Metagenome / Metatranscriptome Family F060888

Basic Information
Family ID	F060888
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	73 residues
Representative Sequence	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.23 %
% of genes near scaffold ends (potentially truncated)	44.70 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (56.061 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.576 % of family members)
Environment Ontology (ENVO)	Unclassified (42.424 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (35.606 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.30% β-sheet: 7.77% Coil/Unstructured: 68.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00589	Phage_integrase	25.00
PF00216	Bac_DNA_binding	3.03
PF01546	Peptidase_M20	2.27
PF03401	TctC	0.76
PF13340	DUF4096	0.76
PF04392	ABC_sub_bind	0.76
PF13641	Glyco_tranf_2_3	0.76
PF14907	NTP_transf_5	0.76
PF02586	SRAP	0.76
PF01068	DNA_ligase_A_M	0.76
PF02945	Endonuclease_7	0.76
PF00176	SNF2-rel_dom	0.76
PF05362	Lon_C	0.76
PF03358	FMN_red	0.76
PF09913	DUF2142	0.76
PF08808	RES	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.03
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.76
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.76
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.76
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
All Organisms	root	All Organisms	43.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
cellular organisms	root	All Organisms → cellular organisms	43.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.52 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.52 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	1.52 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
Gluconacetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter	0.76 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.52 %
Sphingomonas laterariae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas laterariae	1.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.76 %
Gluconacetobacter dulcium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter dulcium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.06 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.52 %
Sphingomonas laterariae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas laterariae	1.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
Rhizobium smilacinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium smilacinae	0.76 %
Gluconacetobacter dulcium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter dulcium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02IYCBV	Not Available	529	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101381258	Not Available	556	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101382811	Not Available	796	Open in IMG/M
3300000955\|JGI1027J12803_108300639	Not Available	902	Open in IMG/M
3300002239\|JGI24034J26672_10003715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas laterariae	2134	Open in IMG/M
3300004157\|Ga0062590_101815783	Not Available	625	Open in IMG/M
3300005093\|Ga0062594_100071529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1912	Open in IMG/M
3300005329\|Ga0070683_100081446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3031	Open in IMG/M
3300005332\|Ga0066388_100255303	Not Available	2393	Open in IMG/M
3300005332\|Ga0066388_100345842	Not Available	2133	Open in IMG/M
3300005332\|Ga0066388_101051360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1371	Open in IMG/M
3300005332\|Ga0066388_102549128	Not Available	930	Open in IMG/M
3300005332\|Ga0066388_106338192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium smilacinae	597	Open in IMG/M
3300005334\|Ga0068869_100017417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4868	Open in IMG/M
3300005335\|Ga0070666_10542833	Not Available	845	Open in IMG/M
3300005338\|Ga0068868_100008540	All Organisms → cellular organisms → Bacteria → Proteobacteria	7334	Open in IMG/M
3300005356\|Ga0070674_100317995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300005363\|Ga0008090_15863428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300005366\|Ga0070659_100236841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas laterariae	1509	Open in IMG/M
3300005445\|Ga0070708_100953116	Not Available	805	Open in IMG/M
3300005564\|Ga0070664_101898977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300005578\|Ga0068854_100878442	Not Available	787	Open in IMG/M
3300005615\|Ga0070702_100001667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9220	Open in IMG/M
3300005719\|Ga0068861_100016765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5190	Open in IMG/M
3300005764\|Ga0066903_101054296	Not Available	1493	Open in IMG/M
3300005764\|Ga0066903_101252995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1381	Open in IMG/M
3300005764\|Ga0066903_102427586	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005764\|Ga0066903_102543952	Not Available	992	Open in IMG/M
3300005764\|Ga0066903_103387503	Not Available	860	Open in IMG/M
3300005764\|Ga0066903_104958987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	706	Open in IMG/M
3300005840\|Ga0068870_10467905	Not Available	834	Open in IMG/M
3300005843\|Ga0068860_101468909	Not Available	703	Open in IMG/M
3300006038\|Ga0075365_10017070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4431	Open in IMG/M
3300006573\|Ga0074055_11691000	Not Available	552	Open in IMG/M
3300006606\|Ga0074062_12958471	Not Available	1093	Open in IMG/M
3300006844\|Ga0075428_100766727	Not Available	1026	Open in IMG/M
3300006847\|Ga0075431_101218269	Not Available	715	Open in IMG/M
3300009094\|Ga0111539_11990131	Not Available	674	Open in IMG/M
3300009176\|Ga0105242_10856126	Not Available	905	Open in IMG/M
3300009553\|Ga0105249_10218384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1875	Open in IMG/M
3300009792\|Ga0126374_10121211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300009792\|Ga0126374_11592256	Not Available	539	Open in IMG/M
3300010046\|Ga0126384_11177916	Not Available	706	Open in IMG/M
3300010048\|Ga0126373_12621265	Not Available	562	Open in IMG/M
3300010373\|Ga0134128_10265507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1925	Open in IMG/M
3300010375\|Ga0105239_10982936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	970	Open in IMG/M
3300010403\|Ga0134123_10106446	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300010403\|Ga0134123_11348125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	751	Open in IMG/M
3300012204\|Ga0137374_11077882	Not Available	574	Open in IMG/M
3300012469\|Ga0150984_121671252	Not Available	564	Open in IMG/M
3300012948\|Ga0126375_10833460	Not Available	734	Open in IMG/M
3300012951\|Ga0164300_10643764	Not Available	633	Open in IMG/M
3300013306\|Ga0163162_10513921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1328	Open in IMG/M
3300014325\|Ga0163163_10003985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12604	Open in IMG/M
3300015371\|Ga0132258_10904801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2228	Open in IMG/M
3300015371\|Ga0132258_13524329	Not Available	1072	Open in IMG/M
3300015373\|Ga0132257_102386632	Not Available	686	Open in IMG/M
3300015374\|Ga0132255_104406580	Not Available	597	Open in IMG/M
3300016319\|Ga0182033_10263858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter dulcium	1405	Open in IMG/M
3300016319\|Ga0182033_11112992	Not Available	705	Open in IMG/M
3300016387\|Ga0182040_10034154	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300016387\|Ga0182040_10647230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300018072\|Ga0184635_10269910	Not Available	671	Open in IMG/M
3300018073\|Ga0184624_10009382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3350	Open in IMG/M
3300018073\|Ga0184624_10271458	Not Available	761	Open in IMG/M
3300018083\|Ga0184628_10156703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300021560\|Ga0126371_10162533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2304	Open in IMG/M
3300025903\|Ga0207680_10378008	Not Available	998	Open in IMG/M
3300025908\|Ga0207643_11002877	Not Available	540	Open in IMG/M
3300025928\|Ga0207700_10431682	Not Available	1158	Open in IMG/M
3300025936\|Ga0207670_10148142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300027909\|Ga0209382_10280367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300028771\|Ga0307320_10188681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	804	Open in IMG/M
3300028803\|Ga0307281_10002797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4839	Open in IMG/M
3300028811\|Ga0307292_10138304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300031184\|Ga0307499_10193854	Not Available	621	Open in IMG/M
3300031543\|Ga0318516_10117733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1512	Open in IMG/M
3300031544\|Ga0318534_10211152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1120	Open in IMG/M
3300031546\|Ga0318538_10276612	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031572\|Ga0318515_10345290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300031573\|Ga0310915_10690868	Not Available	720	Open in IMG/M
3300031573\|Ga0310915_10936666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031679\|Ga0318561_10091549	Not Available	1587	Open in IMG/M
3300031680\|Ga0318574_10955836	Not Available	502	Open in IMG/M
3300031736\|Ga0318501_10106305	Not Available	1406	Open in IMG/M
3300031740\|Ga0307468_102135483	Not Available	540	Open in IMG/M
3300031748\|Ga0318492_10171867	Not Available	1100	Open in IMG/M
3300031764\|Ga0318535_10525616	Not Available	525	Open in IMG/M
3300031770\|Ga0318521_10117752	Not Available	1481	Open in IMG/M
3300031771\|Ga0318546_10169353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300031771\|Ga0318546_10552728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	809	Open in IMG/M
3300031777\|Ga0318543_10118625	Not Available	1147	Open in IMG/M
3300031778\|Ga0318498_10036164	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300031794\|Ga0318503_10033441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1516	Open in IMG/M
3300031796\|Ga0318576_10088858	Not Available	1398	Open in IMG/M
3300031799\|Ga0318565_10072324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300031805\|Ga0318497_10680996	Not Available	577	Open in IMG/M
3300031819\|Ga0318568_10079151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1943	Open in IMG/M
3300031832\|Ga0318499_10269927	Not Available	659	Open in IMG/M
3300031833\|Ga0310917_10063640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2295	Open in IMG/M
3300031879\|Ga0306919_10089321	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300031879\|Ga0306919_10143309	Not Available	1735	Open in IMG/M
3300031879\|Ga0306919_10788611	Not Available	730	Open in IMG/M
3300031880\|Ga0318544_10178109	Not Available	819	Open in IMG/M
3300031894\|Ga0318522_10043397	All Organisms → cellular organisms → Bacteria → Proteobacteria	1569	Open in IMG/M
3300031894\|Ga0318522_10377903	Not Available	536	Open in IMG/M
3300031896\|Ga0318551_10111927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1463	Open in IMG/M
3300031896\|Ga0318551_10749555	Not Available	567	Open in IMG/M
3300031910\|Ga0306923_10428222	Not Available	1503	Open in IMG/M
3300031910\|Ga0306923_10449704	Not Available	1461	Open in IMG/M
3300031941\|Ga0310912_10077658	All Organisms → cellular organisms → Bacteria → Proteobacteria	2405	Open in IMG/M
3300031942\|Ga0310916_11162318	Not Available	639	Open in IMG/M
3300031946\|Ga0310910_10172016	Not Available	1668	Open in IMG/M
3300031954\|Ga0306926_11794904	Not Available	696	Open in IMG/M
3300032001\|Ga0306922_10300335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300032035\|Ga0310911_10115428	Not Available	1486	Open in IMG/M
3300032052\|Ga0318506_10054005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300032052\|Ga0318506_10396388	Not Available	612	Open in IMG/M
3300032055\|Ga0318575_10702123	Not Available	512	Open in IMG/M
3300032059\|Ga0318533_10172600	Not Available	1538	Open in IMG/M
3300032060\|Ga0318505_10078795	Not Available	1463	Open in IMG/M
3300032064\|Ga0318510_10118772	Not Available	1022	Open in IMG/M
3300032065\|Ga0318513_10087331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300032075\|Ga0310890_11270830	Not Available	601	Open in IMG/M
3300032089\|Ga0318525_10181704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300032261\|Ga0306920_100354949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	2181	Open in IMG/M
3300032261\|Ga0306920_103256515	Not Available	606	Open in IMG/M
3300033289\|Ga0310914_10303243	Not Available	1440	Open in IMG/M
3300033289\|Ga0310914_10309772	Not Available	1424	Open in IMG/M
3300034147\|Ga0364925_0335534	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.03%
Host-Associated	Host-Associated	21.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	21.97%
Aquatic	Environmental → Aquatic	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.85%
Sediment	Environmental → Aquatic → Sediment	3.03%
Roots	Host-Associated → Plants → Roots	1.52%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.12%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00073540	2170459010	Grass Soil	CAQAQGSASCPTNAKPRGLARFREREVTRIAKAVRVAGGGKVTLDPETGRYTIVVGREGEGTPPDSNTANPWNEVYAADQERPS
INPhiseqgaiiFebDRAFT_1013812581	3300000364	Soil	RAGSREGVMFDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTENPWDAVYYAADKERPS*
INPhiseqgaiiFebDRAFT_1013828112	3300000364	Soil	MFKPRKPRGRARVRGRETARIIKAVRQAGGGEVTLNPETGLYKISVASEGGAPPDTTTANPWDAVYAANSKRPA*
JGI1027J12803_1083006393	3300000955	Soil	MFDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTENPWDAVYYAADKERPS*
JGI24034J26672_100037153	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVGRRRQXHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVNAADEERPS*
Ga0062590_1018157831	3300004157	Soil	MSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGT
Ga0062594_1000715294	3300005093	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS*
Ga0070683_1000814463	3300005329	Corn Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS*
Ga0066388_1002553031	3300005332	Tropical Forest Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS*
Ga0066388_1003458421	3300005332	Tropical Forest Soil	MGIRVMSRPRKPRGSTRFPKRELTRIAEAVRRAGGGKVTLDPATGHYTILVASQGGAPPDTTTANPWDAVYATDPKRPA*
Ga0066388_1010513601	3300005332	Tropical Forest Soil	MSDQRKPRGLARFRERELSRVTRAIRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWD
Ga0066388_1025491281	3300005332	Tropical Forest Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWD
Ga0066388_1063381921	3300005332	Tropical Forest Soil	MSDQRKPRGHARVRGREAVRILKAVREAGGGKVTLDPLTGHYTISVLGDGQVAPDITADNPWDDVHAADKERSS*
Ga0068869_1000174173	3300005334	Miscanthus Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS*
Ga0070666_105428332	3300005335	Switchgrass Rhizosphere	LGCDQRKPRGHARIRGRETVRIIKAVRQAGGGEVTLNPETGLYTISVPSEGRAPPDTTSANPWDVVYAADSKRPA*
Ga0068868_10000854012	3300005338	Miscanthus Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVNAADEERPS*
Ga0070674_1003179952	3300005356	Miscanthus Rhizosphere	MSDQRKPRGVARFRERELARITKALRGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAAD*
Ga0008090_158634281	3300005363	Tropical Rainforest Soil	VMSKPRKPRGLARFRERELSRVTRAVRDAGGGKITLNPETGHYTILVTSEGGAPPDTITANPWDAVYAADSKRPA*
Ga0070659_1002368411	3300005366	Corn Rhizosphere	RERVMSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS*
Ga0070708_1009531164	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVDGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWD
Ga0070664_1018989772	3300005564	Corn Rhizosphere	GLARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDSTTANPWDAVHAADSKRPA*
Ga0068854_1008784421	3300005578	Corn Rhizosphere	QRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS*
Ga0070702_1000016677	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWDKVNAADEERPS*
Ga0068861_1000167659	3300005719	Switchgrass Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKV
Ga0066903_1010542961	3300005764	Tropical Forest Soil	MSKPRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTTANPWDAVYAADSKRPA*
Ga0066903_1012529952	3300005764	Tropical Forest Soil	MSDQRKPRGHARIRGRETARIIKAVRQAGGGEVTLNPETGLYTISVAGEGGAPDDAATANPWDVVYAADSKRPA*
Ga0066903_1024275862	3300005764	Tropical Forest Soil	MSAKPRQRGGKRGLGRFRKVEVARVTRAVRLAGGGTVTLDPETGKYTIAIASQGASPDTTTNPWDAVHAADKDRAS*
Ga0066903_1025439522	3300005764	Tropical Forest Soil	MSKLRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTANPWDAVYAADKERPS*
Ga0066903_1033875033	3300005764	Tropical Forest Soil	MSKPRKPRGSTRFPKRELTRITEAVRRAGGGKVTLDPATGHYTILVASQGGAPPDTTTANPWDAVYATDPKRPA*
Ga0066903_1049589871	3300005764	Tropical Forest Soil	MSKQRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPESGRYTIVVASEGERMPPDSNTDNPWNEVYAADQKRPS*
Ga0068870_104679051	3300005840	Miscanthus Rhizosphere	LGCDQRKPRGHALIRGRETVRIIKAVRQAGGGEVTLNPETGLSTISVPSEGRAPPDTTSANPWDVVYAADSKR
Ga0068860_1014689092	3300005843	Switchgrass Rhizosphere	LGCDQRKPRGHARIRGRETVRIIKAVRQAGGGEVTLNPETGLSTISVPSEGRAPPDTTSANPWDVVYAADSKRPA*
Ga0075365_100170701	3300006038	Populus Endosphere	MSDQRKPRGLARIRGREVTRVTKAVRVAGGGKITLDPKTGQYTILVASEGGAPPDTTTENPWDAVYYA
Ga0074055_116910002	3300006573	Soil	MSDQRKPRGVARFRERELARITKALRGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAADQERPS*
Ga0074062_129584712	3300006606	Soil	MSDQRKPRGVARFRERELARITKALRGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNSDNPWNEVYAAD*
Ga0075428_1007667272	3300006844	Populus Rhizosphere	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVAREGGARPDTITENPWDVVYYAADKERPS*
Ga0075421_1017135312	3300006845	Populus Rhizosphere	MSAPRKPRTVARFREREVTRIAKAVRVAGGGKVTLDPATGCFTIMVASESAPPETNTDFDSWVAKRAHQA*
Ga0075431_1012182692	3300006847	Populus Rhizosphere	RRVAGKHVMSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVAREGGARPDTITENPWDVVYYAADKERPS*
Ga0111539_119901311	3300009094	Populus Rhizosphere	LGCDQRKPRGHARIRGRETVRIIKAVRQAGGGEVTLNPETGLYTISVPSEGRAPPDTTSANP
Ga0105242_108561262	3300009176	Miscanthus Rhizosphere	MTPARREWGSGMSDQRKPRGLARFREREVTRITKAVRVAGCGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS*
Ga0105249_102183844	3300009553	Switchgrass Rhizosphere	MTPARREWGSGMSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS*
Ga0126374_101212112	3300009792	Tropical Forest Soil	VETGVMSKPRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTANPWDAVYAADSKRPA*
Ga0126374_115922561	3300009792	Tropical Forest Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWDEVYAANQKRPS*
Ga0126384_111779161	3300010046	Tropical Forest Soil	MSKLRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS*
Ga0126373_126212652	3300010048	Tropical Forest Soil	VETGVMSKPRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTTANPWDAVYAADSKRPA*
Ga0134128_102655071	3300010373	Terrestrial Soil	MSDQRKPRGLARFREREVTRITKAVRVGRRRQGHAGPRTGRYTITVSKGEGTPPDSNAANPWDKVNAADEERPS
Ga0105239_109829363	3300010375	Corn Rhizosphere	QLRAGTRERVMPDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEVEGTPPWNEVYAANQERPS*
Ga0134123_101064461	3300010403	Terrestrial Soil	FRERELARITKALLGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAAD*
Ga0134123_113481251	3300010403	Terrestrial Soil	HRARRVRLGCDQRKPRGHALIRGRETVRIIKAVRQAGGGEVTLNPETGLSTISVPSEGRAPPDTTSANPWDVVYAADAKRPA*
Ga0137374_110778821	3300012204	Vadose Zone Soil	MSKPRKPRGSTRFPKREVTRITEAVRVAGGVTLDPETGHYTILVASEGGAPPDTTTANPWDAVYAADSKRPA*
Ga0150984_1216712522	3300012469	Avena Fatua Rhizosphere	DQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGEGTPPNSNTANPWNEVYAADPERPS*
Ga0126375_108334602	3300012948	Tropical Forest Soil	MSKARKPRSSTRFPKREVTRITEAVRLAGGGKVTLDPETGHYTILVASEGGAPPDTTANPWDAVYAADSKRPA*
Ga0164300_106437641	3300012951	Soil	RGLARFREREVTRIAKAVRVAGGGKVTLDPETGRYTIVVGREGEGTPPDSNTDNPWNEVLYAADQERPS*
Ga0163162_105139212	3300013306	Switchgrass Rhizosphere	SDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS*
Ga0163163_100039851	3300014325	Switchgrass Rhizosphere	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEVEGTPPWNEVYAANQERPS*
Ga0132258_109048012	3300015371	Arabidopsis Rhizosphere	MSDQRKPRGHARIRGRETARIIKAVRQAGGGEVTLNPETGLYTISVAREGGAPPDTTTANPWDGVYAADSKRPA*
Ga0132258_135243292	3300015371	Arabidopsis Rhizosphere	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS*
Ga0132257_1023866322	3300015373	Arabidopsis Rhizosphere	MLRAGSREGVMSDQRKPRGLARFREREITRITKAVRVGRRRQGHAGPRTGRYTFTVSKGEGTPPD
Ga0132255_1044065801	3300015374	Arabidopsis Rhizosphere	MLRAGSREGVMSDQRKPRGHARIRGRETARIIKAVRQAGGGEVTLNPETGLYTISVAREGGAPPDTTTANPWDGVYAADSKRPA*
Ga0182033_102638581	3300016319	Soil	PRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS
Ga0182033_111129921	3300016319	Soil	MSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVANEGGAPPDTTTAN
Ga0182040_100341545	3300016387	Soil	PRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0182040_106472302	3300016387	Soil	PRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0184635_102699102	3300018072	Groundwater Sediment	MSDQRKPRGLARFRERELARITKALRGAGGGKLTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAAD
Ga0184624_100093825	3300018073	Groundwater Sediment	MSDQRKPRGVARFRERELARITKALRGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAAD
Ga0184624_102714582	3300018073	Groundwater Sediment	MSKPRKPRGLARFRKREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS
Ga0184628_101567032	3300018083	Groundwater Sediment	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS
Ga0126371_101625332	3300021560	Tropical Forest Soil	MSKPRKPRGSTRFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTTANPWDAVYAADSKRPA
Ga0207680_103780082	3300025903	Switchgrass Rhizosphere	LGCDQRKPRGHARIRGRETVRIIKAVRQAGGGEVTLNPETGLYTISVPSEGRAPPDTTSANPWDVVYAADSKRPA
Ga0207643_110028772	3300025908	Miscanthus Rhizosphere	LGCDQRKPRGHALIRGRETVRIIKAVRQAGGGEVTLNPETGLSTISVPSEGRAPPDTTSANPWDVVYAADSKRPA
Ga0207700_104316821	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TPARRHRERVMSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS
Ga0207670_101481423	3300025936	Switchgrass Rhizosphere	MTPARRHRERVMSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS
Ga0209382_102803672	3300027909	Populus Rhizosphere	MSKPRKPRGLARFREREVTRITKAVRVAGGCKVTLDPETGHYTILVAREGGARPDTITENPWDVVYYAADKERPS
Ga0307320_101886812	3300028771	Soil	TLSREGVMSDQRKPRGLARFRKREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTENPWDAVYYAADKERPS
Ga0307281_100027972	3300028803	Soil	MSDQRKPRGLARFREREVTRTKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS
Ga0307292_101383042	3300028811	Soil	MPAKSKMTLSREGVMSDQRKPRGLARFRKREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTTTENPWDAVYYAADKERPS
Ga0307499_101938542	3300031184	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTITVSKGEGTPPDSNAANPWDKVYAADEERPS
Ga0318516_101177332	3300031543	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318534_102111522	3300031544	Soil	MSDHRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318538_102766122	3300031546	Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0318515_103452902	3300031572	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS
Ga0310915_106908682	3300031573	Soil	GLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310915_109366661	3300031573	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDDNTNNPWNEV
Ga0318561_100915493	3300031679	Soil	KPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0318574_109558361	3300031680	Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWDEVYAADQKRPS
Ga0318501_101063052	3300031736	Soil	FARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0307468_1021354832	3300031740	Hardwood Forest Soil	MPDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGEGAPPDSKRANPWNEVYAADQERPS
Ga0318492_101718672	3300031748	Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVPSEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0318535_105256161	3300031764	Soil	SREGVMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWDEVYAADQKRPS
Ga0318521_101177523	3300031770	Soil	RGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0318546_101693533	3300031771	Soil	DQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318546_105527281	3300031771	Soil	DQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS
Ga0318543_101186252	3300031777	Soil	REGVMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318498_100361641	3300031778	Soil	SKNDHLRAGSREGVMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318498_103119401	3300031778	Soil	REVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0318503_100334411	3300031794	Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318576_100888581	3300031796	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWDEVYAADQKRPS
Ga0318565_100723241	3300031799	Soil	LRAGSREGVMSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318497_106809962	3300031805	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEEMPPDSNTDNPWNEVYAADQKRPS
Ga0318568_100791513	3300031819	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTILVPSEGMPPDNNTDNPWDEVYAADQKRPS
Ga0318499_102699271	3300031832	Soil	GSREGVMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGLYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310917_100636403	3300031833	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRCTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0306919_100893211	3300031879	Soil	RFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0306919_101433091	3300031879	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGDAPPDTITANPWDAVYDTDSKRPA
Ga0306919_107886111	3300031879	Soil	KPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEAEGMPPDSNTDNPWNEVYAADQKRPS
Ga0318544_101781092	3300031880	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0318522_100433972	3300031894	Soil	MSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318522_103779032	3300031894	Soil	ARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS
Ga0318551_101119273	3300031896	Soil	KSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318551_107495552	3300031896	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVANEGGAPPDTTTANPWDAVYVTDSKRPA
Ga0306923_104282221	3300031910	Soil	VMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0306923_104497042	3300031910	Soil	VMSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310912_100776581	3300031941	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVY
Ga0310916_111623181	3300031942	Soil	MSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310910_101720161	3300031946	Soil	MSDQRKPRGFARFREREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0306926_117949041	3300031954	Soil	MSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGCYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0306922_103003352	3300032001	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310911_101154281	3300032035	Soil	KPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0318506_100540053	3300032052	Soil	MSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0318506_103963881	3300032052	Soil	PFLRKRTRRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGDAPPDTITANPWDAVYDTDSKRPA
Ga0318575_107021232	3300032055	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGDAPPDTITANPWDEV
Ga0318533_101726003	3300032059	Soil	DQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0318505_100787953	3300032060	Soil	FARFREREVTRITKAVRVAGGGKVTLDPETGHYTILVASEGDAPPDTITANPWDAVYDTDSKRPA
Ga0318510_101187722	3300032064	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDNNTDNPWNEVYAADQKRPS
Ga0318513_100873313	3300032065	Soil	KPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGMPPDNNTDNPWDEVLTDAAHQKRTA
Ga0310890_112708301	3300032075	Soil	ARFRERELARITKALRGAGGGKFTLDPKTGLYTIAVASEGEGTPPDNNPDNPWNEVYAAD
Ga0318525_101817042	3300032089	Soil	MSDQRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0306920_1003549491	3300032261	Soil	MSKPRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYA
Ga0306920_1032565153	3300032261	Soil	MSKPRKPRGFARFREREVTRITKAVRVAGGGKVTLDPESGCYTIVVASEGEGMPPDSNTDNPWNEVYA
Ga0310914_103032432	3300033289	Soil	SKLRKPRGLARFREREVTRITKAVRVAGGGKVTLDPESGRYTIVVASEGEGMPPDSNTDNPWNEVYAADQKRPS
Ga0310914_103097722	3300033289	Soil	RFPKREVTRITEAVRVAGGGKVTLDPETGHYTILVASEGGAPPDTITANPWDAVYDTDSKRPA
Ga0364925_0335534_209_466	3300034147	Sediment	MTPARREWGSGMSDQRKPRGLARFREREVTRITKAVRVAGGGKVTLDPETGRYTIVVASEGTPPDSNTDNPWNEVLYAADQERPS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060888

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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