Metagenome / Metatranscriptome Family F060945

Basic Information
Family ID	F060945
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	49 residues
Representative Sequence	EEFKRVQTRQLEYKSITDPRISETGPSGNPFLGARRVDLGGGTSGKK
Number of Associated Samples	116
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.152 % of family members)
Environment Ontology (ENVO)	Unclassified (26.515 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.818 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.67% Coil/Unstructured: 97.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF04984	Phage_sheath_1	97.73
PF14065	Pvc16_N	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	97.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.73%
Host-Associated	Host-Associated	26.52%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.91%
Plants	Host-Associated → Plants	23.48%
Aquatic	Environmental → Aquatic	6.82%
Human	Host-Associated → Human	3.03%
Wastewater	Engineered → Wastewater	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Sediment	Environmental → Aquatic → Sediment	3.03%
Peat	Environmental → Terrestrial → Peat	3.03%
Digestive System	Host-Associated → Human → Digestive System	3.03%
Roots	Host-Associated → Plants → Roots	3.03%
Marine	Environmental → Aquatic → Marine	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.03%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.03%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.27%
Ice	Environmental → Aquatic → Freshwater → Ice	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.03%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.27%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.76%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.03%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.03%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.03%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000828	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate C) D5C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003569	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005656	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-Kit	Engineered	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034675	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12467J12023_10734071	3300000828	Soil	EEFKRVQSRELIYKSIPDPRISETGPSGNPFLGARRLDLGGASGAKK*
JGI1027J12803_1066642112	3300000955	Soil	LEEFKRVQTRQLEYKSITDPRVSETGPIGNPFLAARRLDLGGGTPGKK*
Ga0007417J51691_10361691	3300003544	Avena Fatua Rhizosphere	AIPILPEKLEEFKRVQTRQLEYKSITDPRISETGPSGNPFLEARRLDLGGGSSGKK*
Ga0007420J51693_10303211	3300003569	Avena Fatua Rhizosphere	EKLEEFKRVQSRQLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0063455_1016652171	3300004153	Soil	VQTRQLEYKSITDPRISETGPSGNPFLEARRLDLGGGSSGKK*
Ga0058858_10094261	3300004785	Host-Associated	IPILPEKLEEFKRVQTRQLEYKSITDPRVSETGPSGNPLMAARRLDLGGGTPGKK*
Ga0058859_100922021	3300004798	Host-Associated	RVQTRQLEYKSITDPRVAETGPSGNPFMAARRLDLGGGTPGKK*
Ga0058859_101423891	3300004798	Host-Associated	KRVQTRQLEYKSITDPRVSETGPSGNPLMAARRLDLGGGTPGKK*
Ga0058860_100706551	3300004801	Host-Associated	EEFKRVQSRRLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0068998_101084712	3300005213	Natural And Restored Wetlands	WTAIPILPEKLEEFKRVQSRSLEYKSITDPKVSEQGPSGNPFLGGRRLALGGDKK*
Ga0066388_1080004711	3300005332	Tropical Forest Soil	PEKLEEFKRVQTRQLEYKSITDPRISETGPSGNPFLGARRVDLGGGTPGKK*
Ga0066388_1082517622	3300005332	Tropical Forest Soil	LEEFKRVQTRQLEYKSITDPRISETGPNGTPFLGARRLDLGGGGTPAKK*
Ga0068869_1020678301	3300005334	Miscanthus Rhizosphere	EFKRVQTRQLEYKSITDPRISEQGPSGNPFLGGRRVDLGGGSPGKK*
Ga0068868_1008774601	3300005338	Miscanthus Rhizosphere	WTAIPILPEKLEEFKRVQSRRLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0070688_1000489001	3300005365	Switchgrass Rhizosphere	PILPEKLEEFKRVQSRRLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0070713_1013505701	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AIQAWTAIPILPERLEEFKRVQQRSLEYRSITDPRVSERGPSGSPFLGARKLDLTGGAKK
Ga0070681_113468932	3300005458	Corn Rhizosphere	QAWTAIPILPEKLEEFKRVQSRRLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0070699_1013784601	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RQLEYKSIPDPRISETGPSGNPFLGARRLDLGGGGGGKK*
Ga0070695_1005512061	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	WTAIPILPEKLEEFKRVQSRQLEYKSITDPRISETGPSGNPFLGPPRRVDLGGGPGKK*
Ga0068864_1018837431	3300005618	Switchgrass Rhizosphere	PILPEKLEEFKRVEVRQLEYKSMTEPRTPIEEGPNGNPFLGARRLDLGGPPKK*
Ga0073902_103650041	3300005656	Activated Sludge	PAIQAWTAVPVLPMQLDEFKRVQSRQLEYKSITDPRISETGPSGNPFLGSRRLDLGGAATKK*
Ga0066905_1022659751	3300005713	Tropical Forest Soil	WSAIPIIPERLEEFKRVQSRQLEYKSITDSRISETGPSGPNPFARWLNLGGNPKK*
Ga0068870_106366181	3300005840	Miscanthus Rhizosphere	PAIQAWTAIPILPDRLEEFKRVQSRQLEYKSITDPRVKETGPSGSPYLATRRLDLGGGTSGKK*
Ga0068863_1006805221	3300005841	Switchgrass Rhizosphere	RQLEYKSIIDPRVKETGPSGSPYLATRRLDLGGGTSGKK*
Ga0068858_1016610381	3300005842	Switchgrass Rhizosphere	RLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0068862_1010916051	3300005844	Switchgrass Rhizosphere	RVQTRQLEYKSITDPRVKETGPSGSPYLATRRLDLGGGTSGKK*
Ga0068871_1010636492	3300006358	Miscanthus Rhizosphere	TRQLEYKSITEPRTPIEEGPNGNPFLGNRRLELGGPPKK*
Ga0068871_1019912811	3300006358	Miscanthus Rhizosphere	LPERLEEFKRVQTRQLEYKSITDPRISELGPSGSPFLGARRLDLTGAKK*
Ga0074060_104462101	3300006604	Soil	VQSRRLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0075521_103363231	3300006642	Arctic Peat Soil	VRQLEYKSMTEPATLIEEGPNGNPFLGARRLDLGGPPKK*
Ga0079218_130634732	3300007004	Agricultural Soil	EKLEEFKRVQTRQLEYKSITDPRISETGPSGSPFLSARKLDLGGAGDKK*
Ga0105245_104364411	3300009098	Miscanthus Rhizosphere	LEEFKRVQSRQLEYKSIIDPRVKETGPSGSPYLATRRLDLGGGTSGKK*
Ga0105243_111118561	3300009148	Miscanthus Rhizosphere	LEELRRVQERKLEYKSITDPRISEQGPSGNPFLGAKRLDLGGGGKK*
Ga0075423_118316741	3300009162	Populus Rhizosphere	VQAWTAIPILPERLEEFKRVQTRQLEYKSITDPRVAETGPSGNPFLGARRLDLGGGGGGTPVKK*
Ga0105104_109399882	3300009168	Freshwater Sediment	YKSITDPRVNEEGPNGNPFLGARKLDLGGSSGAKK*
Ga0105242_128167442	3300009176	Miscanthus Rhizosphere	ILPERLQEFKRVQVRQLEYKSLTDPRISETGPNGHPFLGARRLDLAGTPPKK*
Ga0126304_111671701	3300010037	Serpentine Soil	YKSITDPRVSETGPSGNPFLGAKRLDLGGGAAPKK*
Ga0126380_108723601	3300010043	Tropical Forest Soil	VQAWTAIPIIPERLEEFKRVQSRQLEYRSITDPRISETGPSGTPFLAARRLDLGGGDKK*
Ga0126382_105766261	3300010047	Tropical Forest Soil	RLEEFKRVQTRQLEYKSITDPRISEQGPNGNPFLAARRLDLGGGTPGKK*
Ga0126382_119072241	3300010047	Tropical Forest Soil	FRRVQSRQLEYKSITDPRVSETGPSGNPFLAARRLDLGGGEKK*
Ga0127481_10286031	3300010101	Grasslands Soil	QLEYKSITDPRISEQGPNGNPFLGARPLDLGGGGTAPKK*
Ga0126370_104055162	3300010358	Tropical Forest Soil	VQSRQLEYKSINDPRVSETGPSGNPFLGGRRLDLGGGEKK*
Ga0126370_125594021	3300010358	Tropical Forest Soil	QLEYKSITDPRVSEQGPSGNPFLGARRVDLGGSGKK*
Ga0126372_123614331	3300010360	Tropical Forest Soil	RQLEYKSIPDPRISETGPSGNPFLGARRLDLGGGGGGAKK*
Ga0126377_128123521	3300010362	Tropical Forest Soil	DFKRVQSRQLEYKSITDPRVSETGPSGPNPFAKWLNLGQPKK*
Ga0134126_119937472	3300010396	Terrestrial Soil	EFKRVQIRQLEYKSVTEPRTPMEKGPNGNPFLGARRLDLAGSKSDGKK*
Ga0134123_104735572	3300010403	Terrestrial Soil	FKRVQTRQLEYKSISDPRISETGPSGNPFLGPPRRVDLGGGSGKK*
Ga0127502_101646011	3300011333	Soil	LEYKSITDPKVSELGPSGPFLGTRRLDLGGSTKK*
Ga0137442_11012932	3300011414	Soil	RQLEYKSITDPRVSETGPSGNPFLAARRLDLGGTPGKK*
Ga0137432_12370481	3300011439	Soil	TAIPILPEKLEEFQRVQTRKLEYKSITDPRISETGPSGNPFTGARRLDLGGGGKK*
Ga0137461_11596111	3300012040	Soil	TAIPILPEKLEEFKRVQTRQLEYKSITDPRISETGPSGSPFLGARRLDLGGGGSSSGKK*
Ga0136638_104600031	3300012094	Polar Desert Sand	LNQPIRPAVQAFTAIPILPERLEEFRRVQTRQLEYKSITDPKISETGPSGNPFLGAKRLDLGGGSAKK*
Ga0137334_10077401	3300012179	Soil	VRPAVQAWTAIPILPEKLEEFKRVQTRQLEYKSITDPRVSETGPSGNPFLAARRLDLGGGTPGKK*
Ga0137376_117574062	3300012208	Vadose Zone Soil	RPAVQAWTAIPILPEKLEEFKRVQSRSLEYKSITDPKISETGPSGNPFFGTRRLDLGGGAKK*
Ga0137378_112770371	3300012210	Vadose Zone Soil	KLEEFKRVQSRRLEYKSITDPQVSEVGPSGNPFLAARRLDLGGGPGKK*
Ga0150985_1016743651	3300012212	Avena Fatua Rhizosphere	PEKLEEFKRVQTRQLEYKSITDPRISETGPSGSPFLAARRLDLGGGTPGKK*
Ga0150985_1112447581	3300012212	Avena Fatua Rhizosphere	PERLEEFKRVQTRQLEYKSITDPRVSETGPSGNPFLGGRRIDLGGG*
Ga0150985_1179416791	3300012212	Avena Fatua Rhizosphere	KLEEFKRVQSRQLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK*
Ga0134040_11233381	3300012389	Grasslands Soil	PAVQAWTAIPILPERLEEFKRVQTRQLEYKSITDPRISEQGPNGNPFLGARRLDPGGGGTAPKK*
Ga0134043_10654162	3300012392	Grasslands Soil	AIPILPEKLEEFRRVQERRLEYKSITDPRISEQGPSGNPFLGARRLDLGGGSGKK*
Ga0134055_11330392	3300012401	Grasslands Soil	WTAIPILPERLEEFKRVQTRQLEYKSITDPRISEQGPSGNPFLGAKRLDLSGGAKK*
Ga0134024_10393141	3300012404	Grasslands Soil	EEFKRVQQRQLEYKSITDPRISEQGPSGNPFLGAKRLDLSGGAKK*
Ga0150984_1026192542	3300012469	Avena Fatua Rhizosphere	QAWTAIPILPEKLEEFKRVQTRTLEYKSITDPKISEQGPNGNPFSASRRLDLGGGTKK*
Ga0150984_1162327042	3300012469	Avena Fatua Rhizosphere	PERLEEFKRVQTRQLEYKSITDPRVSETGPSGNPFLGGRRIDLGGGGKK*
Ga0150984_1170790992	3300012469	Avena Fatua Rhizosphere	LEYKSMTESRTPIEEGPNGNPFLGARRLDLGGTPKK*
Ga0150984_1209738032	3300012469	Avena Fatua Rhizosphere	VAYKSITDPKINETGPNGSPFLGARRLDLGGSGGGEKK*
Ga0157310_101523412	3300012916	Soil	EYKSIIDPRVTEQGPSGHNPFLAARRLDLGGTPGSKK*
Ga0137413_112974622	3300012924	Vadose Zone Soil	ILPEKLDEFKRVQTRHLEYKSITDPRISERGPSGNPFLGVRRLDLGGGASGKK*
Ga0126369_133532471	3300012971	Tropical Forest Soil	IPIVPEKLEDFRRVQSRQLEYKSITDPRISETGPSGNPFLTTRRLDLGGGTGKK*
Ga0164305_116859431	3300012989	Soil	AWTAIPILPEKLDEFKRVQTRQLEYKSITDPRISEQGPNGNPFLGSRRLDLGGGGKK*
Ga0157378_128298131	3300013297	Miscanthus Rhizosphere	RELQYKSITDPRVSETGPSGNPFLGARRLDLGGGTAKK*
Ga0163163_125310892	3300014325	Switchgrass Rhizosphere	LEEFRRVQSRQLEYRSITDPRVSETGPSGQPFLAARRLDLGGGDKK*
Ga0182000_106680291	3300014487	Soil	RQLEYKSITDPRISEQGPSGNPFLGGRRVDLGGGSSGKK*
Ga0182021_104209321	3300014502	Fen	KRVQTRQLEYKSITDPRVSETGPSGNPFLSARRLDLGGTPPGPGDKPKK*
Ga0173483_106104491	3300015077	Soil	QTRQLEYKSITDPKVVEIGPNGNPFLTAKRLDLGGGGAPKK*
Ga0187777_110473042	3300017974	Tropical Peatland	QAWTAVPILPEKLEAFKRVESPASINYKSLTEPGTPVEIGPIGNPFLGAKRLDLGGGSGK
Ga0066669_107010621	3300018482	Grasslands Soil	IPDKLEEFRRVQTRQLEYKSITDPRVSETGPSGSPFLAARRLDLGGGSGKK
Ga0187894_101503982	3300019360	Microbial Mat On Rocks	QAWTAIPILPEKLEEFRRVQTRQLEYKSITDPRVSETGPSGNPFLGARRLDIGGGAGKK
Ga0173482_107398451	3300019361	Soil	IPILPEKLEEFQRVQTRKLEYKSITDPRISEQGPSGNPFLGGRRLDLGGGAGKK
Ga0209584_101875241	3300025878	Arctic Peat Soil	PEKLEEFKRVEVRQLEYKSMTEPATLIEEGPNGNPFLGARRLDLGGPPKK
Ga0207642_105126981	3300025899	Miscanthus Rhizosphere	DRLEEFKRVQSRQLEYKSITDPRVKETGPSGSPYLATRRLDLGGGTSGKK
Ga0207643_105169512	3300025908	Miscanthus Rhizosphere	PAIQAWTAIPILPDRLEEFKRVQSRQLEYKSITDPRVKETGPSGSPYLATRRLDLGGGTSGKK
Ga0207658_106509951	3300025986	Switchgrass Rhizosphere	IIPEKLDEFKRVQTRQLEYKSITDPRISERGPSGNPFLSARRLDLGGGAGKK
Ga0207703_120237391	3300026035	Switchgrass Rhizosphere	RLEYKSITDPRVSEVGPSGNPFLAARRLDLGGGTGKK
Ga0207641_102324162	3300026088	Switchgrass Rhizosphere	LEEFKRVQTRQLEYKSITDPRVSETGPSGNPLMAARRLDLGGGTPGKK
Ga0307515_100394951	3300028794	Ectomycorrhiza	QTRQLEYKSITDPRITETGPSGNPFIAARRLDLGGGTPGKK
Ga0302163_100499192	3300028868	Fen	VRPAVQAWTAIPILPERLEEFKRVQTRQLEYKSITDPGVSEQGPNGNPFLGARRIDLGGGGGKK
Ga0302255_10150282	3300030050	Fen	QLEYKSITDPGVSEQGPNGNPFLGARRIDLGGGGGKK
Ga0311349_104524092	3300030294	Fen	AIPILPEKLEEFKRVQTRQLEYKSITDPRVSETGPSGNPFLGARRIDLGGGSGKK
Ga0308152_1105011	3300030831	Soil	EKLEEFKRVQTRQLEYKSITDPRISETGPSGSPFLAARRLDLGGGTPGKK
Ga0308178_10179572	3300030990	Soil	AIPILPEKLEEFKRVQTRQLEYKSITDPRISELGPSGHPFLGGRRVDLGGGTSGKK
Ga0308178_10700932	3300030990	Soil	AIPILPEKLEEFKRVQTRQLEYKSITDPRISETGPSGNPFLAARRLDLGGGTPGKK
Ga0308185_10569382	3300031081	Soil	ILPEKLEEFKRVQTRQLEYKSITDPRISEIGPSGSPFLAARRLDLGGGTPGKK
Ga0308197_101047892	3300031093	Soil	VQTRQLEYKSITDPRISEIGPSGSPFLAARRLDLGGGTPGKK
Ga0308193_10366851	3300031096	Soil	LEYKSITDPRISERGPSGSPFLGARRLDLSGGGGAAKK
Ga0308180_10402062	3300031100	Soil	VRPAVQAWTAIPILPEKLDEFKRVQTRQLEYKSITDPRISERGPSGNPFLSARRLDLGGGAGKK
Ga0308151_10394742	3300031124	Soil	DEFKRVQTRHLEYKSITDPRISERGPSGNPFLGVRRLDLGGGASGKK
Ga0170824_1079412291	3300031231	Forest Soil	KRVEVRQLEYKSMTEPATLIEEGPNGNSFLGARRLDLGGPPKK
Ga0308194_100939722	3300031421	Soil	QLEYKSITDPRVSETGPSGNPFLAARRLDLGGGTPGKK
Ga0308194_101726611	3300031421	Soil	AIPILPERLEEFKRVQTRQLEYKSITDPRISEPGPGNPFLAARRLDLGGLGGGTPGKK
Ga0308177_10132391	3300031423	Soil	KRVQTRHLEYKSITDPRISERGPSGNPFLGVRRLDLGGGASGKK
Ga0308179_10228802	3300031424	Soil	EEFKRVQTRQLEYKSITDPRISETGPSGNPFLGARRVDLGGGTSGKK
Ga0310888_105010871	3300031538	Soil	EFKRVQERKLEYKSITDPRISEQGPSGNPFLGAKRLDLGGGGASKK
Ga0310686_1145626101	3300031708	Soil	QARQLQYKSITDPRINEQGPNGNPFLGARRLDLGGSGGATKK
Ga0307405_113863922	3300031731	Rhizosphere	VRPAVQAWTAIPILPEKLEEFKRVQTRQLEYKSITDPRVSETGPSGNPFLGARRLDLGGGGGTPAKK
Ga0310907_101438652	3300031847	Soil	EYKSITDPRISEQGPNGNPFLGAKRLDLGGGNTGGAGKK
Ga0302322_1011760272	3300031902	Fen	EFRRVQTRRLEYKSITDPRVSETGPSGNPFFSARRLDLGGGTPGKK
Ga0310897_102923721	3300032003	Soil	FQRVQQRRLEYKSLHDSRVAEQGPNGNPFLGSRRLDLPGAGGGKK
Ga0310906_101626911	3300032013	Soil	VQAWTAIPILPEKLEEFQRVQTRKLEYKSITDPRISETGPSGNPFLGARRLDLGGGAGKK
Ga0307471_1041922342	3300032180	Hardwood Forest Soil	TVIPILPEKLEEFRRVQTRQLEYKSITDPKISETGPSGNPFLGGRRLDLGGGKK
Ga0335397_111051242	3300032420	Freshwater	QLEYKSITDPKIAEIGPSGSPFLAAKRLDLGGPGAPKK
Ga0316605_102866821	3300033408	Soil	PILPERLEEFKRVQTRQLEYKSITDPRISEQGPSGNPFLGARRLDLGGGGTTPAKK
Ga0316613_111531521	3300033434	Soil	YKSITDPKISEIGPSGSPFLGAKRLDLGGGGAPKK
Ga0316629_101857731	3300033483	Soil	SRQLEYKSITDPKISETGPSGNPFLSARRLDLGGTPGGKK
Ga0370485_0305297_412_522	3300034358	Untreated Peat Soil	EYKSITDPRISETGPSGNPFLGARRLDLGGGTPGKK
Ga0370544_19840_1_114	3300034447	Soil	LEYKSITDPRISERGPSGNPFLGVRRLDLGGGASGKK
Ga0370548_090936_459_605	3300034644	Soil	LEEFKRVQTRQLEYKSITDPRISETGPSGNPFLGSRRVDLGGGTSGKK
Ga0314781_137294_3_188	3300034660	Soil	AVQAWTAIPILPEKLEEFRRVQERRLEYKSITDPRISEQGPSGQPFLGAKRLDLGGAPDK
Ga0314782_104171_3_164	3300034661	Soil	PILPEKLEEFTRVQTRRLEYKSITDPRISEQGPSGNPFLGARRLDLGGGGGKK
Ga0314783_035016_2_145	3300034662	Soil	EEFKRVQTRQLEYKSITDPRISETGPSGNPFLGPPRRVDLGGGSGKK
Ga0314783_108091_462_599	3300034662	Soil	KRVQTRQLEYKSINDPRISEKGPIGNPFLGARRLDLGGGGVPAKK
Ga0314784_046827_601_780	3300034663	Soil	WTAIPILPEKLEEFKRVQTRQLEYKSITDPRVAETGPSGGPFLGTRRLDLGGGGTPAKK
Ga0314784_070183_558_680	3300034663	Soil	EYKSITDPRISEQGPSGNPFMGGRRLDLGGGGGGTPPAKK
Ga0314787_054176_522_665	3300034665	Soil	LEEFKRVQTRQLEYKSINDPAISEIGPSGNGFLDSKRLDLDGGAAKK
Ga0314792_035128_885_1037	3300034667	Soil	EKLEEFQRVQQRRLEYKSLHDSRVAEQGPNGNPFLGSRRLDLPGAGGGKK
Ga0314792_143970_2_109	3300034667	Soil	YKSITDPRISETGPSGNPFLGPPRRVDLGGGSGKK
Ga0314793_043722_661_798	3300034668	Soil	FKRVQERKLEYKSITDPRISEQGPSGNPFLGAKRLDLGGGGASKK
Ga0314793_101608_1_183	3300034668	Soil	QAWTAIPILPEKLEEFKRVQTRQLEYKSITDPRISETGPSGNPFLGPPRRVDLGGGSGKK
Ga0314795_014218_1012_1128	3300034670	Soil	QLEYKSITDPRISETGPSGNPFLGPPRRVDLGGGSGKK
Ga0314796_056526_3_143	3300034671	Soil	FKRVQSRQLEYKSITDPKVSETGPSGNPYIAARRLDLGGGGTPGKK
Ga0314800_065409_3_161	3300034675	Soil	EKLEEFKRVQTRQLEYKSITDPRVGETGPSGNPFVGARRLDLGGGGGTPAKK
Ga0370546_089314_388_522	3300034681	Soil	FRRVQERKLEYKSITDPRISEQGPSGNPFLGARRLDLGGGAGKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060945

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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