Metagenome / Metatranscriptome Family F060793

Basic Information
Family ID	F060793
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	63 residues
Representative Sequence	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Number of Associated Samples	107
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.21 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (53.030 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.606 % of family members)
Environment Ontology (ENVO)	Unclassified (25.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.970 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.78% β-sheet: 0.00% Coil/Unstructured: 42.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00528	BPD_transp_1	6.82
PF00563	EAL	5.30
PF12802	MarR_2	2.27
PF01936	NYN	1.52
PF00005	ABC_tran	1.52
PF02518	HATPase_c	1.52
PF14588	YjgF_endoribonc	0.76
PF03466	LysR_substrate	0.76
PF11953	DUF3470	0.76
PF01507	PAPS_reduct	0.76
PF08386	Abhydrolase_4	0.76
PF12697	Abhydrolase_6	0.76
PF08240	ADH_N	0.76
PF13683	rve_3	0.76
PF13751	DDE_Tnp_1_6	0.76
PF17158	MASE4	0.76
PF00440	TetR_N	0.76
PF05598	DUF772	0.76
PF01197	Ribosomal_L31	0.76
PF04055	Radical_SAM	0.76
PF01734	Patatin	0.76
PF01979	Amidohydro_1	0.76
PF08666	SAF	0.76
PF04392	ABC_sub_bind	0.76
PF10098	DUF2336	0.76
PF13356	Arm-DNA-bind_3	0.76
PF03401	TctC	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	5.30
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	5.30
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	5.30
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	5.30
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	1.52
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.76
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.76
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.03 %
Unclassified	root	N/A	46.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.03 %
Unclassified	root	N/A	46.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.03 %
Unclassified	root	N/A	46.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.18 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	38.64 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	32.58 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	21.21 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.79 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.97 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	2.27 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	0.76 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.76 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_17014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	867	Open in IMG/M
3300002568\|C688J35102_118495019	Not Available	565	Open in IMG/M
3300003320\|rootH2_10183647	All Organisms → cellular organisms → Bacteria → Proteobacteria	2005	Open in IMG/M
3300004081\|Ga0063454_100093260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1405	Open in IMG/M
3300004092\|Ga0062389_101853371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	782	Open in IMG/M
3300004114\|Ga0062593_101806875	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004153\|Ga0063455_100595558	Not Available	718	Open in IMG/M
3300005184\|Ga0066671_10677867	Not Available	668	Open in IMG/M
3300005327\|Ga0070658_10524897	Not Available	1024	Open in IMG/M
3300005329\|Ga0070683_100072455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	3215	Open in IMG/M
3300005332\|Ga0066388_102271557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	981	Open in IMG/M
3300005336\|Ga0070680_100226494	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005336\|Ga0070680_100611454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	936	Open in IMG/M
3300005336\|Ga0070680_101580265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300005339\|Ga0070660_100912702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	741	Open in IMG/M
3300005340\|Ga0070689_100162805	All Organisms → cellular organisms → Bacteria → Proteobacteria	1804	Open in IMG/M
3300005341\|Ga0070691_10300389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	877	Open in IMG/M
3300005363\|Ga0008090_14684428	Not Available	816	Open in IMG/M
3300005434\|Ga0070709_10020491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3836	Open in IMG/M
3300005434\|Ga0070709_11060026	Not Available	647	Open in IMG/M
3300005458\|Ga0070681_10249711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1687	Open in IMG/M
3300005459\|Ga0068867_102366254	Not Available	505	Open in IMG/M
3300005511\|Ga0077121_10028868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6445	Open in IMG/M
3300005529\|Ga0070741_11016130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300005529\|Ga0070741_11536167	Not Available	548	Open in IMG/M
3300005530\|Ga0070679_100804725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	883	Open in IMG/M
3300005533\|Ga0070734_10632518	Not Available	609	Open in IMG/M
3300005533\|Ga0070734_10864283	Not Available	513	Open in IMG/M
3300005535\|Ga0070684_100056405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3428	Open in IMG/M
3300005537\|Ga0070730_10000385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	52891	Open in IMG/M
3300005537\|Ga0070730_10754418	Not Available	615	Open in IMG/M
3300005548\|Ga0070665_100085308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3163	Open in IMG/M
3300005617\|Ga0068859_100664675	Not Available	1133	Open in IMG/M
3300005844\|Ga0068862_100388289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1303	Open in IMG/M
3300005950\|Ga0066787_10060471	Not Available	746	Open in IMG/M
3300005983\|Ga0081540_1044764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2256	Open in IMG/M
3300005994\|Ga0066789_10257671	Not Available	731	Open in IMG/M
3300006755\|Ga0079222_11400452	Not Available	647	Open in IMG/M
3300006804\|Ga0079221_10593756	Not Available	745	Open in IMG/M
3300006804\|Ga0079221_10844038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	663	Open in IMG/M
3300006954\|Ga0079219_11803940	Not Available	572	Open in IMG/M
3300009093\|Ga0105240_10750656	Not Available	1061	Open in IMG/M
3300009093\|Ga0105240_11497266	Not Available	708	Open in IMG/M
3300009101\|Ga0105247_10779850	Not Available	727	Open in IMG/M
3300009101\|Ga0105247_11506732	Not Available	549	Open in IMG/M
3300009174\|Ga0105241_10113295	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300009174\|Ga0105241_11138788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	736	Open in IMG/M
3300009174\|Ga0105241_12270321	Not Available	539	Open in IMG/M
3300009545\|Ga0105237_10360305	Not Available	1458	Open in IMG/M
3300009545\|Ga0105237_11722508	Not Available	634	Open in IMG/M
3300009551\|Ga0105238_10071906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	3456	Open in IMG/M
3300010043\|Ga0126380_10177993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1398	Open in IMG/M
3300010043\|Ga0126380_11913959	Not Available	540	Open in IMG/M
3300010046\|Ga0126384_12172131	Not Available	534	Open in IMG/M
3300010048\|Ga0126373_11905969	Not Available	657	Open in IMG/M
3300010048\|Ga0126373_13112106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	517	Open in IMG/M
3300010358\|Ga0126370_11232477	Not Available	697	Open in IMG/M
3300010366\|Ga0126379_12814569	Not Available	582	Open in IMG/M
3300010371\|Ga0134125_10007300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12468	Open in IMG/M
3300010371\|Ga0134125_10121124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2913	Open in IMG/M
3300010400\|Ga0134122_10957223	Not Available	834	Open in IMG/M
3300010401\|Ga0134121_11069958	Not Available	797	Open in IMG/M
3300010401\|Ga0134121_12822276	Not Available	532	Open in IMG/M
3300010868\|Ga0124844_1120028	Not Available	1003	Open in IMG/M
3300010868\|Ga0124844_1175129	Not Available	797	Open in IMG/M
3300010868\|Ga0124844_1263859	Not Available	598	Open in IMG/M
3300012513\|Ga0157326_1096119	Not Available	505	Open in IMG/M
3300014968\|Ga0157379_11597804	Not Available	636	Open in IMG/M
3300015371\|Ga0132258_13555526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1066	Open in IMG/M
3300015373\|Ga0132257_103249449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	592	Open in IMG/M
3300016294\|Ga0182041_10131185	Not Available	1900	Open in IMG/M
3300016387\|Ga0182040_10524161	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300016422\|Ga0182039_10986497	Not Available	755	Open in IMG/M
3300016445\|Ga0182038_11649340	Not Available	577	Open in IMG/M
3300017792\|Ga0163161_10907843	Not Available	747	Open in IMG/M
3300018000\|Ga0184604_10271336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	596	Open in IMG/M
3300018066\|Ga0184617_1281120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300020579\|Ga0210407_10530779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	919	Open in IMG/M
3300021374\|Ga0213881_10032528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2186	Open in IMG/M
3300021401\|Ga0210393_11001196	Not Available	676	Open in IMG/M
3300021401\|Ga0210393_11234490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300021406\|Ga0210386_11325740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	605	Open in IMG/M
3300021407\|Ga0210383_11670683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	522	Open in IMG/M
3300021475\|Ga0210392_11153692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	580	Open in IMG/M
3300021475\|Ga0210392_11509755	Not Available	502	Open in IMG/M
3300025297\|Ga0209758_1008720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6482	Open in IMG/M
3300025905\|Ga0207685_10620320	Not Available	582	Open in IMG/M
3300025911\|Ga0207654_11213227	Not Available	550	Open in IMG/M
3300025912\|Ga0207707_10039738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	4112	Open in IMG/M
3300025913\|Ga0207695_11426531	Not Available	573	Open in IMG/M
3300025917\|Ga0207660_11139018	Not Available	635	Open in IMG/M
3300025917\|Ga0207660_11438578	Not Available	558	Open in IMG/M
3300025921\|Ga0207652_10187325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1861	Open in IMG/M
3300025921\|Ga0207652_11171039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	670	Open in IMG/M
3300025924\|Ga0207694_10354844	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300025939\|Ga0207665_10229533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1364	Open in IMG/M
3300025944\|Ga0207661_10005278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9096	Open in IMG/M
3300025961\|Ga0207712_11082078	Not Available	713	Open in IMG/M
3300026041\|Ga0207639_12105568	Not Available	525	Open in IMG/M
3300026215\|Ga0209849_1011026	All Organisms → cellular organisms → Bacteria → Acidobacteria	1475	Open in IMG/M
3300026217\|Ga0209871_1022344	Not Available	1179	Open in IMG/M
3300026291\|Ga0209890_10178650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	691	Open in IMG/M
3300027310\|Ga0207983_1033642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300027725\|Ga0209178_1208527	Not Available	694	Open in IMG/M
3300027826\|Ga0209060_10412230	Not Available	614	Open in IMG/M
3300027857\|Ga0209166_10000063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	144329	Open in IMG/M
3300028778\|Ga0307288_10140394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300031231\|Ga0170824_111865051	Not Available	575	Open in IMG/M
3300031507\|Ga0307509_10556419	Not Available	824	Open in IMG/M
3300031564\|Ga0318573_10423432	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300031682\|Ga0318560_10253261	Not Available	946	Open in IMG/M
3300031736\|Ga0318501_10544854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031897\|Ga0318520_10419727	Not Available	819	Open in IMG/M
3300031912\|Ga0306921_10495856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300031912\|Ga0306921_10937948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300032001\|Ga0306922_10347569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1591	Open in IMG/M
3300032042\|Ga0318545_10348573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300032051\|Ga0318532_10321611	Not Available	549	Open in IMG/M
3300032261\|Ga0306920_100414165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2003	Open in IMG/M
3300032261\|Ga0306920_101071862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300032770\|Ga0335085_10086759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4089	Open in IMG/M
3300032782\|Ga0335082_11568506	Not Available	531	Open in IMG/M
3300032782\|Ga0335082_11625961	Not Available	519	Open in IMG/M
3300032783\|Ga0335079_10362860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1569	Open in IMG/M
3300032805\|Ga0335078_10268201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2317	Open in IMG/M
3300032896\|Ga0335075_10513202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1220	Open in IMG/M
3300032954\|Ga0335083_10397907	Not Available	1178	Open in IMG/M
3300032955\|Ga0335076_10174493	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300033004\|Ga0335084_10144322	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300033289\|Ga0310914_11174180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300033475\|Ga0310811_10325655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1746	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.52%
Host-Associated	Host-Associated	23.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.24%
Plants	Host-Associated → Plants	23.48%
Aquatic	Environmental → Aquatic	2.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Sediment	Environmental → Aquatic → Sediment	1.52%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%
Roots	Host-Associated → Plants → Roots	0.76%
Rhizome	Host-Associated → Plants → Rhizome	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.18%
Loam	Environmental → Terrestrial → Soil → Loam	19.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.06%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.76%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025297	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02865900	2199352025	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
C688J35102_1184950192	3300002568	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSAD
rootH2_101836472	3300003320	Sugarcane Root And Bulk Soil	MIAKNHIRAARYRALALTETDPARANLLDRLAEEAEHGVLCTVRHLRLVHAAEDVAPATVAA*
Ga0063454_1000932602	3300004081	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAEAKAAA*
Ga0062389_1018533711	3300004092	Bog Forest Soil	RALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADGAAGAKAA*
Ga0062593_1018068752	3300004114	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA*
Ga0063455_1005955581	3300004153	Soil	TMIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAEAKAAA*
Ga0066671_106778671	3300005184	Soil	MIARNHIRAARYRALASTEKDQARATLLDRLAEEAEHGVLCTVRHLRLVHSVEMTTPSCATGGDPDSA*
Ga0070658_105248972	3300005327	Corn Rhizosphere	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAAAKAA*
Ga0070683_1000724554	3300005329	Corn Rhizosphere	MLVVNHIRAARYRVLALVEEDQARAALLRRIAKEADHGVLCTVRHLRLVHCAGETAPEQDSTPATSVAA*
Ga0066388_1022715571	3300005332	Tropical Forest Soil	MLTKNRIRAARYRALALTEQYQARANLLDRLAEEAEHGVLFTVRHLRLVHSVETETPAPSAA*
Ga0070680_1002264943	3300005336	Corn Rhizosphere	MIARNHIRAARYRALASTEKDQARATLLDRLAEEAEHGVLCTVRHLRLVYSVETTAAAPSTT*
Ga0070680_1006114541	3300005336	Corn Rhizosphere	AARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS
Ga0070680_1015802651	3300005336	Corn Rhizosphere	MLVVNHIRAARYRALALVEKDQARAALLGRIAKEADHGVLCTVRHLRLVHCAAETAP
Ga0070660_1009127022	3300005339	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS*
Ga0070689_1001628052	3300005340	Switchgrass Rhizosphere	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDVAGAKAA*
Ga0070691_103003892	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIARNHIRAARYRALALTEKDRARASLLDRLAEEAEHGVLCTVRHLRLVYSVETTAAAPSTT*
Ga0008090_146844282	3300005363	Tropical Rainforest Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAARAKAA*
Ga0070709_100204916	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLAKNYIRAARYRALALTEKYKARANLLDRLAAEAEHGVLCTVRHLRLVHSAEVTLVPSDAQLKAAV*
Ga0070709_110600261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIARNHIRAARYRALASTEKDQARATLLDRLAEEAEHGVLCTVRHLRLVYSVETPAPAPSTT*
Ga0070681_102497112	3300005458	Corn Rhizosphere	MLVVNHIRAARYRALALVEKDQARAALLGRIAKEADHGVLCTVRHLRLVHCAAETAPEQDLTPATSVAA*
Ga0068867_1023662541	3300005459	Miscanthus Rhizosphere	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAA
Ga0077121_100288683	3300005511	Arabidopsis Rhizosphere	MIARNHIRAARYRALALTETDQERANLLDRLAAEAEHGVLCTLRHHLRLVYSADEAVCAKAA*
Ga0070741_110161302	3300005529	Surface Soil	MIAKNHIRAARYRALALTETDQARANLLDRLAEEAEHGVLCTVRHLRLVHAAETAAPAAAAA*
Ga0070741_115361671	3300005529	Surface Soil	MLTRNHIRAARYRALALVEKNEAYAALLGRIADEADHGVLCTVRHLRLVHCVEAAEAATASAAA*
Ga0070679_1008047252	3300005530	Corn Rhizosphere	ARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS*
Ga0070734_106325181	3300005533	Surface Soil	MIAKNYIRAARYRALALTEKYKARANLLDRLAEEAEHGVLCTVRHLRLVQVDETAAPAVAA*
Ga0070734_108642831	3300005533	Surface Soil	RQKSEDLKRRRRTMLAKNYIRAARYRALALTEKYKARANLLDRLAKEAEHGVLCTVRHLRLVHCAEAMLAPALEAGDEFVNVS*
Ga0070684_1000564052	3300005535	Corn Rhizosphere	MLVVNHIRAARYRVLALVEEDQARAALLGRIAKEADHGVLCTVRHLRLVHCAGETAPEQDSTPATSVAA*
Ga0070730_1000038510	3300005537	Surface Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAGEAEHGVLCTISHLRLVYSVETTTPAPSLEV*
Ga0070730_107544181	3300005537	Surface Soil	MLVINHLRAARYRALALVEKDLTRAALLGRIAKEADHGVLCTVRHLRLVHCAEEAAPAQAPAAATSVAA*
Ga0070665_1000853085	3300005548	Switchgrass Rhizosphere	MIARNHIRAARYRALALTETDQERANLLGRLAAEAEHGVLCTLRHHLRLVYCADEAIGAKAA*
Ga0068859_1006646751	3300005617	Switchgrass Rhizosphere	IRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAAAKAA*
Ga0068862_1003882891	3300005844	Switchgrass Rhizosphere	IRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA*
Ga0066787_100604711	3300005950	Soil	MIAKNYIRAARYRALALTEKYQARANLLDRLAEEAERGVLCTVRHLRLAQHDAEATAPALAA*
Ga0081540_10447641	3300005983	Tabebuia Heterophylla Rhizosphere	MIARNHIRAARYRALALTEKDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADEAAAAKTA*
Ga0066789_102576712	3300005994	Soil	MIAKNYIRAARYRALALTEKYQARANLLDRLAEEAERGVLCTVRHLRLVHDAEATAPALAA*
Ga0079222_114004521	3300006755	Agricultural Soil	MLAKNYIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVHSAEAPLAPALDAEDQFVNLA*
Ga0079221_105937562	3300006804	Agricultural Soil	MLAKNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEATLAPALDDKDEFVNFA*
Ga0079221_108440382	3300006804	Agricultural Soil	MIARNHIRAARYRALALTEKDRARANLLDRLAEEAEHGVLCTVRHLRLVHSVEAVAAAAPSTDASDAFNSAI
Ga0079219_118039402	3300006954	Agricultural Soil	MLAKNYIRAARYRALALTEKYKARANLLDRLAAEAEHGVLCTVRHLRLVHSAEATLAPSDARLKVAV*
Ga0105240_107506562	3300009093	Corn Rhizosphere	MMLVVNHIRAARYRALALVEKDQARAALLGRIAKEADHGVLCTVRHLRLVHCAAETAPEQDLTPATSVAA*
Ga0105240_114972661	3300009093	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVNSAEMTAPTPSDERLQAAS*
Ga0105247_107798502	3300009101	Switchgrass Rhizosphere	MIARNHIRAARYRALARTEMDQARANMLDRLAIEAEHCVLCTLKNHLRLVHSVETEVPALDINDALGAGQLT*
Ga0105247_115067322	3300009101	Switchgrass Rhizosphere	RALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAACAEAA*
Ga0105241_101132953	3300009174	Corn Rhizosphere	MIARNHIRAARYRALALTETDPARANLLDRLAAEAEHGVLCILQHHLRLVHSADDAAGTTAT*
Ga0105241_111387882	3300009174	Corn Rhizosphere	MIARNHIRAARYRALALTEKYKARANLLDRLAAEAEHGVLCTVRHLRLVHSAEVTLVPSDAQLKAAV*
Ga0105241_122703211	3300009174	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVHSAEVTLVPSDAQLKAA
Ga0105237_103603053	3300009545	Corn Rhizosphere	MIARNHIRAARYRALALTETDPARANLLDRLAAEAEHGVLCILQHHLRLVHSADDAAGTKAT*
Ga0105237_117225081	3300009545	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEVTLAPTPSDERLQAAS*
Ga0105238_100719062	3300009551	Corn Rhizosphere	MIAKNYIRAARYRALALTEKYQARANLLVRLAEEAEHGVLCTVRHLRLVQVDETAAPAVAA*
Ga0126380_101779932	3300010043	Tropical Forest Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAEAA*
Ga0126380_119139591	3300010043	Tropical Forest Soil	MLAKNYIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEATLAPSEDQLEAAI*
Ga0126384_121721311	3300010046	Tropical Forest Soil	MIARNHIRAARYRALALTETGQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDA
Ga0126373_119059692	3300010048	Tropical Forest Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDTADAKAA*
Ga0126373_131121061	3300010048	Tropical Forest Soil	MIARNHIRAARYRALALTEKDQARASLLDRLAGEAEHGVLCTVRHLRLVYSAETATPAPTGDTGDN
Ga0126370_112324771	3300010358	Tropical Forest Soil	MLAKNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEATLVPTDAQLEAAV*
Ga0126376_110502442	3300010359	Tropical Forest Soil	MIAKNYIRAARYRALALTEKYQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEATLAPVLDDKDEFVNLA*
Ga0126379_128145691	3300010366	Tropical Forest Soil	MLAKNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEATLAPALDDKDEFVNLA*
Ga0134125_100073007	3300010371	Terrestrial Soil	MIAKNHIRAARYRALALTEKDQARANLLDRLAEEAEHGLLCTISHLRLVHSAETAPPAPSLEA*
Ga0134125_101211243	3300010371	Terrestrial Soil	RAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA*
Ga0134122_109572232	3300010400	Terrestrial Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADETAGAKAA*
Ga0134121_110699582	3300010401	Terrestrial Soil	MIARNHIRAARYRALASTEKDQARATLLDRLAEEAEHGVLCTVRHLRLVQVDETAAPAVAA*
Ga0134121_128222762	3300010401	Terrestrial Soil	MIARNHIRAARYRALARTEMDQARANLLDRLAIEAEHGVLCTLKNHLRLVHSVETAVPALDINDALGAGQLT*
Ga0124844_11200281	3300010868	Tropical Forest Soil	LREITSALPAIAIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAEAA*
Ga0124844_11751291	3300010868	Tropical Forest Soil	MIARNHIRAARYRGYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA*
Ga0124844_12638591	3300010868	Tropical Forest Soil	MIARNHIRAARYRGAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAEAA*
Ga0157326_10961192	3300012513	Arabidopsis Rhizosphere	MIARNHIRAARYRALALIEKDQARANLLDRLAGEAEHGLLCTVRHLRLVYSVEATTPAPAAIQA*
Ga0157379_115978041	3300014968	Switchgrass Rhizosphere	HIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA*
Ga0132258_135555262	3300015371	Arabidopsis Rhizosphere	MIARNHIRAARYRALARTEMDQARANLLDRLAIEAEHGVLCTLKNHLRLVHSVETEVPALDINDALGAGQLT*
Ga0132257_1032494491	3300015373	Arabidopsis Rhizosphere	AARYRALALTEKYRARANLLDRLAAEAEHGVLCTVRHLRLVHSAEATLVPTDAQLEAAV*
Ga0182041_101311851	3300016294	Soil	MIARNHIRAARYRALALTEAYQARANLLDRLAAEAEHSVLCTPRHHLRLVYSADDAARAKAA
Ga0182040_105241612	3300016387	Soil	MLVVNHIRAARYRALALLEKDQRRAALLGRIAKEADHGVLCTVWHLRLVNCAEEAAPEQAAAPATSVAA
Ga0182039_109864971	3300016422	Soil	TMIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0182038_116493401	3300016445	Soil	MIARNHIRAARYRALALTEADQARANLLDRLAAEAEHSVLCTPRHHLRLVYSADDAARAKAA
Ga0163161_109078431	3300017792	Switchgrass Rhizosphere	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAAAKAA
Ga0184604_102713361	3300018000	Groundwater Sediment	MIARNHIRAARYRALVLTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0184617_12811201	3300018066	Groundwater Sediment	MIARNHIRAARYRALVLTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAA
Ga0210407_105307792	3300020579	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGDKAA
Ga0213881_100325281	3300021374	Exposed Rock	MIARNHIRAARYRALALTEKDQARANLLDRLAGEAEHGVLCTVRHLRLVHSAEAAPPAPSLDT
Ga0210393_110011962	3300021401	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGDK
Ga0210393_112344901	3300021401	Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSTEIATPAPSPDAGG
Ga0210386_113257401	3300021406	Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSTEIATP
Ga0210383_116706831	3300021407	Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSTEIATPAPSPDAGGEF
Ga0210392_111536922	3300021475	Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAGEAEHGVLCTVGHLRLVYSAEGATLAPSIDA
Ga0210392_115097551	3300021475	Soil	MIARNHIRAARYRALALTETDPARANLLDRLAAEAEHGVLCTLQHHLRLVHS
Ga0209758_10087203	3300025297	Arabidopsis Rhizosphere	MIARNHIRAARYRALALTETDQERANLLDRLAAEAEHGVLCTLRHHLRLVYSADEAVCAKAA
Ga0207685_106203202	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIAINHIRAARYRALALNEKDQARAALLGRIAEEADHGLLCTVRHLHLIYSIETT
Ga0207654_112132272	3300025911	Corn Rhizosphere	MIARNHIRAARYRALASTEKDQARATLLDRLAEEAEHGVLCTVRHLRLVYSVETTAAAPSTT
Ga0207707_100397381	3300025912	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS
Ga0207695_114265311	3300025913	Corn Rhizosphere	HQMDQTDLKHRRRVMLVVNHIRAARYRVLALVEEDQARAALLRRIAKEADHGVLCTVRHLRLVHCAEETAPEQDSTPATSVAA
Ga0207660_111390181	3300025917	Corn Rhizosphere	QRLPGLADLTRRRRTMLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS
Ga0207660_114385781	3300025917	Corn Rhizosphere	MLVVNHIRAARYRALALVEKDQARAALLGRIAKEADHGVLCTVRHLRLVHCAAETAPEQD
Ga0207652_101873252	3300025921	Corn Rhizosphere	MLVVNHIRAARYRALALVEKDQARAALLGRIAKEADHGVLCTVRHLRLVHCAAETAPEQDLTPATSVAA
Ga0207652_111710392	3300025921	Corn Rhizosphere	RTMLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQAAS
Ga0207694_103548442	3300025924	Corn Rhizosphere	MIARNHIRAARYRALALTETDPARANLLDRLAAEAEHGVLCILQHHLRLVHSADDAAGTTAT
Ga0207665_102295331	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIARNHIRAARYRALALTEKYKARANLLDRLAAEAEHGVLCTVRHLRLVHSAEVTLVPSDAQLKAAV
Ga0207661_100052783	3300025944	Corn Rhizosphere	MLVVNHIRAARYRALALVEEDQARAALLGRIAKEADHGVLCTVRHLRLVHCAGETAPEQDSTPATSVAA
Ga0207712_110820782	3300025961	Switchgrass Rhizosphere	RYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0207639_121055681	3300026041	Corn Rhizosphere	MLARNRIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVYSAEMTAPTPSDERLQTAN
Ga0209849_10110262	3300026215	Soil	MIAKNYIRAARYRALALTETDPARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0209871_10223441	3300026217	Permafrost Soil	MIAKNYIRAARYRALALTEKYQARANLLDRLAEEAERGVLCTVRHLRLAQHDAEATAPALAA
Ga0209890_101786501	3300026291	Soil	RRRTMIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0207983_10336421	3300027310	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKSA
Ga0209178_12085271	3300027725	Agricultural Soil	MLAKNYIRAARYRALALTEKYQARANLLDRLAAEAEHGVLCTVRHLRLVHSAEAPLAPALDAEDQFVNLA
Ga0209060_104122301	3300027826	Surface Soil	MIAKNYIRAARYRALALTEKYKARANLLDRLAEEAEHGVLCTVRHLRLVQVDETAAPAVA
Ga0209166_1000006361	3300027857	Surface Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAGEAEHGVLCTISHLRLVYSVETTTPAPSLEV
Ga0307288_101403941	3300028778	Soil	IRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0170824_1118650512	3300031231	Forest Soil	MPAINHIRAARYRALALVEKDQARAALLGRLADEADHGVLCTVRHLHLVFNIEA
Ga0307509_105564191	3300031507	Ectomycorrhiza	MIAKNYIRAARYRALALTEKYQARANLLDRLAEEAERGVLCTVRHLRLVHDAEATAPALA
Ga0318573_104234322	3300031564	Soil	MIAKNHIRAARYRALALTEKYQARANLLDRLAEEAEHGVLCTVRHLRLVHVAETVQPAAVAA
Ga0318560_102532612	3300031682	Soil	MLVVNHIRAARYRALALLEKDQRRAALLGRIAKEADHGVLCTVRHLRLVHCAEEAAPEQAAAPATSVAA
Ga0318501_105448542	3300031736	Soil	MIARNRIRAARYRALALTEQYQARANLLDRLADEAEHGVLCTVRHLRLVHSAETTAALAHEG
Ga0318520_104197272	3300031897	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHSVLCTLRHHLRLVYSADDAAGAKAA
Ga0306921_104958563	3300031912	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADD
Ga0306921_109379482	3300031912	Soil	MLVVNHIRAARYRALALLEKDQRRAALLGRIAKEADHGVLCTVRHLRLVHCAEEAAPEQAAA
Ga0306922_103475692	3300032001	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDTAGAKAA
Ga0318545_103485731	3300032042	Soil	IARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAARAKA
Ga0318532_103216112	3300032051	Soil	MIARNHIRAARYRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAARAKAA
Ga0306920_1004141653	3300032261	Soil	MIARNHIRAARYRALALTETDRARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAARAKAA
Ga0306920_1010718621	3300032261	Soil	MLVVNHIRAARYRALALLEKDQRRAALLGRIAKEADHGVLCTVRHLRLVHCAEEAAPEQAAAPAT
Ga0335085_100867593	3300032770	Soil	MIARNHIRAARYRALALTETDQAKANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0335082_115685061	3300032782	Soil	MIARNHIRAARYRALALTETDRARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0335082_116259612	3300032782	Soil	MIAKNYIRAARYRALALTEKYKARANLLDRLAEEAEHGVLCTVRHLRLVQVDETAAPAVVAA
Ga0335079_103628602	3300032783	Soil	MLTKNHIRAARYRALAQVETDQARAALLDRLADEADHGLLCSVRHLRLVYDIETETDEQPATLN
Ga0335078_102682014	3300032805	Soil	MPAINHIRAARYRALAQVETDQGRAALLGRLAAEADHGVLCAVRHLRLVHNTEAAADERVNLS
Ga0335075_105132022	3300032896	Soil	MLTKNHIRAARYRALALVEPDQARAALLERLAEEASHGLLCSPRHLRLVYDIETEEQPPALN
Ga0335083_103979071	3300032954	Soil	MIARNHIRAARYRALALTETDQAKANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAG
Ga0335076_101744933	3300032955	Soil	MIARNHIRAARYRALALTETDPARANLLDRLAAEAEHGVLCTLQHHLRLVHSADDAAGTKAT
Ga0335084_101443223	3300033004	Soil	MIAKNYIRAARYRALALTEKYKARANLLDRLAEEAEHGVLCTVRHLRLVQVDETAAPAAVAA
Ga0310914_111741802	3300033289	Soil	YRALALTETDQARANLLDRLAAEAEHGVLCTLRHHLRLVYSADDAAGAKAA
Ga0310811_103256553	3300033475	Soil	MIARNHIRAARYRALALTEKDQARANLLDRLAEEAEHGVLCTVRHLRLVHSAEIAAPALSLEAKGEFN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060793

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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