Metagenome / Metatranscriptome Family F060791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060791
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	76 residues
Representative Sequence	LAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Number of Associated Samples	118
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.33 %
% of genes near scaffold ends (potentially truncated)	39.39 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.152 % of family members)
Environment Ontology (ENVO)	Unclassified (23.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.061 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.89% β-sheet: 0.00% Coil/Unstructured: 58.11%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF03472	Autoind_bind	56.06
PF00765	Autoind_synth	10.61
PF02219	MTHFR	2.27
PF08241	Methyltransf_11	0.76
PF14520	HHH_5	0.76
PF14572	Pribosyl_synth	0.76
PF02915	Rubrerythrin	0.76
PF09663	Amido_AtzD_TrzD	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	Transcription [K]	112.12
COG3916	N-acyl-homoserine lactone synthase LasI (autoinducer biosynthesis)	Signal transduction mechanisms [T]	21.21
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	2.27

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	53.03 %
Unclassified	root	N/A	41.67 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	53.03 %
Unclassified	root	N/A	41.67 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	53.03 %
Unclassified	root	N/A	41.67 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18401D2Y20	Not Available	515	Open in IMG/M
2170459006\|GBPF9FW01BRGOD	Not Available	500	Open in IMG/M
3300001546\|JGI12659J15293_10000635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11418	Open in IMG/M
3300001546\|JGI12659J15293_10037085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1169	Open in IMG/M
3300001593\|JGI12635J15846_10106981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1997	Open in IMG/M
3300001593\|JGI12635J15846_10517098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	702	Open in IMG/M
3300001593\|JGI12635J15846_10905840	Not Available	503	Open in IMG/M
3300001867\|JGI12627J18819_10486168	Not Available	507	Open in IMG/M
3300002245\|JGIcombinedJ26739_100233637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1729	Open in IMG/M
3300002245\|JGIcombinedJ26739_101583617	Not Available	552	Open in IMG/M
3300004082\|Ga0062384_100318346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	973	Open in IMG/M
3300004082\|Ga0062384_100642568	Not Available	724	Open in IMG/M
3300004091\|Ga0062387_101552348	Not Available	533	Open in IMG/M
3300004092\|Ga0062389_101468171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	866	Open in IMG/M
3300004152\|Ga0062386_101557914	Not Available	551	Open in IMG/M
3300004635\|Ga0062388_101482460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	685	Open in IMG/M
3300004635\|Ga0062388_101735109	Not Available	639	Open in IMG/M
3300005329\|Ga0070683_101316131	Not Available	694	Open in IMG/M
3300005339\|Ga0070660_101099560	Not Available	673	Open in IMG/M
3300005436\|Ga0070713_100514001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1131	Open in IMG/M
3300005530\|Ga0070679_101539066	Not Available	612	Open in IMG/M
3300005602\|Ga0070762_10096962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1701	Open in IMG/M
3300005610\|Ga0070763_10701035	Not Available	593	Open in IMG/M
3300005616\|Ga0068852_102460077	Not Available	541	Open in IMG/M
3300005712\|Ga0070764_10818651	Not Available	580	Open in IMG/M
3300005921\|Ga0070766_10571553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	757	Open in IMG/M
3300006050\|Ga0075028_100903280	Not Available	544	Open in IMG/M
3300006052\|Ga0075029_100193322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1267	Open in IMG/M
3300006059\|Ga0075017_100609742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	835	Open in IMG/M
3300006086\|Ga0075019_10916677	Not Available	563	Open in IMG/M
3300006755\|Ga0079222_11880670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	583	Open in IMG/M
3300006871\|Ga0075434_100955400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	871	Open in IMG/M
3300006904\|Ga0075424_101942576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	621	Open in IMG/M
3300009093\|Ga0105240_10065706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4502	Open in IMG/M
3300009633\|Ga0116129_1004859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6068	Open in IMG/M
3300009665\|Ga0116135_1258543	Not Available	678	Open in IMG/M
3300009700\|Ga0116217_10334995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	968	Open in IMG/M
3300009826\|Ga0123355_11648242	Not Available	615	Open in IMG/M
3300009839\|Ga0116223_10609845	Not Available	630	Open in IMG/M
3300010343\|Ga0074044_10325986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1009	Open in IMG/M
3300010343\|Ga0074044_11024891	Not Available	541	Open in IMG/M
3300010373\|Ga0134128_12570896	Not Available	561	Open in IMG/M
3300010396\|Ga0134126_11451443	Not Available	757	Open in IMG/M
3300011404\|Ga0153951_1055276	Not Available	700	Open in IMG/M
3300014169\|Ga0181531_10197151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1222	Open in IMG/M
3300014200\|Ga0181526_10829761	Not Available	582	Open in IMG/M
3300014655\|Ga0181516_10614421	Not Available	561	Open in IMG/M
3300014657\|Ga0181522_11020132	Not Available	513	Open in IMG/M
3300014969\|Ga0157376_10773897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	971	Open in IMG/M
3300016270\|Ga0182036_10505520	Not Available	958	Open in IMG/M
3300016294\|Ga0182041_10851141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	817	Open in IMG/M
3300016371\|Ga0182034_11200515	Not Available	660	Open in IMG/M
3300016422\|Ga0182039_12033608	Not Available	529	Open in IMG/M
3300017936\|Ga0187821_10246950	Not Available	696	Open in IMG/M
3300017946\|Ga0187879_10219772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1063	Open in IMG/M
3300017946\|Ga0187879_10468680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	698	Open in IMG/M
3300017970\|Ga0187783_10425376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	965	Open in IMG/M
3300018025\|Ga0187885_10077868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1642	Open in IMG/M
3300018034\|Ga0187863_10089923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1724	Open in IMG/M
3300018037\|Ga0187883_10146051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1219	Open in IMG/M
3300018038\|Ga0187855_10123117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1556	Open in IMG/M
3300018042\|Ga0187871_10298898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	891	Open in IMG/M
3300018046\|Ga0187851_10616578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	613	Open in IMG/M
3300020579\|Ga0210407_10154728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1768	Open in IMG/M
3300020579\|Ga0210407_10508776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	941	Open in IMG/M
3300020580\|Ga0210403_10103123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2313	Open in IMG/M
3300020582\|Ga0210395_11170810	Not Available	566	Open in IMG/M
3300021088\|Ga0210404_10720496	Not Available	569	Open in IMG/M
3300021178\|Ga0210408_10068012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2782	Open in IMG/M
3300021181\|Ga0210388_11574133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	547	Open in IMG/M
3300021401\|Ga0210393_11044510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	661	Open in IMG/M
3300021402\|Ga0210385_11446703	Not Available	525	Open in IMG/M
3300021403\|Ga0210397_10783101	Not Available	736	Open in IMG/M
3300021404\|Ga0210389_10135593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1906	Open in IMG/M
3300021405\|Ga0210387_10299927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1413	Open in IMG/M
3300021406\|Ga0210386_10508919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1040	Open in IMG/M
3300021407\|Ga0210383_10382002	Not Available	1215	Open in IMG/M
3300021444\|Ga0213878_10391024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	605	Open in IMG/M
3300021474\|Ga0210390_10609769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	915	Open in IMG/M
3300021477\|Ga0210398_10145082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1931	Open in IMG/M
3300022467\|Ga0224712_10439673	Not Available	625	Open in IMG/M
3300022530\|Ga0242658_1176342	Not Available	567	Open in IMG/M
3300022726\|Ga0242654_10256017	Not Available	629	Open in IMG/M
3300025906\|Ga0207699_10279638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1159	Open in IMG/M
3300025913\|Ga0207695_10061740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3872	Open in IMG/M
3300025914\|Ga0207671_10664790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	829	Open in IMG/M
3300025914\|Ga0207671_10968934	Not Available	671	Open in IMG/M
3300026078\|Ga0207702_11393461	Not Available	695	Open in IMG/M
3300027172\|Ga0208098_1006468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1015	Open in IMG/M
3300027505\|Ga0209218_1004816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2137	Open in IMG/M
3300027575\|Ga0209525_1143001	Not Available	550	Open in IMG/M
3300027609\|Ga0209221_1051905	Not Available	1087	Open in IMG/M
3300027619\|Ga0209330_1070455	Not Available	797	Open in IMG/M
3300027648\|Ga0209420_1079949	Not Available	945	Open in IMG/M
3300027667\|Ga0209009_1100812	Not Available	733	Open in IMG/M
3300027737\|Ga0209038_10058065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1159	Open in IMG/M
3300027812\|Ga0209656_10186420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1015	Open in IMG/M
3300027825\|Ga0209039_10324483	Not Available	603	Open in IMG/M
3300027829\|Ga0209773_10410544	Not Available	561	Open in IMG/M
3300027895\|Ga0209624_10008100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6855	Open in IMG/M
3300027908\|Ga0209006_10397535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1161	Open in IMG/M
3300027908\|Ga0209006_10942731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	690	Open in IMG/M
3300027986\|Ga0209168_10405225	Not Available	663	Open in IMG/M
3300028731\|Ga0302301_1141116	Not Available	602	Open in IMG/M
3300028775\|Ga0302231_10245300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	749	Open in IMG/M
3300028789\|Ga0302232_10108350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1418	Open in IMG/M
3300028801\|Ga0302226_10146554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1028	Open in IMG/M
3300028871\|Ga0302230_10405227	Not Available	532	Open in IMG/M
3300028906\|Ga0308309_10836317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	799	Open in IMG/M
3300030503\|Ga0311370_10688110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1203	Open in IMG/M
3300030677\|Ga0302317_10416540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	591	Open in IMG/M
3300030967\|Ga0075399_10639335	Not Available	509	Open in IMG/M
3300031057\|Ga0170834_113295002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	891	Open in IMG/M
3300031122\|Ga0170822_16925947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	684	Open in IMG/M
3300031234\|Ga0302325_12078234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	697	Open in IMG/M
3300031236\|Ga0302324_102740505	Not Available	595	Open in IMG/M
3300031446\|Ga0170820_16561319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	856	Open in IMG/M
3300031474\|Ga0170818_102619802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	622	Open in IMG/M
3300031525\|Ga0302326_11452182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	922	Open in IMG/M
3300031708\|Ga0310686_100374034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1703	Open in IMG/M
3300031708\|Ga0310686_111223344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	960	Open in IMG/M
3300031938\|Ga0308175_100086655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2842	Open in IMG/M
3300031942\|Ga0310916_11318373	Not Available	594	Open in IMG/M
3300031996\|Ga0308176_11549431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	706	Open in IMG/M
3300032892\|Ga0335081_11255992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	840	Open in IMG/M
3300032897\|Ga0335071_10930092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	817	Open in IMG/M
3300032955\|Ga0335076_10004890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	13572	Open in IMG/M
3300032955\|Ga0335076_10010411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	9372	Open in IMG/M
3300033134\|Ga0335073_10870901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	954	Open in IMG/M
3300033134\|Ga0335073_11335098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	706	Open in IMG/M
3300033829\|Ga0334854_161072	Not Available	546	Open in IMG/M
3300034163\|Ga0370515_0022395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2896	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.18%
Aquatic	Environmental → Aquatic	22.73%
Plants	Host-Associated → Plants	7.58%
Arthropoda	Host-Associated → Arthropoda	0.76%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.85%
Freshwater	Environmental → Aquatic → Freshwater	19.70%
Peat	Environmental → Terrestrial → Peat	8.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.06%
Sediment	Environmental → Aquatic → Sediment	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.82%
Loam	Environmental → Terrestrial → Soil → Loam	20.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.52%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_00922620	2124908009	Soil	MEGAMAKKLKKSASELQVTKPQVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
L01_02783290	2170459006	Grass Soil	MGGELAKKSKKSAAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
JGI12659J15293_100006356	3300001546	Forest Soil	MGGELAKKSKKSAAALIDTRQPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGI12659J15293_100370851	3300001546	Forest Soil	LAKKLKKHAPEPEDSKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGI12635J15846_101069812	3300001593	Forest Soil	MGGELAKKSKKSAAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGI12635J15846_105170982	3300001593	Forest Soil	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
JGI12635J15846_109058402	3300001593	Forest Soil	RHQTGFGGGVKYWGAGLAKKSKKSVPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGI12627J18819_104861682	3300001867	Forest Soil	MAKKLKKRASELEVTKPQVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGIcombinedJ26739_1002336373	3300002245	Forest Soil	MGGGLAKKSKKSAAALIDARRPVGALNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
JGIcombinedJ26739_1015836172	3300002245	Forest Soil	MGGGLAKKSKKSTAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0062384_1003183462	3300004082	Bog Forest Soil	LAKKSKKHAPESEEEAKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVLLGIFDVRP*
Ga0062384_1006425682	3300004082	Bog Forest Soil	MGGRLAKKSKKSAASLIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRVDPQAGWMVAHARDEVMLGIFDVKP*
Ga0062387_1015523481	3300004091	Bog Forest Soil	MGGELAKKLKKRETEPFDAKRNVGELNLSACEARRLYGICVELLELCSHVSGRIDPHAGWMVAHARDEVMLGIFDVKP*
Ga0062389_1014681712	3300004092	Bog Forest Soil	VGNQVWEGRLAKKSKKRAPEPEEAKPHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMMAHARDEVMLGIFDVRS*
Ga0062386_1015579141	3300004152	Bog Forest Soil	MFREGNQVWEGQLAKKSKKRAAEPEEAKPRVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0062388_1014824602	3300004635	Bog Forest Soil	ESSMGGELAKKLKKRETEPFDAKRNVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0062388_1017351092	3300004635	Bog Forest Soil	MTKKIKKCSSEADDTKRNVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMDAHARDEVMLGNLRC*
Ga0070683_1013161312	3300005329	Corn Rhizosphere	MGAGVAKKLKNRALDPEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070660_1010995601	3300005339	Corn Rhizosphere	LAKKSKKSTPALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070713_1005140012	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KKSKKSTPALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070679_1015390662	3300005530	Corn Rhizosphere	MGAGVAKKLKNRALEPEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070762_100969622	3300005602	Soil	MGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070763_107010351	3300005610	Soil	MGGELAKKSKKSAVAPIGTRQPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGI
Ga0068852_1024600772	3300005616	Corn Rhizosphere	ALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070764_108186511	3300005712	Soil	KKSKKSVAALTDTRRPVGALNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0070766_105715532	3300005921	Soil	SKKSAAALIDARRPVGALNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0075028_1009032802	3300006050	Watersheds	LAKKLKKHLPVPEDRKRPVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0075029_1001933222	3300006052	Watersheds	LAKKSKKRAPEPEEAKPHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0075017_1006097421	3300006059	Watersheds	GQLAKKSKKRAPEPEEAKPHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0075019_109166772	3300006086	Watersheds	LAKKSKKRASEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIF
Ga0079222_118806701	3300006755	Agricultural Soil	KRALEIEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0075434_1009554002	3300006871	Populus Rhizosphere	MGAGVAKKLKKRALEIEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0075424_1019425762	3300006904	Populus Rhizosphere	FAADSSMGAGVAKKLKKRALEIEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0105240_100657062	3300009093	Corn Rhizosphere	MGADVAKKLKKRAIDLEDHKPHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0116129_10048595	3300009633	Peatland	MGGELAKKSKKSAVAPIDRRQPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0116135_12585432	3300009665	Peatland	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFNVRS*
Ga0116217_103349951	3300009700	Peatlands Soil	YFSRRNQVWGRGVAKKLKKRAPEPEDTTRRVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVEP*
Ga0123355_116482422	3300009826	Termite Gut	YGGGGLAKKSKKSAPALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0116223_106098451	3300009839	Peatlands Soil	PEDTTRRVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVEP*
Ga0074044_103259861	3300010343	Bog Forest Soil	MFREGNQVWEGRLAKKSKKRAPEAEETKTHVGELNLSACEARRLYSICVELLELCAHVSGRIDPEAGYMVAHA*
Ga0074044_110248911	3300010343	Bog Forest Soil	MFREGNQVWEGRLAKKSKKRAPKPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0134128_125708961	3300010373	Terrestrial Soil	TMGEDVAKKLKKRAIDLEDHKPHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0134126_114514431	3300010396	Terrestrial Soil	KWIWGQNQVWGSRLSKKLKKRAPDLEDKKQHVGKLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0153951_10552762	3300011404	Attine Ant Fungus Gardens	MGGELAKKLKKREPEPFDAKRNVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0181531_101971512	3300014169	Bog	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCSHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0181526_108297612	3300014200	Bog	LAKKSKKRAPEPEEAKPRVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0181516_106144212	3300014655	Bog	MFSEGNQVWEGQLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0181522_110201321	3300014657	Bog	LAKKSKKRASEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS*
Ga0157376_107738972	3300014969	Miscanthus Rhizosphere	MAKKLKKSASELQVTKPQVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP*
Ga0182036_105055201	3300016270	Soil	VAKKVKKRAPELEDAKRNVGELSLSACEARRLYGICFELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFNSEP
Ga0182041_108511412	3300016294	Soil	LPKRVKAHEAESKGTSPHVGELKLSASEARRLYGIRVNLLELCSTVSGRIDPEAGRIVAHARDEVMLSVFDVRP
Ga0182034_112005152	3300016371	Soil	NKVWGRGVAKKVKKRAPELEDAKRNVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFNSEP
Ga0182039_120336081	3300016422	Soil	VAKKVKKRAPELEDTKRNVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFNSEP
Ga0187821_102469502	3300017936	Freshwater Sediment	VAKKLKNRALELEDPKRHVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0187879_102197721	3300017946	Peatland	KSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCSHVSGRIDPEAGYMVAHARDEVMLGIFNVRS
Ga0187879_104686801	3300017946	Peatland	KSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0187783_104253761	3300017970	Tropical Peatland	VRKKLRKRTPELEGTRALVGKLMLSGSEARRLYGVCVELLELCTHVSDRIDPQAAWMVAHARDDVKLEIFDVKP
Ga0187885_100778682	3300018025	Peatland	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0187863_100899232	3300018034	Peatland	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCSHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0187883_101460512	3300018037	Peatland	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCSHVSGRIDPEAGYMVAHARDEVMLGIFNVRS
Ga0187855_101231172	3300018038	Peatland	AKKSKKRAPEPEESKTHVGELNLSACEARTLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0187871_102988981	3300018042	Peatland	SKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0187851_106165782	3300018046	Peatland	LAKKLKKRVPEPEEAKPHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFNVRP
Ga0210407_101547282	3300020579	Soil	MGGELAKKSKKSAAALIYTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210407_105087761	3300020579	Soil	MGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210403_101031233	3300020580	Soil	MGGELAKKSKKSAAALIYTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVK
Ga0210395_111708101	3300020582	Soil	LAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210404_107204961	3300021088	Soil	AKKSKKSSPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210408_100680122	3300021178	Soil	MGGGLAKKSKKSSPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210388_115741332	3300021181	Soil	KLKKHAPEPEDSKRPVGELNLSACEARRLYGICVELLELCSRVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210393_110445102	3300021401	Soil	KKHALEPEDSKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210385_114467032	3300021402	Soil	LAKKLKKHAPEPEDSKRPVGELNLSACEARRLYGICVELLELCSRVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210397_107831012	3300021403	Soil	MGGGLAKKLKKREPEPEDTKRNVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210389_101355933	3300021404	Soil	MGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIF
Ga0210387_102999272	3300021405	Soil	MGGGLAKKSKKSAAALIDARRPVGALNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210386_105089191	3300021406	Soil	LAKKLKKHAPEPEDSKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210383_103820021	3300021407	Soil	VFREGEQVWEGQLAKKSKKHASEPEDGKIHVGELNLSACEARRLYSICVELLELCTHVSGKIDPEAGYMVAHARDEVMLGIFDARP
Ga0213878_103910242	3300021444	Bulk Soil	KKRAPESEDTRANVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210390_106097691	3300021474	Soil	GGELAKKSKKSAAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0210398_101450824	3300021477	Soil	MGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVML
Ga0224712_104396732	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	SSMGAGVAKKLKNRALEPEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP
Ga0242658_11763421	3300022530	Soil	GVKYGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0242654_102560172	3300022726	Soil	MGGGLGKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0207699_102796382	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGVGLTKKSKKSAPALLESKRPVGELNQSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0207695_100617405	3300025913	Corn Rhizosphere	MGADVAKKLKKRAIDLEDHKPHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP
Ga0207671_106647901	3300025914	Corn Rhizosphere	MGAGVAKKLKNRALEPEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGKIDPQAGWMVAHARDEVMLGIFDVKP
Ga0207671_109689342	3300025914	Corn Rhizosphere	LAKKSKKSTAALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0207702_113934612	3300026078	Corn Rhizosphere	LAKKSKKSTPALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIF
Ga0208098_10064681	3300027172	Forest Soil	IKLALKRESSMGGGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209218_10048162	3300027505	Forest Soil	MRNQVWGGGLAKKLKKHAPEPEDTRRNVRELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209525_11430012	3300027575	Forest Soil	MGGELVKKSKKSVAALTDTRRPVGALNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209221_10519053	3300027609	Forest Soil	MGGELAKKSKKSAVAPIDRRQPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209330_10704552	3300027619	Forest Soil	MGGGLAKKSKKSAPALIDTKRTVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209420_10799492	3300027648	Forest Soil	MGGGLAKKSKKSAAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209009_11008122	3300027667	Forest Soil	MGGGLAKKSKKSAPALIDTKRPAGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209038_100580651	3300027737	Bog Forest Soil	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0209656_101864202	3300027812	Bog Forest Soil	MAKRSKAREPETTVAKPNVGELSLSACEARRLYCVCVELLELCCHISGRIDPAAGWMVAHARDEVMIGIFGVRP
Ga0209039_103244832	3300027825	Bog Forest Soil	LAKKSKKRAPEPEEAKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPKAGYMVAHARDEVMLGIFDVRS
Ga0209773_104105441	3300027829	Bog Forest Soil	LAKKSKKRALEPAESKPHIGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMMAHARDEVMLGIFDVRS
Ga0209624_100081006	3300027895	Forest Soil	MGGELAKKSKKSAAALIDTRQPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209006_103975352	3300027908	Forest Soil	MGGELAKKSKKSAATLIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209006_109427311	3300027908	Forest Soil	RHQTGFEGGSQVWGANLAKKSKKSAAALIDTRRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0209168_104052252	3300027986	Surface Soil	MGAGVAKKLKNRALEPEDSKRHVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0302301_11411162	3300028731	Palsa	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0302231_102453002	3300028775	Palsa	EGPLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0302232_101083502	3300028789	Palsa	LAKKSKKRAPQPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0302226_101465541	3300028801	Palsa	GPLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFNVRS
Ga0302230_104052271	3300028871	Palsa	EGRLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0308309_108363171	3300028906	Soil	MGSGLAKKSKKSAPALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0311370_106881103	3300030503	Palsa	AKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0302317_104165402	3300030677	Palsa	LAKKSKKRAPQPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEV
Ga0075399_106393352	3300030967	Soil	MGGGVTKKLKKRSSESEDTKQDIGKLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0170834_1132950022	3300031057	Forest Soil	MGGGVTKKLKKRSSESEDTKQDIGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0170822_169259472	3300031122	Forest Soil	GGVTKKLKKRSSESEDTKQDIGKLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0302325_120782342	3300031234	Palsa	RQQTGFRGGVKYWGVGLAKKEKKSAPALIDAKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0302324_1027405052	3300031236	Palsa	LAKKLKRHLPVPEDIKRPVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0170820_165613191	3300031446	Forest Soil	MEPSMGGGVTKKLKKRSSESEDTKQDIGKLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0170818_1026198021	3300031474	Forest Soil	KKSKKSAPALIDTKRPVGELNLSACEARRLCGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0302326_114521822	3300031525	Palsa	RLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0310686_1003740342	3300031708	Soil	LAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFNVRS
Ga0310686_1112233442	3300031708	Soil	APALIDTKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0308175_1000866553	3300031938	Soil	MGGELAKKSKKNSPAIIDAKRPVGELNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0310916_113183731	3300031942	Soil	VAKKVKKRAPELEDAKRNVGELSLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFNSEP
Ga0308176_115494311	3300031996	Soil	PALIDTKRPVGQLNLSACEARRLYGICVELLELCSHVSGRIDPQAGWMVAHARDEVMLGIFDVKP
Ga0335081_112559922	3300032892	Soil	LAKKSKKRSPKHEESNPQVADKAHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRP
Ga0335071_109300922	3300032897	Soil	LAKKSKKRDPEPEEAKAHAGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDAVMLGIFDVRP
Ga0335076_100048903	3300032955	Soil	MFRARNQVWEGRLAKKSKKRSPKHEESNPQVADKAHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRP
Ga0335076_100104111	3300032955	Soil	KRTPKPEEAKTTAVDKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRP
Ga0335073_108709012	3300033134	Soil	KSKKRTPKPEEAKTTAVDKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRP
Ga0335073_113350981	3300033134	Soil	RARNQVWEGRLAKKSKKVAAKPEEAKTHVGELNLSACEARRLYSICIELLELCTHVSGRIDPEAGYMVAHARDEVMLGIFDVRS
Ga0334854_161072_264_524	3300033829	Soil	MFSEGNQVWEGRLAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS
Ga0370515_0022395_1524_1748	3300034163	Untreated Peat Soil	MAKKSKKRAPEPEESKTHVGELNLSACEARRLYSICVELLELCTHVSGRIDPQAGYMVAHARDEVMLGIFDVRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences