Metagenome / Metatranscriptome Family F060886

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060886
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	66 residues
Representative Sequence	MASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLDHARGTIECRRGHQIRVERDGR
Number of Associated Samples	111
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.30 %
% of genes near scaffold ends (potentially truncated)	28.03 %
% of genes from short scaffolds (< 2000 bps)	89.39 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.212 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.939 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.424 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.32% β-sheet: 27.66% Coil/Unstructured: 67.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
b.4.1.1: HSP40/DnaJ peptide-binding domain	d1c3ga1	1c3g	0.63
b.4.1.1: HSP40/DnaJ peptide-binding domain	d1c3ga1	1c3g	0.63
b.4.1.0: HSP40/DnaJ peptide-binding domain	d2q2ga1	2q2g	0.6
b.4.1.0: HSP40/DnaJ peptide-binding domain	d2q2ga1	2q2g	0.6
b.4.1.0: HSP40/DnaJ peptide-binding domain	d2q2ga2	2q2g	0.59
b.1.6.0: Cadherin-like	d5i8da2	5i8d	0.59
b.4.1.0: HSP40/DnaJ peptide-binding domain	d2q2ga2	2q2g	0.59
b.1.6.0: Cadherin-like	d5i8da2	5i8d	0.59
b.1.6.0: Cadherin-like	d5i8da3	5i8d	0.58
b.1.6.0: Cadherin-like	d5i8da3	5i8d	0.58

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03796	DnaB_C	49.24
PF01699	Na_Ca_ex	28.03
PF14890	Intein_splicing	6.82
PF00999	Na_H_Exchanger	6.06
PF00709	Adenylsucc_synt	1.52
PF00877	NLPC_P60	1.52
PF03572	Peptidase_S41	0.76
PF00583	Acetyltransf_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	49.24
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	49.24
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	28.03
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	28.03
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	6.06
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	6.06
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	6.06
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	6.06
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	6.06
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	1.52
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	1.52
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.73 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.73 %
Unclassified	root	N/A	2.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.21 %
Unclassified	root	N/A	2.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.24 %
Unclassified	root	N/A	2.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	74.24 %
Unclassified	root	N/A	2.27 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.03 %
Unclassified	root	N/A	2.27 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.52 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.03 %
Unclassified	root	N/A	2.27 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	1.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.03 %
Unclassified	root	N/A	2.27 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1.52 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10058341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300000953\|JGI11615J12901_10342010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300000956\|JGI10216J12902_104464401	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300000956\|JGI10216J12902_105792583	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300000956\|JGI10216J12902_106263286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300000956\|JGI10216J12902_107701240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2319	Open in IMG/M
3300000956\|JGI10216J12902_115526805	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300002568\|C688J35102_118203933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300002568\|C688J35102_119280804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300002568\|C688J35102_120909701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2227	Open in IMG/M
3300002568\|C688J35102_120966585	All Organisms → cellular organisms → Bacteria	3486	Open in IMG/M
3300004114\|Ga0062593_101397175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300004114\|Ga0062593_103306046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300004157\|Ga0062590_100484728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300004479\|Ga0062595_100064565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1762	Open in IMG/M
3300004479\|Ga0062595_100200044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300004479\|Ga0062595_101146030	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300004479\|Ga0062595_101390242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300004480\|Ga0062592_100467417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300004643\|Ga0062591_101539457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300005167\|Ga0066672_10642813	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005180\|Ga0066685_10268196	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005187\|Ga0066675_10754569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300005332\|Ga0066388_100255289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2393	Open in IMG/M
3300005337\|Ga0070682_100098191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1929	Open in IMG/M
3300005446\|Ga0066686_11032691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300005447\|Ga0066689_10163320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1332	Open in IMG/M
3300005447\|Ga0066689_10243692	Not Available	1104	Open in IMG/M
3300005467\|Ga0070706_100930155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300005540\|Ga0066697_10157881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300005545\|Ga0070695_100476663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300005545\|Ga0070695_101344605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300005554\|Ga0066661_10171914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300005556\|Ga0066707_10533425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300005587\|Ga0066654_10611817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300005598\|Ga0066706_10911569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300005615\|Ga0070702_100719844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300005713\|Ga0066905_100256259	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300005713\|Ga0066905_101892910	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005764\|Ga0066903_100033912	All Organisms → cellular organisms → Bacteria	5853	Open in IMG/M
3300005764\|Ga0066903_101113036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1457	Open in IMG/M
3300005983\|Ga0081540_1350391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300005985\|Ga0081539_10015484	All Organisms → cellular organisms → Bacteria	5537	Open in IMG/M
3300006046\|Ga0066652_101722370	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006048\|Ga0075363_100840440	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	560	Open in IMG/M
3300006574\|Ga0074056_10005836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1176	Open in IMG/M
3300006796\|Ga0066665_11382269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300006800\|Ga0066660_11403865	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006845\|Ga0075421_100141113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3015	Open in IMG/M
3300006854\|Ga0075425_101406941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300006871\|Ga0075434_102439697	Not Available	525	Open in IMG/M
3300009012\|Ga0066710_100785286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1459	Open in IMG/M
3300009012\|Ga0066710_103078202	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300009090\|Ga0099827_10434036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300009090\|Ga0099827_10476433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300009147\|Ga0114129_10101122	All Organisms → cellular organisms → Bacteria	3989	Open in IMG/M
3300009148\|Ga0105243_12869354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300009792\|Ga0126374_10003128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5383	Open in IMG/M
3300010039\|Ga0126309_11117640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300010044\|Ga0126310_10141674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300010046\|Ga0126384_12481662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300010303\|Ga0134082_10214923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300010322\|Ga0134084_10157028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300010337\|Ga0134062_10379186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300010337\|Ga0134062_10751817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300010371\|Ga0134125_10477354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300010373\|Ga0134128_11338341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300010398\|Ga0126383_10753310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300010398\|Ga0126383_12410143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300010399\|Ga0134127_11907776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300010401\|Ga0134121_10428847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300011994\|Ga0120157_1063249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300012201\|Ga0137365_11106642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300012207\|Ga0137381_10680874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300012211\|Ga0137377_11533175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300012355\|Ga0137369_10738226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300012356\|Ga0137371_11287076	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300012357\|Ga0137384_10457803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300012929\|Ga0137404_11192439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300012930\|Ga0137407_10324467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300012930\|Ga0137407_10752609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300012941\|Ga0162652_100019274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300012957\|Ga0164303_10039413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2013	Open in IMG/M
3300012971\|Ga0126369_10701811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300012975\|Ga0134110_10358684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300012989\|Ga0164305_11923444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300013308\|Ga0157375_11700358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300013763\|Ga0120179_1091214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300014058\|Ga0120149_1139820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300014166\|Ga0134079_10128022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1001	Open in IMG/M
3300015264\|Ga0137403_10187238	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300015371\|Ga0132258_11273505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1858	Open in IMG/M
3300015373\|Ga0132257_102996107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300017997\|Ga0184610_1113785	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300018071\|Ga0184618_10007312	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300018076\|Ga0184609_10563975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300018431\|Ga0066655_10622568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300018433\|Ga0066667_11876823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300018468\|Ga0066662_11393233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300018482\|Ga0066669_12189567	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300019362\|Ga0173479_10631759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300019878\|Ga0193715_1047549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300020002\|Ga0193730_1024895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1731	Open in IMG/M
3300020018\|Ga0193721_1154257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300021560\|Ga0126371_11763039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300025910\|Ga0207684_11033340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300026078\|Ga0207702_10975878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300026088\|Ga0207641_12583062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300026309\|Ga0209055_1291924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300026317\|Ga0209154_1263317	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026329\|Ga0209375_1138163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300026332\|Ga0209803_1058857	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1669	Open in IMG/M
3300027775\|Ga0209177_10434023	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300027882\|Ga0209590_10969865	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300027909\|Ga0209382_10160885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2595	Open in IMG/M
3300028707\|Ga0307291_1082220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300028716\|Ga0307311_10124343	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300028744\|Ga0307318_10130462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300028755\|Ga0307316_10356148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300028771\|Ga0307320_10465109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300028784\|Ga0307282_10634259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300028793\|Ga0307299_10177261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300028819\|Ga0307296_10078704	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300028819\|Ga0307296_10654211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300028828\|Ga0307312_10365201	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300028876\|Ga0307286_10028399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1835	Open in IMG/M
3300028878\|Ga0307278_10017930	All Organisms → cellular organisms → Bacteria	3281	Open in IMG/M
3300028881\|Ga0307277_10060527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1556	Open in IMG/M
3300028884\|Ga0307308_10203876	Not Available	948	Open in IMG/M
3300031093\|Ga0308197_10034869	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031421\|Ga0308194_10014399	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300032205\|Ga0307472_101734935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.39%
Host-Associated	Host-Associated	10.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.12%
Plants	Host-Associated → Plants	10.61%
Aquatic	Environmental → Aquatic	2.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Sediment	Environmental → Aquatic → Sediment	2.27%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.27%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.27%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100583412	3300000891	Soil	VATWAVLREQVVWISPLATGFTVVCDRCAEDGEDFPSVQATLPLERARATVECRRGHQLWVERDGR*
JGI11615J12901_103420102	3300000953	Soil	VASWAVLTEQVVWVSPLATGFTVVCERCTDLGETFPSVQATLSLDHVRGTIECRRGHQIRIERDGR*
JGI10216J12902_1044644011	3300000956	Soil	VASWAVLREQVVWISPLATGFTVVCDRCAEAGEDFPSVQATLPLERARATVECRRGHQLWVERDGR*
JGI10216J12902_1057925832	3300000956	Soil	MATWAVLHEQVVWISPLATGFTVVCDRCAEEGADFPSVQATLPLDHARATVECRRGHQLRVERDGR*
JGI10216J12902_1062632862	3300000956	Soil	MASWAVASEQVVWISPRATGFTIVCERCAALGETFPSVQATLSLDHTRGTIECMRGHQIRIERDGR*
JGI10216J12902_1077012402	3300000956	Soil	MASWVLTEQTVWIATRATAFTIICERCAELDEDFPSIHGILALDHLRGTIECLRGHQIGVERDGR*
JGI10216J12902_1155268052	3300000956	Soil	MMATWAVLHEQVVWISPLATGFTVVCDRCAEDDEDFPSVHATLPLDRLRATVECRRGHQLRVERDGR*
C688J35102_1182039332	3300002568	Soil	MASWAVLHEQIVWISPLATGFTVVCERCADLGETFPSVQASLGLDRMRGTISCQRGHEIRVERDGR*
C688J35102_1192808041	3300002568	Soil	VRGPGGVKVASWAIESEQVAWISPLATGFTVVCERCAGEGELFPSVEGRLSLEYMRGTVQCPYGHRIRVERDGR*
C688J35102_1209097012	3300002568	Soil	VASWAVLSEQVVWISPLATGFTVVCERCAGEGEIFPSTHARLSLEHMRGTVQCPYGHRIRVERDGR*
C688J35102_1209665851	3300002568	Soil	VASWAVESEQVAWISPLATGFTVVCDRCAGQGEIFASVHARLSLEHMRGTIECPKAHQIRIERDGR*
Ga0062593_1013971751	3300004114	Soil	VASWAVLTEQVVWISPLATGFTVVCERCADLGETFPSVQATLSLDHARGTIECQRGHQIRIERDGR*
Ga0062593_1033060461	3300004114	Soil	REVRGPGGVMATWAVLHEQVVWISPLATGFTVVCERCAEDGEPFPSVHATLSLDHARATIECRRGHQLHIERDGR*
Ga0062590_1004847282	3300004157	Soil	MASWAVIGEQVVWISPRAMGFTVVCERCAEAGEGFPSVQGTLPLERVRGSMCCPHGHEIRIERDGR*
Ga0062595_1000645653	3300004479	Soil	VASWAVLSEQVVWISQLATGFTVVCERCVDAGDSFPSVQGTLSLDHARGTLTCRRGHEIRVERDGR*
Ga0062595_1002000441	3300004479	Soil	WISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCMRGHQIRVERDGR*
Ga0062595_1011460302	3300004479	Soil	MATWAVLHEQVVWISPLATGFTVVCDRCAEAGEDFPSVHATLPLDRLRATVECRRGHQLHVERDGR*
Ga0062595_1013902422	3300004479	Soil	LASWVLTEQVVWIATRATAFTIICERCAELKEDFPSIHGTLSLDHLRGTIECPSGHQIRIERDGR*
Ga0062592_1004674172	3300004480	Soil	MASWAVLTEQIVWISPLATGFTVVCERCSELGELFPSVQANLSLDHLRTTIECRRGHSIRVERDGR*
Ga0062591_1015394572	3300004643	Soil	VASWAVLTEQVVWISPLATGFTVVCERCADLGETFPSVQATLSLEHARGTIECQRGHQIRIERDGR*
Ga0066672_106428131	3300005167	Soil	MASWAVMTEQVVWISPRATGFTVVCDRCAELGETFPSVQATLSLEHLRGTVDCPRG
Ga0066685_102681962	3300005180	Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECARGHQVRVERDGR*
Ga0066675_107545692	3300005187	Soil	MASWVLTEQIVWIATRATAFTIICERCAELDEDFPSIHGILALDHLRGTIECLRGHQIRVERDGR*
Ga0066388_1002552893	3300005332	Tropical Forest Soil	MASWAVLSEQVVWISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCRRGHQIRVERDGR*
Ga0070682_1000981913	3300005337	Corn Rhizosphere	TWRRSVASWAVLTEQVVWISPLATGFTVVCERCADLGETFPSVQATLSLDHARGTIECQRGHQIRIERDGR*
Ga0066686_110326912	3300005446	Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECVRGHQVRVERDGR*
Ga0066689_101633201	3300005447	Soil	MASWAVVGEQVVWISPLATGFTVVCERCAESGQGFPSVQGTPSLEHARGHLSCPRGHDIR
Ga0066689_102436921	3300005447	Soil	MASWVLTEQVVWISARATGFTIVCERCAETADDFPDDFPSIHGTLSLDHLRGTIE
Ga0070706_1009301552	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MASWAVISEQVVWISPLATGFTVVCERCAEDGETFASVQATLSLDHLRGTIDCRRGHQIRVERDGR*
Ga0066697_101578813	3300005540	Soil	MASWVLTEQIVWIATRATAFTIICERCAELNEDFPSIHGTLSLDHLRGTIECLRGHQIRVERDGR*
Ga0070695_1004766632	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MASWAVIGEQVVWISPRAMGFTVVCERCVEAGEGFPSVQGTLSLERVRGSMCCPHGHEIRIERDGR*
Ga0070695_1013446051	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GGVMASWAVITEQVVWISPLATGFTVVCERCAEDGETFASVQATLSLDHLRGTIDCRRGHQIRVERDGR*
Ga0066661_101719141	3300005554	Soil	SATRSSRTWRRNVASWAVLTEQTVWISPLATGFTVLCNRCAESGETFPSVQATLSLDHLRGTIECPHGHQIRVERDGR*
Ga0066707_105334252	3300005556	Soil	MASWAVMTEQVVWISPRATGFTVVCDRCAELGETFPSVQATLSLEHLRGTVDCQRGHQIRVERDGR*
Ga0066654_106118172	3300005587	Soil	ALREVRGPGGLMASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECARGHQVRVERDGR*
Ga0066706_109115691	3300005598	Soil	LREVRGPGGLMASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECARGHQVRVERDGR*
Ga0070702_1007198442	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MASWLVLNEQVVWISPLATGFTVVCERCADLGETFPSVQATLGLDRMRGTISCSRGHEIRVERDGR*
Ga0066905_1002562592	3300005713	Tropical Forest Soil	MASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLDHARGTIECRRGHQIRVERDGR*
Ga0066905_1018929102	3300005713	Tropical Forest Soil	MATWAVLHEQVVWISPLATGFTVVCDRCAEERVDFPSVQATLPLDRARATVECRRGHQLRVERDGR*
Ga0066903_1000339127	3300005764	Tropical Forest Soil	MASWALANEQVVWISPRATGFTIVCDRCAALGERFPSVQATLPLDHPHGTIECMRGHSIRIERDGR*
Ga0066903_1011130363	3300005764	Tropical Forest Soil	MASWAVLSEQVVWISPLATGFTVVCERCADEGATFPSVQATLSLDHPRGTIECVRGHQIRVERDGR*
Ga0081540_13503912	3300005983	Tabebuia Heterophylla Rhizosphere	MASWAVLSEQVVWISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCARGHQIRVERDGR*
Ga0081539_100154842	3300005985	Tabebuia Heterophylla Rhizosphere	MASWAVIAEQVVWISPLATGFTVVCERCASDGETFPSVQATLSLDHQRGTIDCRRGHQIRVERDGR*
Ga0066652_1017223702	3300006046	Soil	MATWAVLHEQVVWISPLATGFTVVCDRCAEDDEDFPSVHATLPLDRLRATVECRRGHQLRVERDGR*
Ga0075363_1008404402	3300006048	Populus Endosphere	MASWAVLTEQIVWISPLATGFTVVCERCSELGELFPSVQANLSLDHLRTTIECPR
Ga0074056_100058362	3300006574	Soil	VASWAVLTEQVVWISQLATGFTVVCERCAELGEVFPSVQGTLSLDRARGTISCTRGHDLRIERDGR*
Ga0066665_113822692	3300006796	Soil	MASWVLTEQIVWIATRATAFTHIFERCAELNEDFPSIHGTLSLDHLRGTIECLRGHQIRVERDGR*
Ga0066660_114038652	3300006800	Soil	VASWAVLTEQTVWISPLATGFTVLCNRCAESGETFPSVQATLSLDHLRGTIECPHGHQIRVERDGR*
Ga0075421_1001411132	3300006845	Populus Rhizosphere	VATWAVLREQVVWISPLATGFTVVCDRCAEDGEDFSSVQATLPLERARATVECRRGHQLWVERDGR*
Ga0075425_1014069411	3300006854	Populus Rhizosphere	VWISPLATGFTVVCERCADLGETFPSVQATLSLEHARGTIECQRGHQIRIERDGR*
Ga0075434_1024396972	3300006871	Populus Rhizosphere	WAVLTEQVVWISPLATGFTVVCERCADLGETFPSVQATLSLDHARGTIECQRGHQIRIERDGR*
Ga0066710_1007852863	3300009012	Grasslands Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECARGHQVRVERDGR
Ga0066710_1030782022	3300009012	Grasslands Soil	MASWVLTEQIVWIATRATAFTIICERCAELNEDFPSIHGTLSLDHLRGTIECLRGHQIRVERDGR
Ga0099827_104340362	3300009090	Vadose Zone Soil	MASWAVVGEQVVWVSPRATAFTVVCKRCTESGESFPSVQGTLSLDHVRGRITCRRGHELRVERDGR*
Ga0099827_104764332	3300009090	Vadose Zone Soil	MASWAVVGEQVVWISPLATGFTIVCERCAESGQIFPSVQGTLSLEQGRGQMSCPHGHDIRIERDGR*
Ga0114129_101011222	3300009147	Populus Rhizosphere	MASWAVISEQVVWISPLATGFTVVCERCAEDGETFPSVQATLSLDHLRGTIDCRRGHQIRVERDGR*
Ga0105243_128693542	3300009148	Miscanthus Rhizosphere	MASWAVISEQVVWISPRAMGFTVVCERCAEAGEGFPSVQGTLPLERVRGSMCCPRGHEI
Ga0126374_100031286	3300009792	Tropical Forest Soil	MASWALASEQVVWISPRATGFTIVCDRCMALGETFPSVQATLSLDHARGTIECMRGHQIRVERDGR*
Ga0126309_111176401	3300010039	Serpentine Soil	VASWAVLTEQTVWISPLATGFTVVCERCASSGETFPSVQATLALEHVRGRFDCRRGHQIRVERDGR
Ga0126310_101416742	3300010044	Serpentine Soil	MASWAVVSEQAVWISPLATGFTVVCERCAALGEAFPSVQATLSLEHARGTIDCRRGHQIRIERDGR*
Ga0126384_124816622	3300010046	Tropical Forest Soil	MASWALVSEQVVWISPRATGFTIVCDRCAALGETFPSVQATLSLDHVRATIECMRGHQIRVER
Ga0134082_102149231	3300010303	Grasslands Soil	QVVWISSLATGFTVVCERCAEMDEAFPSVQGTLALEHLRGTIECARGHQVRVEREGR*
Ga0134084_101570281	3300010322	Grasslands Soil	REVRGSGGVMASWAVLSEQVVWISPLATGFTIVCERCTQLGEAFPSVQATLSLEHMRGTIDCRRGHQIRVERDGR*
Ga0134062_103791862	3300010337	Grasslands Soil	MASWAILTEQIVWISPLATGFTVVCDRCSDLGEAFPSVQATLSLEHQRGTIECRRGHQIRVERDGR*
Ga0134062_107518171	3300010337	Grasslands Soil	MASWAVVGEQVVWISPRAMGFTVVCERCVEFGEGFPSVQGTLSLDHMRGTIACPWGHEIRIERDGR*
Ga0134125_104773542	3300010371	Terrestrial Soil	MASWAVLSEQVVWISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCTRGHQIRVERDGR*
Ga0134128_113383412	3300010373	Terrestrial Soil	EVRGSGGCLVASWAVLSEQVVWISQLATGFTVVCERCVDAGDSFPSVQGTLSLDHARGTLTCRRGHEIRVERDGR*
Ga0126383_107533102	3300010398	Tropical Forest Soil	MASWALVSEQVVWISPRATGFTIVCDRCAALGETFPSVQATMSLDHVRTTIECMRGHQIRVEREGR*
Ga0126383_124101431	3300010398	Tropical Forest Soil	MASWAVLSEQVVWISPLATGFTVVCERCADEGATFPSVQATLSLDHPRGTIECVRGHQIRIERDGR*
Ga0134127_119077762	3300010399	Terrestrial Soil	MASWVLTEQIVWISARATGFTVVCERCAELNEDFPSIHGALALEHLRGTIDCSRGHQIRVERDGR*
Ga0134121_104288472	3300010401	Terrestrial Soil	VASWAVLTEQVVWISHLATGFTVVCERCAELGEVFPSVQGTLSLERSRGTISCPLGHELRIERDGR*
Ga0120157_10632492	3300011994	Permafrost	MASWAVIGEQVVWISHLATAFTVVCERCADNGESFPSVQGTLSLEHVRGHLTCRRGHEIRVERDGR*
Ga0137365_111066421	3300012201	Vadose Zone Soil	MASWAVVGEQVVWISPLATGFTVVCERCAESGQIFPSAQGTLSLEHSRGHISCPHGHDIRIERDGR*
Ga0137381_106808741	3300012207	Vadose Zone Soil	MASWVLTEQVVWIATRATAFTIICERCAELNEDFPSIHGTLSLDHLRGTIECLRGHQIRIERDGR*
Ga0137377_115331752	3300012211	Vadose Zone Soil	MASWAVVGEQVVWISPLATGFTVVCERCAESGQIFPSAQGTLSLEHSRGHISCPQGHDIRIERDGR*
Ga0137369_107382262	3300012355	Vadose Zone Soil	VASWAVLTEQVVWISPLATGFTVVCERCTDLGQTFPSVHATLSLDHVRGTIECRRGHQIRIERDGR*
Ga0137371_112870761	3300012356	Vadose Zone Soil	MASWAVVGEQVVWISARATGFTIVCERCAELDEDFPSIHGTLPRDHLRGTIECRRGHQVRIERAGR*
Ga0137384_104578032	3300012357	Vadose Zone Soil	VGEQVVWISPLATGFTVVCERCAESGQIFPSAQGTLSLEHSRGHISCPQGHDIRIERDGR
Ga0137404_111924392	3300012929	Vadose Zone Soil	MASWAVVGEQVVWISPMATAFTVVCERCADTGEGFPSVQGTLLLEHARGHMTCPHGHEIRVERDGR*
Ga0137407_103244672	3300012930	Vadose Zone Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHARGHMVCPHGHELRVERDGR*
Ga0137407_107526092	3300012930	Vadose Zone Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMTCAHGHEIRVERDGR*
Ga0162652_1000192742	3300012941	Soil	MASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR*
Ga0164303_100394133	3300012957	Soil	MASWAVIGEQVVWISPRAMGFTVVCERCAEAGEGFPSVQGTLPLERARGSMCCPHGHEIRIERDGR*
Ga0126369_107018112	3300012971	Tropical Forest Soil	MASWALASEQVVWISPRATGFTIVCDRCTALGETFPSVQATLSLDHTRGTIECMRGHQIRVERDGR*
Ga0134110_103586842	3300012975	Grasslands Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSVQATLSLEHLRSTIDCPRRHQIRVERDGR*
Ga0164305_119234441	3300012989	Soil	SWAVIGEQVVWISPRAMGFTVVCERCAEAGEGFPSVQGTLPLERARGSMCCPHGHEIRIERDGR*
Ga0157375_117003582	3300013308	Miscanthus Rhizosphere	MASWAVLSEQVVWISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCMRGHQIRVERDGR*
Ga0120179_10912141	3300013763	Permafrost	MASWAVIGEQVVWISHLATAFTVVCERCADSGESFPSVQGTLSLEHVRGHLTCRRGHEIRVERDGR*
Ga0120149_11398202	3300014058	Permafrost	MASWAVIGEQVVWISHLATAFTVVCERCADSGESFPSVQGTLSLEHVRGHMTCRRGHEIRVERDGR*
Ga0134079_101280221	3300014166	Grasslands Soil	MASWAVLTEQIVWISPLATGFTVVCERCSELGELFPSVQATLSLDQIRSTIECTR
Ga0137403_101872382	3300015264	Vadose Zone Soil	MASWAVVGEQVVWISPLAMGFTVVCERCADSGEGFPSVQGTLLLEHARGHMTCPHGHEIRVERDGR*
Ga0132258_112735052	3300015371	Arabidopsis Rhizosphere	MASWAVLSEQIVWISPVATGFTVICERCAELGETFPSVQATLALDHQRGTIDCRRGHQIRVERDGR*
Ga0132257_1029961071	3300015373	Arabidopsis Rhizosphere	VRGPGGLMASWAVLSEQIVWISPVATGFTVICERCAELGETFPSVQATLALDHQRGTIDCRRGHQIRVERDGR*
Ga0184610_11137852	3300017997	Groundwater Sediment	MASWAVLTEHVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0184618_100073123	3300018071	Groundwater Sediment	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMVCSRGHELRVERDGR
Ga0184609_105639751	3300018076	Groundwater Sediment	AVVPQALRQVRGSGGLMASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0066655_106225682	3300018431	Grasslands Soil	MASWALTEQVVWISARATGFTIVCERCAELDEDFPSIHGTLSLDHLRGTIECRRGHQVRIERDGR
Ga0066667_118768231	3300018433	Grasslands Soil	ISARATGFTIVCERCAEMADDFPDNFPSIQGTLSLDHLRGTIECPRGHQVRVERDGR
Ga0066662_113932332	3300018468	Grasslands Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSIEGTLSLEHLRGTIECQRGHQVRIERDGR
Ga0066669_121895671	3300018482	Grasslands Soil	MATWAVLHEQVVWISPLATGFTVVCDRCAEDDEDFPSVHATLPLDRLRATVECRRGHQLRVERDGR
Ga0173479_106317592	3300019362	Soil	MASWAVIGEQVVWISPRAMGFTVVCERCAEAGEGFPSVQGTLPLERVRGSMCCPHGHEIRIERDGR
Ga0193715_10475492	3300019878	Soil	MASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0193730_10248952	3300020002	Soil	MASWAVVGEQVVWISPLATAFTVVCERCADAGEGFPSVQGTLSLEHVRGHMVCMRGHEIRVERDGR
Ga0193721_11542572	3300020018	Soil	MASWAVIGEQVVWISPLAIGFTVVCERCVELGEGFPSVQGTLSLDHLRGSMACSRGHEIRVERDGR
Ga0126371_117630392	3300021560	Tropical Forest Soil	MASWALANEQVVWISPRATGFTIVCDRCAALGERFPSVQATLPLDHPHGTIECMRGHSIRIERDGR
Ga0207684_110333402	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MASWAVISEQVVWISPLATGFTVVCERCAEDGETFASVQATLSLDHLRGTIDCRRGHQIRVERDGR
Ga0207702_109758782	3300026078	Corn Rhizosphere	VASWAVLTEQVVWISPLATGFTVVCERCADLGETFPSVQATLSLEHARGTIECQRGHQIRIERDGR
Ga0207641_125830622	3300026088	Switchgrass Rhizosphere	MASWAVLSEQVVWISPLATGFTVICERCAELGETFPSVQATLALDHQRGTIDCMRGHRIRVERDGR
Ga0209055_12919242	3300026309	Soil	ALREVRRPGGLMASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSIQGTLSLEHLRGTIECQRGHQVRIERDGR
Ga0209154_12633171	3300026317	Soil	MASWAVMTEQVVWISPRATGFTVVCDRCAELGETFPSVQATLSLEHLRGTVDCPRGHQIR
Ga0209375_11381632	3300026329	Soil	MASWVLTEQIVWIATRATAFTIICERCAELDEDFPSIHGILALDHLRGTIECLRGHQIRVERDGR
Ga0209803_10588571	3300026332	Soil	MASWVLTEQVVWISSLATGFTVVCERCAEMDEAFPSIQGTLSLEHLRGTIECQRGHQVRIERDGR
Ga0209177_104340232	3300027775	Agricultural Soil	VASWAVLSEQVVWISQLATGFTVVCERCVDAGDSFPSVQGTLSLDHARGTLTCRRGHEIRVERDGR
Ga0209590_109698652	3300027882	Vadose Zone Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMTCSHGHEIRVERDGR
Ga0209382_101608852	3300027909	Populus Rhizosphere	VATWAVLREQVVWISPLATGFTVVCDRCAEDGEDFSSVQATLPLERARATVECRRGHQLWVERDGR
Ga0307291_10822201	3300028707	Soil	EQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0307311_101243432	3300028716	Soil	MASWAVVGEQVVWISPLATAFTVVCERCAGAGEGFPSVQGTLSLEHVRGHMVCMRGHEIRVERDGR
Ga0307318_101304621	3300028744	Soil	LTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0307316_103561482	3300028755	Soil	SWAVLSEQIVWISPLATGFTVICDRCADLGETFPSVQATLSLDRVRGTIDCPHGHQIRVERDGR
Ga0307320_104651092	3300028771	Soil	ALREVRGSGGRLMASWAVLQEQTVWISPLATGFTVVCDRCAELGEPFPSVQATLALEYVRGSIECRRGHQIRVERDGR
Ga0307282_106342592	3300028784	Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVHGTLSLEHVRGHMVCSRGHEIRVERDGR
Ga0307299_101772612	3300028793	Soil	GSRFLMASWAVVGEQVVWISPLATAFTVVCERCAGAGEGFPSVQGTLSLEHVRGHMVCMRGHEIRVERDGR
Ga0307296_100787041	3300028819	Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMVCMRGHEIRVERDGR
Ga0307296_106542112	3300028819	Soil	HRALPPAEPLMASWAVLSEQIVWISPLATGFTVICDRCADLGETFPSVQATLSLDRVRGTIDCPHGHQIRVERDGR
Ga0307312_103652011	3300028828	Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMVCSRGHEIRVER
Ga0307286_100283993	3300028876	Soil	MASWAVLTEQVVWISPLATGFTVVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRIERDGR
Ga0307278_100179301	3300028878	Soil	MASWAVLTEQVVWISPLATGFTIVCERCAELGETFPSVQATLSLEHVRGTIDCRRGHQIRVERDGR
Ga0307277_100605272	3300028881	Soil	MASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMVCSRGHEIRVERDGR
Ga0307308_102038762	3300028884	Soil	RFLMASWAVVGEQVVWISPLATAFTVVCERCADTGEGFPSVQGTLSLEHVRGHMVCSRGHEIRVERDGR
Ga0308197_100348691	3300031093	Soil	MASWAVIGEQVVWISPLATGFTVVCERCSESGQGFPSVQGTLSLEHARGHLTCPRGHDI
Ga0308194_100143992	3300031421	Soil	MASWAVVGEQVVWISPLATAFTVVCERCAETGEGFPSVQGTLSLERVRGHMTCLHGHEIRVERDGR
Ga0307472_1017349351	3300032205	Hardwood Forest Soil	MASWAVATEQVVWISPRATGFTVVCDRCASLGETFPSVQATLALDHQRGTIDCMRGHQIRVERDGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences