Metagenome / Metatranscriptome Family F060946

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	53 residues
Representative Sequence	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA
Number of Associated Samples	93
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	42.42 %
% of genes from short scaffolds (< 2000 bps)	78.03 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.879 % of family members)
Environment Ontology (ENVO)	Unclassified (43.939 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01520	Amidase_3	4.55
PF03237	Terminase_6N	3.79
PF13884	Peptidase_S74	2.27
PF11752	DUF3309	1.52
PF00583	Acetyltransf_1	1.52
PF07460	NUMOD3	1.52
PF01471	PG_binding_1	1.52
PF04404	ERF	1.52
PF12236	Head-tail_con	1.52
PF01464	SLT	0.76
PF13538	UvrD_C_2	0.76
PF00176	SNF2-rel_dom	0.76
PF13252	DUF4043	0.76
PF12844	HTH_19	0.76
PF11774	Lsr2	0.76
PF04233	Phage_Mu_F	0.76
PF01381	HTH_3	0.76
PF01833	TIG	0.76
PF04851	ResIII	0.76
PF12200	DUF3597	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	4.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
All Organisms	root	All Organisms	43.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
cellular organisms	root	All Organisms → cellular organisms	37.12 %
Viruses	superkingdom	All Organisms → Viruses	6.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.76 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.76 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.76 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.52 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.76 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.76 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.52 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.76 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.52 %
EBPR siphovirus 2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → EBPR siphovirus 2	0.76 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3.03 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.52 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.76 %
EBPR siphovirus 2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → EBPR siphovirus 2	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_7144313	Not Available	1314	Open in IMG/M
2162886012\|MBSR1b_contig_327505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	952	Open in IMG/M
2162886013\|SwBSRL2_contig_4488777	All Organisms → Viruses → Predicted Viral	1505	Open in IMG/M
3300002074\|JGI24748J21848_1022190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	768	Open in IMG/M
3300004635\|Ga0062388_102936427	Not Available	503	Open in IMG/M
3300005093\|Ga0062594_100197093	Not Available	1398	Open in IMG/M
3300005093\|Ga0062594_100457732	Not Available	1059	Open in IMG/M
3300005148\|Ga0066819_1004848	Not Available	819	Open in IMG/M
3300005160\|Ga0066820_1003040	Not Available	857	Open in IMG/M
3300005163\|Ga0066823_10000289	Not Available	5413	Open in IMG/M
3300005163\|Ga0066823_10020143	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005165\|Ga0066869_10134891	Not Available	522	Open in IMG/M
3300005169\|Ga0066810_10032284	Not Available	942	Open in IMG/M
3300005169\|Ga0066810_10059649	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300005290\|Ga0065712_10516293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	639	Open in IMG/M
3300005294\|Ga0065705_10114551	All Organisms → Viruses → Predicted Viral	3626	Open in IMG/M
3300005331\|Ga0070670_101583567	Not Available	602	Open in IMG/M
3300005353\|Ga0070669_101317968	Not Available	625	Open in IMG/M
3300005354\|Ga0070675_101280344	Not Available	675	Open in IMG/M
3300005354\|Ga0070675_102079467	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005356\|Ga0070674_100077496	Not Available	2367	Open in IMG/M
3300005356\|Ga0070674_101533940	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005356\|Ga0070674_101812036	Not Available	553	Open in IMG/M
3300005356\|Ga0070674_102218181	Not Available	502	Open in IMG/M
3300005437\|Ga0070710_10109939	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300005526\|Ga0073909_10000410	All Organisms → cellular organisms → Bacteria	14275	Open in IMG/M
3300005526\|Ga0073909_10102093	Not Available	1135	Open in IMG/M
3300005526\|Ga0073909_10641024	Not Available	528	Open in IMG/M
3300005544\|Ga0070686_100007589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6058	Open in IMG/M
3300005618\|Ga0068864_102477241	Not Available	525	Open in IMG/M
3300005844\|Ga0068862_101415056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	699	Open in IMG/M
3300006057\|Ga0075026_100116898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1340	Open in IMG/M
3300006086\|Ga0075019_10468006	Not Available	778	Open in IMG/M
3300006358\|Ga0068871_100344195	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300006578\|Ga0074059_11197711	All Organisms → Viruses → Predicted Viral	1211	Open in IMG/M
3300006805\|Ga0075464_10431630	Not Available	802	Open in IMG/M
3300006805\|Ga0075464_10744802	Not Available	607	Open in IMG/M
3300009148\|Ga0105243_12092776	Not Available	601	Open in IMG/M
3300009168\|Ga0105104_10035522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2770	Open in IMG/M
3300009177\|Ga0105248_10180770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2377	Open in IMG/M
3300009553\|Ga0105249_11038610	Not Available	889	Open in IMG/M
3300010397\|Ga0134124_11455936	Not Available	712	Open in IMG/M
3300010401\|Ga0134121_11497331	Not Available	690	Open in IMG/M
3300011009\|Ga0129318_10081731	Not Available	893	Open in IMG/M
3300011106\|Ga0151489_1211871	Not Available	670	Open in IMG/M
3300011423\|Ga0137436_1015517	All Organisms → Viruses → Predicted Viral	1874	Open in IMG/M
3300011423\|Ga0137436_1039762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1190	Open in IMG/M
3300011438\|Ga0137451_1054622	Not Available	1175	Open in IMG/M
3300011444\|Ga0137463_1028669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	2028	Open in IMG/M
3300011444\|Ga0137463_1071310	Not Available	1302	Open in IMG/M
3300012122\|Ga0137332_1020368	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012232\|Ga0137435_1254147	Not Available	533	Open in IMG/M
3300012232\|Ga0137435_1281362	Not Available	503	Open in IMG/M
3300012951\|Ga0164300_10569746	Not Available	662	Open in IMG/M
3300012960\|Ga0164301_10742115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	744	Open in IMG/M
3300013296\|Ga0157374_10005086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11027	Open in IMG/M
3300013296\|Ga0157374_10300729	All Organisms → Viruses → Predicted Viral	1587	Open in IMG/M
3300013296\|Ga0157374_10729885	Not Available	1005	Open in IMG/M
3300013306\|Ga0163162_10538582	Not Available	1296	Open in IMG/M
3300013306\|Ga0163162_11838476	Not Available	693	Open in IMG/M
3300013308\|Ga0157375_11535584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	786	Open in IMG/M
3300013308\|Ga0157375_13532978	Not Available	520	Open in IMG/M
3300014325\|Ga0163163_10605030	Not Available	1159	Open in IMG/M
3300014811\|Ga0119960_1044919	Not Available	710	Open in IMG/M
3300014969\|Ga0157376_10056686	All Organisms → cellular organisms → Bacteria	3275	Open in IMG/M
3300015371\|Ga0132258_10430820	All Organisms → cellular organisms → Bacteria	3284	Open in IMG/M
3300015372\|Ga0132256_100991659	Not Available	956	Open in IMG/M
3300015372\|Ga0132256_102298973	Not Available	643	Open in IMG/M
3300015373\|Ga0132257_101920187	Not Available	762	Open in IMG/M
3300017792\|Ga0163161_10000227	All Organisms → cellular organisms → Bacteria	51612	Open in IMG/M
3300017792\|Ga0163161_10003063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11787	Open in IMG/M
3300017792\|Ga0163161_10688065	Not Available	850	Open in IMG/M
3300017792\|Ga0163161_11613928	Not Available	572	Open in IMG/M
3300018031\|Ga0184634_10063880	Not Available	1550	Open in IMG/M
3300018031\|Ga0184634_10152962	Not Available	1036	Open in IMG/M
3300018074\|Ga0184640_10350222	Not Available	669	Open in IMG/M
3300018083\|Ga0184628_10000060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	54722	Open in IMG/M
3300018083\|Ga0184628_10000292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	28989	Open in IMG/M
3300018083\|Ga0184628_10000603	Not Available	18926	Open in IMG/M
3300018083\|Ga0184628_10000865	All Organisms → cellular organisms → Bacteria → Proteobacteria	15473	Open in IMG/M
3300018083\|Ga0184628_10002830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	8267	Open in IMG/M
3300018083\|Ga0184628_10017677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3487	Open in IMG/M
3300018083\|Ga0184628_10044614	Not Available	2230	Open in IMG/M
3300018476\|Ga0190274_10375893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1365	Open in IMG/M
3300020016\|Ga0193696_1017731	Not Available	1918	Open in IMG/M
3300020579\|Ga0210407_11183482	Not Available	576	Open in IMG/M
3300020580\|Ga0210403_10232548	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300020580\|Ga0210403_11088660	Not Available	621	Open in IMG/M
3300020581\|Ga0210399_11290243	Not Available	576	Open in IMG/M
3300020581\|Ga0210399_11482546	Not Available	527	Open in IMG/M
3300021082\|Ga0210380_10116705	Not Available	1186	Open in IMG/M
3300021082\|Ga0210380_10160049	All Organisms → Viruses → Predicted Viral	1011	Open in IMG/M
3300021082\|Ga0210380_10324971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	701	Open in IMG/M
3300021168\|Ga0210406_10066321	Not Available	3114	Open in IMG/M
3300021168\|Ga0210406_10111576	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300021168\|Ga0210406_10719052	Not Available	768	Open in IMG/M
3300021180\|Ga0210396_11514317	Not Available	551	Open in IMG/M
3300021407\|Ga0210383_11250792	Not Available	622	Open in IMG/M
3300021478\|Ga0210402_10894209	Not Available	814	Open in IMG/M
3300022894\|Ga0247778_1005016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3118	Open in IMG/M
3300024179\|Ga0247695_1007316	All Organisms → Viruses → Predicted Viral	1570	Open in IMG/M
3300024224\|Ga0247673_1024992	Not Available	807	Open in IMG/M
3300025916\|Ga0207663_10802142	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300025918\|Ga0207662_11047936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	579	Open in IMG/M
3300025937\|Ga0207669_11478854	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300025937\|Ga0207669_11955421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	501	Open in IMG/M
3300025941\|Ga0207711_11370041	Not Available	650	Open in IMG/M
3300025941\|Ga0207711_11788052	Not Available	558	Open in IMG/M
3300026035\|Ga0207703_10957690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M
3300026088\|Ga0207641_10741792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	969	Open in IMG/M
3300026089\|Ga0207648_11387601	Not Available	660	Open in IMG/M
3300026118\|Ga0207675_101408804	Not Available	718	Open in IMG/M
3300027821\|Ga0209811_10000256	All Organisms → cellular organisms → Bacteria	24641	Open in IMG/M
3300027821\|Ga0209811_10070792	Not Available	1219	Open in IMG/M
3300027853\|Ga0209274_10432142	Not Available	681	Open in IMG/M
3300028065\|Ga0247685_1028541	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	670	Open in IMG/M
3300028138\|Ga0247684_1050226	Not Available	674	Open in IMG/M
3300028146\|Ga0247682_1016482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1286	Open in IMG/M
3300028293\|Ga0247662_1002960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → EBPR siphovirus 2	2394	Open in IMG/M
3300028380\|Ga0268265_12648551	Not Available	507	Open in IMG/M
3300028802\|Ga0307503_10000092	All Organisms → cellular organisms → Bacteria → Proteobacteria	49802	Open in IMG/M
3300031199\|Ga0307495_10000047	All Organisms → cellular organisms → Bacteria	7803	Open in IMG/M
3300031226\|Ga0307497_10420792	Not Available	643	Open in IMG/M
3300031226\|Ga0307497_10742468	Not Available	510	Open in IMG/M
3300031708\|Ga0310686_102819422	Not Available	1386	Open in IMG/M
3300031720\|Ga0307469_11758634	Not Available	598	Open in IMG/M
3300031740\|Ga0307468_100021078	All Organisms → cellular organisms → Bacteria → Proteobacteria	2880	Open in IMG/M
3300031740\|Ga0307468_101775633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300031753\|Ga0307477_10718047	Not Available	667	Open in IMG/M
3300032174\|Ga0307470_10303406	Not Available	1084	Open in IMG/M
3300032205\|Ga0307472_100039775	All Organisms → cellular organisms → Bacteria	2827	Open in IMG/M
3300034148\|Ga0364927_0189153	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	33.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	44.70%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	21.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.42%
Sediment	Environmental → Aquatic → Sediment	15.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.39%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Marine	Environmental → Aquatic → Marine	2.27%
Roots	Host-Associated → Plants → Roots	1.52%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.03%
Coastal	Environmental → Aquatic → Marine → Coastal	2.27%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.03%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.76%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012122	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0137.00001020	2162886011	Miscanthus Rhizosphere	MSIGLLFWVLMVLWLISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA
MBSR1b_0954.00000840	2162886012	Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA
SwBSRL2_0234.00006340	2162886013	Switchgrass Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYVYASEFLFFVLLFLLGWHAFGFVIHS
JGI24748J21848_10221903	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFL
Ga0062388_1029364272	3300004635	Bog Forest Soil	MSIGLLFWVLMILWFFSWIGTRFGGLAGPYLYASEFLFFALLFLLGWHAFGFVIHQ*
Ga0062594_1001970932	3300005093	Soil	MSIGLLFWVLMVLWLISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA*
Ga0062594_1004577321	3300005093	Soil	MSIGLLFWVLMVLWIVSWVGTRWGGLAGPYIYASEFLFFVLLFLL
Ga0066819_10048482	3300005148	Soil	MSIGLLFWVLMVFWILSWVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0066820_10030402	3300005160	Soil	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASELLFFILLFLLGWHSFGFVIHA*
Ga0066823_100002893	3300005163	Soil	MSIGLLFWVLMVFWILSWVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIH
Ga0066823_100201433	3300005163	Soil	SWVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0066869_101348911	3300005165	Soil	MSIGLLFWVLMVLWFVSWLGSVYGPNGYPWLHANNVLFFILLFLLGWHAFGFVIHA*
Ga0066810_100322842	3300005169	Soil	MSIGLLFWVLMVLWFVSWLGAIYGPGQYPWIHANSVLFFILLFLLGWHAFGFVIHS*
Ga0066810_100596492	3300005169	Soil	MSLGFIFWLLMILWFFSWGVSTWGGQSWPWAIHASTLLFFVLLFLLGWKVFGFVVQGA*
Ga0065712_105162933	3300005290	Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0065705_101145515	3300005294	Switchgrass Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYVYASEFLFFVLLFLLGWHAFGFVIHS*
Ga0070670_1015835672	3300005331	Switchgrass Rhizosphere	MSIGLLFWVLMVFWILSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFIIHA*
Ga0070669_1013179682	3300005353	Switchgrass Rhizosphere	LFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0070675_1012803441	3300005354	Miscanthus Rhizosphere	MSIGLLFWVLMVLWLISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAF
Ga0070675_1020794672	3300005354	Miscanthus Rhizosphere	SWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA*
Ga0070674_1000774966	3300005356	Miscanthus Rhizosphere	MSIGLLFWVLMVLWFFSWVTNTYSPGQFPWAVHASNLLFFVLLFLLGWHAFGFVIHA*
Ga0070674_1015339401	3300005356	Miscanthus Rhizosphere	ISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA*
Ga0070674_1018120361	3300005356	Miscanthus Rhizosphere	MSIGLLFWVLMVLWFFSYLGNAYAPGQYPWALHASSILFFVLLFLLGWKVFG
Ga0070674_1022181812	3300005356	Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA*
Ga0070710_101099394	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSIGLLFWVLMILWIVSWIGTRWGPYTSYVYASEFLFFVLLFLLGWHAFGFIIHA*
Ga0073909_100004103	3300005526	Surface Soil	MSIGLLFWVLMILWFISWLGTRWGPYSTYIYASELLFFILLFLLGWHSFGFVVHA*
Ga0073909_101020933	3300005526	Surface Soil	MSIGLLFWVLMVLWFFSWIGTTWGGLAGPYVHASTLLFFVLLFLLGWHAFGFVIHA*
Ga0073909_106410242	3300005526	Surface Soil	MSIGLLFWVLMILWFISWLGTRWGPYSTYVYASEFLFFVLLFLLGWHSFGFVVHA*
Ga0070686_10000758917	3300005544	Switchgrass Rhizosphere	LMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0068864_1024772411	3300005618	Switchgrass Rhizosphere	LGRDMMSIGLLFWVLMVLWFFSYLGNTYAPNQYPWAIHANHLLFFVLLFLLGWRAFGFVIHA*
Ga0068862_1014150561	3300005844	Switchgrass Rhizosphere	WVGTRWGGLAGPYIYASEFLFFVLLFLLGWHAFGFIIHA*
Ga0075026_1001168983	3300006057	Watersheds	LLFWILMILWMVSWVGTRFGPYTGYVYASDLLFFVLLFLLGWHDFGFILHG*
Ga0075019_104680062	3300006086	Watersheds	MSIGLLFWVLMVLWIVSWFGTRWGGFTGYVYASDFLFFVLLFLLGWHDFGFIIHQ*
Ga0068871_1003441951	3300006358	Miscanthus Rhizosphere	REPPSFNTKGEKQMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA*
Ga0074059_111977112	3300006578	Soil	MSIGLLFWVLMVLWFVSWLGSVYGPGGYPWLHANNVLFFILLFLLGWHAFGFVIHA*
Ga0075464_104316303	3300006805	Aqueous	MSIGLLFWILMILWFFSWIGVRWGGIGGPYGLYASELLFFVLLF
Ga0075464_107448022	3300006805	Aqueous	MSIGLLFWVLMILWFFSWMGTRWGGMTGPWLYASELLMFVLLFLLGWHAFGFVIHA*
Ga0105243_120927761	3300009148	Miscanthus Rhizosphere	KQMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA*
Ga0105104_100355223	3300009168	Freshwater Sediment	MSIGLLFWVLMVFWILSWVGTTWGGLGGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0105248_101807701	3300009177	Switchgrass Rhizosphere	GSAAGRATEIAATKEAAMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0105249_110386102	3300009553	Switchgrass Rhizosphere	MVLWLISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA*
Ga0134124_114559362	3300010397	Terrestrial Soil	WIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0134121_114973311	3300010401	Terrestrial Soil	TKEATMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA*
Ga0129318_100817312	3300011009	Freshwater To Marine Saline Gradient	MSIGLLFWVLMILWFFSWIGTRWGGLSGPYLYAGEFLFFVLLFLLGWHAFGFVIHA*
Ga0151489_12118711	3300011106	Soil	IGLLFWVLMVFWILSWVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0137436_10155173	3300011423	Soil	MSIGLLFWVLMVLWFFSWLFNTYGPQPNQYPWAMHASSMLFFVLLFLLGWKVFGFVIHA*
Ga0137436_10397623	3300011423	Soil	MSIGLLFWVLMVLWLVSWIGTRWGGIAGPYVYANEFLFFVLLFLLGWHAFGFIIHA*
Ga0137451_10546222	3300011438	Soil	MTMTIGLIFWILMLLWFVAWIGAVYGPGTYPWGHANSVLLFILLFLLGWHAFGFAVRA*
Ga0137463_10286691	3300011444	Soil	MSIGLLFWVLMVLWLVSWIGTRWGGIAGPYVYANEFLF
Ga0137463_10713103	3300011444	Soil	LFWVLMVLWFFSWLGTTWGGLGGPYVYAGNLLFFVLLFLLGWHAFGFVIHA*
Ga0137332_10203682	3300012122	Soil	VLMVLWFFSYLGNAYAPGQYPWAIHASSILFFVLLFLLGWKVFGFVIHA*
Ga0137435_12541473	3300012232	Soil	MTMSIGLIFWILMLLWFLSWVGSVYGPGQYPWVHASTVMLFILLFLLGWKAFGFAVHA*
Ga0137435_12813622	3300012232	Soil	MTIGLIFWILMLLWFVAWIGAVYGPGTYPWGHANSVLLFILLFLLGWHAFGFAVRA*
Ga0164300_105697462	3300012951	Soil	MSIGLLFWVLMILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWHAFGFVVHA*
Ga0164301_107421152	3300012960	Soil	MSIGLLFWVLMVFWILSWVGTTWGGVGGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0157374_100050862	3300013296	Miscanthus Rhizosphere	MSIGLIFWVIMLLWLLGFIGSVYAPGSYPYAHASSLMLFILLFLLGWHAFGFIIHA*
Ga0157374_103007292	3300013296	Miscanthus Rhizosphere	MSIGLLFWVLMVFWILSLVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIHA*
Ga0157374_107298852	3300013296	Miscanthus Rhizosphere	MSIGLLFWVLMVLWFFGWMTRTWAPQQFPWAIHASDMLFFVLLFLLGWHAFGFVIHA*
Ga0163162_105385823	3300013306	Switchgrass Rhizosphere	MSIGLLFWVLMVLWFFSWGTRTWGGTQYPWAIYANDILFFVLLFLLGWHAFGFVIHS*
Ga0163162_118384761	3300013306	Switchgrass Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEF
Ga0157375_115355843	3300013308	Miscanthus Rhizosphere	LFWVLMVFWILSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFIIHA*
Ga0157375_135329781	3300013308	Miscanthus Rhizosphere	TEIAATKEAAMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVIHA*
Ga0163163_106050301	3300014325	Switchgrass Rhizosphere	MSIGLLFWVLMVFWILSWIGTRWGGLTGPYLYASEFLFFV
Ga0119960_10449191	3300014811	Aquatic	FPVTIKRAMSIGLLFWVLMILWIVSWIGTRWGPYTSYVYASEFLFFILLFLLGWAAFGFIIHA*
Ga0157376_100566868	3300014969	Miscanthus Rhizosphere	VFWILSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFIIHA*
Ga0132258_104308201	3300015371	Arabidopsis Rhizosphere	EATMSIGLLFWVLMILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWHAFGFVVHA*
Ga0132256_1009916595	3300015372	Arabidopsis Rhizosphere	IGLLFWVLMVLWFFSWMSSTWAPGQFPWAIHASNLLFFVLLFLLGWHAFGFVIRA*
Ga0132256_1022989732	3300015372	Arabidopsis Rhizosphere	MSIGLLFWVLMILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWRAFGFVVHA*
Ga0132257_1019201872	3300015373	Arabidopsis Rhizosphere	MVIWIISWAATTWGGQAWPWAIHASTFLFFILLFLLGWKTFGFIIQG*
Ga0163161_1000022758	3300017792	Switchgrass Rhizosphere	MSIGLLFWVLMVFWILSWVGTTWGGLAGPYIHASTLLFFILLFLLGWHAFGFIIHA
Ga0163161_100030635	3300017792	Switchgrass Rhizosphere	MVLWFFSWVTNTYSPGQFPWAVHASNLLFFVLLFLLGWHAFGFVIHA
Ga0163161_106880651	3300017792	Switchgrass Rhizosphere	MSIGLLFWVLMVLWFFSWGTRTWGGTQYPWAIYANDILFFVLLFLLGWHAFGFVIHS
Ga0163161_116139281	3300017792	Switchgrass Rhizosphere	WVLMILWFFSWIGTRWGGLTGPYLYASELLFFILLFLLGWHSFGFVIHA
Ga0184634_100638802	3300018031	Groundwater Sediment	MSIGLLFWVLMVLWFFSWVTNTYSPGQFPWAVHASNLLFFVLLFLLGWHAFGFVIHA
Ga0184634_101529622	3300018031	Groundwater Sediment	MTIGLIFWILMLLWFISWIGSVYGPGQYPWVHANSVLIFILLFLLGWHAFGFAIRA
Ga0184640_103502223	3300018074	Groundwater Sediment	MSIGLLFWVLMVLWFFSWVTNTYSPGQFPWAVHASNLLFFVLLFLLGWHAF
Ga0184628_1000006068	3300018083	Groundwater Sediment	MSIGLLFWILMVLWFFSWLGNTYAPGQYPWAVHANSLLFFVLLFLLGWHAFGFVIRA
Ga0184628_1000029210	3300018083	Groundwater Sediment	MSIGLLFWVLMVLWFVSWLGAVYGPGQYPWVHASNVLFFILLFLLGWHAFGFVIHASVAPLTMIG
Ga0184628_100006035	3300018083	Groundwater Sediment	MSIGLLFWVLMVLWFFSWITNTYSPGQFPWAIHASNLLFFVLLFLLGWHAFGFVIHA
Ga0184628_1000086512	3300018083	Groundwater Sediment	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASELLFFILLFLLGWHSFGFVIHA
Ga0184628_100028307	3300018083	Groundwater Sediment	MSIGLLFWVLMILWFFSWVGTRWGGLTGPYLYASEFLFFVLLFLLGWKTFGFVIHA
Ga0184628_100176772	3300018083	Groundwater Sediment	MSIGLLFWVLMVLWFFSWVTNTYSPGQFPWAIHASNLLFFVLLFLLGWHAFGFVIHA
Ga0184628_100446144	3300018083	Groundwater Sediment	MSIGLIFWILMLLAFVSWLGATYGPAQYPWAIHANYVLFFILLFLLGWKVFGFAIHA
Ga0190274_103758933	3300018476	Soil	MSIGLLFWVLMVLWFFSYLGNTYAPSQYPWAIHANHLLFFVLLFLLGWRAFGFVIHA
Ga0193696_10177315	3300020016	Soil	MAKGTVFWILMILWFFSWIGVRWGGLSGPYLYASELLLFVLLFLLGWQNFGFVIH
Ga0210407_111834821	3300020579	Soil	MSIGLLYWILMILWFFSWIGVRFGNMTGPYLYASELLFFVLLFLLGWHDFGFVIHQ
Ga0210403_102325482	3300020580	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYSTYVYASEFLFFVLLFLLGWHAFGFIIHS
Ga0210403_110886603	3300020580	Soil	FSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHDFGFIIHQ
Ga0210399_112902432	3300020581	Soil	MSIGLLFWVLMTLWIFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHDFGFIIHQ
Ga0210399_114825462	3300020581	Soil	MSIGLLFWILMILWFFSWIGTRWGGLTGPYLYASELLFFILLFLLGWHDFGFVIHN
Ga0210380_101167054	3300021082	Groundwater Sediment	MSIGLLFWVLMVLWFFSWITQTYSPGQFPWAIHASNLLFFVLLFLLGWHAFGFVIHA
Ga0210380_101600491	3300021082	Groundwater Sediment	MTIGLIFWILMLLWFISWIGSVYGPGQYPWVHANSVLIFILLFLLGWHAFG
Ga0210380_103249712	3300021082	Groundwater Sediment	MSIGLLFWVLMVLWFFSYLGNAYAPGQYPWAIHASSLLFFVLLFLLGWKAFGFVIHA
Ga0210406_100663216	3300021168	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYTSYVYASEFLFFVLLFLLGWNAFGFIIHA
Ga0210406_101115762	3300021168	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYATYVYASEFLFFVLLFLLGWHDFGFIIHQ
Ga0210406_107190521	3300021168	Soil	LMVLWIVSWLGTRWGPYTSYVYASEFLFFVLLFLLGWHAFGFIIHA
Ga0210396_115143173	3300021180	Soil	MLLWIIAWFGNRFGGWAGPFVYASEFFVFCLFFLLGWHDFGFIIHQ
Ga0210383_112507922	3300021407	Soil	MSRGLLFWVLMILWFVSWLGTRWGPYGNYVYASELLFFVLLFLLGWAAFGFVIT
Ga0210402_108942093	3300021478	Soil	MSIGLLFWILMILWIVSWLGTRFGPYTGYVYASDFLFFVLLFLLGWHDFGFILHQ
Ga0247778_10050163	3300022894	Plant Litter	MSIGLLFWVLMVLWFFSYLGNTYAPNQYPWAIHANHLLFFVLLFLLGWRAFGFVIHA
Ga0247695_10073162	3300024179	Soil	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHS
Ga0247673_10249923	3300024224	Soil	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLL
Ga0207663_108021423	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VLMILWIVSWIGTRWGPYTSYVYASEFLFFVLLFLLGWHAFGFIIHA
Ga0207662_110479363	3300025918	Switchgrass Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVL
Ga0207669_114788541	3300025937	Miscanthus Rhizosphere	WLISWMGTRWGGLAGPYLYANEFLFFVLLFLLGWHAFGFIIHA
Ga0207669_119554212	3300025937	Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHA
Ga0207711_113700413	3300025941	Switchgrass Rhizosphere	VLMVLWFFSWVTNTYSPGQFPWAVHASNLLFFVLLFLLGWHAFGFVIHA
Ga0207711_117880521	3300025941	Switchgrass Rhizosphere	MSIGLLFWVLMVLWFFSWLGTVYSPGQFPWAVHGSALLFFVLLFLLGWHAF
Ga0207703_109576901	3300026035	Switchgrass Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHSFGFVI
Ga0207641_107417924	3300026088	Switchgrass Rhizosphere	VLMVFWILSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFIIHA
Ga0207648_113876011	3300026089	Miscanthus Rhizosphere	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASELLFFILLFLLGW
Ga0207675_1014088042	3300026118	Switchgrass Rhizosphere	MSIGLLFWVLMVLWIVSWVGTRWGGLAGPYIYASEFLFFVLLFLLGWHAFGFIIHA
Ga0209811_1000025640	3300027821	Surface Soil	MSIGLLFWVLMILWFISWLGTRWGPYSTYIYASELLFFILLFLLGWHSFGFVVHA
Ga0209811_100707925	3300027821	Surface Soil	MSIGLLFWVLMVLWFFSWIGTTWGGLAGPYVHASTLLFFVLLFLLGWHAFGFVIHA
Ga0209274_104321423	3300027853	Soil	MSIGLLFWVLMVLWFFSYAGTKWGGLGGPYLYMNDLLTWVLFFLVGWK
Ga0247685_10285411	3300028065	Soil	ADMSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASEFLFFVLLFLLGWHAFGFVIHS
Ga0247684_10502262	3300028138	Soil	MSIGLLFWVLMVLWFVSWLGAVYGPGQYPWVHASNVLFFILLFLLGWHAFGFVIHS
Ga0247682_10164822	3300028146	Soil	MSIGLLFWILMILWFFSWVGVRWGGLTGPFVYASEFLFFVLLFLLGWHDFGFVIHA
Ga0247662_10029602	3300028293	Soil	MSIGLLFWVLMVLWFFSWGASTWGGTSWPWAAHANSLLFFVLLFLLGWHSFGFVIHD
Ga0268265_126485511	3300028380	Switchgrass Rhizosphere	SWVGTRWGGLAGPYIYASEFLFFVLLFLLGWHAFGFIIHA
Ga0307503_1000009247	3300028802	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYTTYIYASEFLFFVLLFLLGWHAFGFIIHA
Ga0307495_100000477	3300031199	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYTTYVYASEFLFFVLLFLLGWHAFGFIIHA
Ga0307497_104207921	3300031226	Soil	MSIGLLFWVLMILWIVSWIGTRWGPYTTYVYASEFLFFVLLFLLGWH
Ga0307497_107424682	3300031226	Soil	SHRRDHEEEAMSIGLLFWVLMVLWFFSWVTQTYSPGQFPWAIHASNLLFFVLLFLLGWHAFGFVIHA
Ga0310686_1028194224	3300031708	Soil	MSIGLLFWVLMILWFFSWIGTRWGGLTGPYLYASELLFFVLLFLLGWHAFGFVIHS
Ga0307469_117586341	3300031720	Hardwood Forest Soil	TRKAQEAQGRPTMSIGLLFWVLMILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWRAFGFVVHA
Ga0307468_1000210784	3300031740	Hardwood Forest Soil	MTIGLLFWVLMILWIVSWIGTRWGPYTTYVYASEFLFFVLLFLLGWHAFGFIVRA
Ga0307468_1017756332	3300031740	Hardwood Forest Soil	MSIGLLFWVLMILWIVSWIGTRWGPYGTYVYASEFLFFVLLFLLGWHAFGFIIHA
Ga0307477_107180473	3300031753	Hardwood Forest Soil	MSIGLLFWILMILWFFSWLGVRWGGLSGPYVYASELLFFVLLFLLGWHDFGFVIHS
Ga0307470_103034062	3300032174	Hardwood Forest Soil	MSIGLLFWVLMILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWHAFGFVVHA
Ga0307472_1000397755	3300032205	Hardwood Forest Soil	ILWFISWLGTRWGPYSTYVYASELLFFILLFLLGWRAFGFVVHA
Ga0364927_0189153_1_147	3300034148	Sediment	MSIGLLFWVLMVLWFFSYLGNAYAPGQYPWALHASSILFFVLLFLLGWK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences