMDLTDSIRAHLYGCAMLPAEVRYRAR
Ga0066689_106512851	3300005447	Soil	MAEQQPATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREVASLDLGVRSYKCPWCHTDLTDSIRAHLYG
Ga0070707_1022739781	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MISPEDTIVFGYGLLGHLDCRRPRVLSAEERILLVIYCRDHQVAECVGCTRTFHLREVASLDLGVRLYKCPWCHMDLTD
Ga0070698_1002519091	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAEQQIATCPECSRTISPEDTIVFGYGLLGHLDCLRPRVLSAEERVLLVIYCRDHQVAECVRCTRRFHLREVASLDLGVRSYKCPWCHMDLTDSIRAHLYAVRCCQRKSDTGRVRRVRRREAW*
Ga0070698_1011347331	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAEQQTATCPECSQMISPEDTIVFGYGLLGHLDCRRPRVLSAEERILLVIYCRDHQVAECVGCTRTFHLREVASLDLGVRSD*
Ga0066697_101468003	3300005540	Soil	MTEQQTATCPECSRTISPEDTIIFGFGIVGHLDCRRPRVLSAEERTLLFVYCRDHPVAECVRCAVKFHLREIASIGQFDIRSHGCLLCHTDL
Ga0066701_101301024	3300005552	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCTRT*
Ga0066698_100154401	3300005558	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCSRLL
Ga0066698_100786074	3300005558	Soil	MAEQQTATCPECSRTISPEDTIVFDFGLLGHLDCRRPRVLSTEERTLLFIYCYCRDHQVAECVRCAGRFHLREVASLDLGVRSYG*
Ga0066700_100342981	3300005559	Soil	MAEQQPATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREVASLDLGVRSYKCPWCHTDLTDSIRAHL
Ga0066699_112602411	3300005561	Soil	VEPPPWICPTCARTISPEDTIVFGFGHLGHLDCHRPRVLSAEERILLVIYCRDHQVAECVGCTRRLRLREVASLDLGVRSYKCPWCHTDLTDSIRTHLYGCAMLPGEVRYRARAAREAARSLVKQ
Ga0066703_105297152	3300005568	Soil	MAEQQPATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREVASLDLGGRSYKCPWCHTDLTDSIRAHLYG
Ga0066703_107168392	3300005568	Soil	MAEQQTATCRECSRTISPEDTIVFGDGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCTRRFPLREVASLDSFGIRTYVCGWCHTDLTDSIRAHLYGCAM
Ga0066705_102563545	3300005569	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCAGKFRLREVVSIDQFGIRSHACPWCHTDLTDSIRAHLDGCAMLPVE
Ga0066691_107634262	3300005586	Soil	MTEQQTATCPECSRTISPEDTIIFGFGIVGHLDCRRPRVLSAEERTLLFVYCRDHPVAECVRCAVKFHLREIASIGQFDIRSHGCLLCHTDLT
Ga0066706_103501001	3300005598	Soil	MADQQTATCPECSRTISPEDTIVFRFGILGHLECRRPRVLSAEERTLLFIYCRDHSVAECVRCSRKFHLREVVSIDQFGIRSHGCPWCHTDLSDGIRAHLYGCAMLPIAIRRIAQA
Ga0066905_1000008461	3300005713	Tropical Forest Soil	MISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLAFLYCQDHEVAECSSCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRA
Ga0066905_1012859841	3300005713	Tropical Forest Soil	MAEPQTATCPHCSRMISQEDTLVFGSGRLGHLDCRRPRVLSAEERTLALLYCHDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDTIRAHLYGCAM
Ga0066905_1017936501	3300005713	Tropical Forest Soil	MADPQIATCPQCSQPISPEDTLVFGHGRLGHLDCRRPRVLSAEERTVLFIYCGDHIVTKCVRCGRQLHLREVASLDSVGVRSFACPWCHVDLTDSIREHLYGCAM
Ga0066903_1022220142	3300005764	Tropical Forest Soil	MPERQTATCPQCSRMIAPEDTIVFGHGILGHLDCRRPRVLSAEERTIALLYCHDHDVAQCSTCTRRFRLRELVSQDQFGVRLHACPWC
Ga0066903_1074060971	3300005764	Tropical Forest Soil	MAEQQTATCPECCRIILPEDTIIFGYGRLGHLDCRQPRILSAEERTVLFTYCRDHVVAQCVRCGEQFHLREVSSLDSVGIRSHACPRCHADLTASIRAHLYGCALLPAEVRRRAQAARDA
Ga0066656_105149851	3300006034	Soil	VAEQRTATCPECSRTISPEDTIVFDFGLLGHLDCRRPRVLSTEERTLLFIYCYCRDHQVAECVRCAGRFHLREVASLDLGVRSYGCPWCHTDLTDSI
Ga0075427_100190471	3300006194	Populus Rhizosphere	MEQQGRTCPQCSQVISPEDTIVFGYGRLGHLNCRRPRVLSAEELTLLLIYCRDHPVAECVRCTGTFHLREVVSRDSVGIRSYGCPWCHTDLTENIRAHLYSCALLPGEVRR
Ga0066665_112197942	3300006796	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFVYCRDHPVAECVRCAVKFHLREIASIGQFDIRSHGCLLCHTDLTAGIRAHLYGCAMLP
Ga0066665_114601481	3300006796	Soil	MAEQQTATCPECSRTISPGDTLVFGYGRLGHLDCRRPRVLSAEERTLLFLYCRDHPVAECIRCAGKFHLREVASIDQFGIRSHGCPWCHTDLTDSIRAHLYGC
Ga0066659_109761491	3300006797	Soil	MAEQQTATCPECSRTISPGDTIVFGHGRLGHLVCRRPRVLSAEERTLLLIYFGTTQSLSAFVAQEFHLREVASIDQFGIRSHGCPWLRIPAIMIGQWAIVITRSGDRD
Ga0075428_1002253271	3300006844	Populus Rhizosphere	MMNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECSTCLRQFFLREIASLDRF
Ga0075428_1012243641	3300006844	Populus Rhizosphere	MISPEDTIVFGHGRLGHLDCRRPRVLSDEERTALFIYCRDHTVAQCLRCGEQFQLRQVTSLDSV
Ga0075430_1011060161	3300006846	Populus Rhizosphere	MAEPLTATCPQCSRMIAPEDTIVFGHGRLGHLDCRRPRVLSAEERMILFTYCRDHPVGECVRCARWFHLRDVASIDSFGIRT
Ga0075433_118180611	3300006852	Populus Rhizosphere	MNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPNHKIAECSTCLRQFFLREIASLDRFGVRLHVCPHCHADLTDSIRAHLYG
Ga0075429_1009554542	3300006880	Populus Rhizosphere	MAEPLTATCPQCSRMIAPEDTIVFGHGRLGHLDCRRPRVLSAEERMILFTYCRDHPVGECVRCARWFHLRDVASIDSFGIRTYSCPWCHTDPTDSI
Ga0068865_1007333422	3300006881	Miscanthus Rhizosphere	MEQRGWTCPECSRTISPEDTFIVGLGRLGHLSCRRPRVLSAEEHALLSIYCRDHPVAECVRCTGKFRLREVA
Ga0075426_113247652	3300006903	Populus Rhizosphere	MMNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECSTCLRQFFLREIASLDRFGVRLHVCPHCHADL
Ga0075419_112100581	3300006969	Populus Rhizosphere	MERQQQSCPKCSRTISPDDTIVFGRWVLGHLDCRRPRVLGAEESTLLYIYCRDHHVAECVRCGGRFALREVATVDSFGVRTYGCPRCHTDLTDSIRAHLYGC
Ga0075435_1003313713	3300007076	Populus Rhizosphere	VLSSRRLPFSGGGPTMEQQRRTCPQCSRTISPDDTIVFGYGRLGHLDCRRPRLLSTEERTLLLIFCRDHQVAECVRCAGRFHLQEVASRDSFGVHTHRCPQCHTDLTDRLRAHLYGCAILPVEVRRRAQAAREAARSW*
Ga0066710_1002919661	3300009012	Grasslands Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASID
Ga0066710_1022306901	3300009012	Grasslands Soil	MAEQQTATCPHCSRMLSPEDTIVFGYGLLGHLNCRRPRVLSAEECTLLFIYCRDHQVAECVRCTGKFRLGEVASLDPFGIRSHGCPWCHTDLTDSIRAHLYGCAMLPAEVRRRAQTAREATRSLVQSL
Ga0099828_107707543	3300009089	Vadose Zone Soil	MAEQQTATCPQCSWMISPEDTIVFGYGLLDHLDCRRPRVLSAEERTLLFVYCREHQVAECFTCTGNSACASLPHRICSASALHVCPWCRGDLTDSVRVHLYGCVTLP
Ga0111539_134095411	3300009094	Populus Rhizosphere	MERQEPSCPNCSRTISPDDTIVFGYGRLGHLDCRRPRLLSTEERTLLLIFCRDHRVAECVRCAGRFHLQEVASRDSFGVHTHSCPQCHTDLTDSIRAHLYGCAMLPVEVRRRTQAAREAARSLM
Ga0075418_111517582	3300009100	Populus Rhizosphere	MEQQGRACPQCSRAISPEDTIVFRGRLLGHLDCRRPRVLSAEERTLLVIYCRDHHVAECRRCARRFHLQEVASPDSFGVRTYGCCGCHTDLTDSIRAHLYGCVMLQGDVRR
Ga0075418_118899081	3300009100	Populus Rhizosphere	MEQQGRTCPQCSQVISPEDTIVFGYGRLGHLNCRRPRVLSTEELTLLLIYCRDHPVAECVRCTGTFHLREVVSRDSVGIRS
Ga0075418_121546751	3300009100	Populus Rhizosphere	MQVQCAPMAAEPTATCPQCSQTISPEDTIVFRYRLLGHLDCRRPRILSAEERTLLFIYCGDHQVAECVRCTGKFDLREVASLDSLGICSHGCPWCHTDLTDSIRAHI
Ga0066709_1044543032	3300009137	Grasslands Soil	MEQLRWTCPQCSRTISPDDTIVFRCGILGHLDCHRPRVLSAEERTLLFIYCQDHQVAECARCARRLHLREVASLDSFGVRSHGCPWCHTDLTDSIRAHLY
Ga0114129_127939981	3300009147	Populus Rhizosphere	MAEQQTATCPECSRTISPEDTIVFRFGILGHLDCRRPRVLSAEERAFVVQQRFQLREVTSVDPFGIRTYECNWCHTDMTESIRGHLYGCAMLPTVVRRRAQAAREAARSLVKQS
Ga0075423_113464161	3300009162	Populus Rhizosphere	MNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPNHKIAECSTCLRQFFLREIASLDRFGVRLHVCPHCHADLTDSIRAHLYGC
Ga0075423_121147751	3300009162	Populus Rhizosphere	MEQQGRTCPQCSQTISPEDTIVFRHRLLGHLDCRRPRVLSAEERYLLVIYCWHHQVAECVSCTGKFSLREVASTDSFGVRSHVCPSCHTDLTDSIRAHLYGCAMLPAEIRRRALAAR
Ga0075423_121545851	3300009162	Populus Rhizosphere	MMNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECSTCLRQFFLREIASLDRFGVRLHVCPHCHADLTDSIRAHLYGC
Ga0126374_109086131	3300009792	Tropical Forest Soil	MAEQRTATCPQCSQMISPEDTIVFGRGRLGHLDCRRPRVLSAEEDALAFLYCLDHEVAECSPCTRRFRLREVVSQDRFGVRLHACPWCHTDLTDRIRAHLYSCTMLPAEVRRRAQVA
Ga0126374_111597421	3300009792	Tropical Forest Soil	MADPQIATCPQCSQPISPEDTLVFGHGRLGHLDCRRPRVLSAEERTVLFIYCGDHIVTKCVRCGRQLHLREVASLDSVGVRSFACPWCHVDLTDSIR
Ga0105059_10666911	3300009795	Groundwater Sand	MISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFIYCSDHQVAECVRCTGKFRLREVASLDLFGIRSHGCPWCYTDLTDSLRAHLYGCAMLPVEVRRRAQAAREAVRSLVQSLQLRGTADGLE
Ga0105063_10742331	3300009804	Groundwater Sand	MAEQQTATCPHCSRMISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFIYCSDHQVAECVRCTGKFRLREVASFDLFGIRSHGCPWCYTDLTDSLRAHLYGCAMLPVEVRRRAQAARE
Ga0126384_113651551	3300010046	Tropical Forest Soil	MIAPEDTIVFRHEILGHLDCRRPRVLSAEERTLAFLYCQDHEVAECSTCTRRFRLREVFSQDQFGVRLHACPWCHTDLTDSIRAHLYGCVMLPSEVRRQAQAARDTARSLVKRSFELRDA
Ga0126382_123396761	3300010047	Tropical Forest Soil	MISPEDTIVFGHGRLGHLDCRRPRVLSAEERTLAFLYCRDHEVAECSTCTRRFRLLELVSQDQFGVRLHACPWCHTDLTDTIRAHLYGCGMLPA
Ga0126373_118695692	3300010048	Tropical Forest Soil	MAEPQTATCPQCSRMISQEDTIVFGSGRLGHLDCRRPRVLSAEERTLALRYCHDHEVAECSTCTRRFRLRELVSQDQFGVRLYACPWCHTDLTDAIRAHLYGCAMLPAEVR
Ga0134088_103232781	3300010304	Grasslands Soil	MAEQQTATCPHCSRMLSPEDTIVFGYGLLGHLNCRRPRVLSAEECTLLFIYCRDHQVAECVRCTGKFRLGEVASLDPFGIRSHGCPWCHTDLTDSIRAHLYGCAMLP
Ga0134071_106943962	3300010336	Grasslands Soil	MAEQQTATCRECSRTISPGDTLVFGYGRLGHLVCRRPRVLSAEERTLAFLYCRDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDSIRAHLYGCAMLPVDIRRRAQVAR
Ga0126376_100863965	3300010359	Tropical Forest Soil	MISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLAFLYCQDHEVAECSSCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRAQVARDAARSLVKRSLELRDAADV
Ga0126376_107128581	3300010359	Tropical Forest Soil	MMNEQKRSCPQCSQVISPEDTIVFGRGLLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECSTCLRQFFLREIASLDRFGVR
Ga0126376_113792103	3300010359	Tropical Forest Soil	MISPEDNIVFGRGRLGHLDCRRPRVLSAEEWALLFTYCRDHPVAECIRCTGKFHLREMASRDSF
Ga0126376_118068321	3300010359	Tropical Forest Soil	MISPEDTIVFGRGLLGHLDCRRPRVLSAEERTLAFLYCGDHEVAECATCTRRFRLSELAWQDQFGVRLHACPWCHTDLTDSVRAHLYGCAMLPAE
Ga0126377_125428801	3300010362	Tropical Forest Soil	MAEQRTATCPQCSQMISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLAFLYCQDHEVAECSSCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRA
Ga0126377_128767961	3300010362	Tropical Forest Soil	MAEPQILTCLNCSRTISSEDTIVFRYGVLGHLDCRRPRVLSAEELTLLLIYCRDHRVAECVRCTSTFHLRDVVSLDSFGIRSYGCPWCHADLSGSIRAHLYACAML
Ga0126379_108194431	3300010366	Tropical Forest Soil	VSDPRTAICAQCSKPITLEDTIVFRFGVLGHLDCRRPRVLNAEERTLVFVYCQDHEICDCRPCGAKFRLREVASIDQFGIRSFTCPWCHADLV
Ga0126379_108885212	3300010366	Tropical Forest Soil	MISPEDTIVFGRGRLGHLDCHRPRVLSAEEDTLAFLYCQDHEVAECSTCTRRFRLCELVSQDRFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRAQVARDAARILVKRSLELRDAADVAMREA
Ga0126381_1007485431	3300010376	Tropical Forest Soil	MISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLAFLYCSDHEVAECSTCTRRFHLREVVSQDRFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRAQVARDAARILVKRSLELRD
Ga0126381_1048830721	3300010376	Tropical Forest Soil	MTAPLTATCPQCSKTVSPEDTIVFGFGVIGHLDCHRPRVLSAEEDTLAFLYCQDHEVAECSTCTRRFRLCELVSQDRFGVRLHACPWCHTDLTDRIRAHLY
Ga0126383_103153691	3300010398	Tropical Forest Soil	MISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLAFLYCQDHEVAECSSCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDRIRAHLYGCAMLPVEVRRRAQVARDAARSLVKRSLELR
Ga0126383_134530561	3300010398	Tropical Forest Soil	MIAQEDTIVFGSGRLGHLDCRRPRVLSAEERTLALLYCHDHEVAECSTCTRRFRLRELVSQDQFGVRLYACQWCHTDLTDAIRAHLYGCAMLPAEVRRRAQEARDAARHLVKQSQQLRDNADVLI
Ga0137391_106436762	3300011270	Vadose Zone Soil	MISPEDTIVFGYGLLGHLDCRRPRVLTAEERTLLFVYCREHQVAECFTCTGKFRLRELASQDLFGVRLHVCPWCRRDLTDSVRVHLYGCVTLPTEVLRSAQATREAVQRLV
Ga0137364_108813591	3300012198	Vadose Zone Soil	MAEQQTATCPECSRTISPGDTMVFGHGRLGHLVCRRPRVLSAEERTLLLIYCRDHPVAECVRCAGKFHLREVASIDQFGIRSHGCPWCHTDLTDSIRAHLYGCAMLP
Ga0137383_105950152	3300012199	Vadose Zone Soil	MAEQQTATCRECSRTISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCTRRFPLREVASLDSFGIRTYGCGWCHTDLTDSIRAHLYGCAMLPIAIRR
Ga0137382_105776352	3300012200	Vadose Zone Soil	MAEQQTATCRECSRTISPGDTLVFGYGRLGHLVCRRPRVLSAEERTLAFLYCRDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDSIRAHLSGCAMLPVDI
Ga0137377_108740191	3300012211	Vadose Zone Soil	MAEQQTATCPECSRTISPEDTVVFRHSLVGHLDCRRPRVLSAAERTLLLIYCRDHPVAECVRCAGKLHLREVASIDQV
Ga0137367_104644811	3300012353	Vadose Zone Soil	MQVQCAPMAAEPTATCPQCSQTISPEDTIVFRHRLLGHLDCRRPRILSAEERTLLFIYCGDHQVAECVRCTGKFHLREVAALDSLGICSHGCPWCHTDLTDSLRAHLYGCAMLPAAVRGR
Ga0137384_109458982	3300012357	Vadose Zone Soil	MAEQQTATCPECYRTISPEDTVVFRHSLVGHLDCRRPRVLSAEERTLLILYCRDHQVAECVRCTGKFRLREVASLDSFGVRSHGC
Ga0137368_102275801	3300012358	Vadose Zone Soil	MISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFIYCRAHQVAECVRCTGKFRLGEVASLDLFGIRSHGCPWCHTDLTDSIRAHLYGCAMLPVEVRRGAQAAREAVRSLVQSLQ
Ga0137360_103699891	3300012361	Vadose Zone Soil	MAEQQTATCPECSRTISPEDTIVFGFGILGHLDCRRPRVLSAEERTLLFVYCRDHQVAECVRCTARFQLQGVTSVDPFGIRTYECRWCHADLTESIR
Ga0137360_112899572	3300012361	Vadose Zone Soil	VEPPPWICPTCARTISPEDTIVFGFGHLGHLDCHRPRVLSAEERILLVIYCRDHQVAECVGCTRRLRLREVASLDLGVRSYKCPWSHADLTDSIRTHLYGCAMLPGEVRYRARRAREAARSLVKQSHQL
Ga0137361_110090441	3300012362	Vadose Zone Soil	MAEQQIATCPECSRTISPEDTIVFRFGRLGHLNCRRPCVLSAEERTLLSIYCRDHPVAECVRCAGRFHLREVASLDQFGTRSHGCPWCHIDLTDSIRAHLYSCAMLPA*
Ga0137397_102063441	3300012685	Vadose Zone Soil	MTAQQTATCPECSRTILPDDTLVFGFGILGHLDCRRPRVLSAEEHTLLFVYCRDHQVAECVRCTRRFHLREVASLNSFGVRTYECRWCHADLTDSIRAHLYSCALLPVAVRRRAQ
Ga0137397_108296711	3300012685	Vadose Zone Soil	MPEQPTATCPECSRTISPADTVVFRRRLVGHLDCRRPRVLSAEERTLLIIYCRDHEVAECVRCGRKSRLPEAASRDSFGVRLHACPACHTDLTDYIRTHLYSCAVLPAEVRRRAL
Ga0137395_108049951	3300012917	Vadose Zone Soil	MPEQPTVTCPECSRTISPDDTVVFRRRLIGHLDCRRPRVLSAEERTLLIIYCRDHEVAECVPCGRKSRLPEAASRDSFGVRLHACPACHTDLTDYIRTHLYSCAALPAEVRRRALAAREA
Ga0137410_112055131	3300012944	Vadose Zone Soil	VEQQPGVCPSCGQALSPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCTGKFRLREVASLDLFGIRAHGCPWCHTDLTDSIRAHLYGCAMLPVEVRR
Ga0126375_104598511	3300012948	Tropical Forest Soil	MNEQKRSCPQCSQVISPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECSTCLRQFFLREIASLDRFGVRLHVCPHCHADLTDSIRA
Ga0126375_110484711	3300012948	Tropical Forest Soil	MVERQSATCPQCSQPISPEDTVVYGRGAVGHLDGRRPRVLSAEERTLLSIYCRDHPVAECVRCTGKFHLREIVSPDQFGIRLYGRRWCHTDLTDRIR
Ga0126375_114715222	3300012948	Tropical Forest Soil	MAEPQTATCSQCSRMIAPEDTIVFRHGILGHLDCRRPRVLSAEERTLAFLYCQDHEVAECSTCTRRFRLRELVSQDQFGVRLH
Ga0126369_103680523	3300012971	Tropical Forest Soil	MAEQQTATCPQCSRMISPEDTIVFGRGRLGHLDCHRPRVLSAEEDTLAFLYCQDHEVAECSTCTRRFRRCEVVSQDRFGVRLHACPWCHT
Ga0126369_105224252	3300012971	Tropical Forest Soil	MAEQQTVTCPQCSRMISPEDTIAFGRGRLGHLDCRRPRVLSAEEDTLAFLYCQDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDAIRAHLYSCAMLPAEVRRRAQAA
Ga0126369_126816061	3300012971	Tropical Forest Soil	MAEPQTATCPQCSRMISPEDTIVFGSGRLGHLDCRRPRVLSAEEWALLFTYCGDHPVAECMRCTGKFHLREMTSR
Ga0134076_104663432	3300012976	Grasslands Soil	MAEQRTATCPECSRTISPDDTIVFDFGLLGHLDCRRPRVLSAEERTRLFVYCRDHQVAECVRCTRRFHLREVASLNSFGVHTYECRWCHADLTDSIRAHLYSCALLP
Ga0134075_103064083	3300014154	Grasslands Soil	MAEQRTATCPECSRTISPDDTIVFDFGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVPCAGRFHLREVASLDLGVRSYGCPWCHTDLTDSIR
Ga0134083_102905292	3300017659	Grasslands Soil	MAELQTATCPHCSWRISPEDTIVFGYGLLGHLDCRRPRVLSAEERTLLFVYCREHQVAECFTCAGKFRLRELASQDPFGVHLHACPWCRRDLTDSVRVH
Ga0184626_103180252	3300018053	Groundwater Sediment	MEQQPWVCPQCARALSPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCAARFHLREVASLDSLGIRTHGCPWCHTDLTDSIRAHLYGCAMLPMEIQRRAQAAREAVRSLV
Ga0066655_112663771	3300018431	Grasslands Soil	MAEQRTATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREVASLDLGVRSYKCPWC
Ga0066662_113815372	3300018468	Grasslands Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLLIYCRDHPVAECVRCAGKFHLREVASIDQVGIRSHGCPWCHTDLTDSIRAHLY
Ga0207684_101064052	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAEQQIATCPECSRTISPEDTIVFGYGLLGHLDCLRPRVLSAEERVLLVIYCRDHQVAECVRCTRRFHLREVASLDLGVRSYKCPWCHMDLTDSIRAHLYAVRCCQRKSDTGRVRRVRRREAW
Ga0207684_109538781	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEQEGRTCPQCSRTISPEDTIVFRHRLLGHLDCGRPRVLSAEERTLLLIYCRDHHVAECVRCAGRFHLREVASIDSLGIRSHGCPWCHTDLTDSIR
Ga0207646_102783134	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MISPEDTIVFGYGLLGHLDCRRPRVLSAEERILLVIYCRDHQVAECVGCTRTFHLREVASLDLGVRSD
Ga0207681_102488543	3300025923	Switchgrass Rhizosphere	MMNEQKRTCPQCSRVISPDDTIVFGHGRLGHLDCRRPRVLSAEERTLLFLYCPDHKIAECPTCRRKSLLGEVASLDRFGVRVHVCPWCNADLTDSIRAHLYG
Ga0209055_10160566	3300026309	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCSRCHTDLTDSIRAHLSGCAMLPVAIRRGAKAAREAVRRLVKQSHQL
Ga0209761_10218671	3300026313	Grasslands Soil	MAEQQTATCPECSRTLLPDDTIVFDFGLLGHLDCRRPRVLSAEERTLLFLYCRDHEVAECVRCAGKFHLREVASLDLGVRSYGCPWCHTDLTDSIRAHLYGCAMLPGQVRRRAQAAREA
Ga0209761_13318531	3300026313	Grasslands Soil	VEQQPWVCPQCARALSPEDTIVFGHGLLGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCTGKFRLREVASLDLLGIRSHGCPWCHTDLTDSIRAHLYGCARLPVELRRRAQAAREAARSLVK
Ga0209154_10179413	3300026317	Soil	MAEPQTATCPQCSLTISPEDTIVFGFGILGHLDCRQPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCTRT
Ga0209152_100758351	3300026325	Soil	VEPQPWICPTCARTISPEDTIVFGFGHLGHLDCHRPRVLSAEERILLVIYCRDHQVAECVGCTRRLRLREVASLDLGVRSYKCPWCHTDLTDSIRTHLYGCAMLPGEVRYRARAAREAARSLVKQSHQLTD
Ga0209801_11840251	3300026326	Soil	MAEQQTATCRECSRTISPGDTLVFGYGRLGHLVCRRPRVLSAEERTLAFLYCRDHEVAECSTCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDSIRAHLYGCAMLPVDIRRRAQVAREAARS
Ga0209267_11638393	3300026331	Soil	MAEPQTATCPQCSLTISPEDTLVFGFGILGHLDCRRPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSF
Ga0209803_10174315	3300026332	Soil	VEPQPWICPTCARTISPEDTIVFGFGHLGHLDCHRPRVLSAEERTLLVIYCGDHQVAECVGCTRRFHLREVASLDLGVRSYKCPWCHTDLTDS
Ga0209804_10251771	3300026335	Soil	MAEPQTATCPQCSLTISPEDTIVFGFGILGHLDCRQPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSFGTRTYGCSRCHTDLTDSIRAHLSGCAMLPVAIRRGAKAAREAVRRLVKQSH
Ga0209804_11644061	3300026335	Soil	MEQLRWTCPQCSRTISPDDTIVFRCGILGHLDCHRPRVLSAEERTLLFIYCQDHQVAECARCARRLHLREVASLDSFGVRSHGCPWCHTDLTD
Ga0209804_13454592	3300026335	Soil	MAEQQPATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREV
Ga0209690_10894611	3300026524	Soil	MADQQTATCPECSRTISPEDTIVFRFGILGHLECRRPRVLSAEERTLLFIYCRDHSVAECVRCSRKFHLREVVSIDQFGIRSHGCPWCHTDL
Ga0209160_10947821	3300026532	Soil	MAEPQTATCPQCSLTISPEDTIVFGFGILGHLDCRQPRVLSAEERTLLFIYCRDHQVAECVRCGGRLHLREVASIDSF
Ga0209684_10130503	3300027527	Tropical Forest Soil	MAEQQTVTCPQCSRMISPEDTIVFGRGRLGHLDCRRPRVLSAEEDTLALLYCQDHEVAECSTCTRRFRLRELVS
Ga0209689_10449101	3300027748	Soil	MAEQQPATCPECSRTISPDDTIVFGRSLLGHLDCRRPRVLSAEERILLIIYCRDHQVAECVGCTRTFHMREVASLDLGVRSYKCPWCHTDLTDSIRAHLYGCAMLPAKV
Ga0307468_1009577261	3300031740	Hardwood Forest Soil	MAEQQIATCPECSRTISPEDTIVFRFGILGHLDCRRPRVLSAEEHTLLFVYCRDHQVAECVRCTRRFHLRVVASLNSFGVRTYECRW
Ga0307468_1014332802	3300031740	Hardwood Forest Soil	VLSFGRSAIFGGAPTMERQERSCPNCSRTISPDDTIVFGYGRLGHLDCRRPRLLSTEERTLLLIFCRDHQVAECVRCAGRFHLQEVASRDSFGVHTHRCPQCHTDLTDRLRAHLYGCAMLPVSTT
Ga0318502_105879951	3300031747	Soil	MTAPQTATCPQCSRMISPEDTIVFGRGRLGHLDCRRPRVLSAEERTLAFLYCPDHEVAECATCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDSIRAHLY
Ga0306925_120952561	3300031890	Soil	MTAPQTATCPQCSRMISPEDTIVFGRGRLGHLDCRRPRVLSAEERTLAFLYCPDHEVAECATCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDAIRAHLYGCGMLPAEVRRRAQEA
Ga0306926_101241651	3300031954	Soil	MISPEDTIVFGRGRLGHLDCRRPRVLSAEERTLAFLYCPDHEVAECATCTRRFRLRELVSQDQFGVRLHACPWCHTDLTDAIRAHLYGCGMLPAEVRRRAQEA
Ga0318518_102912072	3300032090	Soil	MTAPQTATCPQCSRMISPEDTIVFGRGRLGHLDCRRPRVLSAEERTLAFLYCRDHEVAECPTCTRRFRLLELVSQNQFGVRLHACPWCHTDLTDAIRAHLYGCGMLPAEVRRRAQEARDAARQLVKQSQHLRDN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061039

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences