Metagenome Family F060981

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060981
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	57 residues
Representative Sequence	MVATMTADVKMRIADLERQKIELNNRIERLSYSGNHQRMLELEQEVWEIEDTIKKLMP
Number of Associated Samples	85
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	84.85 %
% of genes near scaffold ends (potentially truncated)	26.52 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Archaea (38.636 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (40.909 % of family members)
Environment Ontology (ENVO)	Unclassified (80.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.970 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1GOS2230_10038921 2GOS2243_10488733 3GOS2242_10557593 4JGI25127J35165_10042832 5JGI25132J35274_10198404 6Ga0066845_100029005 7Ga0066845_101104213 8Ga0066830_100017118 9Ga0066830_100276673 10Ga0066830_101162182 11Ga0066865_102346423 12Ga0066865_103797242 13Ga0066840_100596813 14Ga0066370_100305332 15Ga0066370_101872804 16Ga0068468_10341584 17Ga0099693_10496603 18Ga0099954_10448855 19Ga0098038_10564823 20Ga0098038_11335263 21Ga0098037_10762233 22Ga0114932_106093391 23Ga0115013_106277713 24Ga0115011_100349955 25Ga0114933_102078074 26Ga0115012_101992005 27Ga0115012_108739172 28Ga0115012_109626421 29Ga0115012_110238353 30Ga0160422_100072874 31Ga0160422_101244494 32Ga0160422_104781183 33Ga0160423_100885161 34Ga0160423_109068711 35Ga0160423_109873993 36Ga0160423_110244401 37Ga0163110_102508222 38Ga0163110_102755324 39Ga0163110_103835761 40Ga0163110_105802253 41Ga0163110_107324941 42Ga0163110_110238183 43Ga0163110_111220793 44Ga0163110_116632052 45Ga0163110_116737732 46Ga0163109_103459875 47Ga0163109_105403924 48Ga0163109_106939412 49Ga0163179_106599173 50Ga0163111_100144194 51Ga0163111_102173252 52Ga0163111_105591002 53Ga0181369_10261054 54Ga0181369_11233601 55Ga0181373_10227912 56Ga0181373_10380841 57Ga0181415_10167161 58Ga0181393_10249243 59Ga0187219_12150621 60Ga0181414_11353081 61Ga0187221_10701001 62Ga0181552_105860262 63Ga0181553_102880895 64Ga0181553_103092163 65Ga0181564_105147303 66Ga0211707_10268622 67Ga0211700_10289352 68Ga0211588_10842512 69Ga0211484_10511373 70Ga0211658_10120613 71Ga0211606_10210442 72Ga0211594_10280402 73Ga0211607_11173102 74Ga0211712_100890422 75Ga0211703_101454622 76Ga0211477_102561412 77Ga0211652_101899262 78Ga0211498_101514003 79Ga0211476_100388401 80Ga0211677_102072924 81Ga0211618_101143881 82Ga0211583_100346042 83Ga0211583_101414143 84Ga0211636_101001462 85Ga0211636_101125843 86Ga0211617_104776472 87Ga0211532_101270932 88Ga0211659_101233651 89Ga0211659_103088812 90Ga0211699_101519141 91Ga0211516_100288677 92Ga0211516_101194102 93Ga0211523_101429014 94Ga0211644_103402092 95Ga0211521_102649921 96Ga0211521_102891051 97Ga0211565_100738494 98Ga0211708_101041662 99Ga0211708_101067291 100Ga0211539_102342902 101Ga0211539_103194243 102Ga0211576_100659252 103Ga0211574_105005231 104Ga0211638_100652632 105Ga0211638_101187833 106Ga0211641_100738854 107Ga0211473_104128991 108Ga0211676_100718875 109Ga0211676_103352493 110Ga0211640_103344374 111Ga0211475_101542834 112Ga0211577_101037617 113Ga0211543_104191923 114Ga0211614_103971832 115Ga0211614_104052941 116Ga0211625_104805151 117Ga0211547_104927362 118Ga0211541_100916394 119Ga0211541_105445761 120Ga0208666_10265005 121Ga0208666_10819213 122Ga0209535_10635246 123Ga0209348_10213081 124Ga0209348_10259171 125Ga0209645_10065681 126Ga0209645_10264475 127Ga0209645_10271752 128Ga0209645_10784701 129Ga0209645_11836451 130Ga0208763_10690761 131Ga0310343_104651723 132Ga0310343_114841852
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1GOS2230_10038921 2Ga0066845_101104213 3Ga0066370_101872804 4Ga0098038_11335263 5Ga0160423_100885161 6Ga0163110_116632052 7Ga0163109_103459875
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0160422_101244494 2GOS2230_10038921 3GOS2242_10557593 4JGI25132J35274_10198404 5Ga0066845_101104213 6Ga0066370_100305332 7Ga0098037_10762233 8Ga0114933_102078074 9Ga0115012_108739172 10Ga0160423_100885161 11Ga0160423_110244401 12Ga0163109_106939412 13Ga0163111_102173252 14Ga0181369_10261054 15Ga0181369_11233601 16Ga0187219_12150621 17Ga0211484_10511373 18Ga0211712_100890422 19Ga0211636_101001462 20Ga0211699_101519141 21Ga0211516_100288677 22Ga0211523_101429014 23Ga0211644_103402092 24Ga0211638_100652632 25Ga0211638_101187833 26Ga0211547_104927362
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.81% β-sheet: 0.00% Coil/Unstructured: 44.19%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.5.1: Prefoldin	d1fxkc_	1fxk	0.89625
a.25.1.1: Ferritin	d1nfva_	1nfv	0.88511
a.25.1.4: YciF-like	d2gyqa1	2gyq	0.88322
a.266.1.0: automated matches	d2nw8a_	2nw8	0.87914
a.25.1.0: automated matches	d5hjfa_	5hjf	0.86765

Showing 1 to 5 of 5 entries

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF14743	DNA_ligase_OB_2	25.00
PF07486	Hydrolase_2	0.76
PF01515	PTA_PTB	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	0.76
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	41.67 %
Unclassified	root	N/A	31.82 %
Viruses	superkingdom	All Organisms → Viruses	26.52 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	38.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	37.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.76 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.76 %
Unclassified	root	N/A	31.82 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	37.88 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	0.76 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrosopelagicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus	0.76 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %
unclassified Candidatus Nitrosopelagicus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	0.76 %
Cryomorphaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	1.52 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	0.76 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %
unclassified Cryomorphaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae	1.52 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	0.76 %
Cryomorphaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1.52 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	37.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	26.52 %
Unclassified	root	N/A	31.82 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001960\|GOS2230_1003892	Not Available	1345	Open in IMG/M
3300001965\|GOS2243_1048873	All Organisms → Viruses → Predicted Viral	1736	Open in IMG/M
3300001967\|GOS2242_1055759	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300002482\|JGI25127J35165_1004283	All Organisms → Viruses → Predicted Viral	3809	Open in IMG/M
3300002483\|JGI25132J35274_1019840	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1594	Open in IMG/M
3300005432\|Ga0066845_10002900	Not Available	5620	Open in IMG/M
3300005432\|Ga0066845_10110421	Not Available	1044	Open in IMG/M
3300005433\|Ga0066830_10001711	Not Available	3829	Open in IMG/M
3300005433\|Ga0066830_10027667	All Organisms → Viruses → Predicted Viral	1130	Open in IMG/M
3300005433\|Ga0066830_10116218	Not Available	573	Open in IMG/M

Showing 1 to 10 of 132 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.30%
Oceanic	Environmental → Aquatic → Marine → Oceanic	48.48%
Strait	Environmental → Aquatic → Marine → Strait	3.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	40.91%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.52%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	18.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	40.91%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	29.55%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.52%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	40.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	27.27%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.27%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.03%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	2.27%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.52%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.76%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	14.39%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M

Showing 1 to 10 of 85 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2230_10038921	3300001960	Marine	MIITMTQDTKDRIADLERQKIELNNRIETLSYSGNHQRMLELEQEVWEIEDTIKKLIP*
GOS2243_10488733	3300001965	Marine	MVETMTADTKLRIADLERQKIELNNKIETLSYSGNHVRMIELEQEVWEIEDTIKKLIS*
GOS2242_10557593	3300001967	Marine	MVETMTADTKLKIADLERQKIELNNKIETLSYSGNHVRMIELEQEVWEIEDTIKKLIS*
JGI25127J35165_10042832	3300002482	Marine	MVATMTADVKNRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIKKLMP*
JGI25132J35274_10198404	3300002483	Marine	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHERMLELEQEVWEIEDTIRKLMP*
Ga0066845_100029005	3300005432	Marine	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKLMP*
Ga0066845_101104213	3300005432	Marine	MVETMTADTKLRIADLERQKIELENRIELLSYAGNHIKMVELEEELFEIEDTIRKLLP*
Ga0066830_100017118	3300005433	Marine	MVATMTQDVKLRIADLERQKIELNNRIERLSYSGNHERMLELEQEVWEIEDTIKKLIG*
Ga0066830_100276673	3300005433	Marine	MVETMTADTKLRIADLERQRIELNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLMP*
Ga0066830_101162182	3300005433	Marine	LGRRRHRSRSGGNMVETMSADTKLRIADLERQKIDLESRIEMLSYAGNHIKMVELEEELFEIEDTIRKLLP*
Ga0066865_102346423	3300005523	Marine	MVATMTADVKNRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIRKLMP*
Ga0066865_103797242	3300005523	Marine	MIETMTEDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP*
Ga0066840_100596813	3300005608	Marine	MVATMTADVKDRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIKKLMP*
Ga0066370_100305332	3300005971	Marine	MVALMSQDTKDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVWEIEDTIKKLMP*
Ga0066370_101872804	3300005971	Marine	MVALMSQDTKDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVWE
Ga0068468_10341584	3300006305	Marine	MVETMTADVKMRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP*
Ga0099693_10496603	3300006345	Marine	MVETMTADVKMRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIVDTIRKLMP*
Ga0099954_10448855	3300006350	Marine	MVATMTADVKIRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP*
Ga0098038_10564823	3300006735	Marine	MVETMTADTKLRIADLERQKIELNARIERLSYSGNHARMLELEQEVWEIEDTIRKLIP*
Ga0098038_11335263	3300006735	Marine	MVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDT
Ga0098037_10762233	3300006737	Marine	MVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDTIRKLLP*
Ga0114932_106093391	3300009481	Deep Subsurface	MVETMTVDVKHRIADLERQKLDLNNRIERLSYSSNHQRMLELEQEVWEIEDTIRKLLP*
Ga0115013_106277713	3300009550	Marine	VRSGGNMVAVMTVDTKDRIADLERQKIEINNRIEILSYSGNHRRMLELEQEVWEIEDTIRKLMP*
Ga0115011_100349955	3300009593	Marine	MVETMTADTKLRIADLERQKIELENRIELLSYAGNHIKMVKLEEELFEIEDTIRKLLP*
Ga0114933_102078074	3300009703	Deep Subsurface	MVETMTADVKHRIANLERQKIELNATIERLSYSGNHKRMLELEQEVWEIEDTINKLTA*
Ga0115012_101992005	3300009790	Marine	MVETMSADTKLRIADLERQKIELENRIELLSYAGNHIKMVELEEELFEIEDTIRKLLP*
Ga0115012_108739172	3300009790	Marine	MVEVMTADVKHRIADLERQKVELNNRIETLSYSGNHQRMLELEQEVWEIEDTIRKLMP*
Ga0115012_109626421	3300009790	Marine	ADVKDRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIRKLMP*
Ga0115012_110238353	3300009790	Marine	MVALMSQDTKDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVLEIEDTIRKLMP*
Ga0160422_100072874	3300012919	Seawater	MVATMTQDVKMRIADLERQKIELNNRIERLSYSGNHERMLELEQEVWEIEDTIKKLIG*
Ga0160422_101244494	3300012919	Seawater	MVATMTADVKMRIADLERQKIELNNRIERLSYSGNHQRMLELEQEVWEIEDTIKKLMP*
Ga0160422_104781183	3300012919	Seawater	MVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP*
Ga0160423_100885161	3300012920	Surface Seawater	RHRIRSGGNMVAVMSQDTKDRIANLERQKIDLNNRIERLSYSGNHAKMLELEQEVWEIEDTISKLMP*
Ga0160423_109068711	3300012920	Surface Seawater	TADTKLRIADLERQKIELNSRIERLSYSGNHERMLELEQEVWEIEDTIKKLMP*
Ga0160423_109873993	3300012920	Surface Seawater	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLIP*
Ga0160423_110244401	3300012920	Surface Seawater	MVETMTADVRLRIADLERQRIELNNRIERLSYSSNHAKMLELEQEVWEIEDTIKKLLP*
Ga0163110_102508222	3300012928	Surface Seawater	MVATMTVDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP*
Ga0163110_102755324	3300012928	Surface Seawater	MVAVMSQDTKDRIANLERQKIDLNNRIERLSYSGNHAKMLELEQEVWEIEDTISKLMP*
Ga0163110_103835761	3300012928	Surface Seawater	MTQDTKDRIADLERQKIELNNRIETLSYSGNHQRMLELEQEVWEIEDTIKKLIP*
Ga0163110_105802253	3300012928	Surface Seawater	MVETMSADTKLRIADLERQKIDLESRIEMLSYAGNHIKMVELEEELFEIEDTIRKLLP*
Ga0163110_107324941	3300012928	Surface Seawater	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKL
Ga0163110_110238183	3300012928	Surface Seawater	MVAIMTTDVKHRIADLERQKLELNNRIELLSYSGNHQRMLELEQEVWEIEDTISKLMP*
Ga0163110_111220793	3300012928	Surface Seawater	MVPVMTQDTKDRIANLERQKIDLNNRIERLSYSGNHARMLELEQEVWEIEDTIRKLLP*
Ga0163110_116632052	3300012928	Surface Seawater	KDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVWEIEDTIKKLMP*
Ga0163110_116737732	3300012928	Surface Seawater	MVETMTADTKLRIADLQRQKIELNARIERLSYSGNHARMLELEQEVWEIEDTIRKLMP*
Ga0163109_103459875	3300012936	Surface Seawater	MVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIE
Ga0163109_105403924	3300012936	Surface Seawater	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHERMLELEQDVWEIEDTIRKLMP*
Ga0163109_106939412	3300012936	Surface Seawater	MVKTMTADTKDRIRDLERQKIDLNTRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP*
Ga0163179_106599173	3300012953	Seawater	MTQDARQRIADLERQKIDLNNNIERLSYSRNHARMLELEQEVWEIEDTIRKLLP*
Ga0163111_100144194	3300012954	Surface Seawater	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKLIV*
Ga0163111_102173252	3300012954	Surface Seawater	MVETMTADAKLRIADLERQRIELNSRIERLSYSGNHAKMLELEQEVWEIEDSIKKLMP*
Ga0163111_105591002	3300012954	Surface Seawater	MIETMSADTKLRIADLERQKVELNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLMP*
Ga0181369_10261054	3300017708	Marine	MVETMTADTKLRIADLERQKIELENRIETLSYSGNHARMLELEQEVWEIEDTVRKLLP
Ga0181369_11233601	3300017708	Marine	RRHRVRSGGNMVAVMTVDTKERIADLERQKIEINNRIEILSYSGNHKRMLELEQEIWEIEDTIRKLMP
Ga0181373_10227912	3300017721	Marine	MVAVMTVDTKERIADLERQKIEINNRIEILSYSGNHKRMLELEQEIWEIEDTIRKLMP
Ga0181373_10380841	3300017721	Marine	MVETMTADTKLRIADLERQKIELENRIETLSYSGNHARMLELEQEVWEIE
Ga0181415_10167161	3300017732	Seawater	WLGRRRHRIRSGGNMVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDTIRKLLP
Ga0181393_10249243	3300017748	Seawater	MVAVMSQDIKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDTIRKLLP
Ga0187219_12150621	3300017751	Seawater	MVNTMTQDARLRIADLERQKIDINNNIERLSYSSNHARMLELEQEVWEIEDTIRKLLP
Ga0181414_11353081	3300017759	Seawater	GGNMVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDTIRKLL
Ga0187221_10701001	3300017769	Seawater	MVNTMTQDARLRIADLERQKIDLNNNIERLSYSSNHARMLELEQEVWEIEDTIRKL
Ga0181552_105860262	3300017824	Salt Marsh	MVATMTQDVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWEIEDTIKKLIG
Ga0181553_102880895	3300018416	Salt Marsh	MVATMTQDVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWEIEDTIKKL
Ga0181553_103092163	3300018416	Salt Marsh	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLMP
Ga0181564_105147303	3300018876	Salt Marsh	MVATMTQDVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWEIE
Ga0211707_10268622	3300020246	Marine	MVALMSQDTKDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVWEIEDTIRKLMP
Ga0211700_10289352	3300020251	Marine	MVATMTADVKIRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211588_10842512	3300020260	Marine	MVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211484_10511373	3300020269	Marine	MIETMTEDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLLP
Ga0211658_10120613	3300020274	Marine	MVETMTADTKLRIADLERQKIELNNKIETLSYSGNHVRMIELEQEVWEIEDTIKKLIS
Ga0211606_10210442	3300020278	Marine	MVATMTADVKDRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIKKLMP
Ga0211594_10280402	3300020340	Marine	MVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLMP
Ga0211607_11173102	3300020346	Marine	MVATMTADVKDRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211712_100890422	3300020360	Marine	MVETMTADVKHRIADLERQKLDLNNRIERLSYSSNHQRMLELEQEVWEIEDTIRKLLP
Ga0211703_101454622	3300020367	Marine	MVALMSQDTKDRIANLERQKLEINSRIEVLSYSGNHKRMLELEQEVWEIEDTIKKLMP
Ga0211477_102561412	3300020374	Marine	TMTADVKMRIADLERQKIELNGRIERLSYSGNHQRMLELEQEVWEIEDTIKKLIG
Ga0211652_101899262	3300020379	Marine	MVETMTADTKLRIADLERQKIELENRIELLSYAGNHIKMVKLEEELFEIEDTIRKLLP
Ga0211498_101514003	3300020380	Marine	LRIADLERQKIDLESRIEMLSYAGNHIKMVELEEELFEIEDTIRKLLP
Ga0211476_100388401	3300020381	Marine	HRIRSGGNMVATMTADVKMRIADLERQKIELNGRIERLSYSGNHQRMLELEQEVWEIEDTIKKLIG
Ga0211677_102072924	3300020385	Marine	MVETMTVDTKLRIADLERQKIELENRIELLSYAGNHIKMVELEEEMFEIEDTIRKLLP
Ga0211618_101143881	3300020393	Marine	MVATMTADVKMRIADLERQKIELNNRIERLSYSGNHQRMLELEQEVWEIEDTIKKLMP
Ga0211583_100346042	3300020397	Marine	MIITMTQDTKDRIADLERQKIELNNRIETLSYSGNHQRMLELEQEVWEIEDTIKKLIP
Ga0211583_101414143	3300020397	Marine	MVATMTTDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211636_101001462	3300020400	Marine	MVETMTTDVKHRIADLERQKLDLNNRIELLSYSGNHQKMLELEQEVWEIEDTISKLMP
Ga0211636_101125843	3300020400	Marine	MVETMTADVKHRIADLERQKLDLNNRIERLSYSSNTKKMLELEQEVWEIEDTIRKLLP
Ga0211617_104776472	3300020401	Marine	GNMVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211532_101270932	3300020403	Marine	MVAVMTADVKHRIADLERQKVELNNRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211659_101233651	3300020404	Marine	MVETMTADTKLRIADLERQRIELNSRIERLSYSGNHARMLELEQEVWEIEDTIRKLMP
Ga0211659_103088812	3300020404	Marine	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKLIV
Ga0211699_101519141	3300020410	Marine	MVAVMTQDVKDRIAGLERQKIELNHRIEILSYSGNHEKMLELEQEVWEIEDTIGKLMP
Ga0211516_100288677	3300020413	Marine	MKTMTIDTKDRIAELERQKIELNNRIERLSYSSNHRRMLELEQEVWEIEDTIRKLLP
Ga0211516_101194102	3300020413	Marine	MIETMTADVKMRIADLERQKIELNGRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211523_101429014	3300020414	Marine	MVETMTIETKNRIADLERQKIELENRIEMLSYARNHLKMVELEQELFEVEDTIRKLLP
Ga0211644_103402092	3300020416	Marine	MIETMSADTKLRIADLERQKVELNNRIETLSYSGNHTRMLELEQEVWEIEDTIKKLIK
Ga0211521_102649921	3300020428	Marine	DMVETMTADVKHRIANLERQKIELNATIERLSYSGNHKRMLELEQEVWEIEDTINKLTA
Ga0211521_102891051	3300020428	Marine	MVAVMTVDTKDRIADLERQKIEINNRIETLSYSGNHRRMLELEQEVWEIED
Ga0211565_100738494	3300020433	Marine	MVKTMTADTKDRIRDLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP
Ga0211708_101041662	3300020436	Marine	MVETMTADVKHRIADLERQKLDLNNRIERLSYSSNHEKMLELEQEVWEIEDTIRKLLP
Ga0211708_101067291	3300020436	Marine	MVALMSQDTKDRIAELERQKIEINSRIEILSYSGNHKRMLQLEQEVWEIDDTIKKLMP
Ga0211539_102342902	3300020437	Marine	GNMVATMTTDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIKKLIA
Ga0211539_103194243	3300020437	Marine	MVATMTADVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWEIEDTIKK
Ga0211576_100659252	3300020438	Marine	MVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIEDTIRKLLP
Ga0211574_105005231	3300020446	Marine	TKDRIANLERQKIDLNNRIERLSYSGNHAKMLELEQEVWEIEDTISKLMP
Ga0211638_100652632	3300020448	Marine	MVETMTADIKLQIADLERQKIELNNRIETLSYSGNHKRMLELEQEIWEIEDTINKLIG
Ga0211638_101187833	3300020448	Marine	MVATMTAEIKNRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIKKLIG
Ga0211641_100738854	3300020450	Marine	MVATMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKLIV
Ga0211473_104128991	3300020451	Marine	MVETMTADTKLRIADLERQKIELENRIELLSYAGNHIKMVELEEELFEIEDTIRKLLP
Ga0211676_100718875	3300020463	Marine	MVATMTADVKIRIADLERQKIELNATIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0211676_103352493	3300020463	Marine	VKHRIANLERQKIELNATIERLSYSGNHKRMLELEQEVWEIEDTINKLTA
Ga0211640_103344374	3300020465	Marine	MVETMTADVKIRIADLERQKLELNNRIERLSYSSNHQRMLELEQEVWEIEDTIRKLLP
Ga0211475_101542834	3300020468	Marine	MVAVMTVDTKDRIADLERQKIEINNRIETLSYSGNHRRMLELEQEVWEIEDTIRKLMP
Ga0211577_101037617	3300020469	Marine	MVNTMTQDARLRIADLERQKIDLNNNIERLSYSSNHARMLELEQEVWEIEDTIRKLLP
Ga0211543_104191923	3300020470	Marine	MVATMTADVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWE
Ga0211614_103971832	3300020471	Marine	MVETMTADVKHRIADLERQKLDLNNRIERLSYSSNHEKMLELEQEVWEIEDTIKKLLP
Ga0211614_104052941	3300020471	Marine	GGNMVATMTADVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLM
Ga0211625_104805151	3300020473	Marine	MVETMTADVKHRIADLERQKLDLNNRIERLSYSSNTKKMLELEQEVWEIEDTI
Ga0211547_104927362	3300020474	Marine	MIETMTADVKMRIADLERQKIELNSRIERLSYSGNHQRMLELEHEVWEIEDTIKKLIG
Ga0211541_100916394	3300020475	Marine	MVATMTTDVKMRIADLERQKIELNSRIERLSYSGNHQRMLELEHEVWEIEDTIKKLIG
Ga0211541_105445761	3300020475	Marine	MVAVMTVDTKDRIADLERQKIEINNRIEILSYSGNHRRMLELEQEVWEIEDTIRKLMP
Ga0208666_10265005	3300025102	Marine	MVETMTADTKLRIADLERQKIELNARIERLSYSGNHARMLELEQEVWEIEDTIRKLIP
Ga0208666_10819213	3300025102	Marine	MVAVMSQDTKLRIADLERQKVELENRIETLSYSGNHIRMVELEQEVWEIE
Ga0209535_10635246	3300025120	Marine	MVNTMTQDARLRIADLERQKIDINNHIEILSYSSNHARMLELEQEVWEIEDTIRKLLP
Ga0209348_10213081	3300025127	Marine	RIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIKKLMP
Ga0209348_10259171	3300025127	Marine	MVATMTADVKNRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0209645_10065681	3300025151	Marine	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHERMLELEQEVWEIEDTIRKLMP
Ga0209645_10264475	3300025151	Marine	MVETMTADTKLRIADLERQKIELNSRIERLSYSGNHARMLELEQEVWEIEDTIKKLMP
Ga0209645_10271752	3300025151	Marine	MVATMTADVKMRIADLERQKIDLNNRIERLSYSGNHKRMLELEQEVWEIEDTIKKLIG
Ga0209645_10784701	3300025151	Marine	MVATMTVDVKMRIADLERQKIDLNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0209645_11836451	3300025151	Marine	MVATMTADVKNRIADLERQKLDLNNRIEILSYSGNHQRMLELEQEVWEIEDTIKKLMP
Ga0208763_10690761	3300026136	Marine	MVATMTQDVKMRIADLERQKIELNNRIERLSYSGNHERMLELEQEVWEIEDTIKKLIG
Ga0310343_104651723	3300031785	Seawater	MVATMTADVKIRIADLERQKIELNSRIERLSYSGNHQRMLELEQEVWEIEDTIRKLMP
Ga0310343_114841852	3300031785	Seawater	MVETMTADVKMRIADLERQKIDLNSRIERLSYSGNHQKMLELEQEVWEIEDTIRKLMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences