Metagenome Family F060909

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060909
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	69 residues
Representative Sequence	MKRKGFYIKKAENGLYLNIFKADFIEYINEQPGDWIKFKIFEKQDDPKGFTHNMEIIQQKEKPTNIVD
Number of Associated Samples	83
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.34 %
% of genes near scaffold ends (potentially truncated)	17.42 %
% of genes from short scaffolds (< 2000 bps)	65.91 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (87.879 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (21.970 % of family members)
Environment Ontology (ENVO)	Unclassified (60.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.788 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.42% β-sheet: 28.12% Coil/Unstructured: 61.46%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF04466	Terminase_3	15.15
PF08299	Bac_DnaA_C	9.09
PF04860	Phage_portal	2.27
PF01870	Hjc	0.76
PF00145	DNA_methylase	0.76
PF04233	Phage_Mu_F	0.76
PF04586	Peptidase_S78	0.76
PF01079	Hint	0.76
PF12705	PDDEXK_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	15.15
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	9.09
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.76
COG1591	Holliday junction resolvase Hjc, archaeal type	Replication, recombination and repair [L]	0.76
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
All Organisms	root	All Organisms	12.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
cellular organisms	root	All Organisms → cellular organisms	6.82 %
Viruses	superkingdom	All Organisms → Viruses	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.30 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.03 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.79 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	3.03 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	1.52 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.79 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3.03 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.52 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.79 %
Smithella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella	3.03 %
unclassified Sphingobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales	1.52 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.79 %
unclassified Smithella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella	3.03 %
Sphingobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	1.52 %
crAss-like viruses	clade	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.79 %
Smithella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	3.03 %
unclassified Crassvirales	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales	1.52 %
Sphingobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.79 %
Smithella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	3.03 %
Podoviridae sp. ctrTa16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa16	1.52 %
Sphingobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	1.52 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002363\|B570J29624_103259	Not Available	1065	Open in IMG/M
3300002835\|B570J40625_100257097	Not Available	1813	Open in IMG/M
3300003430\|JGI25921J50272_10069308	Not Available	771	Open in IMG/M
3300004112\|Ga0065166_10251986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	710	Open in IMG/M
3300005662\|Ga0078894_10072355	Not Available	2981	Open in IMG/M
3300005662\|Ga0078894_10517234	Not Available	1070	Open in IMG/M
3300005662\|Ga0078894_11294295	Not Available	613	Open in IMG/M
3300006484\|Ga0070744_10009051	Not Available	2960	Open in IMG/M
3300007559\|Ga0102828_1035860	Not Available	1126	Open in IMG/M
3300008107\|Ga0114340_1003232	Not Available	18294	Open in IMG/M
3300008110\|Ga0114343_1140354	Not Available	784	Open in IMG/M
3300008113\|Ga0114346_1139498	Not Available	1051	Open in IMG/M
3300008113\|Ga0114346_1214164	Not Available	755	Open in IMG/M
3300008119\|Ga0114354_1037051	Not Available	5049	Open in IMG/M
3300008258\|Ga0114840_1034106	Not Available	827	Open in IMG/M
3300008266\|Ga0114363_1008984	Not Available	4823	Open in IMG/M
3300008267\|Ga0114364_1088297	Not Available	996	Open in IMG/M
3300008448\|Ga0114876_1033866	Not Available	2466	Open in IMG/M
3300008448\|Ga0114876_1037612	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300008448\|Ga0114876_1076375	Not Available	1406	Open in IMG/M
3300008448\|Ga0114876_1114676	Not Available	1045	Open in IMG/M
3300008448\|Ga0114876_1157325	Not Available	821	Open in IMG/M
3300008448\|Ga0114876_1211231	Not Available	644	Open in IMG/M
3300008450\|Ga0114880_1080318	Not Available	1304	Open in IMG/M
3300008450\|Ga0114880_1082082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1284	Open in IMG/M
3300008450\|Ga0114880_1126174	Not Available	954	Open in IMG/M
3300009085\|Ga0105103_10139701	Not Available	1276	Open in IMG/M
3300009159\|Ga0114978_10404416	Not Available	817	Open in IMG/M
3300009179\|Ga0115028_10799880	Not Available	734	Open in IMG/M
3300009183\|Ga0114974_10099846	Not Available	1870	Open in IMG/M
3300009419\|Ga0114982_1005956	Not Available	4642	Open in IMG/M
3300009419\|Ga0114982_1011703	Not Available	3076	Open in IMG/M
3300010885\|Ga0133913_11066245	Not Available	2084	Open in IMG/M
3300011010\|Ga0139557_1077808	Not Available	552	Open in IMG/M
3300011334\|Ga0153697_1091	Not Available	30010	Open in IMG/M
3300011339\|Ga0153700_10869	Not Available	14256	Open in IMG/M
3300012013\|Ga0153805_1090226	Not Available	520	Open in IMG/M
3300012663\|Ga0157203_1000245	Not Available	18058	Open in IMG/M
3300012663\|Ga0157203_1021635	Not Available	936	Open in IMG/M
3300012665\|Ga0157210_1026086	Not Available	927	Open in IMG/M
3300013004\|Ga0164293_10034868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	4154	Open in IMG/M
3300013004\|Ga0164293_10290993	Not Available	1136	Open in IMG/M
3300013005\|Ga0164292_10093335	Not Available	2279	Open in IMG/M
3300013372\|Ga0177922_10332804	Not Available	654	Open in IMG/M
3300017701\|Ga0181364_1013894	Not Available	1344	Open in IMG/M
3300017701\|Ga0181364_1040830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	740	Open in IMG/M
3300017707\|Ga0181363_1038917	Not Available	877	Open in IMG/M
3300017707\|Ga0181363_1054659	Not Available	710	Open in IMG/M
3300017707\|Ga0181363_1059742	Not Available	671	Open in IMG/M
3300017707\|Ga0181363_1089151	Not Available	524	Open in IMG/M
3300017716\|Ga0181350_1022944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	1741	Open in IMG/M
3300017736\|Ga0181365_1055590	Not Available	985	Open in IMG/M
3300017736\|Ga0181365_1080417	Not Available	799	Open in IMG/M
3300017747\|Ga0181352_1095228	Not Available	821	Open in IMG/M
3300017747\|Ga0181352_1145405	Not Available	630	Open in IMG/M
3300017754\|Ga0181344_1039233	Not Available	1430	Open in IMG/M
3300017766\|Ga0181343_1059327	Not Available	1115	Open in IMG/M
3300017766\|Ga0181343_1083099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	917	Open in IMG/M
3300017774\|Ga0181358_1044516	Not Available	1695	Open in IMG/M
3300017777\|Ga0181357_1223895	Not Available	662	Open in IMG/M
3300017784\|Ga0181348_1056941	Not Available	1589	Open in IMG/M
3300019784\|Ga0181359_1000541	Not Available	8621	Open in IMG/M
3300019784\|Ga0181359_1007029	Not Available	3800	Open in IMG/M
3300019784\|Ga0181359_1042964	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa16	1751	Open in IMG/M
3300019784\|Ga0181359_1095008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1100	Open in IMG/M
3300020159\|Ga0211734_10165022	Not Available	6618	Open in IMG/M
3300020527\|Ga0208232_1003850	Not Available	2559	Open in IMG/M
3300020549\|Ga0207942_1004254	Not Available	2146	Open in IMG/M
3300020550\|Ga0208600_1007907	Not Available	1718	Open in IMG/M
3300020550\|Ga0208600_1017221	Not Available	1160	Open in IMG/M
3300020563\|Ga0208082_1002870	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	4683	Open in IMG/M
3300020571\|Ga0208723_1028787	Not Available	827	Open in IMG/M
3300021961\|Ga0222714_10007034	Not Available	10387	Open in IMG/M
3300021961\|Ga0222714_10059620	Not Available	2590	Open in IMG/M
3300021961\|Ga0222714_10307330	Not Available	867	Open in IMG/M
3300022179\|Ga0181353_1010583	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa16	2316	Open in IMG/M
3300024346\|Ga0244775_10055758	Not Available	3427	Open in IMG/M
3300024346\|Ga0244775_10827267	Not Available	739	Open in IMG/M
3300027631\|Ga0208133_1007640	Not Available	3070	Open in IMG/M
3300027710\|Ga0209599_10003710	Not Available	5778	Open in IMG/M
3300027734\|Ga0209087_1017874	Not Available	3518	Open in IMG/M
3300027785\|Ga0209246_10070710	Not Available	1355	Open in IMG/M
3300027798\|Ga0209353_10339042	Not Available	630	Open in IMG/M
3300028025\|Ga0247723_1049148	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	1215	Open in IMG/M
3300028025\|Ga0247723_1080503	Not Available	858	Open in IMG/M
3300028025\|Ga0247723_1114586	Not Available	665	Open in IMG/M
3300028027\|Ga0247722_10005241	All Organisms → cellular organisms → Bacteria	6084	Open in IMG/M
3300028027\|Ga0247722_10018416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2901	Open in IMG/M
3300028027\|Ga0247722_10020649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2714	Open in IMG/M
3300031784\|Ga0315899_10307382	Not Available	1567	Open in IMG/M
3300031784\|Ga0315899_10665313	Not Available	973	Open in IMG/M
3300031786\|Ga0315908_10021461	Not Available	4748	Open in IMG/M
3300031786\|Ga0315908_10113659	Not Available	2185	Open in IMG/M
3300031857\|Ga0315909_10075187	Not Available	3006	Open in IMG/M
3300031857\|Ga0315909_10415865	Not Available	958	Open in IMG/M
3300031857\|Ga0315909_10731842	Not Available	637	Open in IMG/M
3300031857\|Ga0315909_10804100	Not Available	594	Open in IMG/M
3300031951\|Ga0315904_10287998	Not Available	1548	Open in IMG/M
3300031951\|Ga0315904_10687557	Not Available	863	Open in IMG/M
3300031952\|Ga0315294_11021258	Not Available	688	Open in IMG/M
3300031963\|Ga0315901_10368910	Not Available	1162	Open in IMG/M
3300031999\|Ga0315274_10508895	Not Available	1359	Open in IMG/M
3300032053\|Ga0315284_10453970	Not Available	1567	Open in IMG/M
3300032092\|Ga0315905_10045819	Not Available	4438	Open in IMG/M
3300032116\|Ga0315903_10983280	Not Available	593	Open in IMG/M
3300032116\|Ga0315903_11105098	Not Available	544	Open in IMG/M
3300033993\|Ga0334994_0025772	Not Available	3856	Open in IMG/M
3300033993\|Ga0334994_0062814	Not Available	2276	Open in IMG/M
3300033996\|Ga0334979_0008039	All Organisms → cellular organisms → Bacteria	7336	Open in IMG/M
3300033996\|Ga0334979_0121465	Not Available	1606	Open in IMG/M
3300034061\|Ga0334987_0004893	Not Available	12801	Open in IMG/M
3300034061\|Ga0334987_0128120	Not Available	1899	Open in IMG/M
3300034062\|Ga0334995_0042706	Not Available	3774	Open in IMG/M
3300034062\|Ga0334995_0161628	Not Available	1603	Open in IMG/M
3300034062\|Ga0334995_0682707	Not Available	581	Open in IMG/M
3300034082\|Ga0335020_0459285	Not Available	608	Open in IMG/M
3300034092\|Ga0335010_0385367	Not Available	772	Open in IMG/M
3300034093\|Ga0335012_0008413	Not Available	6198	Open in IMG/M
3300034095\|Ga0335022_0578358	Not Available	571	Open in IMG/M
3300034101\|Ga0335027_0206311	Not Available	1391	Open in IMG/M
3300034102\|Ga0335029_0040804	Not Available	3450	Open in IMG/M
3300034104\|Ga0335031_0031268	Not Available	3881	Open in IMG/M
3300034104\|Ga0335031_0034130	Not Available	3702	Open in IMG/M
3300034104\|Ga0335031_0249832	Not Available	1176	Open in IMG/M
3300034104\|Ga0335031_0662835	Not Available	605	Open in IMG/M
3300034104\|Ga0335031_0781807	Not Available	537	Open in IMG/M
3300034105\|Ga0335035_0342397	Not Available	867	Open in IMG/M
3300034119\|Ga0335054_0615319	Not Available	593	Open in IMG/M
3300034121\|Ga0335058_0178335	Not Available	1243	Open in IMG/M
3300034283\|Ga0335007_0449827	Not Available	789	Open in IMG/M
3300034283\|Ga0335007_0453000	Not Available	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.18%
Terrestrial	Environmental → Terrestrial	6.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	87.12%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.82%
Marine	Environmental → Aquatic → Marine	6.06%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	41.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.03%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.61%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.30%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Ice	Environmental → Aquatic → Freshwater → Ice	1.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.39%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.97%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.61%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.82%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.52%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.76%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	21.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	21.97%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.06%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.06%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	4.55%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	3.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.03%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.27%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.27%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.76%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002363	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300011339	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020571	Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29624_1032591	3300002363	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKVD*
B570J40625_1002570973	3300002835	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINNQPGDWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKAD*
JGI25921J50272_100693082	3300003430	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVQYINDQPGDWVKFKIFEKVDDPKGFTHNMEVIQQKEKCNNVAKD*
Ga0065166_102519861	3300004112	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVQYINDQPGEWVKFKIFEKVDDPKGFTHNMEVIQQKDKPTKLVD*
Ga0078894_100723555	3300005662	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVQYINDQPGDWIKFKIFEKQDDPKGFTHNMEVIQQKERDQDKPTKLVD*
Ga0078894_105172342	3300005662	Freshwater Lake	MYMKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIFEKQDDPKGFTHNMEVIQQKEKCNNVAKD*
Ga0078894_112942952	3300005662	Freshwater Lake	MKRKGFYIKKADNGLYLNIFKADFVQYINDQPGDWIKFKIFEKQDDPKGFTHNMEIIQQKDKPTKLVD*
Ga0070744_100090512	3300006484	Estuarine	MYMKRKGFYIKKSDKGIYLNIFKADFVQYINEQDGEWIKFNIYEKDNCPKGFTHNMELIQQRIKDKEQDEPR*
Ga0102828_10358601	3300007559	Estuarine	MKRKGFYIKKSDKGIYLNIFKADFVQYINEQDGEWIKFNIYEKDNCPKGFTHNMELIQQRIKEDSSNNNTDTTIL*
Ga0114340_10032324	3300008107	Freshwater, Plankton	MKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDAKGFSHDMKLIKQIEKPTNIVERKVRQTN*
Ga0114343_11403542	3300008110	Freshwater, Plankton	MKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDAKGFSHDMKLIKQIEKPTNIVE*
Ga0114346_11394983	3300008113	Freshwater, Plankton	NKYQYFMKFLFIFDYMKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWIKFKIFEKLNDPKGFTHNMELIQQKDKPTNIVD*
Ga0114346_12141642	3300008113	Freshwater, Plankton	MKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWIKFKIFEKLNDPKGFTHNMEIIQQKDKCNNDAN*
Ga0114354_10370518	3300008119	Freshwater, Plankton	MKRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQKEYLYSR*
Ga0114840_10341062	3300008258	Freshwater, Plankton	MKRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQKEKCNDVAKD*
Ga0114363_10089841	3300008266	Freshwater, Plankton	VNKYQYFMKFLFIFGYMKRKGFYIKKAENGLYLNIFKADFIEYINDQPGKWVKFKIFEKLNDPKGFTHNMEIIQQKEKCNNDAN*
Ga0114364_10882972	3300008267	Freshwater, Plankton	MKRKGFYIKKSEKGIYLNIFKSDFIQYINDSPGEWIKFLIHEKQEDAKGFRHDMKLIKQIDKQEKLD*
Ga0114876_10338665	3300008448	Freshwater Lake	MKRKGFYIKKSEKGIYLNIFKADFVQYINEQDGDWIKFLIHEKQEDAKGFSHDMKLIRQIDKPTNSVE*
Ga0114876_10376122	3300008448	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKKDDPKGFTHNMDIIKQIEREDKVD*
Ga0114876_10763752	3300008448	Freshwater Lake	MKRKGFYIKKSEKGIYLNIFKADFVQYINEQDGDWIKFLIHEKEQDSKGFCFDMKLIRQIEKPTNIVE*
Ga0114876_11146762	3300008448	Freshwater Lake	MKRKGFYIKKSEKGIYLNIFKADFVQYINEQDGDWVKFLIHEKQEDSKGFCHDMKLIKQIEKPTNIVE*
Ga0114876_11573252	3300008448	Freshwater Lake	MKRKGFYIKKADNGLYLNIFKSDFVQYINDQPGDWVKFKIFEKQDDPKGFTHNMEIIQQKEKCNNVAKD*
Ga0114876_12112311	3300008448	Freshwater Lake	MKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDAKGFSHDMKLIRQIEKPTNSVD*
Ga0114880_10803181	3300008450	Freshwater Lake	MKRKGFYIKKAESGLYLNIFKADFIEYINDQPGQWIKFKIFEKLNDPKGFTHNMEIIQQKESIKDIKD*
Ga0114880_10820821	3300008450	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFIEYINGQPGEWIKFKIFEKVNDPKGFSHNMEIIQQKERDQDKPTKLVD*
Ga0114880_11261742	3300008450	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKPDFIQYINEQGGEWVKFKIFEKLNDTKGFTHNMEIIQQKDKCNNDAN*
Ga0105103_101397013	3300009085	Freshwater Sediment	MKRKGFYIKKAENGLYLNIFKDDFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKPTNIVE*
Ga0114978_104044161	3300009159	Freshwater Lake	IKYQYFVKILFIFDYMKRKGFYIKKAENGLYLNIFKADFVEYINEQPGDWVKFKIFEKGNDPKGFTHNMEIIQQKDKPTKLVD*
Ga0115028_107998802	3300009179	Wetland	MKRKGFYIKKAENGLYLNIFKSDFIEYINSQSGEWVKFKIFEKINDPKGFTHNMEIIQQKEKQEDSSK*
Ga0114974_100998463	3300009183	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVEYINNSPGEWVKFKIYEKLNDPKGYTHNMEIIQQKDKPTKLVD*
Ga0114982_10059563	3300009419	Deep Subsurface	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKVNDPKGFSHNMEIIQQKEKPTNIVD*
Ga0114982_10117033	3300009419	Deep Subsurface	MKRKGFYIKKAENGIYLNIFKEDFVVYINEQPGEWIKFKIYEKVNDPKGFTHNMEIIQQKEKQEESSK*
Ga0133913_110662453	3300010885	Freshwater Lake	MKRKGFYIKKSHNGLYLNIFKPDFIQYIKDSPDEWVKFKIYEKLNDPKGFTHNMEIIQQKEKTTNIVD*
Ga0139557_10778081	3300011010	Freshwater	MKRKGFYIKKSDNGLYLNIFKADFIEYINGQPGDWIKFKIYEKAEDVKGFTHNMEIIQ
Ga0153697_109122	3300011334	Freshwater	MYMKRKGFYIKKAENGLYLNIFKADFVEYINDQPGEWVKFKIYEKKDDPKGFTHNMDIIKQIVKEDKID*
Ga0153700_1086913	3300011339	Freshwater	MKRKGFYIKKSDKGLYLNIFKPDFVQYINDQHGDWVKFSIYEKLNDPKGFTHNMELIAQRVKEESKTNQDR*
Ga0153805_10902261	3300012013	Surface Ice	MKRKGFYIKKAENGLYLNIFKANFIEYIGSQPGDWIKFKIFEKIEDSKGFTHNMEIIQQKERDQDKPTK*
Ga0157203_10002456	3300012663	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFVQYINDSPGEWVKFKIYEKLNDPKGFTHNMEIIQQKDKPTNIVD*
Ga0157203_10216352	3300012663	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEFINDQPGEWIKFKIYEKQDDPKGFTHNMEIIQQKDKCNDDAN*
Ga0157210_10260861	3300012665	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFIEYINDQAGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKCNNDAN*
Ga0164293_100348683	3300013004	Freshwater	MKRKGFYIKKAESGLYLNIFKADFVQYINEQPGDWIKFKIFEKVEDVKGFTHNMEIIQQKENATKLQNDSDK*
Ga0164293_102909934	3300013004	Freshwater	VFIFDYMKRKGFYIKKAENGLYLNIFKADFVQYINEQPGDWIKFKIYEKQDDPKGFTHNMEIIQQKEKCNDVAK*
Ga0164292_100933352	3300013005	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKQDDPKGFTHNMEIIQQKEKPTNIVD*
Ga0177922_103328042	3300013372	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWVKFKIFEKIDDPKGFTHNMEIIQQKENATMLQNDSDK*
Ga0181364_10138942	3300017701	Freshwater Lake	MKRKGFYIKKSENGLYLNIFKPDFVQYINEHQGDWIKFKIFEKLDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181364_10408301	3300017701	Freshwater Lake	LPIWEEVYLNIFKPDFVQYINEQHGDWIKFKIFEKAEDVKGFTHNMEIIQQKERDQDKPTKLVD
Ga0181363_10389171	3300017707	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKPTNIVE
Ga0181363_10546592	3300017707	Freshwater Lake	DFMKFLFIFDYMKRKGFYIKKAENGLYLNIFKPDFIQYINDSPGEWVKFKIYEKLNDPKGFTHNMEIIQQKESIKDIKD
Ga0181363_10597422	3300017707	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKPDFIQYINEQGGEWVKFKIFEKIEDSKGFTHNMEIIQQKENATMLQNDSNK
Ga0181363_10891511	3300017707	Freshwater Lake	FYIKKSDNGLYLNIFKPDFIQYINDQPCEWIKFKIYEKQDDPKGFTHNMEIIQQKDKRDKLD
Ga0181350_10229442	3300017716	Freshwater Lake	MKRKGFYIKKAESGLYLNIFKADFVQYINEHQGDWIKFKIFEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181365_10555901	3300017736	Freshwater Lake	MKRKGFYIKKSDNGLYLNIFKADFIEYINGQPGEWLKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181365_10804171	3300017736	Freshwater Lake	MYMKRKGFYIKKAESGLYLNIFKADFVQYINEHQGDWIKFKIFEKLDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181352_10952282	3300017747	Freshwater Lake	YIKKAENGLYLNIFKADFIEYINDQPGDWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKL
Ga0181352_11454052	3300017747	Freshwater Lake	IFVYMKRKGFYIKKSENGLYLNIFKPDFIQYINDQPCEWIKFKIYEKQDDPKGFTHNMEIIQQKDKRDKLD
Ga0181344_10392332	3300017754	Freshwater Lake	MYMKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIFEKQDDPKGFTHNMEVIQQKEKCNNVAKD
Ga0181343_10593271	3300017766	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVQYINDQPGDWIKFKIFEKVDDPKGFTHNMEVIQQKEKCNNVAKD
Ga0181343_10830991	3300017766	Freshwater Lake	ILFIFTYMKRKGFYIKKAENGLYLNIFKADFVQYINDQPGEWVKFKIFEKVDDPKGFTHNMEVIQQKDKPTKLVD
Ga0181358_10445162	3300017774	Freshwater Lake	MKRKGFYIKKSDNGLYLNIFKSDFIQYINEQDGEWVKFKIFEKLNDPKGFTHNMEIIQQKERDQDKPTKLVD
Ga0181357_12238953	3300017777	Freshwater Lake	MKRKGFYIKKSDNGLYLNIFKADFIEYINGQPGEWLKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKDXITIK
Ga0181348_10569414	3300017784	Freshwater Lake	MKKKGFYIKKAENGLYLNIFKADFIEYINGQPGEWLKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181359_100054111	3300019784	Freshwater Lake	MYMKRKGFYIKKAENGLYLNIFKADFIEYINGQPGEWLKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181359_10070298	3300019784	Freshwater Lake	MKRKGFYIKKAESGLYLNIFKADFVQYINEHQGDWIKFKIFEKLDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181359_10429642	3300019784	Freshwater Lake	MKRKGFYIKKSDNGLYLNIFKADFIEYINGQPGEWVKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0181359_10950082	3300019784	Freshwater Lake	MKRKGFYIKKSENGLYLNIFKPDFVQYINEQHGDWIKFKIFEKAEDVKGFTHNMEIIQQKERDQDKPTKLVD
Ga0211734_101650228	3300020159	Freshwater	MILNFMYMKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDSKGFSHDMKLIRQIDKKEGE
Ga0208232_10038503	3300020527	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKVD
Ga0207942_10042542	3300020549	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINNQPGDWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKVD
Ga0208600_10079072	3300020550	Freshwater	VFIFDYMKRKGFYIKKAENGLYLNIFKHDFIQYINDSPGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKPTNIVD
Ga0208600_10172212	3300020550	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINNQPGDWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKAD
Ga0208082_10028702	3300020563	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGDWIKFKIFEKVNDPKGFSHNMEIIQQKEKPTNIVD
Ga0208723_10287872	3300020571	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKAD
Ga0222714_100070344	3300021961	Estuarine Water	MKRKGFYIKKNPKGLYLNIFKPDFIQYINDQTGEWVKFSIYEKINDPKGFTHNMELIQQKDKEQDNHTKLID
Ga0222714_100596204	3300021961	Estuarine Water	MYMKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEIIQQKEQKGKDIAKEAI
Ga0222714_103073302	3300021961	Estuarine Water	MKRKGFYIKKAENGLYLNIFKADFVQYINDQPGDWIKFKIFEKVDDPKGFTHNMEIIQQKEKCNNVAKD
Ga0181353_10105832	3300022179	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKPDFIQYINDQPCEWIKFKIFEKIEDVKGFTHNMEIIQQKEKCNNDAN
Ga0244775_100557582	3300024346	Estuarine	MYMKRKGFYIKKSDKGIYLNIFKADFVQYINEQDGEWIKFNIYEKDNCPKGFTHNMELIQQRIKDKEQDEPR
Ga0244775_108272672	3300024346	Estuarine	MKRKGFYIKKAENGLYLNIFKPDFVQYINEQGGDWIKFKIFEKQDDPKGFTHNMEIIQQKEKQDQKDSSK
Ga0208133_10076407	3300027631	Estuarine	MYMKRKGFYIKKSDKGIYLNIFKADFVQYINEQDGEWIKFNIYEKDNCPKGFTHNMELIQQRIKEDSSNNNTDTTIL
Ga0209599_100037109	3300027710	Deep Subsurface	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKVNDPKGFSHNMEIIQQKEKPTNIVD
Ga0209087_10178743	3300027734	Freshwater Lake	MKRKGFYIKKAENGLYLNIFKADFVEYINNSPGEWVKFKIYEKLNDPKGYTHNMEIIQQKDKPTKLVD
Ga0209246_100707101	3300027785	Freshwater Lake	FYIKKAESGLYLNIFKADFVQYINEHQGDWIKFKIFEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0209353_103390422	3300027798	Freshwater Lake	MKKKGFYIKKAENGLYLNIFKADFIEYINGQPGEWVKFKIFEKINDPKGYTHNMEIIQQKDKCNNVAKD
Ga0247723_10491483	3300028025	Deep Subsurface Sediment	GFYIKKAENGLYLNIFKADFIEYINDQHGEWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKLD
Ga0247723_10805032	3300028025	Deep Subsurface Sediment	NFTYMKRKGFYIKKAENGIYLNIFKEDFVVYINEQPGEWIKFKIYEKVNDPKGFTHNMEIIQQKEKQEESSK
Ga0247723_11145861	3300028025	Deep Subsurface Sediment	ILFIFDYMKRKGFYIKKAENGLYLNIFKPDFIQYINEQGGEWVKFKIFEKLNDPKGFTHNMEIIQQKEKQDQKDSST
Ga0247722_100052418	3300028027	Deep Subsurface Sediment	MYMKRKGFYIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKENKCNDVAK
Ga0247722_100184166	3300028027	Deep Subsurface Sediment	MKRKGFYIKKAENGLYLNIFKADFVEYINDAPGEWVKFKIYEKINDPKGFTHNMEIIQQKEKQEDSSK
Ga0247722_100206495	3300028027	Deep Subsurface Sediment	MKRKGFYIKKSENGIYLNIFKSDFIEYISGQPSEWVKFKIYEKVNDPKGFTHNMEIIQQKERNQDKPTKLLD
Ga0315899_103073823	3300031784	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFVQYINEHDGEWIKFKIFEKLNDPKGFTHNMEIIQQKDKCNNDAK
Ga0315899_106653131	3300031784	Freshwater	FIFTYMKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDAKGFSHDMKLIKQIEKPTNIVE
Ga0315908_100214613	3300031786	Freshwater	MKRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQKDKPTNIVD
Ga0315908_101136591	3300031786	Freshwater	MKRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQK
Ga0315909_100751876	3300031857	Freshwater	MKRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQKEKCNDVAKD
Ga0315909_104158651	3300031857	Freshwater	MKRKGFYIKKAENGLYLNIFKPDFIQYINEQGGEWIKFKIFEKLEDSKGFTHNMEIIQQKDKCNDDAN
Ga0315909_107318422	3300031857	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWIKFKIFEKLNDPKGFTHNMEIIQQKDKCNNDAN
Ga0315909_108041002	3300031857	Freshwater	MKFLFIFDYMKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWVKFKIFEKIDDPKGFTHNMEIIQQKEN
Ga0315904_102879982	3300031951	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWVKFKIFEKIDDPKGFTHNMEIIQQKENATMLQNDSDK
Ga0315904_106875572	3300031951	Freshwater	MKRKGFYIKKAENGLYLNIFKPDFIQYINDQPCEWIKFKIFEKQDDPKGFTHNMEIIQQKDKCNNDAN
Ga0315294_110212582	3300031952	Sediment	MKRKGFYIKKSENSLYLNIFKADFIEYINGQPGEWVKFKIYEKHDDPKGFTHNMEIIQQKEKCNNDAKD
Ga0315901_103689101	3300031963	Freshwater	MKRKGFYIKKSEKGIYLNIFKADFIEYINDQPGDWVKFLIHEKQEDAKGFSHDMKLIKQIEKPTNIVE
Ga0315274_105088952	3300031999	Sediment	MKRKGFYIKKSENGLYLNIFKADFIEYINGQPGEWVKFKIYEKHDDPKGFTHNMEIIQQKDKCDNDAK
Ga0315284_104539703	3300032053	Sediment	MKRKGFYIKKAENGLYLNIFKADFIQYINDSPGEWVKFKIYEKHDDPKGFTHNMEIIQQKDKCNNVAKD
Ga0315905_100458193	3300032092	Freshwater	MKFLFIFDYMKRKGFYIKKAENGLYLNIFKPDFIQYINEQGGEWVKFKIFEKLNDTKGFTHNMEIIQQKDKCNNDAN
Ga0315903_109832802	3300032116	Freshwater	MKRKGFYIKKAESGLYLNIFKADFIEYINDQPGQWIKFKIFEKLNDPKGFTHNMEIIQQKESIKDIKD
Ga0315903_111050982	3300032116	Freshwater	KRKGFYIKKSDNGLYLNIYKPDFIQYINDQDGEWVKFKIFEKLNDPKGFTHNMELIQQKDKPTNIVD
Ga0334994_0025772_410_616	3300033993	Freshwater	MKRKGFYIKKAENGLYLNIFKADFVQYINEQPGDWIKFKIYEKQDDPKGFTHNMEIIQQKEKCNDVAK
Ga0334994_0062814_1840_2058	3300033993	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKQDDPKGFTHNMEIIQQKENATKLQNDSDK
Ga0334994_0141233_2_169	3300033993	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINNQPGDWVKFKIYEKADDPKGFTHNMEV
Ga0334979_0008039_3116_3334	3300033996	Freshwater	MKRKGFYIKKAESGLYLNIFKADFVQYINEQPGDWIKFKIFEKVEDVKGFTHNMEIIQQKENATKLQNDSDK
Ga0334979_0121465_577_783	3300033996	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKQDDPKGFTHNMEIIQQKEKPTNIVD
Ga0334987_0004893_10649_10855	3300034061	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGDWIKFKIFEKVDDPKGFTHNMEIIQQKDKPTKLVD
Ga0334987_0128120_669_875	3300034061	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFVQYINDSPGEWVKFKIYEKQDDPKGFTHNMEIIQQKEKPTNIVD
Ga0334995_0042706_1847_2053	3300034062	Freshwater	MKRKGFYIKKAENGLYLNIFKHDFIQYINDSPGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKPTNIVD
Ga0334995_0161628_693_902	3300034062	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGEWVKFKIFEKLNDPKGFTHNMEIIQQKDKCNDVAKD
Ga0334995_0682707_21_227	3300034062	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKPTDIVD
Ga0335020_0459285_87_290	3300034082	Freshwater	MKRKGFYIKKAENGLYLNIFKDDFIEYINDQPGEWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKVD
Ga0335010_0385367_524_727	3300034092	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGDWVKFKIYEKADDPKGFTHNMEVIQQKEKLDKVD
Ga0335012_0008413_5529_5738	3300034093	Freshwater	MKRKGFYIKKSDNGLYLNIFKPDFIQYINEQGGEWIKFKIYEKQDDPKGFTHNMEIIQQKDKCNDVAKD
Ga0335022_0578358_2_190	3300034095	Freshwater	FYIKKAENGLYLNIFKADFIEYINDQPGDWIKFKIFEKVDDPKGFTHNMEIIQQKDKRDKLD
Ga0335027_0206311_447_656	3300034101	Freshwater	MKRKGFYIKKAESGLYLNIFKPDFIEYINDQPGDWIKFKIFEKVNDPKGFSHNMEIIQQKEKCNDVAKG
Ga0335029_0040804_2197_2403	3300034102	Freshwater	MKRKGFYIKKAENGLYLNIFKPDFVQYINEQPGDWIKFKIYEKQDDPKGFTHNMEVIQQKEKPTNIVD
Ga0335031_0031268_1708_1914	3300034104	Freshwater	MKRKGFYIKKAENGLYLNIFKADFVEYINGQHGDWIKFKIFEKVDDPKGFTHNMEVIQQKEKPTNIVD
Ga0335031_0034130_842_1048	3300034104	Freshwater	MKRKGFYIKKAENGLYLNIFKPDFIEYINDQSGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKPTDIVD
Ga0335031_0249832_865_1071	3300034104	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINEQPGDWIKFKIFEKQDDPKGFTHNMEIIQQKEKPTNIVD
Ga0335031_0662835_226_459	3300034104	Freshwater	MKNVFIFDYMKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKLNDPKGFTHNMEIIQQKEKPTNIVD
Ga0335031_0781807_1_189	3300034104	Freshwater	YIKKAENGLYLNIFKADFIEYINDQPGEWVKFKIYEKQDDPKGFTHNMEVIQQKEKPTNIVE
Ga0335035_0342397_556_759	3300034105	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQPGDWIKFKIFEKVDDPKGFTHNMEIIQQKDKRDKLD
Ga0335054_0615319_309_527	3300034119	Freshwater	MKRKGFYIKKAENGLYLNIFKADFVEYINGQPGDWIKFKIFEKVNDPKGFSHNMEIIQQKENATKLQNDSDK
Ga0335058_0178335_289_507	3300034121	Freshwater	MKRKGFYIKKAENGMYLNIFKADFVQYINEQPGDWIKFKIYEKQDDPKGFTHNMEIIQQKENATKLQNDSDK
Ga0335007_0449827_1_219	3300034283	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINDQSGDWIKFKIFEKVDDPKGFTHNMEIIQQKENATKLQNDTDK
Ga0335007_0453000_1_204	3300034283	Freshwater	MKRKGFYIKKAENGLYLNIFKADFIEYINNQPGEWVKFKIFEKLDDPKGFTHNMEIIQQKEKPTNIVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences