Metagenome / Metatranscriptome Family F060806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	68 residues
Representative Sequence	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPARETPRRVA
Number of Associated Samples	103
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	25.76 %
% of genes from short scaffolds (< 2000 bps)	62.12 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.485 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.35% β-sheet: 4.30% Coil/Unstructured: 76.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF05697	Trigger_N	19.70
PF14814	UB2H	16.67
PF05698	Trigger_C	10.61
PF00912	Transgly	7.58
PF03330	DPBB_1	3.79
PF00574	CLP_protease	3.79
PF02627	CMD	1.52
PF06689	zf-C4_ClpX	1.52
PF00590	TP_methylase	0.76
PF02502	LacAB_rpiB	0.76
PF00795	CN_hydrolase	0.76
PF10431	ClpB_D2-small	0.76
PF05638	T6SS_HCP	0.76
PF00578	AhpC-TSA	0.76
PF08543	Phos_pyr_kin	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0544	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	Posttranslational modification, protein turnover, chaperones [O]	30.30
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	7.58
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	7.58
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	7.58
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	7.58
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	7.58
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.79
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.52
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.52
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	0.76
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	0.76
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.76
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	0.76
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	75.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.09 %
Unclassified	root	N/A	1.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	75.00 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.79 %
Unclassified	root	N/A	1.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	75.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.79 %
Unclassified	root	N/A	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	40.15 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.79 %
Unclassified	root	N/A	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.15 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.79 %
Unclassified	root	N/A	1.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10001776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	6995	Open in IMG/M
3300002562\|JGI25382J37095_10014622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2989	Open in IMG/M
3300002908\|JGI25382J43887_10289420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	726	Open in IMG/M
3300003203\|JGI25406J46586_10032772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1927	Open in IMG/M
3300005167\|Ga0066672_10074157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2019	Open in IMG/M
3300005171\|Ga0066677_10010976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3926	Open in IMG/M
3300005171\|Ga0066677_10017428	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300005172\|Ga0066683_10041543	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2690	Open in IMG/M
3300005174\|Ga0066680_10898096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	526	Open in IMG/M
3300005175\|Ga0066673_10045274	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2195	Open in IMG/M
3300005175\|Ga0066673_10069849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1821	Open in IMG/M
3300005176\|Ga0066679_10487848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	804	Open in IMG/M
3300005176\|Ga0066679_10740197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	633	Open in IMG/M
3300005180\|Ga0066685_10958223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	568	Open in IMG/M
3300005184\|Ga0066671_10027028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2635	Open in IMG/M
3300005332\|Ga0066388_101642502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1133	Open in IMG/M
3300005440\|Ga0070705_100029670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3012	Open in IMG/M
3300005445\|Ga0070708_100105048	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300005451\|Ga0066681_10350361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	907	Open in IMG/M
3300005536\|Ga0070697_100130841	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2104	Open in IMG/M
3300005540\|Ga0066697_10009141	All Organisms → cellular organisms → Bacteria	5036	Open in IMG/M
3300005540\|Ga0066697_10018361	All Organisms → cellular organisms → Bacteria	3754	Open in IMG/M
3300005558\|Ga0066698_10188350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1408	Open in IMG/M
3300005558\|Ga0066698_11009419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300005559\|Ga0066700_11100645	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300005713\|Ga0066905_100352323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1177	Open in IMG/M
3300005937\|Ga0081455_10311094	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300005985\|Ga0081539_10000002	All Organisms → cellular organisms → Bacteria	601032	Open in IMG/M
3300006032\|Ga0066696_10033580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2766	Open in IMG/M
3300006049\|Ga0075417_10038870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2010	Open in IMG/M
3300006049\|Ga0075417_10068742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1565	Open in IMG/M
3300006755\|Ga0079222_10006672	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300006797\|Ga0066659_11147125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	650	Open in IMG/M
3300006800\|Ga0066660_10161569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1671	Open in IMG/M
3300006800\|Ga0066660_10711716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300006806\|Ga0079220_10727025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	735	Open in IMG/M
3300006844\|Ga0075428_100005998	All Organisms → cellular organisms → Bacteria → Proteobacteria	13496	Open in IMG/M
3300006969\|Ga0075419_10249288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1187	Open in IMG/M
3300007255\|Ga0099791_10013747	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300007258\|Ga0099793_10345931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	726	Open in IMG/M
3300009094\|Ga0111539_11827266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300009100\|Ga0075418_10008495	All Organisms → cellular organisms → Bacteria → Proteobacteria	11509	Open in IMG/M
3300009137\|Ga0066709_103062680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	612	Open in IMG/M
3300009147\|Ga0114129_10637858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1376	Open in IMG/M
3300009147\|Ga0114129_12704603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300009792\|Ga0126374_10074618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1829	Open in IMG/M
3300009810\|Ga0105088_1020045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1042	Open in IMG/M
3300010046\|Ga0126384_10004905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8165	Open in IMG/M
3300010046\|Ga0126384_11974576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	557	Open in IMG/M
3300010133\|Ga0127459_1170839	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300010141\|Ga0127499_1202416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300010320\|Ga0134109_10280477	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300010336\|Ga0134071_10001246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9073	Open in IMG/M
3300010336\|Ga0134071_10560885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	594	Open in IMG/M
3300010359\|Ga0126376_10030265	All Organisms → cellular organisms → Bacteria → Proteobacteria	3650	Open in IMG/M
3300010360\|Ga0126372_12167650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300011269\|Ga0137392_10894089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300012203\|Ga0137399_10470644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1052	Open in IMG/M
3300012203\|Ga0137399_10528057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	991	Open in IMG/M
3300012203\|Ga0137399_10921773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	736	Open in IMG/M
3300012203\|Ga0137399_10944391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300012203\|Ga0137399_10963970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	718	Open in IMG/M
3300012203\|Ga0137399_11362649	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	595	Open in IMG/M
3300012208\|Ga0137376_10861884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300012285\|Ga0137370_10468044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	769	Open in IMG/M
3300012371\|Ga0134022_1020553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	514	Open in IMG/M
3300012402\|Ga0134059_1155573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	510	Open in IMG/M
3300012409\|Ga0134045_1041028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300012410\|Ga0134060_1297890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300012582\|Ga0137358_10080301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2195	Open in IMG/M
3300012582\|Ga0137358_10095165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2014	Open in IMG/M
3300012685\|Ga0137397_10015504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5333	Open in IMG/M
3300012685\|Ga0137397_10148748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1734	Open in IMG/M
3300012918\|Ga0137396_10178692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1555	Open in IMG/M
3300012922\|Ga0137394_10187936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1763	Open in IMG/M
3300012925\|Ga0137419_10489080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	975	Open in IMG/M
3300012925\|Ga0137419_11733233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	533	Open in IMG/M
3300012927\|Ga0137416_10913659	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	781	Open in IMG/M
3300012929\|Ga0137404_10972478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300012930\|Ga0137407_10030011	All Organisms → cellular organisms → Bacteria	4224	Open in IMG/M
3300012930\|Ga0137407_10553230	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300012976\|Ga0134076_10000997	All Organisms → cellular organisms → Bacteria	8129	Open in IMG/M
3300012977\|Ga0134087_10391059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	675	Open in IMG/M
3300015053\|Ga0137405_1179889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2003	Open in IMG/M
3300015053\|Ga0137405_1402676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1340	Open in IMG/M
3300015264\|Ga0137403_10844198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	768	Open in IMG/M
3300015359\|Ga0134085_10036132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1942	Open in IMG/M
3300015371\|Ga0132258_10018404	All Organisms → cellular organisms → Bacteria	15130	Open in IMG/M
3300015371\|Ga0132258_10115677	All Organisms → cellular organisms → Bacteria → Proteobacteria	6361	Open in IMG/M
3300015373\|Ga0132257_102816082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	634	Open in IMG/M
3300017656\|Ga0134112_10008670	All Organisms → cellular organisms → Bacteria → Proteobacteria	3333	Open in IMG/M
3300017659\|Ga0134083_10009033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3294	Open in IMG/M
3300018431\|Ga0066655_10003888	All Organisms → cellular organisms → Bacteria → Proteobacteria	5897	Open in IMG/M
3300018433\|Ga0066667_10014734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3934	Open in IMG/M
3300018433\|Ga0066667_10208798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1443	Open in IMG/M
3300018468\|Ga0066662_11658151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300018482\|Ga0066669_10028766	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300018482\|Ga0066669_10060581	Not Available	2448	Open in IMG/M
3300020170\|Ga0179594_10108003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1005	Open in IMG/M
3300020199\|Ga0179592_10197894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	911	Open in IMG/M
3300024330\|Ga0137417_1069898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1812	Open in IMG/M
3300024330\|Ga0137417_1086114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1111	Open in IMG/M
3300024330\|Ga0137417_1364201	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1907	Open in IMG/M
3300025905\|Ga0207685_10848720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300025910\|Ga0207684_10000961	All Organisms → cellular organisms → Bacteria	32329	Open in IMG/M
3300026277\|Ga0209350_1142159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	539	Open in IMG/M
3300026295\|Ga0209234_1005272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4896	Open in IMG/M
3300026298\|Ga0209236_1005553	All Organisms → cellular organisms → Bacteria	7673	Open in IMG/M
3300026301\|Ga0209238_1046813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1564	Open in IMG/M
3300026312\|Ga0209153_1103801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1069	Open in IMG/M
3300026313\|Ga0209761_1002982	All Organisms → cellular organisms → Bacteria	11168	Open in IMG/M
3300026313\|Ga0209761_1097238	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1481	Open in IMG/M
3300026315\|Ga0209686_1059627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1375	Open in IMG/M
3300026316\|Ga0209155_1032732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2096	Open in IMG/M
3300026523\|Ga0209808_1210981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300026529\|Ga0209806_1006500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6538	Open in IMG/M
3300026530\|Ga0209807_1213650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300026548\|Ga0209161_10016270	All Organisms → cellular organisms → Bacteria	5448	Open in IMG/M
3300026550\|Ga0209474_10349660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	828	Open in IMG/M
3300026551\|Ga0209648_10056347	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3346	Open in IMG/M
3300027671\|Ga0209588_1064384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1185	Open in IMG/M
3300027873\|Ga0209814_10000628	All Organisms → cellular organisms → Bacteria	11840	Open in IMG/M
3300027873\|Ga0209814_10014314	All Organisms → cellular organisms → Bacteria → Proteobacteria	3163	Open in IMG/M
3300027873\|Ga0209814_10052139	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1707	Open in IMG/M
3300027880\|Ga0209481_10021638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2852	Open in IMG/M
3300028536\|Ga0137415_10451893	Not Available	1091	Open in IMG/M
3300031716\|Ga0310813_11165710	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300031720\|Ga0307469_12046023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	556	Open in IMG/M
3300032180\|Ga0307471_100001930	All Organisms → cellular organisms → Bacteria	11703	Open in IMG/M
3300032180\|Ga0307471_100133632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2345	Open in IMG/M
3300032421\|Ga0310812_10154626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	977	Open in IMG/M
3300033475\|Ga0310811_10334241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1714	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.36%
Host-Associated	Host-Associated	13.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.36%
Plants	Host-Associated → Plants	13.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.76%
Loam	Environmental → Terrestrial → Soil → Loam	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.09%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.27%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_1000177610	3300002558	Grasslands Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
JGI25382J37095_100146222	3300002562	Grasslands Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWWLRFTDGICPECATRFRAEYRAFIEWRDTGRELETRRRVA*
JGI25382J43887_102894202	3300002908	Grasslands Soil	VLVSRCAWHPRYFGYPLIGGIASWAGWSLKFTDGICPECATRFRIEYRAFIERRRRLEAGHDLETQRQIA*
JGI25406J46586_100327722	3300003203	Tabebuia Heterophylla Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCTARFRDEHRAXLERRRRESAREIESQRQVA*
Ga0066672_100741573	3300005167	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPERETPRRVA*
Ga0066677_100109763	3300005171	Soil	VLISRCAWHPRYHGYPLVDGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGPEVRRQVA*
Ga0066677_100174284	3300005171	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERRQPARETPRRVA*
Ga0066683_100415432	3300005172	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGPEVRRQVA*
Ga0066680_108980961	3300005174	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPARETPRRVA*
Ga0066673_100452742	3300005175	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIDRRAPKRETPRRVA*
Ga0066673_100698493	3300005175	Soil	HIRCSGLTPSNHWEVRVLLNRCAWHPRYHGYPLVGGVASWSGWGVQFTDGICADCAVRFRDENRAFFERRRLDDTHGPEVRRQVA*
Ga0066679_104878481	3300005176	Soil	RMLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPARETPRRVA*
Ga0066679_107401972	3300005176	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRAEYRDFIDRRAPKRGTPRRVA*
Ga0066685_109582231	3300005180	Soil	MLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRLRAEYQAFFERRRLEEAREVQRHVA*
Ga0066671_100270283	3300005184	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRQLDDTHGPEVRRQVA*
Ga0066388_1016425023	3300005332	Tropical Forest Soil	VLLSRCAWHPRYYGYPLVEGVASWSGWGVKFTDGICADCVGRFRDEHRAFLERHRRVDTAQKGEGERQVA*
Ga0070705_1000296702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLLTRCAWHPRYHGYPLVGGVASWSGWGVKFTDGICAACAVRFRDEHRAFLERRRTEAPREREPQRKVA*
Ga0070708_1001050481	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	WHPRYHGYPLVEGVVSWAGWGLKFTDGICHDCVTRFRAEYRDFIERREPQRETPRRVA*
Ga0066681_103503612	3300005451	Soil	VLLSRCAWHPRYHGYPLVGGITSWSGWGVKFTDGICANCAERFRAEYRAFFERRRVEDAQQFDVRRHIA*
Ga0070697_1001308413	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICHDCVIRFRAEYRDFIERRAPARELEAPRRVA*
Ga0066697_100091415	3300005540	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRQPARETPRRVA*
Ga0066697_100183612	3300005540	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDENRAFFERRRLDDTHGPEVRRQVA*
Ga0066698_101883501	3300005558	Soil	GHIRCTGLWRHERREVPVLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0066698_110094191	3300005558	Soil	RCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRLRAEYQAFFERRRLEEAREVQRHVA*
Ga0066700_111006452	3300005559	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIER
Ga0066905_1003523233	3300005713	Tropical Forest Soil	VLLTGCAWHPRYHGYPLVEGVVSWSGWGVKFTDGICADCAARFRAEHRAFLERRRPEAAREREAERQVA*
Ga0081455_103110942	3300005937	Tabebuia Heterophylla Rhizosphere	VLLSRCAWHPRYYGYPLVEGVASWSGWGVKFTDGICTDCTARFRDEHRVFLERRRLEAAARTLEAQQQVA*
Ga0081539_10000002479	3300005985	Tabebuia Heterophylla Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCTARFRDEHRAFLERRRRESAREIESQRQVA*
Ga0066696_100335801	3300006032	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRAPKRETPRR
Ga0075417_100388701	3300006049	Populus Rhizosphere	VWRTHGEVPVLLTRCAWHPRYHGYPLVEGVVSWGGWGVKFTDGICADCAARFRAEHRAFLERRRPDRSREREAERQVA*
Ga0075417_100687422	3300006049	Populus Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCATRFRAELRAFGERRRLEAAREVEAQQQVA*
Ga0079222_100066722	3300006755	Agricultural Soil	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCATRFRAEHREFFDRRRGEPADDIQATRQIA*
Ga0066659_111471251	3300006797	Soil	CRKERMLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERRQPARETPRRVA*
Ga0066660_101615692	3300006800	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRQLDDTHGSEVRRQVA*
Ga0066660_107117161	3300006800	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERR
Ga0079220_107270252	3300006806	Agricultural Soil	VLLTRCAWHPRYHGYPLVEGVVSWGGWGVKFTDGICADCAARFRAEHRAFLERRRPDRSREREAERQVA*
Ga0075428_1000059989	3300006844	Populus Rhizosphere	VLLTRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICSDCAARFRAEHRAFLERRRDEAVRQRDLERHVA*
Ga0075419_102492882	3300006969	Populus Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCATRFRAELRAFGERRRLEAAREVEAQHQVA*
Ga0099791_100137474	3300007255	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRTPERETPRRVA*
Ga0099793_103459311	3300007258	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIGRRAPERETPRRVA*
Ga0111539_118272662	3300009094	Populus Rhizosphere	VLLTRCAWHPRYHGYPLVEGVVSWGGWGVKFTDGICADCAARFRAEHRAFLERRR
Ga0075418_1000849510	3300009100	Populus Rhizosphere	MNRGTSIALTCGGRREVPVLLTRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICSDCAARFRAEHRAFLERRRDEAVRQRDLERHVA*
Ga0066709_1030626801	3300009137	Grasslands Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRAPKRETPRRVA*
Ga0114129_106378582	3300009147	Populus Rhizosphere	VTVLISRCAWHPRYHGYPLVDGVASWSGWGVKFTDGICADCAARFRDEYRAFFERRRVEDTHRAEARRQVA*
Ga0114129_127046031	3300009147	Populus Rhizosphere	VLLRRCAWHPRYLGYQLVEGVASWSGWGVKFTDGICAGCTVRFRDEHRAFLERRRRESAREAESQRQVA*
Ga0126374_100746183	3300009792	Tropical Forest Soil	VLLTGCAWHPRYHGYPLVEGVVSWSGWGVKFTDGICADCAARFRAEHRAFLERRRPVGPREREAERQVA*
Ga0105088_10200453	3300009810	Groundwater Sand	RRNERWEVLVLLSRCAWHPRYFGYALVEGVVSWGGWGLKFTDGICPECATRFRAEYRAFIKRRDPTRALEAERQVA*
Ga0126384_100049056	3300010046	Tropical Forest Soil	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCIARFRDEHRAFLERHRRVEAAQKIEGERQVA*
Ga0126384_119745761	3300010046	Tropical Forest Soil	IAARRTHREVAVLLTGCAWHPRYHGYPLVEGVVSWSGWGVKFTDGICADCAARFRAEHRAFLERSRPDAPREREAERQVA*
Ga0127459_11708391	3300010133	Grasslands Soil	EVPVLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0127499_12024161	3300010141	Grasslands Soil	REVPVLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0134109_102804771	3300010320	Grasslands Soil	HPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0134071_100012463	3300010336	Grasslands Soil	MLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCAARLRAEYQAFFERRRLEEAREVQRHVA*
Ga0134071_105608852	3300010336	Grasslands Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDENRAFFERRRLDDTHGSEVRRQVA*
Ga0126376_100302653	3300010359	Tropical Forest Soil	MLLTRCAWHPRYHGYPLVEGVVSWSGWGVKFTDGICADCAARFRAEHRAFLERRRPDAPREREAERQVA*
Ga0126372_121676503	3300010360	Tropical Forest Soil	AWHPRYHGYPLVEGVASWSGWGLKFTDGICADCAARFRAEHRAFLERRRAEGVRKHDLERRVA*
Ga0137392_108940891	3300011269	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRKPERETPRRVA*
Ga0137399_104706442	3300012203	Vadose Zone Soil	VLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVRRFRAEYRDFIERREPERATPRRVA*
Ga0137399_105280572	3300012203	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIGRRAPERATPRRVA*
Ga0137399_109217731	3300012203	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRAEYRAFIERRDTGRELELEPERHVA*
Ga0137399_109443911	3300012203	Vadose Zone Soil	LSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRKPERETPRRVA*
Ga0137399_109639701	3300012203	Vadose Zone Soil	MRNERWEVPVLLRRCAWHPRYFGYPLIGGITSWAGWSLKFTDGICPECATRFRAEYRAFFERRRLKAGHDLEAQRQVA*
Ga0137399_113626491	3300012203	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRAEYRAFIERRDPERELETQRHVA*
Ga0137376_108618842	3300012208	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIDRRAPKRETPRRVA*
Ga0137370_104680441	3300012285	Vadose Zone Soil	MRSASGRDRNAHEARHIRCSGLTPSNHWEVRVILTRCAWHPRYHGYPLVGGVASWSGWGVQFTDGICADCAERFRTEYRAFFERRRLEAQELDARRQIA*
Ga0134022_10205532	3300012371	Grasslands Soil	VPVLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0134059_11555731	3300012402	Grasslands Soil	EEIMSTHYGREVPMLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCAARLRAEYQAFFERRRLEEAREVQRHVA*
Ga0134045_10410281	3300012409	Grasslands Soil	WHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA
Ga0134060_12978901	3300012410	Grasslands Soil	VPVLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCAARLRAEYQAFFERRRLEEAREVQRHVA*
Ga0137358_100803012	3300012582	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRAEYRDFMERRKPERETPRRVA*
Ga0137358_100951653	3300012582	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPARETPHRVA*
Ga0137397_100155043	3300012685	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRAEYRDFMERREPERETPRRVA*
Ga0137397_101487482	3300012685	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECTTRFRAEYRAFIERRDTGRELEPERHVA*
Ga0137396_101786922	3300012918	Vadose Zone Soil	MRNERWEVPVLLRRCAWHPRYFGYPLIGGITSWAGWSLKFTDGICPECATRFRAEYRAFIGRREPERETPRRVA*
Ga0137394_101879362	3300012922	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECTTRFRSEYRAFIERRDTGRELEPERHVA*
Ga0137419_104890801	3300012925	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGSCPDCVLRFRAEYRDFINRRTPERETPRRVA*
Ga0137419_117332331	3300012925	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECTTRFRAEYRAFIERRDPERELETQRHVA*
Ga0137416_109136592	3300012927	Vadose Zone Soil	VLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVRRFRTEYRDFIERREPERATPRRVA*
Ga0137404_109724781	3300012929	Vadose Zone Soil	VPVNKQRREVPVLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRFRAEYQAFFERRRLEEAREVQRHVA*
Ga0137407_100300114	3300012930	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPQCATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0137407_105532302	3300012930	Vadose Zone Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRIAR
Ga0134076_100009972	3300012976	Grasslands Soil	MSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA*
Ga0134087_103910591	3300012977	Grasslands Soil	MLLSRCAWHPRYHGYPLVDGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERRQPARETPRRVA*
Ga0137405_11798891	3300015053	Vadose Zone Soil	AAACRVMNERRTGPVLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECTTRFRAEYRAFIERRDTGRELEPERHVA*
Ga0137405_14026763	3300015053	Vadose Zone Soil	MLLSRCAWHPRYFGYPLVEGVVSWSGWGLKFTDGICRECTTRFRAEYRAFIERRDTGRELELETQRHVA*
Ga0137403_108441981	3300015264	Vadose Zone Soil	VNKQRREVPVLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRFRAEYQAFFERRRLEEAREVQRHVA*
Ga0134085_100361321	3300015359	Grasslands Soil	RREVPMLITRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGPEVRRQVA*
Ga0132258_1001840410	3300015371	Arabidopsis Rhizosphere	LHPVRVVDEREGLVLLSRCAWHPRYHGYPLVAGVASWGGWGLKFTDGICADCAERFRAEYRAFFDRRRRAAPKEPEARRQIA*
Ga0132258_101156775	3300015371	Arabidopsis Rhizosphere	VLLTRCAWHPRYHGYPLVEGVVSWGGWGVKFTDGICADCAARFRAEHRAFLERRRPDRSREREAERRVA*
Ga0132257_1028160821	3300015373	Arabidopsis Rhizosphere	LHPVRVVDEREGLVLLSRCAWHPRYHGYPLVAGVASWGGWGLKFTDGICADCAERFRSEYRAFFDRRRRAAPKEPE
Ga0134112_100086703	3300017656	Grasslands Soil	MLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCAARLRAEYQAFFERRRLEEAREVQRHVA
Ga0134083_100090333	3300017659	Grasslands Soil	MLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRLRAEYQAFFERRRLEEAREVQRHVA
Ga0066655_100038885	3300018431	Grasslands Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA
Ga0066667_100147342	3300018433	Grasslands Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGPEVRRQVA
Ga0066667_102087982	3300018433	Grasslands Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPARETPRRVA
Ga0066662_116581513	3300018468	Grasslands Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICANCAVRFRDEYRAFFERRQLDDTHGPEVRRQVA
Ga0066669_100287664	3300018482	Grasslands Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRVFFERRRLDDTHGPEVRRQVA
Ga0066669_100605811	3300018482	Grasslands Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIDRRAPKRETPRRVA
Ga0179594_101080031	3300020170	Vadose Zone Soil	VLITRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICTDCATRFRAEYQAFFERRRLEEAREVQRHVA
Ga0179592_101978943	3300020199	Vadose Zone Soil	QGRMLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRTPERETPRRVA
Ga0137417_10698983	3300024330	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRTPERETPRRVA
Ga0137417_10861142	3300024330	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRTP
Ga0137417_13642013	3300024330	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERRQPERETPRRVA
Ga0207685_108487201	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICHDCVTRFRAEYRDFIERRAPARELEAPRRVA
Ga0207684_1000096132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLVLLTRCAWHPRYHGYPLVGGVASWSGWGVKFTDGICAACAVRFRDEHRAFLERRRTEAPREREPQRKVA
Ga0209350_11421591	3300026277	Grasslands Soil	VLISRCAWHPRYHGYPLVDGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGPEVRRQVA
Ga0209234_10052723	3300026295	Grasslands Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERREPERETPRRVA
Ga0209236_10055539	3300026298	Grasslands Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRAEYRAFIEWRDAGRELETRRRVA
Ga0209238_10468132	3300026301	Grasslands Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRRLDDTHGP
Ga0209153_11038012	3300026312	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDEYRAFFERRQLDDTHGPEVRRQVA
Ga0209761_10029826	3300026313	Grasslands Soil	VLLSRCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRAEYRAFIEWRDTGRELETRRRVA
Ga0209761_10972382	3300026313	Grasslands Soil	VLVSRCAWHPRYFGYPLIGGIASWAGWSLKFTDGICPECASRFRTEYRAFIERRRLEAGHDLETQRQIA
Ga0209686_10596272	3300026315	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRTEYRDFIERRQPARETPRRVA
Ga0209155_10327322	3300026316	Soil	VLISRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCAVRFRDENRAFFERRRLDDTHGPEVRRQVA
Ga0209808_12109812	3300026523	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRQ
Ga0209806_10065004	3300026529	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRAEYRDFIDRRAPKRGTPRRVA
Ga0209807_12136503	3300026530	Soil	RCAWHPRYFGYPLVEGVVSWSGWGLRFTDGICPECATRFRSEYRAFLERRDTGRELETRRRAA
Ga0209161_100162707	3300026548	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRQPARETPRRVA
Ga0209474_103496602	3300026550	Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPACVIRFRTEYRDFIERRAPKRETPRRVA
Ga0209648_100563472	3300026551	Grasslands Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVIRFRAEYREFIERREPERETPRRVA
Ga0209588_10643843	3300027671	Vadose Zone Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICPDCVLRFRAEYRDFINRRKPERETPRRVA
Ga0209814_100006284	3300027873	Populus Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCTARFRDEHRAFLERRRRESAREIESQRQVA
Ga0209814_100143143	3300027873	Populus Rhizosphere	VWRTHGEVPVLLTRCAWHPRYHGYPLVEGVVSWGGWGVKFTDGICADCAARFRAEHRAFLERRRPDQSREREAERQVA
Ga0209814_100521392	3300027873	Populus Rhizosphere	VLLSRCAWHPRYHGYPLVEGVASWSGWGVKFTDGICADCATRFRAELRAFGERRRLEAAREVEAQQQVA
Ga0209481_100216383	3300027880	Populus Rhizosphere	VLLTRCAWHPRYHGYPLVEGVASWSGWGLKFTDGICSDCAARFRAEHRAFLERRRDEAVRQRDLERHVA
Ga0137415_104518932	3300028536	Vadose Zone Soil	VLLSRCAWHPRYFGYPLVGGVVSWSGWGLRFTDGICPECATRFRAEYRAFIERRDPERELETQRHVA
Ga0310813_111657101	3300031716	Soil	MRVVDEREGFVLLSRCAWHPRYHGYPLVAGVASWGGWGLKFTDGICADCAERFRAEYRAFFDR
Ga0307469_120460231	3300031720	Hardwood Forest Soil	VLLTRCAWHPRYHGYPLVGGVASWSGWGVKFTDGICAACAVRFRDEHRAFLERRRTEAPRER
Ga0307471_1000019304	3300032180	Hardwood Forest Soil	VPVLLTRCAWHPRYHGYPLVGGVASWSGWGVKFTDGICAACAVRFRDEHRAFLERRRTEAPREREPQRKVA
Ga0307471_1001336323	3300032180	Hardwood Forest Soil	MLLSRCAWHPRYHGYPLVEGVVSWAGWGLKFTDGICHDCVIRFRAEYRDFIERREPARELETPRRVA
Ga0310812_101546262	3300032421	Soil	MRVVDEREGFVLLSRCAWHPRYHGYPLVAGVASWGGWGLKFTDGICADCAERFRAEYRAFFDRRRRAATKEPEARRQIA
Ga0310811_103342412	3300033475	Soil	VLLSRCAWHPRYHGYPLVAGVASWGGWGLKFTDGICADCAERFRAEYRAFFDRRRRAATKEPEARRQIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences